Pregenerated sensors for CLEC2I (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030365Ensembl transcript IDs: ENSMUST00000032519.12, ENSMUST00000159866.8, ENSMUST00000160867.3, ENSMUST00000162666.4
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTACAGATGTTTGTAAGACACCATGTGGTTGCTCAGATGTGAACTaGGAACATGCAGAAGAGCAGTCAGTGCTCTTAACTATTGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: ITDVCKTPCGCSDVN*EHAEEQSVLLTIEQ Trigger: TTGCTCAATAGTTAAGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCAACCACATGGTGTCTTACAAACATCTGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| 3UTR-3UTR TCA 90 bp | CTTAAAGACCTGGAGGCCTCCCATAGATATCAACCGCGCCCCACACAGCATATCTCCCAGAAGAGGACATaGGATGTCATTACAGATGTT | + |
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Preference number: 2 (lower is better) Translates to: LKDLEASHRYQPRPTQHISQKRT*DVITDV Trigger: AACATCTGTAATGACATCTCATGTCCTCTTCTGGGA...GATATGCTGTGTGGGGCGCGGTTGATATCTATGGGAGGCCTCCAGGTCTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| 3UTR-3UTR CCA 90 bp | GACACCATGTGGTTGCTCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTCATTTGATAGCACTGTaGGACCATAGGGGAAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: DTMWLLRCELGTCRRAVSHLIAL*DHRGKS Trigger: ACTTTTTCCCCTATGGTCCCACAGTGCTATCAAATG...ACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCAACCACATGGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| 3UTR-3UTR TCA 90 bp | TACCTGGGATTGCAGATGCTTCTCACTATCCCAGCCATTCTGCTTACATTATTAGTGGTTGCTCAGATGTaGACTGGGAACATGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: YLGLQMLLTIPAILLTLLVVAQM*TGNMQK Trigger: CTTCTGCATGTTCCCAGTTCACATCTGAGCAACCAC...TAATAATGTAAGCAGAATGGCTGGGATAGTGAGAAGCATCTGCAATCCCAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| 3UTR-3UTR TCA 90 bp | TATAGTGTACCTGTTTTCACACATCCCAGAAGAGGACATGAGATGTCATTACAGGTGGTTGCTCAGATGTaGACTGGGAACATGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: YSVPVFTHPRRGHEMSLQVVAQM*TGNMQK Trigger: CTTCTGCATGTTCCCAGTTCACATCTGAGCAACCAC...CTGTAATGACATCTCATGTCCTCTTCTGGGATGTGTGAAAACAGGTACACTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| 3UTR-3UTR CCA 90 bp | TACCTGGGATTGCAGATGCTTCTCACTATCCCAGCCATTCTGCTTACATTATTATGCTCAGATGTGAACTaGGAACATGCAGAAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: YLGLQMLLTIPAILLTLLCSDVN*EHAEEQ Trigger: CTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCA...TAATAATGTAAGCAGAATGGCTGGGATAGTGAGAAGCATCTGCAATCCCAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| 3UTR-3UTR GCA 90 bp | TATAGTGTACCTGTTTTCACACATCCCAGAAGAGGACATGAGATGTCATTACAGTGTGAACTGGGAACATaGAGAAGAGCAGTCAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: YSVPVFTHPRRGHEMSLQCELGT*RRAVSA Trigger: AGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACA...CTGTAATGACATCTCATGTCCTCTTCTGGGATGTGTGAAAACAGGTACACTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| 3UTR-3UTR GCA 90 bp | AGAAGAGGACATGAGATGTCATTACAGATGTTTGTAAGACACCATGTGGTTGCTTGTGAACTGGGAACATaGAGAAGAGCAGTCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: RRGHEMSLQMFVRHHVVACELGT*RRAVSA Trigger: AGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACA...AGCAACCACATGGTGTCTTACAAACATCTGTAATGACATCTCATGTCCTCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| 3UTR-3UTR CCA 90 bp | TGCTCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTGCTCTTAACTATTCATTTGATAGCACTGTaGGACCATAGGGGAAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: CSDVNWEHAEEQSVLLTIHLIAL*DHRGKS Trigger: ACTTTTTCCCCTATGGTCCCACAGTGCTATCAAATG...AATAGTTAAGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAGGACATGAGATGTCATTACAGATGTTTGTAAGACACCATGTGGTTGCTCATTTGATAGCACTGTaGGACCATAGGGGAAAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RRGHEMSLQMFVRHHVVAHLIAL*DHRGKS Trigger: ACTTTTTCCCCTATGGTCCCACAGTGCTATCAAATG...AGCAACCACATGGTGTCTTACAAACATCTGTAATGACATCTCATGTCCTCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGCTTACATTATTAAAGGACACCTCACGTTGGGGACTCATTTTTGTAGTCCATTTGATAGCACTGTaGGACCATAGGGGAAAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: ILLTLLKDTSRWGLIFVVHLIAL*DHRGKS Trigger: ACTTTTTCCCCTATGGTCCCACAGTGCTATCAAATG...GACTACAAAAATGAGTCCCCAACGTGAGGTGTCCTTTAATAATGTAAGCAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| 3UTR CCA 72 bp | GAACCTGAGACCCTCCTGTGTCAACCCTTAGGTACCTaGGATTGCAGATGCTTCTCACTATCCCAGCCATTC | + |
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Preference number: 3 (lower is better) Translates to: EPETLLCQPLGT*DCRCFSLSQPF Trigger: GAATGGCTGGGATAGTGAGAAGCATCTGCAATCCCAGGTACCTAAGGGTTGACACAGGAGGGTCTCAGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| 3UTR GCA 72 bp | GAGACCCTCCTGTGTCAACCCTTAGGTACCTGGGATTaGAGATGCTTCTCACTATCCCAGCCATTCTGCTTA | + |
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Preference number: 3 (lower is better) Translates to: ETLLCQPLGTWD*RCFSLSQPFCL Trigger: TAAGCAGAATGGCTGGGATAGTGAGAAGCATCTGCAATCCCAGGTACCTAAGGGTTGACACAGGAGGGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| 3UTR CCA 72 bp | TTCCTCCATTTCTCCATATCTTTCTCCTTAAAGACCTaGAGGCCTCCCATAGATATCAACCGCGCCCCACAC | + |
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Preference number: 3 (lower is better) Translates to: FLHFSISFSLKT*RPPIDINRAPH Trigger: GTGTGGGGCGCGGTTGATATCTATGGGAGGCCTCCAGGTCTTTAAGGAGAAAGATATGGAGAAATGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| 3UTR TCA 72 bp | CAGATGTTTGTAAGACACCATGTGGTTGCTCAGATGTaGACTGGGAACATGCAGAAGAGCAGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QMFVRHHVVAQM*TGNMQKSSQCS Trigger: AGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCAACCACATGGTGTCTTACAAACATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| 3UTR GCA 72 bp | CTCCTGTGTCAACCCTTAGGTACCTGGGATTGCAGATaGTTCTCACTATCCCAGCCATTCTGCTTACATTAT | + |
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Preference number: 3 (lower is better) Translates to: LLCQPLGTWDCR*FSLSQPFCLHY Trigger: ATAATGTAAGCAGAATGGCTGGGATAGTGAGAAGCATCTGCAATCCCAGGTACCTAAGGGTTGACACAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| 3UTR CCA 72 bp | GTTTGTAAGACACCATGTGGTTGCTCAGATGTGAACTaGGAACATGCAGAAGAGCAGTCAGTGCTCTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: VCKTPCGCSDVN*EHAEEQSVLLT Trigger: AGTTAAGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCAACCACATGGTGTCTTACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| 3UTR-3UTR CAA 90 bp | TCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTGCTCTTAACTATTGAGTATTCTCAATCCCATTaGATAGCACTGTGGGACCAT | + |
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Preference number: 3 (lower is better) Translates to: SDVNWEHAEEQSVLLTIEYSQSH*IALWDH Trigger: ATGGTCCCACAGTGCTATCAAATGGGATTGAGAATA...CTCAATAGTTAAGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| 3UTR TCA 72 bp | GGAACATGCAGAAGAGCAGTCAGTGCTCTTAACTATTaGGCAATCTCTCTAGCCTCGATTGTTTTCATTTGT | + |
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Preference number: 3 (lower is better) Translates to: GTCRRAVSALNY*AISLASIVFIC Trigger: ACAAATGAAAACAATCGAGGCTAGAGAGATTGCTCAATAGTTAAGAGCACTGACTGCTCTTCTGCATGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| 3UTR-3UTR CAA 90 bp | AGAAGAGGACATGAGATGTCATTACAGATGTTTGTAAGACACCATGTGGTTGCTTATTCTCAATCCCATTaGATAGCACTGTGGGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: RRGHEMSLQMFVRHHVVAYSQSH*IALWDH Trigger: ATGGTCCCACAGTGCTATCAAATGGGATTGAGAATA...AGCAACCACATGGTGTCTTACAAACATCTGTAATGACATCTCATGTCCTCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS-3UTR GCA 90 bp | CTTAAAGACCTGGAGGCCTCCCATAGATATCAACCGCGCCCCACACAGCATATCTCTGACGACTCTCTGTaGAGGCCAATCCAGCAATCA | + |
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Preference number: 4 (lower is better) Translates to: LKDLEASHRYQPRPTQHISDDSL*RPIQQS Trigger: TGATTGCTGGATTGGCCTGCACAGAGAGTCGTCAGA...GATATGCTGTGTGGGGCGCGGTTGATATCTATGGGAGGCCTCCAGGTCTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| CDS-3UTR CCA 90 bp | GACACCATGTGGTTGCTCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTTCCATTGCCCTCTTCTaGCTTCTGTACACACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: DTMWLLRCELGTCRRAVSSIALF*LLYTLG Trigger: GCCCAGTGTGTACAGAAGCCAGAAGAGGGCAATGGA...ACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCAACCACATGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000162666.4 |
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| CDS-3UTR TCA 90 bp | CTTAAAGACCTGGAGGCCTCCCATAGATATCAACCGCGCCCCACACAGCATATCGGAGGTTATAGTTGTTaGGCTTGCTACAGATCCACA | + |
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Preference number: 4 (lower is better) Translates to: LKDLEASHRYQPRPTQHIGGYSC*ACYRST Trigger: TGTGGATCTGTAGCAAGCTCAACAACTATAACCTCC...GATATGCTGTGTGGGGCGCGGTTGATATCTATGGGAGGCCTCCAGGTCTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| CDS-3UTR GCA 90 bp | GACACCATGTGGTTGCTCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTTTCCAAGGGGTCCATTaGCCTCTTCTGGCTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: DTMWLLRCELGTCRRAVSFQGVH*PLLASV Trigger: TACAGAAGCCAGAAGAGGGCAATGGACCCCTTGGAA...ACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCAACCACATGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000162666.4 |
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| CDS-3UTR TCA 90 bp | GACACCATGTGGTTGCTCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTGGAGGTTATAGTTGTTaGGCTTGCTACAGATCCACA | + |
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Preference number: 4 (lower is better) Translates to: DTMWLLRCELGTCRRAVSGGYSC*ACYRST Trigger: TGTGGATCTGTAGCAAGCTCAACAACTATAACCTCC...ACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCAACCACATGGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS-3UTR CCA 90 bp | TCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTGCTCTTAACTATTGAGGAAGGGGGAGTGCTGTaGGAGCAGTTTTTCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SDVNWEHAEEQSVLLTIEEGGVL*EQFFSC Trigger: ACAGGAGAAAAACTGCTCCCACAGCACTCCCCCTTC...CTCAATAGTTAAGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162666.4 |
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| CDS-3UTR GCA 90 bp | TCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTGCTCTTAACTATTGAGTTCCAAGGGGTCCATTaGCCTCTTCTGGCTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: SDVNWEHAEEQSVLLTIEFQGVH*PLLASV Trigger: TACAGAAGCCAGAAGAGGGCAATGGACCCCTTGGAA...CTCAATAGTTAAGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000162666.4 |
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| CDS-3UTR CCA 90 bp | GACACCATGTGGTTGCTCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTGGCTTCTGTACACACTaGGCATTCATGTTATGTACA | + |
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Preference number: 4 (lower is better) Translates to: DTMWLLRCELGTCRRAVSGFCTH*AFMLCT Trigger: TGTACATAACATGAATGCCCAGTGTGTACAGAAGCC...ACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCAACCACATGGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000162666.4 |
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| CDS-3UTR CCA 90 bp | AGAAGAGGACATGAGATGTCATTACAGATGTTTGTAAGACACCATGTGGTTGCTTCCATTGCCCTCTTCTaGCTTCTGTACACACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RRGHEMSLQMFVRHHVVASIALF*LLYTLG Trigger: GCCCAGTGTGTACAGAAGCCAGAAGAGGGCAATGGA...AGCAACCACATGGTGTCTTACAAACATCTGTAATGACATCTCATGTCCTCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000162666.4 |
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| CDS-3UTR CCA 90 bp | AGAAGAGGACATGAGATGTCATTACAGATGTTTGTAAGACACCATGTGGTTGCTAAAAGCTTGGAGGTTTaGGGAAGGGGGAGTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RRGHEMSLQMFVRHHVVAKSLEV*GRGSAV Trigger: CACAGCACTCCCCCTTCCCCAAACCTCCAAGCTTTT...AGCAACCACATGGTGTCTTACAAACATCTGTAATGACATCTCATGTCCTCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162666.4 |
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| CDS-3UTR TCA 90 bp | TGCTCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTGCTCTTAACTATTGGAGGTTATAGTTGTTaGGCTTGCTACAGATCCACA | + |
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Preference number: 4 (lower is better) Translates to: CSDVNWEHAEEQSVLLTIGGYSC*ACYRST Trigger: TGTGGATCTGTAGCAAGCTCAACAACTATAACCTCC...AATAGTTAAGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS-3UTR GCA 90 bp | AGAAGAGGACATGAGATGTCATTACAGATGTTTGTAAGACACCATGTGGTTGCTTTCCAAGGGGTCCATTaGCCTCTTCTGGCTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: RRGHEMSLQMFVRHHVVAFQGVH*PLLASV Trigger: TACAGAAGCCAGAAGAGGGCAATGGACCCCTTGGAA...AGCAACCACATGGTGTCTTACAAACATCTGTAATGACATCTCATGTCCTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000162666.4 |
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| CDS-3UTR GCA 90 bp | AGAAGAGGACATGAGATGTCATTACAGATGTTTGTAAGACACCATGTGGTTGCTTCTGACGACTCTCTGTaGAGGCCAATCCAGCAATCA | + |
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Preference number: 4 (lower is better) Translates to: RRGHEMSLQMFVRHHVVASDDSL*RPIQQS Trigger: TGATTGCTGGATTGGCCTGCACAGAGAGTCGTCAGA...AGCAACCACATGGTGTCTTACAAACATCTGTAATGACATCTCATGTCCTCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS-3UTR CCA 90 bp | TCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTGCTCTTAACTATTGAGGGCTTCTGTACACACTaGGCATTCATGTTATGTACA | + |
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Preference number: 4 (lower is better) Translates to: SDVNWEHAEEQSVLLTIEGFCTH*AFMLCT Trigger: TGTACATAACATGAATGCCCAGTGTGTACAGAAGCC...CTCAATAGTTAAGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000162666.4 |
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| CDS-3UTR TCA 90 bp | TATAGTGTACCTGTTTTCACACATCCCAGAAGAGGACATGAGATGTCATTACAGGGAGGTTATAGTTGTTaGGCTTGCTACAGATCCACA | + |
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Preference number: 4 (lower is better) Translates to: YSVPVFTHPRRGHEMSLQGGYSC*ACYRST Trigger: TGTGGATCTGTAGCAAGCTCAACAACTATAACCTCC...CTGTAATGACATCTCATGTCCTCTTCTGGGATGTGTGAAAACAGGTACACTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS-3UTR CCA 90 bp | ATTCTGCTTACATTATTAAAGGACACCTCACGTTGGGGACTCATTTTTGTAGTCGGCTTCTGTACACACTaGGCATTCATGTTATGTACA | + |
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Preference number: 4 (lower is better) Translates to: ILLTLLKDTSRWGLIFVVGFCTH*AFMLCT Trigger: TGTACATAACATGAATGCCCAGTGTGTACAGAAGCC...GACTACAAAAATGAGTCCCCAACGTGAGGTGTCCTTTAATAATGTAAGCAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| CDS CCA 90 bp | CTCTTTAGGAAAATCAGCTCCTCCTCGTTGTCAAACCGAGCTAGTTaGGCCTCTTGTGCCATGCAGAAGGCCTGGGCAAATGTCCAGTTA | + |
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Preference number: 5 (lower is better) Translates to: LFRKISSSSLSNRAS*ASCAMQKAWANVQL Trigger: TAACTGGACATTTGCCCAGGCCTTCTGCATGGCACAAGAGGCCCAACTAGCTCGGTTTGACAACGAGGAGGAGCTGATTTTCCTAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS CCA 90 bp | CCAGTTCCAAGGGGTCCATTGCCCTCTTCTGGCTTCTGTACACACTaGGCATTCATGTTATGTACAAACCTGATACCCGTGTCCTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: PVPRGPLPSSGFCTH*AFMLCTNLIPVSLG Trigger: TCCCAAGGACACGGGTATCAGGTTTGTACATAACATGAATGCCCAGTGTGTACAGAAGCCAGAAGAGGGCAATGGACCCCTTGGAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162666.4 |
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| CDS GCA 90 bp | TCAGTGTTGTTTGTCCACTTCCAAGGGTGCTCTGACGACTCTCTGTaGAGGCCAATCCAGCAATCAAAATCCCCCTTGAATCTCTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: SVLFVHFQGCSDDSL*RPIQQSKSPLNLFR Trigger: CCTAAAGAGATTCAAGGGGGATTTTGATTGCTGGATTGGCCTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAAACAACACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS-3UTR CAA 90 bp | TCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTGCTCTTAACTATTGAGGTTCCAAGGGGTCCATaGCCCTCTTCTGGCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SDVNWEHAEEQSVLLTIEVPRGP*PSSGFC Trigger: ACAGAAGCCAGAAGAGGGCAATGGACCCCTTGGAAC...CTCAATAGTTAAGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000162666.4 |
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| CDS TCA 90 bp | CATGTTGTTATACTCAGTGTTGTTTGTCCACTTCCAAGGGTGCTCTaGCGACTCTCTGTGCAGGCCAATCCAGCAATCAAAATCCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: HVVILSVVCPLPRVL*RLSVQANPAIKIPL Trigger: AAGGGGGATTTTGATTGCTGGATTGGCCTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAAACAACACTGAGTATAACAACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS CCA 90 bp | CCAGTTCCAAGGGGTCCATTGCCCTCTTCTGGCTTCTGTACACACTaGGCATTCATGTTATGTACAAACAGTTTTTCTCCTGTCTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: PVPRGPLPSSGFCTH*AFMLCTNSFSPVSK Trigger: CTTGGAGACAGGAGAAAAACTGTTTGTACATAACATGAATGCCCAGTGTGTACAGAAGCCAGAAGAGGGCAATGGACCCCTTGGAACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 |
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| CDS GCA 90 bp | GGATTCATGTTGTTATACTCAGTGTTGTTTGTCCACTTCCAAGGGTaGTCTGACGACTCTCTGTGCAGGCCAATCCAGCAATCAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: GFMLLYSVLFVHFQG*SDDSLCRPIQQSKS Trigger: GGATTTTGATTGCTGGATTGGCCTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAAACAACACTGAGTATAACAACATGAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS GCA 90 bp | GGACAATTTTACAACATTGCACACCTCCAGTTCCAAGGGGTCCATTaGCCTCTTCTGGCTTCTGTACACACTGGGCATTCATGTTATGTA | + |
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Preference number: 5 (lower is better) Translates to: GQFYNIAHLQFQGVH*PLLASVHTGHSCYV Trigger: TACATAACATGAATGCCCAGTGTGTACAGAAGCCAGAAGAGGGCAATGGACCCCTTGGAACTGGAGGTGTGCAATGTTGTAAAATTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159866.8 ENSMUST00000162666.4 |
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| CDS-3UTR CAA 90 bp | AGAAGAGGACATGAGATGTCATTACAGATGTTTGTAAGACACCATGTGGTTGCTGTTCCAAGGGGTCCATaGCCCTCTTCTGGCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: RRGHEMSLQMFVRHHVVAVPRGP*PSSGFC Trigger: ACAGAAGCCAGAAGAGGGCAATGGACCCCTTGGAAC...AGCAACCACATGGTGTCTTACAAACATCTGTAATGACATCTCATGTCCTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000162666.4 |
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| CDS TCA 90 bp | CTTCTGGCTTCTGTACACACTGGGCATTCATGTTATGTACAAACCTaGTACCCGTGTCCTTGGGAAGAGAGAAATTCCAAAAGCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LLASVHTGHSCYVQT*YPCPWEERNSKSLE Trigger: CTCCAAGCTTTTGGAATTTCTCTCTTCCCAAGGACACGGGTATCAGGTTTGTACATAACATGAATGCCCAGTGTGTACAGAAGCCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162666.4 |
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| CDS-3UTR CAA 90 bp | TCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTGCTCTTAACTATTGAGCTGATACCCGTGTCCTaGGGAAGAGAGAAATTCCAA | + |
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Preference number: 5 (lower is better) Translates to: SDVNWEHAEEQSVLLTIELIPVS*GREKFQ Trigger: TTGGAATTTCTCTCTTCCCAAGGACACGGGTATCAG...CTCAATAGTTAAGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162666.4 |
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| CDS CCA 90 bp | TTGGACAATTTTACCTCCAGTTCCAAGGGGTCCATTGCCCTCTTCTaGCTTCTGTACACACTGGGCATTCATGTTATGTACAAACAGTTT | + |
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Preference number: 5 (lower is better) Translates to: LDNFTSSSKGSIALF*LLYTLGIHVMYKQF Trigger: AAACTGTTTGTACATAACATGAATGCCCAGTGTGTACAGAAGCCAGAAGAGGGCAATGGACCCCTTGGAACTGGAGGTAAAATTGTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032519.12 |
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| CDS-3UTR CAA 90 bp | GACACCATGTGGTTGCTCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTTCTGAAACATTTTCCTaGGACAATTTTACCTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: DTMWLLRCELGTCRRAVSSETFS*DNFTSS Trigger: ACTGGAGGTAAAATTGTCCAAGGAAAATGTTTCAGA...ACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCAACCACATGGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032519.12 |
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| CDS-3UTR CAA 90 bp | TACCTGGGATTGCAGATGCTTCTCACTATCCCAGCCATTCTGCTTACATTATTACTCCAGTCCAGTTTTTaGAGCAAGCAGCATAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: YLGLQMLLTIPAILLTLLLQSSF*SKQHRS Trigger: AGACCTATGCTGCTTGCTCAAAAAACTGGACTGGAG...TAATAATGTAAGCAGAATGGCTGGGATAGTGAGAAGCATCTGCAATCCCAGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| CDS-3UTR CAA 90 bp | TGCTCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTGCTCTTAACTATTCTAGACAGGAGGAGTTaGGCAATGGAGGTTATAGTT | + |
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Preference number: 5 (lower is better) Translates to: CSDVNWEHAEEQSVLLTILDRRS*AMEVIV Trigger: AACTATAACCTCCATTGCCAAACTCCTCCTGTCTAG...AATAGTTAAGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS-3UTR CAA 90 bp | AGAAGAGGACATGAGATGTCATTACAGATGTTTGTAAGACACCATGTGGTTGCTAGAAATTCCAAAAGCTaGGAGGTTTGGGGAAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: RRGHEMSLQMFVRHHVVARNSKS*EVWGRG Trigger: CCCCCTTCCCCAAACCTCCAAGCTTTTGGAATTTCT...AGCAACCACATGGTGTCTTACAAACATCTGTAATGACATCTCATGTCCTCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162666.4 |
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| CDS-3UTR CAA 90 bp | TATAGTGTACCTGTTTTCACACATCCCAGAAGAGGACATGAGATGTCATTACAGCTCCAGTCCAGTTTTTaGAGCAAGCAGCATAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: YSVPVFTHPRRGHEMSLQLQSSF*SKQHRS Trigger: AGACCTATGCTGCTTGCTCAAAAAACTGGACTGGAG...CTGTAATGACATCTCATGTCCTCTTCTGGGATGTGTGAAAACAGGTACACTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS-3UTR CAA 90 bp | TGCTCAGATGTGAACTGGGAACATGCAGAAGAGCAGTCAGTGCTCTTAACTATTTTGTTATACTCAGTGTaGTTTGTCCACTTCCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: CSDVNWEHAEEQSVLLTILLYSV*FVHFQG Trigger: CCCTTGGAAGTGGACAAACAACACTGAGTATAACAA...AATAGTTAAGAGCACTGACTGCTCTTCTGCATGTTCCCAGTTCACATCTGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS-3UTR CAA 90 bp | CCTGGGATTGCAGATGCTTCTCACTATCCCAGCCATTCTGCTTACATTATTAAACTAGACAGGAGGAGTTaGGCAATGGAGGTTATAGTT | + |
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Preference number: 5 (lower is better) Translates to: PGIADASHYPSHSAYIIKLDRRS*AMEVIV Trigger: AACTATAACCTCCATTGCCAAACTCCTCCTGTCTAG...TTTAATAATGTAAGCAGAATGGCTGGGATAGTGAGAAGCATCTGCAATCCCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| CDS-3UTR CAA 90 bp | CCTGGGATTGCAGATGCTTCTCACTATCCCAGCCATTCTGCTTACATTATTAAATTGTTATACTCAGTGTaGTTTGTCCACTTCCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: PGIADASHYPSHSAYIIKLLYSV*FVHFQG Trigger: CCCTTGGAAGTGGACAAACAACACTGAGTATAACAA...TTTAATAATGTAAGCAGAATGGCTGGGATAGTGAGAAGCATCTGCAATCCCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159866.8 |
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| CDS-3UTR CAA 90 bp | AGAAGAGGACATGAGATGTCATTACAGATGTTTGTAAGACACCATGTGGTTGCTTTGTTATACTCAGTGTaGTTTGTCCACTTCCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: RRGHEMSLQMFVRHHVVALLYSV*FVHFQG Trigger: CCCTTGGAAGTGGACAAACAACACTGAGTATAACAA...AGCAACCACATGGTGTCTTACAAACATCTGTAATGACATCTCATGTCCTCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS CCA 72 bp | AAAATCAGCTCCTCCTCGTTGTCAAACCGAGCTAGTTaGGCCTCTTGTGCCATGCAGAAGGCCTGGGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: KISSSSLSNRAS*ASCAMQKAWAN Trigger: ATTTGCCCAGGCCTTCTGCATGGCACAAGAGGCCCAACTAGCTCGGTTTGACAACGAGGAGGAGCTGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS GCA 72 bp | TTTGTCCACTTCCAAGGGTGCTCTGACGACTCTCTGTaGAGGCCAATCCAGCAATCAAAATCCCCCTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: FVHFQGCSDDSL*RPIQQSKSPLN Trigger: ATTCAAGGGGGATTTTGATTGCTGGATTGGCCTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS CCA 72 bp | AGGGGTCCATTGCCCTCTTCTGGCTTCTGTACACACTaGGCATTCATGTTATGTACAAACCTGATACCCGTG | + |
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Preference number: 6 (lower is better) Translates to: RGPLPSSGFCTH*AFMLCTNLIPV Trigger: CACGGGTATCAGGTTTGTACATAACATGAATGCCCAGTGTGTACAGAAGCCAGAAGAGGGCAATGGACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162666.4 |
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| CDS CCA 72 bp | TTTACCTCCAGTTCCAAGGGGTCCATTGCCCTCTTCTaGCTTCTGTACACACTGGGCATTCATGTTATGTAC | + |
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Preference number: 6 (lower is better) Translates to: FTSSSKGSIALF*LLYTLGIHVMY Trigger: GTACATAACATGAATGCCCAGTGTGTACAGAAGCCAGAAGAGGGCAATGGACCCCTTGGAACTGGAGGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032519.12 |
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| CDS CAA 90 bp | ACACACTGGGCATTCATGTTATGTACAAACCTGATACCCGTGTCCTaGGGAAGAGAGAAATTCCAAAAGCTTGGAGGTTTGGGGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: THWAFMLCTNLIPVS*GREKFQKLGGLGKG Trigger: CCCCTTCCCCAAACCTCCAAGCTTTTGGAATTTCTCTCTTCCCAAGGACACGGGTATCAGGTTTGTACATAACATGAATGCCCAGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162666.4 |
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| CDS TCA 72 bp | AGATCCACATCCGATTTATATAGCTCCTCGAACTGCTaGTCCTATCGCTGCTCAGGTAGGCATATCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: RSTSDLYSSSNC*SYRCSGRHIFP Trigger: TGGGAAGATATGCCTACCTGAGCAGCGATAGGATCAGCAGTTCGAGGAGCTATATAAATCGGATGTGGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS CCA 72 bp | CGCTGCTCAGGTAGGCATATCTTCCCACTCCTAGGATaGGATTCATGTTGTTATACTCAGTGTTGTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RCSGRHIFPLLG*DSCCYTQCCLS Trigger: GGACAAACAACACTGAGTATAACAACATGAATCCCATCCTAGGAGTGGGAAGATATGCCTACCTGAGCAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS CAA 72 bp | CTAGGATGGGATTCATGTTGTTATACTCAGTGTTGTTaGTCCACTTCCAAGGGTGCTCTGACGACTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LGWDSCCYTQCC*STSKGALTTLC Trigger: ACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAAACAACACTGAGTATAACAACATGAATCCCATCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS CAA 72 bp | ACTCCTAGGATGGGATTCATGTTGTTATACTCAGTGTaGTTTGTCCACTTCCAAGGGTGCTCTGACGACTCT | + |
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Preference number: 6 (lower is better) Translates to: TPRMGFMLLYSV*FVHFQGCSDDS Trigger: AGAGTCGTCAGAGCACCCTTGGAAGTGGACAAACAACACTGAGTATAACAACATGAATCCCATCCTAGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032519.12 ENSMUST00000159866.8 ENSMUST00000160867.3 ENSMUST00000162666.4 |
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| CDS TCA 72 bp | TCTGTACACACTGGGCATTCATGTTATGTACAAACCTaGTACCCGTGTCCTTGGGAAGAGAGAAATTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: SVHTGHSCYVQT*YPCPWEERNSK Trigger: TTTGGAATTTCTCTCTTCCCAAGGACACGGGTATCAGGTTTGTACATAACATGAATGCCCAGTGTGTACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162666.4 |
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| CDS CAA 72 bp | GCATTCATGTTATGTACAAACCTGATACCCGTGTCCTaGGGAAGAGAGAAATTCCAAAAGCTTGGAGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: AFMLCTNLIPVS*GREKFQKLGGL Trigger: CAAACCTCCAAGCTTTTGGAATTTCTCTCTTCCCAAGGACACGGGTATCAGGTTTGTACATAACATGAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162666.4 |
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| CDS CCA 72 bp | GGAGACACAGTGGAGATGATTCTGAAACATTTTCCTTaGACAATTTTACAACATTGCACACCTCCAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: GDTVEMILKHFP*TILQHCTPPVP Trigger: TGGAACTGGAGGTGTGCAATGTTGTAAAATTGTCCAAGGAAAATGTTTCAGAATCATCTCCACTGTGTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159866.8 ENSMUST00000162666.4 |
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| CDS CAA 72 bp | AGGAGACACAGTGGAGATGATTCTGAAACATTTTCCTaGGACAATTTTACAACATTGCACACCTCCAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RRHSGDDSETFS*DNFTTLHTSSS Trigger: GGAACTGGAGGTGTGCAATGTTGTAAAATTGTCCAAGGAAAATGTTTCAGAATCATCTCCACTGTGTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159866.8 ENSMUST00000162666.4 |
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