Pregenerated sensors for CLEC2H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030364Ensembl transcript IDs: ENSMUST00000032518.7, ENSMUST00000204416.2, ENSMUST00000205225.3
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGACCTCGGAATGCCACTTGTCCACACACCCCAACTCCCGCGGGCTaGGGTTCTCTGGCTTCCCACAGCCAGACACCCACCCGGGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: RPRNATCPHTPTPAG*GSLASHSQTPTRGH Trigger: GTGGCCCCGGGTGGGTGTCTGGCTGTGGGAAGCCAGAGAACCCCAGCCCGCGGGAGTTGGGGTGTGTGGACAAGTGGCATTCCGAGGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR TCA 90 bp | GGGTTCTCTGGCTTCCCACAGCCAGACACCCACCCGGGGCCACGTTaGAAGTTTGCAGCAGTACTCCTGAGTATGGCCGCCCAGAGCACC | + |
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Preference number: 1 (lower is better) Translates to: GFSGFPQPDTHPGPR*KFAAVLLSMAAQST Trigger: GGTGCTCTGGGCGGCCATACTCAGGAGTACTGCTGCAAACTTTCAACGTGGCCCCGGGTGGGTGTCTGGCTGTGGGAAGCCAGAGAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR GCA 90 bp | TGGCTTCCCACAGCCAGACACCCACCCGGGGCCACGTTGAAAGTTTaGAGCAGTACTCCTGAGTATGGCCGCCCAGAGCACCAGTACTCT | + |
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Preference number: 1 (lower is better) Translates to: WLPTARHPPGATLKV*SSTPEYGRPEHQYS Trigger: AGAGTACTGGTGCTCTGGGCGGCCATACTCAGGAGTACTGCTGCAAACTTTCAACGTGGCCCCGGGTGGGTGTCTGGCTGTGGGAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR TCA 90 bp | TGTCTGGGATGCTCGAGACGGAGAACCTGTTATCTCTGGCATCCATaGGGCTCAGAGACCTCGGAATGCCACTTGTCCACACACCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: CLGCSRRRTCYLWHP*GSETSECHLSTHPN Trigger: GTTGGGGTGTGTGGACAAGTGGCATTCCGAGGTCTCTGAGCCTCATGGATGCCAGAGATAACAGGTTCTCCGTCTCGAGCATCCCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR CCA 90 bp | GGCTCCCACTTTGTCCTTAGCTCTTTCACAGTGTCCAACGGTGTCTaGGATGCTCGAGACGGAGAACCTGTTATCTCTGGCATCCATGAG | + |
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Preference number: 1 (lower is better) Translates to: GSHFVLSSFTVSNGV*DARDGEPVISGIHE Trigger: CTCATGGATGCCAGAGATAACAGGTTCTCCGTCTCGAGCATCCCAGACACCGTTGGACACTGTGAAAGAGCTAAGGACAAAGTGGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR CCA 90 bp | ATGTGCTTAGCACAGGAAGTAAGATCAATATCAATAAATAGTGCTTaGCCATCCCCAGGACCAAAGGGAGGAGACAGCAGGGGGCGAGGC | + |
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Preference number: 1 (lower is better) Translates to: MCLAQEVRSISINSA*PSPGPKGGDSRGRG Trigger: GCCTCGCCCCCTGCTGTCTCCTCCCTTTGGTCCTGGGGATGGCCAAGCACTATTTATTGATATTGATCTTACTTCCTGTGCTAAGCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR GCA 90 bp | TCAGTGTTGTCTGTCCATATCCAAGGGTGCTGTGTTGATGCTCTGTaGAGGCCAATCCAGTGGTCAGAAGTCCCCTTGTATCTCTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: SVLSVHIQGCCVDAL*RPIQWSEVPLYLFR Trigger: TCTGAAGAGATACAAGGGGACTTCTGACCACTGGATTGGCCTGCACAGAGCATCAACACAGCACCCTTGGATATGGACAGACAACACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CCA 90 bp | CCTGGAGCTAGAGTTACAAATAGATGTGAGCTGCCACATGGGTGCTaGGAACTGAACTGTGTTCCTCTGGAAGAGCAGCCAATGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: PGARVTNRCELPHGC*ELNCVPLEEQPMLL Trigger: TAAGAGCATTGGCTGCTCTTCCAGAGGAACACAGTTCAGTTCCCAGCACCCATGTGGCAGCTCACATCTATTTGTAACTCTAGCTCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR TCA 90 bp | GTTGCTATATTCAGTGTTGTCTGTCCATATCCAAGGGTGCTGTGTTaGTGCTCTGTGCAGGCCAATCCAGTGGTCAGAAGTCCCCTTGTA | + |
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Preference number: 1 (lower is better) Translates to: VAIFSVVCPYPRVLC*CSVQANPVVRSPLV Trigger: TACAAGGGGACTTCTGACCACTGGATTGGCCTGCACAGAGCATCAACACAGCACCCTTGGATATGGACAGACAACACTGAATATAGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CCA 90 bp | TCCAGCCACTTGGGCATGCGGTGTAGCAAGGTTCACGGTCTTCCATaGCTGGGATTTTATTTCTCACTGACAAAGCAACTGAAAGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: SSHLGMRCSKVHGLP*LGFYFSLTKQLKEQ Trigger: TTGCTCTTTCAGTTGCTTTGTCAGTGAGAAATAAAATCCCAGCCATGGAAGACCGTGAACCTTGCTACACCGCATGCCCAAGTGGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR GCA 90 bp | ACGTACAAGTTGCTATATTCAGTGTTGTCTGTCCATATCCAAGGGTaGTGTGTTGATGCTCTGTGCAGGCCAATCCAGTGGTCAGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: TYKLLYSVLSVHIQG*CVDALCRPIQWSEV Trigger: GACTTCTGACCACTGGATTGGCCTGCACAGAGCATCAACACAGCACCCTTGGATATGGACAGACAACACTGAATATAGCAACTTGTACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CCA 90 bp | CATATCCAAGGGTGCTGTGTTGATGCTCTGTGCAGGCCAATCCAGTaGTCAGAAGTCCCCTTGTATCTCTTCAGAAAATTCTGTCCAACT | + |
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Preference number: 1 (lower is better) Translates to: HIQGCCVDALCRPIQ*SEVPLYLFRKFCPT Trigger: AGTTGGACAGAATTTTCTGAAGAGATACAAGGGGACTTCTGACCACTGGATTGGCCTGCACAGAGCATCAACACAGCACCCTTGGATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR TCA 90 bp | GAAACAGTGCTAGATGGGAATTTGATGCTACGCAGGAGGACTGACTaGAGGTCCAGTTTCCCATGTCTTCAGAAAAATAAAAGCATTTAC | + |
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Preference number: 1 (lower is better) Translates to: ETVLDGNLMLRRRTD*RSSFPCLQKNKSIY Trigger: GTAAATGCTTTTATTTTTCTGAAGACATGGGAAACTGGACCTTCAGTCAGTCCTCCTGCGTAGCATCAAATTCCCATCTAGCACTGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR TCA 90 bp | TGTATCTCTTCAGAAAATTCTGTCCAACTCTGGCTTGGAAGTCCATaGTTTATGATGTCCTTGCCATTTTTAATAGATGCCTCGTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: CISSENSVQLWLGSP*FMMSLPFLIDASFS Trigger: ACTGAACGAGGCATCTATTAAAAATGGCAAGGACATCATAAATCATGGACTTCCAAGCCAGAGTTGGACAGAATTTTCTGAAGAGATACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR GCA 90 bp | CTTGCCATTTTTAATAGATGCCTCGTTCAGTATGCAACATGTGAATaGTTGGAGAAAAGCTTACATGACCACATGGTATCTCTTCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: LAIFNRCLVQYATCE*LEKSLHDHMVSLQK Trigger: TTTCTGAAGAGATACCATGTGGTCATGTAAGCTTTTCTCCAAGCATTCACATGTTGCATACTGAACGAGGCATCTATTAAAAATGGCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CAA 90 bp | GGGGTTCTCTGGCTTCCCACAGCCAGACACCCACCCGGGGCCACGTaGAAAGTTTGCAGCAGTACTCCTGAGTATGGCCGCCCAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: GVLWLPTARHPPGAT*KVCSSTPEYGRPEH Trigger: GTGCTCTGGGCGGCCATACTCAGGAGTACTGCTGCAAACTTTCAACGTGGCCCCGGGTGGGTGTCTGGCTGTGGGAAGCCAGAGAACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR-3UTR GCA 90 bp | GGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGTCGTCTCTCCAGTTCCAACGGTGTCTGGGATaGTCGAGACGGAGAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: GPLEEQSVLLTTESSLQFQRCLG*SRRRTC Trigger: ACAGGTTCTCCGTCTCGAGCATCCCAGACACCGTTG...GAACTGGAGAGACGACTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR-3UTR CCA 90 bp | GGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGTCGTCTCTCCAGTTCCTGCCACATGGGTGCTaGGAACTGAACTGTGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: GPLEEQSVLLTTESSLQFLPHGC*ELNCVP Trigger: AGGAACACAGTTCAGTTCCCAGCACCCATGTGGCAG...GAACTGGAGAGACGACTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR CAA 90 bp | AGAGCACCAGTACTCTGGCGGGACTCAGGTTGTCTCCTACTCAGGTaGTCCGGTGCCCAACACTCCTCTAAACTAATTTTCATCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: RAPVLWRDSGCLLLR*SGAQHSSKLIFILA Trigger: AGCCAAGATGAAAATTAGTTTAGAGGAGTGTTGGGCACCGGACAACCTGAGTAGGAGACAACCTGAGTCCCGCCAGAGTACTGGTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR-3UTR TCA 90 bp | TTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGTCGTCTATGGGTGCTGGGAACTaGACTGTGTTCCTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LNSGPLEEQSVLLTTESSMGAGN*TVFLWK Trigger: CTTCCAGAGGAACACAGTTCAGTTCCCAGCACCCAT...AGACGACTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR CAA 90 bp | AGTTGCTATATTCAGTGTTGTCTGTCCATATCCAAGGGTGCTGTGTaGATGCTCTGTGCAGGCCAATCCAGTGGTCAGAAGTCCCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: SCYIQCCLSISKGAV*MLCAGQSSGQKSPC Trigger: ACAAGGGGACTTCTGACCACTGGATTGGCCTGCACAGAGCATCAACACAGCACCCTTGGATATGGACAGACAACACTGAATATAGCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGTCCCCTTGTATCTCTTCAGAAAATTCTGTCCAACTCTGGCTTGGAAGTGTTCACGGTCTTCCATaGCTGGGATTTTATTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: QKSPCISSENSVQLWLGSVHGLP*LGFYFS Trigger: TGAGAAATAAAATCCCAGCCATGGAAGACCGTGAAC...ACTTCCAAGCCAGAGTTGGACAGAATTTTCTGAAGAGATACAAGGGGACTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CAA 90 bp | GAGCAGCCAATGCTCTTAACAGCAGAGTCTCCAGCCCCTGGACACTaGATGTTTGATAAAGAATCTATAAATACACACCAGATAAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: EQPMLLTAESPAPGH*MFDKESINTHQIKS Trigger: GCTTTTTATCTGGTGTGTATTTATAGATTCTTTATCAAACATCAAGTGTCCAGGGGCTGGAGACTCTGCTGTTAAGAGCATTGGCTGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGGTTCACGGTCTTCCATGGCTGGGATTTTATTTCTCACTGACAAAGCAAAGGAAAATTAATAACTaGCATCCTGCCTTGTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SKVHGLPWLGFYFSLTKQRKINN*HPALLE Trigger: CTCCAACAAGGCAGGATGGCAGTTATTAATTTTCCT...TTGCTTTGTCAGTGAGAAATAAAATCCCAGCCATGGAAGACCGTGAACCTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR-3UTR TCA 90 bp | GTCTCTCCAGTTCTGTGCACTGATGTTTTACCTGTATGTGTGTCTGTGTTACAGTCTTGGCTGTCAATGTaGTTATTGCTGGATTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: VSPVLCTDVLPVCVSVLQSWLSM*LLLDFD Trigger: ATCAAAATCCAGCAATAATCACATTGACAGCCAAGA...CTGTAACACAGACACACATACAGGTAAAACATCAGTGCACAGAACTGGAGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR-3UTR TCA 90 bp | GAAAACGTACAAGTTGCTATATTCAGTGTTGTCTGTCCATATCCAAGGGTGCTGTCAGTATGCAACATGTaGATGCTTGGAGAAAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: ENVQVAIFSVVCPYPRVLSVCNM*MLGEKL Trigger: AAGCTTTTCTCCAAGCATTCACATGTTGCATACTGA...CAGCACCCTTGGATATGGACAGACAACACTGAATATAGCAACTTGTACGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CCA 72 bp | AATGCCACTTGTCCACACACCCCAACTCCCGCGGGCTaGGGTTCTCTGGCTTCCCACAGCCAGACACCCACC | + |
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Preference number: 3 (lower is better) Translates to: NATCPHTPTPAG*GSLASHSQTPT Trigger: GGTGGGTGTCTGGCTGTGGGAAGCCAGAGAACCCCAGCCCGCGGGAGTTGGGGTGTGTGGACAAGTGGCATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR TCA 72 bp | GGCTTCCCACAGCCAGACACCCACCCGGGGCCACGTTaGAAGTTTGCAGCAGTACTCCTGAGTATGGCCGCC | + |
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Preference number: 3 (lower is better) Translates to: GFPQPDTHPGPR*KFAAVLLSMAA Trigger: GGCGGCCATACTCAGGAGTACTGCTGCAAACTTTCAACGTGGCCCCGGGTGGGTGTCTGGCTGTGGGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR GCA 72 bp | ACAGCCAGACACCCACCCGGGGCCACGTTGAAAGTTTaGAGCAGTACTCCTGAGTATGGCCGCCCAGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: TARHPPGATLKV*SSTPEYGRPEH Trigger: GTGCTCTGGGCGGCCATACTCAGGAGTACTGCTGCAAACTTTCAACGTGGCCCCGGGTGGGTGTCTGGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR-3UTR CAA 90 bp | AAAAATTGTCCAAGCTGCCCCCTGGGCTCCCACTTTGTCCTTAGCTCTTTCACACCACCCGGGGCCACGTaGAAAGTTTGCAGCAGTACT | + |
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Preference number: 3 (lower is better) Translates to: KNCPSCPLGSHFVLSSFTPPGAT*KVCSST Trigger: AGTACTGCTGCAAACTTTCAACGTGGCCCCGGGTGG...TGTGAAAGAGCTAAGGACAAAGTGGGAGCCCAGGGGGCAGCTTGGACAATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR TCA 72 bp | CAGGAGATTGTATGCCTGGCCAGCTCCTCCAGGCTGTaGAACAGTGCTAGATGGGAATTTGATGCTACGCAG | + |
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Preference number: 3 (lower is better) Translates to: QEIVCLASSSRL*NSARWEFDATQ Trigger: CTGCGTAGCATCAAATTCCCATCTAGCACTGTTTCACAGCCTGGAGGAGCTGGCCAGGCATACAATCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR TCA 72 bp | CAAATAGATGTGAGCTGCCACATGGGTGCTGGGAACTaGACTGTGTTCCTCTGGAAGAGCAGCCAATGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QIDVSCHMGAGN*TVFLWKSSQCS Trigger: AGAGCATTGGCTGCTCTTCCAGAGGAACACAGTTCAGTTCCCAGCACCCATGTGGCAGCTCACATCTATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR GCA 72 bp | TCTGTCCATATCCAAGGGTGCTGTGTTGATGCTCTGTaGAGGCCAATCCAGTGGTCAGAAGTCCCCTTGTAT | + |
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Preference number: 3 (lower is better) Translates to: SVHIQGCCVDAL*RPIQWSEVPLY Trigger: ATACAAGGGGACTTCTGACCACTGGATTGGCCTGCACAGAGCATCAACACAGCACCCTTGGATATGGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CCA 72 bp | TTTGTCCTTAGCTCTTTCACAGTGTCCAACGGTGTCTaGGATGCTCGAGACGGAGAACCTGTTATCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: FVLSSFTVSNGV*DARDGEPVISG Trigger: GCCAGAGATAACAGGTTCTCCGTCTCGAGCATCCCAGACACCGTTGGACACTGTGAAAGAGCTAAGGACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR TCA 72 bp | TTCAGTGTTGTCTGTCCATATCCAAGGGTGCTGTGTTaGTGCTCTGTGCAGGCCAATCCAGTGGTCAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: FSVVCPYPRVLC*CSVQANPVVRS Trigger: ACTTCTGACCACTGGATTGGCCTGCACAGAGCATCAACACAGCACCCTTGGATATGGACAGACAACACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR GCA 72 bp | GCTAGAGTTACAAATAGATGTGAGCTGCCACATGGGTaGTGGGAACTGAACTGTGTTCCTCTGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: ARVTNRCELPHG*WELNCVPLEEQ Trigger: CTGCTCTTCCAGAGGAACACAGTTCAGTTCCCAGCACCCATGTGGCAGCTCACATCTATTTGTAACTCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR CCA 72 bp | AGAGTTACAAATAGATGTGAGCTGCCACATGGGTGCTaGGAACTGAACTGTGTTCCTCTGGAAGAGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: RVTNRCELPHGC*ELNCVPLEEQP Trigger: TGGCTGCTCTTCCAGAGGAACACAGTTCAGTTCCCAGCACCCATGTGGCAGCTCACATCTATTTGTAACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR TCA 72 bp | AGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTaGGTCGTCTCTCCAGTTCTGTGCACTGATGTTTTA | + |
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Preference number: 3 (lower is better) Translates to: RTSGRAVSALNH*VVSPVLCTDVL Trigger: TAAAACATCAGTGCACAGAACTGGAGAGACGACTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR GCA 72 bp | TTGCTATATTCAGTGTTGTCTGTCCATATCCAAGGGTaGTGTGTTGATGCTCTGTGCAGGCCAATCCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: LLYSVLSVHIQG*CVDALCRPIQW Trigger: CCACTGGATTGGCCTGCACAGAGCATCAACACAGCACCCTTGGATATGGACAGACAACACTGAATATAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CCA 72 bp | TTGGGCATGCGGTGTAGCAAGGTTCACGGTCTTCCATaGCTGGGATTTTATTTCTCACTGACAAAGCAACTG | + |
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Preference number: 3 (lower is better) Translates to: LGMRCSKVHGLP*LGFYFSLTKQL Trigger: CAGTTGCTTTGTCAGTGAGAAATAAAATCCCAGCCATGGAAGACCGTGAACCTTGCTACACCGCATGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CCA 72 bp | ATCTCTTCAGAAAACCTCTTCAGGAGATTGTATGCCTaGCCAGCTCCTCCAGGCTGTGAAACAGTGCTAGAT | + |
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Preference number: 3 (lower is better) Translates to: ISSENLFRRLYA*PAPPGCETVLD Trigger: ATCTAGCACTGTTTCACAGCCTGGAGGAGCTGGCCAGGCATACAATCTCCTGAAGAGGTTTTCTGAAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR-3UTR CAA 90 bp | TGGGCTCCCACTTTGTCCTTAGCTCTTTCACAGTGTCCAACGGTGTCTGGGATGTTTTTGATAATGGTTTaGGTTGATCAGGAGCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: WAPTLSLALSQCPTVSGMFLIMV*VDQEQS Trigger: GCTCTGCTCCTGATCAACCAAAACCATTATCAAAAA...CATCCCAGACACCGTTGGACACTGTGAAAGAGCTAAGGACAAAGTGGGAGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR TCA 72 bp | GACATAGGATCCTCATTTTATGTGGTTGGTAGGAATTaGACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: DIGSSFYVVGRN*TQDLWKSSQCS Trigger: AGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCTACCAACCACATAAAATGAGGATCCTATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR TCA 72 bp | AGTGCTAGATGGGAATTTGATGCTACGCAGGAGGACTaGCTGAAGGTCCAGTTTCCCATGTCTTCAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: SARWEFDATQED*LKVQFPMSSEK Trigger: TTTTTCTGAAGACATGGGAAACTGGACCTTCAGTCAGTCCTCCTGCGTAGCATCAAATTCCCATCTAGCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR TCA 72 bp | CTAGATGGGAATTTGATGCTACGCAGGAGGACTGACTaGAGGTCCAGTTTCCCATGTCTTCAGAAAAATAAA | + |
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Preference number: 3 (lower is better) Translates to: LDGNLMLRRRTD*RSSFPCLQKNK Trigger: TTTATTTTTCTGAAGACATGGGAAACTGGACCTTCAGTCAGTCCTCCTGCGTAGCATCAAATTCCCATCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR-3UTR CAA 90 bp | GAAAACGTACAAGTTGCTATATTCAGTGTTGTCTGTCCATATCCAAGGGTGCTGGCAACATGTGAATGCTaGGAGAAAAGCTTACATGAC | + |
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Preference number: 3 (lower is better) Translates to: ENVQVAIFSVVCPYPRVLATCEC*EKSLHD Trigger: GTCATGTAAGCTTTTCTCCAAGCATTCACATGTTGC...CAGCACCCTTGGATATGGACAGACAACACTGAATATAGCAACTTGTACGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR-3UTR CAA 90 bp | ATGCTCTTAACAGCAGAGTCTCCAGCCCCTGGACACTTGATGTTTGATAAAGAAAGAGTCTCATCTTTTTaGAGAATTCCATACGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: MLLTAESPAPGHLMFDKERVSSF*RIPYVC Trigger: ACACACGTATGGAATTCTCAAAAAAGATGAGACTCT...TTCTTTATCAAACATCAAGTGTCCAGGGGCTGGAGACTCTGCTGTTAAGAGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR-3UTR CAA 90 bp | GTCATTCATCTCTTACAGATACAACTCACACATTTCACAGCAAATAAACACAGTGTGCTAGATGGGAATTaGATGCTACGCAGGAGGACT | + |
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Preference number: 3 (lower is better) Translates to: VIHLLQIQLTHFTANKHSVLDGN*MLRRRT Trigger: AGTCCTCCTGCGTAGCATCAAATTCCCATCTAGCAC...ACTGTGTTTATTTGCTGTGAAATGTGTGAGTTGTATCTGTAAGAGATGAATGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CCA 72 bp | CATGTGAATGCTTGGAGAAAAGCTTACATGACCACATaGTATCTCTTCAGAAAACCTCTTCAGGAGATTGTA | + |
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Preference number: 3 (lower is better) Translates to: HVNAWRKAYMTT*YLFRKPLQEIV Trigger: TACAATCTCCTGAAGAGGTTTTCTGAAGAGATACCATGTGGTCATGTAAGCTTTTCTCCAAGCATTCACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR TCA 72 bp | TCAGAAAATTCTGTCCAACTCTGGCTTGGAAGTCCATaGTTTATGATGTCCTTGCCATTTTTAATAGATGCC | + |
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Preference number: 3 (lower is better) Translates to: SENSVQLWLGSP*FMMSLPFLIDA Trigger: GGCATCTATTAAAAATGGCAAGGACATCATAAATCATGGACTTCCAAGCCAGAGTTGGACAGAATTTTCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CCA 72 bp | TCATACTTATCACTCTGTACCAAACTTAGTTCGACATaGACCAAAGACTTCAGTATAAAACCAGATACACTA | + |
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Preference number: 3 (lower is better) Translates to: SYLSLCTKLSST*TKDFSIKPDTL Trigger: TAGTGTATCTGGTTTTATACTGAAGTCTTTGGTCCATGTCGAACTAAGTTTGGTACAGAGTGATAAGTATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR TCA 90 bp | GCCACTTGTCCACACACCCCAACTCCCGCGGGCTGGGGTTCTCTGGCTTCCCACGGCAGTCTGCAGCAGTaGGGTCTGCCCTCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ATCPHTPTPAGWGSLASHGSLQQ*GLPSAA Trigger: TGCTGCAGAGGGCAGACCTCACTGCTGCAGACTGCC...GTGGGAAGCCAGAGAACCCCAGCCCGCGGGAGTTGGGGTGTGTGGACAAGTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR TCA 90 bp | GCCACTTGTCCACACACCCCAACTCCCGCGGGCTGGGGTTCTCTGGCTTCCCACCTCCTCCTCCTCTCGTaGGAACCAAGTTGCTATATT | + |
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Preference number: 4 (lower is better) Translates to: ATCPHTPTPAGWGSLASHLLLLS*EPSCYI Trigger: AATATAGCAACTTGGTTCTCACGAGAGGAGGAGGAG...GTGGGAAGCCAGAGAACCCCAGCCCGCGGGAGTTGGGGTGTGTGGACAAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR TCA 90 bp | TCTTCAGAAAACCTCTTCAGGAGATTGTATGCCTGGCCAGCTCCTCCAGGCTGTGGCAGTCTGCAGCAGTaGGGTCTGCCCTCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SSENLFRRLYAWPAPPGCGSLQQ*GLPSAA Trigger: TGCTGCAGAGGGCAGACCTCACTGCTGCAGACTGCC...ACAGCCTGGAGGAGCTGGCCAGGCATACAATCTCCTGAAGAGGTTTTCTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| CDS-3UTR GCA 90 bp | TGGGCTCCCACTTTGTCCTTAGCTCTTTCACAGTGTCCAACGGTGTCTGGGATGCTCCTGCAGGCAGTCTaGAGCAGTGAGGTCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: WAPTLSLALSQCPTVSGMLLQAV*SSEVCP Trigger: AGGGCAGACCTCACTGCTGCAGACTGCCTGCAGGAG...CATCCCAGACACCGTTGGACACTGTGAAAGAGCTAAGGACAAAGTGGGAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR GCA 90 bp | CCAGCTCCTCCAGGCTGTGAAACAGTGCTAGATGGGAATTTGATGCTACGCAGGTGCAGCAGTGAGGTCTaGCCTCTGCAGCATGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: PAPPGCETVLDGNLMLRRCSSEV*PLQHAH Trigger: ATGGGCATGCTGCAGAGGGCAGACCTCACTGCTGCA...CCTGCGTAGCATCAAATTCCCATCTAGCACTGTTTCACAGCCTGGAGGAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| CDS-3UTR CCA 90 bp | TCGGAATGCCACTTGTCCACACACCCCAACTCCCGCGGGCTGGGGTTCTCTGGCGTTCACGGTCTTCCATaGCTGGGATTTTATTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: SECHLSTHPNSRGLGFSGVHGLP*LGFYFS Trigger: TGAGAAATAAAATCCCAGCCATGGAAGACCGTGAAC...GCCAGAGAACCCCAGCCCGCGGGAGTTGGGGTGTGTGGACAAGTGGCATTCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR CCA 90 bp | TCCATGAGGCTCAGAGACCTCGGAATGCCACTTGTCCACACACCCCAACTCCCGTGCAGGCCAATCCAGTaGTCAGAAGTCCCCTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: SMRLRDLGMPLVHTPQLPCRPIQ*SEVPLY Trigger: ATACAAGGGGACTTCTGACCACTGGATTGGCCTGCA...CGGGAGTTGGGGTGTGTGGACAAGTGGCATTCCGAGGTCTCTGAGCCTCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR CCA 90 bp | GAAAACCTCTTCAGGAGATTGTATGCCTGGCCAGCTCCTCCAGGCTGTGAAACAGCTGAAGGGCATTGCTaGCCCATTTCTCCCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ENLFRRLYAWPAPPGCETAEGHC*PISPSC Trigger: GCAGGAGGGAGAAATGGGCCAGCAATGCCCTTCAGC...TGTTTCACAGCCTGGAGGAGCTGGCCAGGCATACAATCTCCTGAAGAGGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CAA 72 bp | GGAAAAATTGTCCAAGCTGCCCCCTGGGCTCCCACTTaGTCCTTAGCTCTTTCACAGTGTCCAACGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GKIVQAAPWAPT*SLALSQCPTVS Trigger: AGACACCGTTGGACACTGTGAAAGAGCTAAGGACAAAGTGGGAGCCCAGGGGGCAGCTTGGACAATTTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR TCA 90 bp | TTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGTCGTCTAGCTCCTGCCACTGCTaGTCCCATTATCACTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LNSGPLEEQSVLLTTESSSSCHC*SHYHSG Trigger: TCCTGAGTGATAATGGGATCAGCAGTGGCAGGAGCT...AGACGACTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR GCA 90 bp | CAGAAGTCCCCTTGTATCTCTTCAGAAAATTCTGTCCAACTCTGGCTTGGAAGTCTCCTGCAGGCAGTCTaGAGCAGTGAGGTCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: QKSPCISSENSVQLWLGSLLQAV*SSEVCP Trigger: AGGGCAGACCTCACTGCTGCAGACTGCCTGCAGGAG...ACTTCCAAGCCAGAGTTGGACAGAATTTTCTGAAGAGATACAAGGGGACTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| CDS-3UTR GCA 90 bp | GTCTCTCCAGTTCTGTGCACTGATGTTTTACCTGTATGTGTGTCTGTGTTACAGTGCAGCAGTGAGGTCTaGCCTCTGCAGCATGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: VSPVLCTDVLPVCVSVLQCSSEV*PLQHAH Trigger: ATGGGCATGCTGCAGAGGGCAGACCTCACTGCTGCA...CTGTAACACAGACACACATACAGGTAAAACATCAGTGCACAGAACTGGAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR CAA 72 bp | CCACATGGTATCTCTTCAGAAAACCTCTTCAGGAGATaGTATGCCTGGCCAGCTCCTCCAGGCTGTGAAACA | + |
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Preference number: 4 (lower is better) Translates to: PHGISSENLFRR*YAWPAPPGCET Trigger: TGTTTCACAGCCTGGAGGAGCTGGCCAGGCATACAATCTCCTGAAGAGGTTTTCTGAAGAGATACCATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| 3UTR CAA 72 bp | ATTCAGTGTTGTCTGTCCATATCCAAGGGTGCTGTGTaGATGCTCTGTGCAGGCCAATCCAGTGGTCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: IQCCLSISKGAV*MLCAGQSSGQK Trigger: CTTCTGACCACTGGATTGGCCTGCACAGAGCATCAACACAGCACCCTTGGATATGGACAGACAACACTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| CDS-3UTR TCA 90 bp | ATGCTCTTAACAGCAGAGTCTCCAGCCCCTGGACACTTGATGTTTGATAAAGAACCAAGGGTGCTGTGTTaGTGCTCTGTGCAGGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: MLLTAESPAPGHLMFDKEPRVLC*CSVQAN Trigger: ATTGGCCTGCACAGAGCATCAACACAGCACCCTTGG...TTCTTTATCAAACATCAAGTGTCCAGGGGCTGGAGACTCTGCTGTTAAGAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR GCA 90 bp | ATGCTCTTAACAGCAGAGTCTCCAGCCCCTGGACACTTGATGTTTGATAAAGAATGTGTTGATGCTCTGTaGAGGCCAATCCAGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: MLLTAESPAPGHLMFDKECVDAL*RPIQWS Trigger: TGACCACTGGATTGGCCTGCACAGAGCATCAACACA...TTCTTTATCAAACATCAAGTGTCCAGGGGCTGGAGACTCTGCTGTTAAGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGAACTGAACTGTGTTCCTCTGGAAGAGCAGCCAATGCTCTTAACAGCTGGATTTACAACTACTaGCAAACTTGCTACAAATCC | + |
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Preference number: 4 (lower is better) Translates to: VLGTELCSSGRAANALNSWIYNY*QTCYKS Trigger: GGATTTGTAGCAAGTTTGTCAGTAGTTGTAAATCCA...GCTGTTAAGAGCATTGGCTGCTCTTCCAGAGGAACACAGTTCAGTTCCCAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR CAA 72 bp | ATGCTCTTAACAGCAGAGTCTCCAGCCCCTGGACACTaGATGTTTGATAAAGAATCTATAAATACACACCAG | + |
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Preference number: 4 (lower is better) Translates to: MLLTAESPAPGH*MFDKESINTHQ Trigger: CTGGTGTGTATTTATAGATTCTTTATCAAACATCAAGTGTCCAGGGGCTGGAGACTCTGCTGTTAAGAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| 3UTR CAA 72 bp | AATAGATGCCTCGTTCAGTATGCAACATGTGAATGCTaGGAGAAAAGCTTACATGACCACATGGTATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NRCLVQYATCEC*EKSLHDHMVSL Trigger: AAGAGATACCATGTGGTCATGTAAGCTTTTCTCCAAGCATTCACATGTTGCATACTGAACGAGGCATCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| CDS GCA 90 bp | CTGGCCCATTTCTCCCTCCTGCAGGCAGTCTGCAGCAGTGAGGTCTaGCCTCTGCAGCATGCCCATGGAACTCGTTTCAACCTTTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LAHFSLLQAVCSSEV*PLQHAHGTRFNLCS Trigger: GCTGCAAAGGTTGAAACGAGTTCCATGGGCATGCTGCAGAGGGCAGACCTCACTGCTGCAGACTGCCTGCAGGAGGGAGAAATGGGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205225.3 |
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| CDS GCA 90 bp | TTTACCCATTTCTCCCTCCTGCAGGCAGTCTGCAGCAGTGAGGTCTaGCCTCTGCAGCATGCCCATGGAACTCGTTTCAACCTTTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: FTHFSLLQAVCSSEV*PLQHAHGTRFNLCS Trigger: GCTGCAAAGGTTGAAACGAGTTCCATGGGCATGCTGCAGAGGGCAGACCTCACTGCTGCAGACTGCCTGCAGGAGGGAGAAATGGGTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032518.7 ENSMUST00000204416.2 |
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| CDS-3UTR CAA 90 bp | GCCCCCTGGGCTCCCACTTTGTCCTTAGCTCTTTCACAGTGTCCAACGGTGTCTCTCGTGAGAACCAAGTaGCTATATTCAGTGTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: APWAPTLSLALSQCPTVSLVRTK*LYSVLS Trigger: AGACAACACTGAATATAGCAACTTGGTTCTCACGAG...AGACACCGTTGGACACTGTGAAAGAGCTAAGGACAAAGTGGGAGCCCAGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS CCA 90 bp | CATATCCAAGGGTGCTGTGTTGATGCTCTGTGCAGGCCAATCCAGTaGTCAGAAGTCCCCTTGTATCTCTTCAGAAAATTCAGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: HIQGCCVDALCRPIQ*SEVPLYLFRKFSSS Trigger: GGAGGAGCTGAATTTTCTGAAGAGATACAAGGGGACTTCTGACCACTGGATTGGCCTGCACAGAGCATCAACACAGCACCCTTGGATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS CCA 90 bp | CCCTTGTATCTCTTCAGAAAATTTTCCAAATCCAATCCAGCCACTTaGGCATGCGGTGTAGCAAGGTTCACGGTCTTCCATGGCTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: PLYLFRKFSKSNPAT*ACGVARFTVFHGWD Trigger: ATCCCAGCCATGGAAGACCGTGAACCTTGCTACACCGCATGCCCAAGTGGCTGGATTGGATTTGGAAAATTTTCTGAAGAGATACAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204416.2 |
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| CDS GCA 90 bp | AGAACCAAGTTGCTATATTCAGTGTTGTCTGTCCATATCCAAGGGTaGTGTGTTGATGCTCTGTGCAGGCCAATCCAGTGGTCAGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: RTKLLYSVLSVHIQG*CVDALCRPIQWSEV Trigger: GACTTCTGACCACTGGATTGGCCTGCACAGAGCATCAACACAGCACCCTTGGATATGGACAGACAACACTGAATATAGCAACTTGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGAACTGAACTGTGTTCCTCTGGAAGAGCAGCCAATGCTCTTAACAGCTGGTCAGAAGTCCCCTaGTATCTCTTCAGAAAATTC | + |
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Preference number: 5 (lower is better) Translates to: VLGTELCSSGRAANALNSWSEVP*YLFRKF Trigger: GAATTTTCTGAAGAGATACAAGGGGACTTCTGACCA...GCTGTTAAGAGCATTGGCTGCTCTTCCAGAGGAACACAGTTCAGTTCCCAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGAACTGAACTGTGTTCCTCTGGAAGAGCAGCCAATGCTCTTAACAGCCAACTACTGACAAACTaGCTACAAATCCACTTCCTA | + |
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Preference number: 5 (lower is better) Translates to: VLGTELCSSGRAANALNSQLLTN*LQIHFL Trigger: TAGGAAGTGGATTTGTAGCAAGTTTGTCAGTAGTTG...GCTGTTAAGAGCATTGGCTGCTCTTCCAGAGGAACACAGTTCAGTTCCCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR CAA 90 bp | GTCTCTCCAGTTCTGTGCACTGATGTTTTACCTGTATGTGTGTCTGTGTTACAGTTGCTATATTCAGTGTaGTCTGTCCATATCCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: VSPVLCTDVLPVCVSVLQLLYSV*SVHIQG Trigger: CCCTTGGATATGGACAGACAACACTGAATATAGCAA...CTGTAACACAGACACACATACAGGTAAAACATCAGTGCACAGAACTGGAGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS-3UTR CAA 90 bp | TACACACCAGATAAAAAGCCAGCATCTTCAACAAATGAAACTGGTGAAACTGATGTGCTAGATGGGAATTaGATGCTACGCAGGAGGACT | + |
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Preference number: 5 (lower is better) Translates to: YTPDKKPASSTNETGETDVLDGN*MLRRRT Trigger: AGTCCTCCTGCGTAGCATCAAATTCCCATCTAGCAC...ATCAGTTTCACCAGTTTCATTTGTTGAAGATGCTGGCTTTTTATCTGGTGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS GCA 72 bp | TTCTCCCTCCTGCAGGCAGTCTGCAGCAGTGAGGTCTaGCCTCTGCAGCATGCCCATGGAACTCGTTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: FSLLQAVCSSEV*PLQHAHGTRFN Trigger: GTTGAAACGAGTTCCATGGGCATGCTGCAGAGGGCAGACCTCACTGCTGCAGACTGCCTGCAGGAGGGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032518.7 ENSMUST00000204416.2 ENSMUST00000205225.3 |
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| CDS TCA 72 bp | TATCACTCAGGAAGCCACATTCTCCTCCTCCTCTCGTaGGAACCAAGTTGCTATATTCAGTGTTGTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: YHSGSHILLLLS*EPSCYIQCCLS Trigger: GGACAGACAACACTGAATATAGCAACTTGGTTCTCACGAGAGGAGGAGGAGAATGTGGCTTCCTGAGTGATA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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| CDS CCA 72 bp | CTCTTCAGAAAATTTTCCAAATCCAATCCAGCCACTTaGGCATGCGGTGTAGCAAGGTTCACGGTCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LFRKFSKSNPAT*ACGVARFTVFH Trigger: ATGGAAGACCGTGAACCTTGCTACACCGCATGCCCAAGTGGCTGGATTGGATTTGGAAAATTTTCTGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204416.2 |
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| CDS CAA 72 bp | TCTCTTCAGAAAATTTTCCAAATCCAATCCAGCCACTaGGGCATGCGGTGTAGCAAGGTTCACGGTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SLQKIFQIQSSH*GMRCSKVHGLP Trigger: TGGAAGACCGTGAACCTTGCTACACCGCATGCCCAAGTGGCTGGATTGGATTTGGAAAATTTTCTGAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204416.2 |
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| CDS TCA 72 bp | GCCTTGGTACACTTCCTACTCTGGATTTACAACTACTaGCAAACTTGCTACAAATCCACTTCCTATGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: ALVHFLLWIYNY*QTCYKSTSYVC Trigger: ACACACATAGGAAGTGGATTTGTAGCAAGTTTGTCAGTAGTTGTAAATCCAGAGTAGGAAGTGTACCAAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032518.7 |
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