Pregenerated sensors for CLEC2G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000248Ensembl transcript IDs: ENSMUST00000000254.14, ENSMUST00000075789.4, ENSMUST00000142388.8, ENSMUST00000203405.3, ENSMUST00000204259.3
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GGATGCAACAGACATCTCATCTTCCCTATCATTATTAAAGTGTTTTaGTGCTTTCCGTCCCCACTGGTGAACCTGAGACCCTCCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: GCNRHLIFPIIIKVF*CFPSPLVNLRPSCV Trigger: GACACAGGAGGGTCTCAGGTTCACCAGTGGGGACGGAAAGCACAAAAACACTTTAATAATGATAGGGAAGATGAGATGTCTGTTGCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTCTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTTGCGACCGTTTGATAGCACTGTaGGACCATAGGGGAAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: QSLNYGAISPALMVFICDRLIAL*DHRGKS Trigger: ACTTTTTCCCCTATGGTCCCACAGTGCTATCAAACG...GTCGCAAATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAGAGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| 3UTR-3UTR GCA 90 bp | TATTTAAAACTCATCTATGGTCTTGTAATCCTCCATGTGTGCACCTCTCTAAGGTGTGAACTCGGGACATaGAGAAGAGCAGTCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: YLKLIYGLVILHVCTSLRCELGT*RRAVSL Trigger: GAGACTGACTGCTCTTCTGCATGTCCCGAGTTCACA...CCTTAGAGAGGTGCACACATGGAGGATTACAAGACCATAGATGAGTTTTAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTACAGATGTTTGTATGTGAACTCGGGACATaGAGAAGAGCAGTCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: AVFTHHRRGHKMSLQMFVCELGT*RRAVSL Trigger: GAGACTGACTGCTCTTCTGCATGTCCCGAGTTCACA...TACAAACATCTGTAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTACAGATGTTTGTACAATCTCTCCAGCCTTaGTGGTTTTCATTTGCGACG | + |
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Preference number: 2 (lower is better) Translates to: AVFTHHRRGHKMSLQMFVQSLQP*WFSFAT Trigger: CGTCGCAAATGAAAACCATCAAGGCTGGAGAGATTG...TACAAACATCTGTAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| 3UTR-3UTR TCA 90 bp | TATAGTGTAGCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTACAGCAATCTCTCCAGCCTTaGTGGTTTTCATTTGCGACG | + |
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Preference number: 2 (lower is better) Translates to: YSVAVFTHHRRGHKMSLQQSLQP*WFSFAT Trigger: CGTCGCAAATGAAAACCATCAAGGCTGGAGAGATTG...CTGTAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGCTACACTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| 3UTR-3UTR CCA 90 bp | CATCTCATCTTCCCTATCATTATTAAAGTGTTTTTGTGCTTTCCGTCCCCACTGAGGTTACACCCATGTTaGGGGACTCATTTTTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: HLIFPIIIKVFLCFPSPLRLHPC*GTHFCG Trigger: ACCACAAAAATGAGTCCCCCAACATGGGTGTAACCT...CAGTGGGGACGGAAAGCACAAAAACACTTTAATAATGATAGGGAAGATGAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| 3UTR-3UTR CCA 90 bp | TATAGTGTAGCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTACAGCGTTTGATAGCACTGTaGGACCATAGGGGAAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: YSVAVFTHHRRGHKMSLQRLIAL*DHRGKS Trigger: ACTTTTTCCCCTATGGTCCCACAGTGCTATCAAACG...CTGTAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGCTACACTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| 3UTR-3UTR CCA 90 bp | CACAGAAGAGGACATAAGATGTCATTACAGATGTTTGTAAGACACCATGTGGTTCGTTTGATAGCACTGTaGGACCATAGGGGAAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: HRRGHKMSLQMFVRHHVVRLIAL*DHRGKS Trigger: ACTTTTTCCCCTATGGTCCCACAGTGCTATCAAACG...AACCACATGGTGTCTTACAAACATCTGTAATGACATCTTATGTCCTCTTCTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGCAGATCTCTGCAGATCCACAAAGATGAACTATCTTGTAGTGATTCTATATATTAAAGTGTTTTTGTaGTTTCCGTCCCCACTGGTG | + |
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Preference number: 2 (lower is better) Translates to: EADLCRSTKMNYLVVILYIKVFL*FPSPLV Trigger: CACCAGTGGGGACGGAAAGCACAAAAACACTTTAAT...ATATAGAATCACTACAAGATAGTTCATCTTTGTGGATCTGCAGAGATCTGCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| 3UTR CCA 72 bp | GAACCTGAGACCCTCCTGTGTCAACCCTTCGGTACCTaGGATTACAGATGCTTCTCAGGATCCCAGCCATTC | + |
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Preference number: 3 (lower is better) Translates to: EPETLLCQPFGT*DYRCFSGSQPF Trigger: GAATGGCTGGGATCCTGAGAAGCATCTGTAATCCCAGGTACCGAAGGGTTGACACAGGAGGGTCTCAGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTTTCTCCTTAAAGACCTGGAGGCCTCCCATGGATATCAACTCCCCCTTGGCAGAAACACTCCCCCTTaGAAGCAGATCTCTGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: PFLLKDLEASHGYQLPLGRNTPP*KQISAD Trigger: ATCTGCAGAGATCTGCTTCAAAGGGGGAGTGTTTCT...GCCAAGGGGGAGTTGATATCCATGGGAGGCCTCCAGGTCTTTAAGGAGAAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| 3UTR CCA 72 bp | TTCCTCCATTTCTCCATCCCTTTCTCCTTAAAGACCTaGAGGCCTCCCATGGATATCAACTCCCCCTTGGCA | + |
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Preference number: 3 (lower is better) Translates to: FLHFSIPFSLKT*RPPMDINSPLA Trigger: TGCCAAGGGGGAGTTGATATCCATGGGAGGCCTCCAGGTCTTTAAGGAGAAAGGGATGGAGAAATGGAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTCTCTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTTGCGACTATTCTCAATCCCGTTaGATAGCACTGTGGGACCAT | + |
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Preference number: 3 (lower is better) Translates to: QSLNYGAISPALMVFICDYSQSR*IALWDH Trigger: ATGGTCCCACAGTGCTATCAAACGGGATTGAGAATA...GTCGCAAATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAGAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| 3UTR GCA 72 bp | CATCTCATCTTCCCTATCATTATTAAAGTGTTTTTGTaGTTTCCGTCCCCACTGGTGAACCTGAGACCCTCC | + |
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Preference number: 3 (lower is better) Translates to: HLIFPIIIKVFL*FPSPLVNLRPS Trigger: GGAGGGTCTCAGGTTCACCAGTGGGGACGGAAAGCACAAAAACACTTTAATAATGATAGGGAAGATGAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| 3UTR-3UTR CAA 90 bp | CATCTCATCTTCCCTATCATTATTAAAGTGTTTTTGTGCTTTCCGTCCCCACTGGCAATCTCTCCAGCCTaGATGGTTTTCATTTGCGAC | + |
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Preference number: 3 (lower is better) Translates to: HLIFPIIIKVFLCFPSPLAISPA*MVFICD Trigger: GTCGCAAATGAAAACCATCAAGGCTGGAGAGATTGC...CAGTGGGGACGGAAAGCACAAAAACACTTTAATAATGATAGGGAAGATGAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| 3UTR-3UTR CAA 90 bp | CACAGAAGAGGACATAAGATGTCATTACAGATGTTTGTAAGACACCATGTGGTTGCAATCTCTCCAGCCTaGATGGTTTTCATTTGCGAC | + |
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Preference number: 3 (lower is better) Translates to: HRRGHKMSLQMFVRHHVVAISPA*MVFICD Trigger: GTCGCAAATGAAAACCATCAAGGCTGGAGAGATTGC...AACCACATGGTGTCTTACAAACATCTGTAATGACATCTTATGTCCTCTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| 3UTR-3UTR CAA 90 bp | AGGTATAGTGTAGCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTATATTCTCAATCCCGTTaGATAGCACTGTGGGACCAT | + |
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Preference number: 3 (lower is better) Translates to: RYSVAVFTHHRRGHKMSLYSQSR*IALWDH Trigger: ATGGTCCCACAGTGCTATCAAACGGGATTGAGAATA...TAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGCTACACTATACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| 3UTR-3UTR CAA 90 bp | GCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTACAGATGTTTGTATATTCTCAATCCCGTTaGATAGCACTGTGGGACCAT | + |
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Preference number: 3 (lower is better) Translates to: AVFTHHRRGHKMSLQMFVYSQSR*IALWDH Trigger: ATGGTCCCACAGTGCTATCAAACGGGATTGAGAATA...TACAAACATCTGTAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| CDS-3UTR GCA 90 bp | CCCTTTCTCCTTAAAGACCTGGAGGCCTCCCATGGATATCAACTCCCCCTTGGCCTGTTCTGTCTTTGTTaGTGGCAAAGCAACAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: PFLLKDLEASHGYQLPLGLFCLC*WQSNRK Trigger: CTTTCTGTTGCTTTGCCAGCAACAAAGACAGAACAG...GCCAAGGGGGAGTTGATATCCATGGGAGGCCTCCAGGTCTTTAAGGAGAAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| CDS-3UTR CCA 90 bp | CTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTTGCGACGTTAAAGACAGGAACAGGAGTTaGGCAGTGGAGGCTATAGTT | + |
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Preference number: 4 (lower is better) Translates to: LNYGAISPALMVFICDVKDRNRS*AVEAIV Trigger: AACTATAGCCTCCACTGCCCAACTCCTGTTCCTGTC...TTTAACGTCGCAAATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS-3UTR CCA 90 bp | CATCTCATCTTCCCTATCATTATTAAAGTGTTTTTGTGCTTTCCGTCCCCACTGGACAGGAACAGGAGTTaGGCAGTGGAGGCTATAGTT | + |
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Preference number: 4 (lower is better) Translates to: HLIFPIIIKVFLCFPSPLDRNRS*AVEAIV Trigger: AACTATAGCCTCCACTGCCCAACTCCTGTTCCTGTC...CAGTGGGGACGGAAAGCACAAAAACACTTTAATAATGATAGGGAAGATGAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| CDS-3UTR CCA 90 bp | TCTGCTTTCATTATTAAAGGTTACACCCATGTTGGGGGACTCATTTTTGTGGTCGACAGGAACAGGAGTTaGGCAGTGGAGGCTATAGTT | + |
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Preference number: 4 (lower is better) Translates to: SAFIIKGYTHVGGLIFVVDRNRS*AVEAIV Trigger: AACTATAGCCTCCACTGCCCAACTCCTGTTCCTGTC...GACCACAAAAATGAGTCCCCCAACATGGGTGTAACCTTTAATAATGAAAGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| CDS-3UTR GCA 90 bp | AGCAGTCAGTCTCTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTCTGTTCTGTCTTTGTTaGTGGCAAAGCAACAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SSQSLNYGAISPALMVFILFCLC*WQSNRK Trigger: CTTTCTGTTGCTTTGCCAGCAACAAAGACAGAACAG...AATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAGAGACTGACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| CDS-3UTR CCA 90 bp | AGGTATAGTGTAGCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTAGACAGGAACAGGAGTTaGGCAGTGGAGGCTATAGTT | + |
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Preference number: 4 (lower is better) Translates to: RYSVAVFTHHRRGHKMSLDRNRS*AVEAIV Trigger: AACTATAGCCTCCACTGCCCAACTCCTGTTCCTGTC...TAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGCTACACTATACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| CDS-3UTR GCA 90 bp | CTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTTGCGACGTTAAACTGTTCTGTCTTTGTTaGTGGCAAAGCAACAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: LNYGAISPALMVFICDVKLFCLC*WQSNRK Trigger: CTTTCTGTTGCTTTGCCAGCAACAAAGACAGAACAG...TTTAACGTCGCAAATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS-3UTR CCA 90 bp | CTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTTGCGACGTTAAATTCTGTCTTTGTTGCTaGCAAAGCAACAGAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LNYGAISPALMVFICDVKFCLCC*QSNRKS Trigger: GCTCTTTCTGTTGCTTTGCCAGCAACAAAGACAGAA...TTTAACGTCGCAAATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS-3UTR GCA 90 bp | GCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTACAGATGTTTGTACTGTTCTGTCTTTGTTaGTGGCAAAGCAACAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: AVFTHHRRGHKMSLQMFVLFCLC*WQSNRK Trigger: CTTTCTGTTGCTTTGCCAGCAACAAAGACAGAACAG...TACAAACATCTGTAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| CDS-3UTR CCA 90 bp | AGGTATAGTGTAGCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTATTCTGTCTTTGTTGCTaGCAAAGCAACAGAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RYSVAVFTHHRRGHKMSLFCLCC*QSNRKS Trigger: GCTCTTTCTGTTGCTTTGCCAGCAACAAAGACAGAA...TAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGCTACACTATACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| CDS-3UTR CCA 90 bp | TATTTAAAACTCATCTATGGTCTTGTAATCCTCCATGTGTGCACCTCTCTAAGGTTCTGTCTTTGTTGCTaGCAAAGCAACAGAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: YLKLIYGLVILHVCTSLRFCLCC*QSNRKS Trigger: GCTCTTTCTGTTGCTTTGCCAGCAACAAAGACAGAA...CCTTAGAGAGGTGCACACATGGAGGATTACAAGACCATAGATGAGTTTTAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| CDS-3UTR CCA 90 bp | GCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTACAGATGTTTGTATTTCCACTCCCTGGATaGGAATCATGTTGTTATACT | + |
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Preference number: 4 (lower is better) Translates to: AVFTHHRRGHKMSLQMFVFPLPG*ESCCYT Trigger: AGTATAACAACATGATTCCCATCCAGGGAGTGGAAA...TACAAACATCTGTAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| 3UTR CAA 72 bp | GCCATTCTGCTTTCATTATTAAAGGTTACACCCATGTaGGGGGACTCATTTTTGTGGTCTCATAAATTCAAA | + |
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Preference number: 4 (lower is better) Translates to: AILLSLLKVTPM*GDSFLWSHKFK Trigger: TTTGAATTTATGAGACCACAAAAATGAGTCCCCCAACATGGGTGTAACCTTTAATAATGAAAGCAGAATGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| CDS-3UTR CCA 90 bp | CTTAATATCATAAAAGTGGGGTTCCCTAACATTAGTTGTACTTTAGGCTTAAGGTTTCCACTCCCTGGATaGGAATCATGTTGTTATACT | + |
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Preference number: 4 (lower is better) Translates to: LNIIKVGFPNISCTLGLRFPLPG*ESCCYT Trigger: AGTATAACAACATGATTCCCATCCAGGGAGTGGAAA...CCTTAAGCCTAAAGTACAACTAATGTTAGGGAACCCCACTTTTATGATATTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| CDS TCA 90 bp | GCTTGCTACAGATCCATATCCGAGGTATATAGTGCCTGGAACTGCTaGTCCCATTGCCGCTCAGGTAGGCACATGTTTCCACTCCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: ACYRSISEVYSAWNC*SHCRSGRHMFPLPG Trigger: TCCAGGGAGTGGAAACATGTGCCTACCTGAGCGGCAATGGGATCAGCAGTTCCAGGCACTATATACCTCGGATATGGATCTGTAGCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS-3UTR CAA 90 bp | CAGTCTCTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTTGCGACAGACAGGAACAGGAGTaGGGCAGTGGAGGCTATAGT | + |
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Preference number: 5 (lower is better) Translates to: QSLNYGAISPALMVFICDRQEQE*GSGGYS Trigger: ACTATAGCCTCCACTGCCCAACTCCTGTTCCTGTCT...GTCGCAAATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAGAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS GCA 90 bp | TCAGTGTTGTCTGTCCACTTCCAAGGGTGCTCTGACGACTCTCTGTaGAGTCCAATCCAGGAATCAAAATTTGCCTTGTATCTCATTAGG | + |
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Preference number: 5 (lower is better) Translates to: SVLSVHFQGCSDDSL*SPIQESKFALYLIR Trigger: CCTAATGAGATACAAGGCAAATTTTGATTCCTGGATTGGACTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS-3UTR CAA 90 bp | CTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTTGCGACGTTAAAAGACAGGAACAGGAGTaGGGCAGTGGAGGCTATAGT | + |
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Preference number: 5 (lower is better) Translates to: LNYGAISPALMVFICDVKRQEQE*GSGGYS Trigger: ACTATAGCCTCCACTGCCCAACTCCTGTTCCTGTCT...TTTAACGTCGCAAATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS TCA 90 bp | CATGTTGTTATACTCAGTGTTGTCTGTCCACTTCCAAGGGTGCTCTaGCGACTCTCTGTGCAGTCCAATCCAGGAATCAAAATTTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: HVVILSVVCPLPRVL*RLSVQSNPGIKICL Trigger: AAGGCAAATTTTGATTCCTGGATTGGACTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGAGTATAACAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS-3UTR CAA 90 bp | AGCAGTCAGTCTCTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTGGATCTGTTCTGTCTTaGTTGCTGGCAAAGCAACAG | + |
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Preference number: 5 (lower is better) Translates to: SSQSLNYGAISPALMVFIGSVLS*LLAKQQ Trigger: CTGTTGCTTTGCCAGCAACAAAGACAGAACAGATCC...AATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAGAGACTGACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| CDS-3UTR CAA 90 bp | AGTCAGTCTCTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTTGCGGATCTGTTCTGTCTTaGTTGCTGGCAAAGCAACAG | + |
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Preference number: 5 (lower is better) Translates to: SQSLNYGAISPALMVFICGSVLS*LLAKQQ Trigger: CTGTTGCTTTGCCAGCAACAAAGACAGAACAGATCC...GCAAATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAGAGACTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS GCA 90 bp | GGAATCATGTTGTTATACTCAGTGTTGTCTGTCCACTTCCAAGGGTaGTCTGACGACTCTCTGTGCAGTCCAATCCAGGAATCAAAATTT | + |
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Preference number: 5 (lower is better) Translates to: GIMLLYSVLSVHFQG*SDDSLCSPIQESKF Trigger: AAATTTTGATTCCTGGATTGGACTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGAGTATAACAACATGATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS-3UTR CAA 90 bp | AGCAGTCAGTCTCTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTTTGTTATACTCAGTGTaGTCTGTCCACTTCCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: SSQSLNYGAISPALMVFILLYSV*SVHFQG Trigger: CCCTTGGAAGTGGACAGACAACACTGAGTATAACAA...AATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAGAGACTGACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| CDS-3UTR CAA 90 bp | AGGTATAGTGTAGCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTAAGACAGGAACAGGAGTaGGGCAGTGGAGGCTATAGT | + |
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Preference number: 5 (lower is better) Translates to: RYSVAVFTHHRRGHKMSLRQEQE*GSGGYS Trigger: ACTATAGCCTCCACTGCCCAACTCCTGTTCCTGTCT...TAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGCTACACTATACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| CDS-3UTR CAA 90 bp | CTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTTGCGACGTTAAATTGTTATACTCAGTGTaGTCTGTCCACTTCCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: LNYGAISPALMVFICDVKLLYSV*SVHFQG Trigger: CCCTTGGAAGTGGACAGACAACACTGAGTATAACAA...TTTAACGTCGCAAATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS-3UTR CAA 90 bp | GAAGCAGATCTCTGCAGATCCACAAAGATGAACTATCTTGTAGTGATTCTATATAGACAGGAACAGGAGTaGGGCAGTGGAGGCTATAGT | + |
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Preference number: 5 (lower is better) Translates to: EADLCRSTKMNYLVVILYRQEQE*GSGGYS Trigger: ACTATAGCCTCCACTGCCCAACTCCTGTTCCTGTCT...ATATAGAATCACTACAAGATAGTTCATCTTTGTGGATCTGCAGAGATCTGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| CDS-3UTR CAA 90 bp | TATTTAAAACTCATCTATGGTCTTGTAATCCTCCATGTGTGCACCTCTCTAAGGGGATCTGTTCTGTCTTaGTTGCTGGCAAAGCAACAG | + |
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Preference number: 5 (lower is better) Translates to: YLKLIYGLVILHVCTSLRGSVLS*LLAKQQ Trigger: CTGTTGCTTTGCCAGCAACAAAGACAGAACAGATCC...CCTTAGAGAGGTGCACACATGGAGGATTACAAGACCATAGATGAGTTTTAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| CDS-3UTR CAA 90 bp | TATAGTGTAGCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTACAGGGATCTGTTCTGTCTTaGTTGCTGGCAAAGCAACAG | + |
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Preference number: 5 (lower is better) Translates to: YSVAVFTHHRRGHKMSLQGSVLS*LLAKQQ Trigger: CTGTTGCTTTGCCAGCAACAAAGACAGAACAGATCC...CTGTAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGCTACACTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| CDS-3UTR CAA 90 bp | CAGTCTCTTAACTACGGAGCAATCTCTCCAGCCTTGATGGTTTTCATTTGCGACTCCAGGAATCAAAATTaGCCTTGTATCTCATTAGGA | + |
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Preference number: 5 (lower is better) Translates to: QSLNYGAISPALMVFICDSRNQN*PCISLG Trigger: TCCTAATGAGATACAAGGCAAATTTTGATTCCTGGA...GTCGCAAATGAAAACCATCAAGGCTGGAGAGATTGCTCCGTAGTTAAGAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS-3UTR CAA 90 bp | CATCTCATCTTCCCTATCATTATTAAAGTGTTTTTGTGCTTTCCGTCCCCACTGTTGTTATACTCAGTGTaGTCTGTCCACTTCCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: HLIFPIIIKVFLCFPSPLLLYSV*SVHFQG Trigger: CCCTTGGAAGTGGACAGACAACACTGAGTATAACAA...CAGTGGGGACGGAAAGCACAAAAACACTTTAATAATGATAGGGAAGATGAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 |
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| CDS-3UTR CAA 90 bp | AGGTATAGTGTAGCTGTTTTCACACACCACAGAAGAGGACATAAGATGTCATTATTGTTATACTCAGTGTaGTCTGTCCACTTCCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: RYSVAVFTHHRRGHKMSLLLYSV*SVHFQG Trigger: CCCTTGGAAGTGGACAGACAACACTGAGTATAACAA...TAATGACATCTTATGTCCTCTTCTGTGGTGTGTGAAAACAGCTACACTATACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000254.14 ENSMUST00000142388.8 ENSMUST00000203405.3 |
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| CDS GCA 72 bp | CGTTGTCAAACCGAGCTAGTTGGGCCTCTTGTGCCATaGAGAAGGTCTGGGCGAATGTCCAGTTACTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: RCQTELVGPLVP*RRSGRMSSYLC Trigger: ACACAAGTAACTGGACATTCGCCCAGACCTTCTGCATGGCACAAGAGGCCCAACTAGCTCGGTTTGACAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS CCA 72 bp | AAATTCAGCTCCTTCTCGTTGTCAAACCGAGCTAGTTaGGCCTCTTGTGCCATGCAGAAGGTCTGGGCGAAT | + |
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Preference number: 6 (lower is better) Translates to: KFSSFSLSNRAS*ASCAMQKVWAN Trigger: ATTCGCCCAGACCTTCTGCATGGCACAAGAGGCCCAACTAGCTCGGTTTGACAACGAGAAGGAGCTGAATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS CAA 90 bp | CATGTTTCCACTCCCTGGATGGGAATCATGTTGTTATACTCAGTGTaGTCTGTCCACTTCCAAGGGTGCTCTGACGACTCTCTGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: HVSTPWMGIMLLYSV*SVHFQGCSDDSLCS Trigger: ACTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGAGTATAACAACATGATTCCCATCCAGGGAGTGGAAACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS TCA 72 bp | ATACTCAGTGTTGTCTGTCCACTTCCAAGGGTGCTCTaGCGACTCTCTGTGCAGTCCAATCCAGGAATCAAA | + |
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Preference number: 6 (lower is better) Translates to: ILSVVCPLPRVL*RLSVQSNPGIK Trigger: TTTGATTCCTGGATTGGACTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS GCA 72 bp | TTGTTATACTCAGTGTTGTCTGTCCACTTCCAAGGGTaGTCTGACGACTCTCTGTGCAGTCCAATCCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LLYSVLSVHFQG*SDDSLCSPIQE Trigger: TTCCTGGATTGGACTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGAGTATAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS CAA 72 bp | GCCTTGTATCTCATTAGGAAATTCAGCTCCTTCTCGTaGTCAAACCGAGCTAGTTGGGCCTCTTGTGCCATG | + |
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Preference number: 6 (lower is better) Translates to: ALYLIRKFSSFS*SNRASWASCAM Trigger: CATGGCACAAGAGGCCCAACTAGCTCGGTTTGACAACGAGAAGGAGCTGAATTTCCTAATGAGATACAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS CAA 72 bp | ACTCCCTGGATGGGAATCATGTTGTTATACTCAGTGTaGTCTGTCCACTTCCAAGGGTGCTCTGACGACTCT | + |
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Preference number: 6 (lower is better) Translates to: TPWMGIMLLYSV*SVHFQGCSDDS Trigger: AGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGAGTATAACAACATGATTCCCATCCAGGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS GCA 72 bp | TCTGTCCACTTCCAAGGGTGCTCTGACGACTCTCTGTaGAGTCCAATCCAGGAATCAAAATTTGCCTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: SVHFQGCSDDSL*SPIQESKFALY Trigger: ATACAAGGCAAATTTTGATTCCTGGATTGGACTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS CAA 72 bp | AGAAGACTCAGGGGAGATGGCTCTGAGACTATTTCTTaGGAGAATTTTATAAGAATGTACACCTCCAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RRLRGDGSETIS*ENFIRMYTSSS Trigger: GGAACTGGAGGTGTACATTCTTATAAAATTCTCCAAAGAAATAGTCTCAGAGCCATCTCCCCTGAGTCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS CAA 72 bp | TCTCTGTGCAGTCCAATCCAGGAATCAAAATTTGCCTaGTATCTCATTAGGAAATTCAGCTCCTTCTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: SLCSPIQESKFA*YLIRKFSSFSL Trigger: CAACGAGAAGGAGCTGAATTTCCTAATGAGATACAAGGCAAATTTTGATTCCTGGATTGGACTGCACAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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| CDS CAA 72 bp | ACGACTCTCTGTGCAGTCCAATCCAGGAATCAAAATTaGCCTTGTATCTCATTAGGAAATTCAGCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TTLCAVQSRNQN*PCISLGNSAPS Trigger: AGAAGGAGCTGAATTTCCTAATGAGATACAAGGCAAATTTTGATTCCTGGATTGGACTGCACAGAGAGTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000254.14 ENSMUST00000075789.4 ENSMUST00000142388.8 ENSMUST00000203405.3 ENSMUST00000204259.3 |
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