RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLEC2E (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030155

Ensembl transcript IDs: ENSMUST00000032258.8

Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGTCTGTTTAATGGAGTCTAGGAGCCTGGTTATAAGCACACAATaGGAAACAAATAGGGAGGGTTCGGGAGGGTATAATAAAAGTACA +
Preference number: 1 (lower is better)
Translates to: KVCLMESRSLVISTQ*ETNREGSGGYNKST
Trigger: TGTACTTTTATTATACCCTCCCGAACCCTCCCTATTTGTTTCTCATTGTGTGCTTATAACCAGGCTCCTAGACTCCATTAAACAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR CAA 90 bp ACAAGTCTGTCAAAGCTTTTAGCATTATGTTGCCAAGTCCACAGGTaGTCTCAGGCTATCTCAGGAATATCGCCTTCTGGGGTTTACAGA +
Preference number: 2 (lower is better)
Translates to: TSLSKLLALCCQVHR*SQAISGISPSGVYR
Trigger: TCTGTAAACCCCAGAAGGCGATATTCCTGAGATAGCCTGAGACAACCTGTGGACTTGGCAACATAATGCTAAAAGCTTTGACAGACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR CAA 90 bp CAGATCTTCAGGGTGAGAGTTGCTGAGGTTCTGGTTTCCCACATTTaGGTCTCTCACACTAAGTTGTTAGCACAAGTCTGTCAAAGCTTT +
Preference number: 2 (lower is better)
Translates to: QIFRVRVAEVLVSHI*VSHTKLLAQVCQSF
Trigger: AAAGCTTTGACAGACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAACCAGAACCTCAGCAACTCTCACCCTGAAGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR-3UTR TCA 90 bp GAGGTTCTGGTTTCCCACATTTTGGTCTCTCACACTAAGTTGTTAGCACAAGTCGCAAGATTAGGCATCTaGAGGGGTTTCAGTAATCAG +
Preference number: 2 (lower is better)
Translates to: EVLVSHILVSHTKLLAQVARLGI*RGFSNQ
Trigger: CTGATTACTGAAACCCCTTCAGATGCCTAATCTTGC...GACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAACCAGAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR-3UTR CCA 90 bp CATCAAAGGGTCAGCCAGATCTTCAGGGTGAGAGTTGCTGAGGTTCTGGTTTCCTTATTTCGTCCTTTTTaGGACTCATCAGTACAGTAT +
Preference number: 2 (lower is better)
Translates to: HQRVSQIFRVRVAEVLVSLFRPF*DSSVQY
Trigger: ATACTGTACTGATGAGTCCCAAAAAGGACGAAATAA...GGAAACCAGAACCTCAGCAACTCTCACCCTGAAGATCTGGCTGACCCTTTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR-3UTR GCA 90 bp GCATTATGTTGCCAAGTCCACAGGTTGTCTCAGGCTATCTCAGGAATATCGCCTCAATGTGTAAATGATTaGAAGATTAGGCATCTGAAG +
Preference number: 2 (lower is better)
Translates to: ALCCQVHRLSQAISGISPQCVND*KIRHLK
Trigger: CTTCAGATGCCTAATCTTGCAATCATTTACACATTG...AGGCGATATTCCTGAGATAGCCTGAGACAACCTGTGGACTTGGCAACATAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR-3UTR CCA 90 bp GTTTCCCACATTTTGGTCTCTCACACTAAGTTGTTAGCACAAGTCTGTCAAAGCCAGAATAAACTTCCATaGGTTCAGTCACCCCACATT +
Preference number: 2 (lower is better)
Translates to: VSHILVSHTKLLAQVCQSQNKLP*VQSPHI
Trigger: AATGTGGGGTGACTGAACCCATGGAAGTTTATTCTG...GCTTTGACAGACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR-3UTR CCA 90 bp GTTTCCCACATTTTGGTCTCTCACACTAAGTTGTTAGCACAAGTCTGTCAAAGCAGGAATATCGCCTTCTaGGGTTTACAGAGTGACTTT +
Preference number: 2 (lower is better)
Translates to: VSHILVSHTKLLAQVCQSRNIAF*GLQSDF
Trigger: AAAGTCACTCTGTAAACCCCAGAAGGCGATATTCCT...GCTTTGACAGACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR-3UTR CCA 90 bp GAGGTTCTGGTTTCCCACATTTTGGTCTCTCACACTAAGTTGTTAGCACAAGTCACTGTCTATAATGTTTaGAGGCCACAAGCCAATTAT +
Preference number: 2 (lower is better)
Translates to: EVLVSHILVSHTKLLAQVTVYNV*RPQANY
Trigger: ATAATTGGCTTGTGGCCTCCAAACATTATAGACAGT...GACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAACCAGAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR TCA 72 bp ATAACTCCCATCAAAGGGTCAGCCAGATCTTCAGGGTaGGAGTTGCTGAGGTTCTGGTTTCCCACATTTTGG +
Preference number: 3 (lower is better)
Translates to: ITPIKGSARSSG*ELLRFWFPTFW
Trigger: CCAAAATGTGGGAAACCAGAACCTCAGCAACTCTCACCCTGAAGATCTGGCTGACCCTTTGATGGGAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR GCA 72 bp GTTAGCACAAGTCTGTCAAAGCTTTTAGCATTATGTTaGCAAGTCCACAGGTTGTCTCAGGCTATCTCAGGA +
Preference number: 3 (lower is better)
Translates to: VSTSLSKLLALC*QVHRLSQAISG
Trigger: TCCTGAGATAGCCTGAGACAACCTGTGGACTTGGCAACATAATGCTAAAAGCTTTGACAGACTTGTGCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR TCA 72 bp TGTTTGGAGGCCACAAGCCAATTATTATCTGTCCTGTaGTTACAGAATAAACTTCCATGGGTTCAGTCACCC +
Preference number: 3 (lower is better)
Translates to: CLEATSQLLSVL*LQNKLPWVQSP
Trigger: GGGTGACTGAACCCATGGAAGTTTATTCTGTAATCACAGGACAGATAATAATTGGCTTGTGGCCTCCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR TCA 72 bp TTAATGGAGTCTAGGAGCCTGGTTATAAGCACACAATaGGAAACAAATAGGGAGGGTTCGGGAGGGTATAAT +
Preference number: 3 (lower is better)
Translates to: LMESRSLVISTQ*ETNREGSGGYN
Trigger: ATTATACCCTCCCGAACCCTCCCTATTTGTTTCTCATTGTGTGCTTATAACCAGGCTCCTAGACTCCATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
CDS-3UTR CCA 90 bp CATCAAAGGGTCAGCCAGATCTTCAGGGTGAGAGTTGCTGAGGTTCTGGTTTCCTCTTCAGCATGCCCATaGAAGCCTCTTCAACCTTTG +
Preference number: 4 (lower is better)
Translates to: HQRVSQIFRVRVAEVLVSSSACP*KPLQPL
Trigger: CAAAGGTTGAAGAGGCTTCCATGGGCATGCTGAAGA...GGAAACCAGAACCTCAGCAACTCTCACCCTGAAGATCTGGCTGACCCTTTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
CDS-3UTR TCA 90 bp GTTTCCCACATTTTGGTCTCTCACACTAAGTTGTTAGCACAAGTCTGTCAAAGCGCTATGCAGGAGGACTaGCTGAATGTCCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VSHILVSHTKLLAQVCQSAMQED*LNVQFP
Trigger: GGGAAACTGGACATTCAGTCAGTCCTCCTGCATAGC...GCTTTGACAGACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR CAA 72 bp TCAAAGCTTTTAGCATTATGTTGCCAAGTCCACAGGTaGTCTCAGGCTATCTCAGGAATATCGCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SKLLALCCQVHR*SQAISGISPSG
Trigger: CCCAGAAGGCGATATTCCTGAGATAGCCTGAGACAACCTGTGGACTTGGCAACATAATGCTAAAAGCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
3UTR CAA 72 bp AGGGTGAGAGTTGCTGAGGTTCTGGTTTCCCACATTTaGGTCTCTCACACTAAGTTGTTAGCACAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: RVRVAEVLVSHI*VSHTKLLAQVC
Trigger: ACAGACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAACCAGAACCTCAGCAACTCTCACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
CDS-3UTR TCA 90 bp AATAAACTTCCATGGGTTCAGTCACCCCACATTTTTAGTGCCTCTGAATTCATATCCAATCCAGCCACTTaGGCATACAGCATAGCAAGG +
Preference number: 4 (lower is better)
Translates to: NKLPWVQSPHIFSASEFISNPAT*AYSIAR
Trigger: CCTTGCTATGCTGTATGCTCAAGTGGCTGGATTGGA...TATGAATTCAGAGGCACTAAAAATGTGGGGTGACTGAACCCATGGAAGTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
CDS-3UTR GCA 90 bp AGAGAAATTGTTTGTGAACTGTTATTTCGTCCTTTTTGGGACTCATCAGTACAGGGTCTGTCTTCAGCATaGCCATGGAAGCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: REIVCELLFRPFWDSSVQGLSSA*PWKPLQ
Trigger: TTGAAGAGGCTTCCATGGGCATGCTGAAGACAGACC...CTGTACTGATGAGTCCCAAAAAGGACGAAATAACAGTTCACAAACAATTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
CDS-3UTR CCA 90 bp GTTTCCCACATTTTGGTCTCTCACACTAAGTTGTTAGCACAAGTCTGTCAAAGCGTAAGGTGTAGTTGTTaGGCTTGTTACAAATCCATT +
Preference number: 4 (lower is better)
Translates to: VSHILVSHTKLLAQVCQSVRCSC*ACYKSI
Trigger: AATGGATTTGTAACAAGCCCAACAACTACACCTTAC...GCTTTGACAGACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
CDS TCA 90 bp AGATCCCCCTGTTACTCAAGTAGGCACATTCTCCTCCTCCTCGGGTaGGAACCAAGTTGTTATACTCAGTGTTGTCTGTCCATATCCAAG +
Preference number: 5 (lower is better)
Translates to: RSPCYSSRHILLLLG*EPSCYTQCCLSISK
Trigger: CTTGGATATGGACAGACAACACTGAGTATAACAACTTGGTTCTCACCCGAGGAGGAGGAGAATGTGCCTACTTGAGTAACAGGGGGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
CDS-3UTR CAA 90 bp GTTAACAGAGAAATTGTTTGTGAACTGTTATTTCGTCCTTTTTGGGACTCATCAATCCAATCCAGCCACTaGAGCATACAGCATAGCAAG +
Preference number: 5 (lower is better)
Translates to: VNREIVCELLFRPFWDSSIQSSH*SIQHSK
Trigger: CTTGCTATGCTGTATGCTCAAGTGGCTGGATTGGAT...TGATGAGTCCCAAAAAGGACGAAATAACAGTTCACAAACAATTTCTCTGTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
CDS-3UTR CAA 90 bp GTTAACAGAGAAATTGTTTGTGAACTGTTATTTCGTCCTTTTTGGGACTCATCACGGGTGAGAACCAAGTaGTTATACTCAGTGTTGTCT +
Preference number: 5 (lower is better)
Translates to: VNREIVCELLFRPFWDSSRVRTK*LYSVLS
Trigger: AGACAACACTGAGTATAACAACTTGGTTCTCACCCG...TGATGAGTCCCAAAAAGGACGAAATAACAGTTCACAAACAATTTCTCTGTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
CDS TCA 72 bp TACCCATTTCTCCCTCCTGCAGGCAGTCTGGGGCAGTaGGGTCTGTCTTCAGCATGCCCATGGAAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: YPFLPPAGSLGQ*GLSSACPWKPL
Trigger: AAGAGGCTTCCATGGGCATGCTGAAGACAGACCTCACTGCCCCAGACTGCCTGCAGGAGGGAGAAATGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
CDS TCA 72 bp AGAGCTAGATGGGCATCTAGTGCTATGCAGGAGGACTaGCTGAATGTCCAGTTTCCCATGTCTTCAGAAAAA +
Preference number: 6 (lower is better)
Translates to: RARWASSAMQED*LNVQFPMSSEK
Trigger: TTTTTCTGAAGACATGGGAAACTGGACATTCAGTCAGTCCTCCTGCATAGCACTAGATGCCCATCTAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
CDS TCA 72 bp ATAAAAGCATTTATTTCCAAATCCAATCCAGCCACTTaGGCATACAGCATAGCAAGGTTCACAGCTCTCCAT +
Preference number: 6 (lower is better)
Translates to: IKAFISKSNPAT*AYSIARFTALH
Trigger: ATGGAGAGCTGTGAACCTTGCTATGCTGTATGCTCAAGTGGCTGGATTGGATTTGGAAATAAATGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8
CDS CAA 72 bp AATAAAAGCATTTATTTCCAAATCCAATCCAGCCACTaGAGCATACAGCATAGCAAGGTTCACAGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: NKSIYFQIQSSH*SIQHSKVHSSP
Trigger: TGGAGAGCTGTGAACCTTGCTATGCTGTATGCTCAAGTGGCTGGATTGGATTTGGAAATAAATGCTTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032258.8