Pregenerated sensors for CLEC2E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030155Ensembl transcript IDs: ENSMUST00000032258.8
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AAGGTCTGTTTAATGGAGTCTAGGAGCCTGGTTATAAGCACACAATaGGAAACAAATAGGGAGGGTTCGGGAGGGTATAATAAAAGTACA | + |
Preference number: 1 (lower is better) Translates to: KVCLMESRSLVISTQ*ETNREGSGGYNKST Trigger: TGTACTTTTATTATACCCTCCCGAACCCTCCCTATTTGTTTCTCATTGTGTGCTTATAACCAGGCTCCTAGACTCCATTAAACAGACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR CAA 90 bp | ACAAGTCTGTCAAAGCTTTTAGCATTATGTTGCCAAGTCCACAGGTaGTCTCAGGCTATCTCAGGAATATCGCCTTCTGGGGTTTACAGA | + |
Preference number: 2 (lower is better) Translates to: TSLSKLLALCCQVHR*SQAISGISPSGVYR Trigger: TCTGTAAACCCCAGAAGGCGATATTCCTGAGATAGCCTGAGACAACCTGTGGACTTGGCAACATAATGCTAAAAGCTTTGACAGACTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR CAA 90 bp | CAGATCTTCAGGGTGAGAGTTGCTGAGGTTCTGGTTTCCCACATTTaGGTCTCTCACACTAAGTTGTTAGCACAAGTCTGTCAAAGCTTT | + |
Preference number: 2 (lower is better) Translates to: QIFRVRVAEVLVSHI*VSHTKLLAQVCQSF Trigger: AAAGCTTTGACAGACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAACCAGAACCTCAGCAACTCTCACCCTGAAGATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR-3UTR TCA 90 bp | GAGGTTCTGGTTTCCCACATTTTGGTCTCTCACACTAAGTTGTTAGCACAAGTCGCAAGATTAGGCATCTaGAGGGGTTTCAGTAATCAG | + |
Preference number: 2 (lower is better) Translates to: EVLVSHILVSHTKLLAQVARLGI*RGFSNQ Trigger: CTGATTACTGAAACCCCTTCAGATGCCTAATCTTGC...GACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAACCAGAACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR-3UTR CCA 90 bp | CATCAAAGGGTCAGCCAGATCTTCAGGGTGAGAGTTGCTGAGGTTCTGGTTTCCTTATTTCGTCCTTTTTaGGACTCATCAGTACAGTAT | + |
Preference number: 2 (lower is better) Translates to: HQRVSQIFRVRVAEVLVSLFRPF*DSSVQY Trigger: ATACTGTACTGATGAGTCCCAAAAAGGACGAAATAA...GGAAACCAGAACCTCAGCAACTCTCACCCTGAAGATCTGGCTGACCCTTTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR-3UTR GCA 90 bp | GCATTATGTTGCCAAGTCCACAGGTTGTCTCAGGCTATCTCAGGAATATCGCCTCAATGTGTAAATGATTaGAAGATTAGGCATCTGAAG | + |
Preference number: 2 (lower is better) Translates to: ALCCQVHRLSQAISGISPQCVND*KIRHLK Trigger: CTTCAGATGCCTAATCTTGCAATCATTTACACATTG...AGGCGATATTCCTGAGATAGCCTGAGACAACCTGTGGACTTGGCAACATAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR-3UTR CCA 90 bp | GTTTCCCACATTTTGGTCTCTCACACTAAGTTGTTAGCACAAGTCTGTCAAAGCCAGAATAAACTTCCATaGGTTCAGTCACCCCACATT | + |
Preference number: 2 (lower is better) Translates to: VSHILVSHTKLLAQVCQSQNKLP*VQSPHI Trigger: AATGTGGGGTGACTGAACCCATGGAAGTTTATTCTG...GCTTTGACAGACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR-3UTR CCA 90 bp | GTTTCCCACATTTTGGTCTCTCACACTAAGTTGTTAGCACAAGTCTGTCAAAGCAGGAATATCGCCTTCTaGGGTTTACAGAGTGACTTT | + |
Preference number: 2 (lower is better) Translates to: VSHILVSHTKLLAQVCQSRNIAF*GLQSDF Trigger: AAAGTCACTCTGTAAACCCCAGAAGGCGATATTCCT...GCTTTGACAGACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR-3UTR CCA 90 bp | GAGGTTCTGGTTTCCCACATTTTGGTCTCTCACACTAAGTTGTTAGCACAAGTCACTGTCTATAATGTTTaGAGGCCACAAGCCAATTAT | + |
Preference number: 2 (lower is better) Translates to: EVLVSHILVSHTKLLAQVTVYNV*RPQANY Trigger: ATAATTGGCTTGTGGCCTCCAAACATTATAGACAGT...GACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAACCAGAACCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR TCA 72 bp | ATAACTCCCATCAAAGGGTCAGCCAGATCTTCAGGGTaGGAGTTGCTGAGGTTCTGGTTTCCCACATTTTGG | + |
Preference number: 3 (lower is better) Translates to: ITPIKGSARSSG*ELLRFWFPTFW Trigger: CCAAAATGTGGGAAACCAGAACCTCAGCAACTCTCACCCTGAAGATCTGGCTGACCCTTTGATGGGAGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR GCA 72 bp | GTTAGCACAAGTCTGTCAAAGCTTTTAGCATTATGTTaGCAAGTCCACAGGTTGTCTCAGGCTATCTCAGGA | + |
Preference number: 3 (lower is better) Translates to: VSTSLSKLLALC*QVHRLSQAISG Trigger: TCCTGAGATAGCCTGAGACAACCTGTGGACTTGGCAACATAATGCTAAAAGCTTTGACAGACTTGTGCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR TCA 72 bp | TGTTTGGAGGCCACAAGCCAATTATTATCTGTCCTGTaGTTACAGAATAAACTTCCATGGGTTCAGTCACCC | + |
Preference number: 3 (lower is better) Translates to: CLEATSQLLSVL*LQNKLPWVQSP Trigger: GGGTGACTGAACCCATGGAAGTTTATTCTGTAATCACAGGACAGATAATAATTGGCTTGTGGCCTCCAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR TCA 72 bp | TTAATGGAGTCTAGGAGCCTGGTTATAAGCACACAATaGGAAACAAATAGGGAGGGTTCGGGAGGGTATAAT | + |
Preference number: 3 (lower is better) Translates to: LMESRSLVISTQ*ETNREGSGGYN Trigger: ATTATACCCTCCCGAACCCTCCCTATTTGTTTCTCATTGTGTGCTTATAACCAGGCTCCTAGACTCCATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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CDS-3UTR CCA 90 bp | CATCAAAGGGTCAGCCAGATCTTCAGGGTGAGAGTTGCTGAGGTTCTGGTTTCCTCTTCAGCATGCCCATaGAAGCCTCTTCAACCTTTG | + |
Preference number: 4 (lower is better) Translates to: HQRVSQIFRVRVAEVLVSSSACP*KPLQPL Trigger: CAAAGGTTGAAGAGGCTTCCATGGGCATGCTGAAGA...GGAAACCAGAACCTCAGCAACTCTCACCCTGAAGATCTGGCTGACCCTTTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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CDS-3UTR TCA 90 bp | GTTTCCCACATTTTGGTCTCTCACACTAAGTTGTTAGCACAAGTCTGTCAAAGCGCTATGCAGGAGGACTaGCTGAATGTCCAGTTTCCC | + |
Preference number: 4 (lower is better) Translates to: VSHILVSHTKLLAQVCQSAMQED*LNVQFP Trigger: GGGAAACTGGACATTCAGTCAGTCCTCCTGCATAGC...GCTTTGACAGACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR CAA 72 bp | TCAAAGCTTTTAGCATTATGTTGCCAAGTCCACAGGTaGTCTCAGGCTATCTCAGGAATATCGCCTTCTGGG | + |
Preference number: 4 (lower is better) Translates to: SKLLALCCQVHR*SQAISGISPSG Trigger: CCCAGAAGGCGATATTCCTGAGATAGCCTGAGACAACCTGTGGACTTGGCAACATAATGCTAAAAGCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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3UTR CAA 72 bp | AGGGTGAGAGTTGCTGAGGTTCTGGTTTCCCACATTTaGGTCTCTCACACTAAGTTGTTAGCACAAGTCTGT | + |
Preference number: 4 (lower is better) Translates to: RVRVAEVLVSHI*VSHTKLLAQVC Trigger: ACAGACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAACCAGAACCTCAGCAACTCTCACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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CDS-3UTR TCA 90 bp | AATAAACTTCCATGGGTTCAGTCACCCCACATTTTTAGTGCCTCTGAATTCATATCCAATCCAGCCACTTaGGCATACAGCATAGCAAGG | + |
Preference number: 4 (lower is better) Translates to: NKLPWVQSPHIFSASEFISNPAT*AYSIAR Trigger: CCTTGCTATGCTGTATGCTCAAGTGGCTGGATTGGA...TATGAATTCAGAGGCACTAAAAATGTGGGGTGACTGAACCCATGGAAGTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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CDS-3UTR GCA 90 bp | AGAGAAATTGTTTGTGAACTGTTATTTCGTCCTTTTTGGGACTCATCAGTACAGGGTCTGTCTTCAGCATaGCCATGGAAGCCTCTTCAA | + |
Preference number: 4 (lower is better) Translates to: REIVCELLFRPFWDSSVQGLSSA*PWKPLQ Trigger: TTGAAGAGGCTTCCATGGGCATGCTGAAGACAGACC...CTGTACTGATGAGTCCCAAAAAGGACGAAATAACAGTTCACAAACAATTTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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CDS-3UTR CCA 90 bp | GTTTCCCACATTTTGGTCTCTCACACTAAGTTGTTAGCACAAGTCTGTCAAAGCGTAAGGTGTAGTTGTTaGGCTTGTTACAAATCCATT | + |
Preference number: 4 (lower is better) Translates to: VSHILVSHTKLLAQVCQSVRCSC*ACYKSI Trigger: AATGGATTTGTAACAAGCCCAACAACTACACCTTAC...GCTTTGACAGACTTGTGCTAACAACTTAGTGTGAGAGACCAAAATGTGGGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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CDS TCA 90 bp | AGATCCCCCTGTTACTCAAGTAGGCACATTCTCCTCCTCCTCGGGTaGGAACCAAGTTGTTATACTCAGTGTTGTCTGTCCATATCCAAG | + |
Preference number: 5 (lower is better) Translates to: RSPCYSSRHILLLLG*EPSCYTQCCLSISK Trigger: CTTGGATATGGACAGACAACACTGAGTATAACAACTTGGTTCTCACCCGAGGAGGAGGAGAATGTGCCTACTTGAGTAACAGGGGGATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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CDS-3UTR CAA 90 bp | GTTAACAGAGAAATTGTTTGTGAACTGTTATTTCGTCCTTTTTGGGACTCATCAATCCAATCCAGCCACTaGAGCATACAGCATAGCAAG | + |
Preference number: 5 (lower is better) Translates to: VNREIVCELLFRPFWDSSIQSSH*SIQHSK Trigger: CTTGCTATGCTGTATGCTCAAGTGGCTGGATTGGAT...TGATGAGTCCCAAAAAGGACGAAATAACAGTTCACAAACAATTTCTCTGTTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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CDS-3UTR CAA 90 bp | GTTAACAGAGAAATTGTTTGTGAACTGTTATTTCGTCCTTTTTGGGACTCATCACGGGTGAGAACCAAGTaGTTATACTCAGTGTTGTCT | + |
Preference number: 5 (lower is better) Translates to: VNREIVCELLFRPFWDSSRVRTK*LYSVLS Trigger: AGACAACACTGAGTATAACAACTTGGTTCTCACCCG...TGATGAGTCCCAAAAAGGACGAAATAACAGTTCACAAACAATTTCTCTGTTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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CDS TCA 72 bp | TACCCATTTCTCCCTCCTGCAGGCAGTCTGGGGCAGTaGGGTCTGTCTTCAGCATGCCCATGGAAGCCTCTT | + |
Preference number: 6 (lower is better) Translates to: YPFLPPAGSLGQ*GLSSACPWKPL Trigger: AAGAGGCTTCCATGGGCATGCTGAAGACAGACCTCACTGCCCCAGACTGCCTGCAGGAGGGAGAAATGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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CDS TCA 72 bp | AGAGCTAGATGGGCATCTAGTGCTATGCAGGAGGACTaGCTGAATGTCCAGTTTCCCATGTCTTCAGAAAAA | + |
Preference number: 6 (lower is better) Translates to: RARWASSAMQED*LNVQFPMSSEK Trigger: TTTTTCTGAAGACATGGGAAACTGGACATTCAGTCAGTCCTCCTGCATAGCACTAGATGCCCATCTAGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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CDS TCA 72 bp | ATAAAAGCATTTATTTCCAAATCCAATCCAGCCACTTaGGCATACAGCATAGCAAGGTTCACAGCTCTCCAT | + |
Preference number: 6 (lower is better) Translates to: IKAFISKSNPAT*AYSIARFTALH Trigger: ATGGAGAGCTGTGAACCTTGCTATGCTGTATGCTCAAGTGGCTGGATTGGATTTGGAAATAAATGCTTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |
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CDS CAA 72 bp | AATAAAAGCATTTATTTCCAAATCCAATCCAGCCACTaGAGCATACAGCATAGCAAGGTTCACAGCTCTCCA | + |
Preference number: 6 (lower is better) Translates to: NKSIYFQIQSSH*SIQHSKVHSSP Trigger: TGGAGAGCTGTGAACCTTGCTATGCTGTATGCTCAAGTGGCTGGATTGGATTTGGAAATAAATGCTTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032258.8 |