RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLEC2D (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030157

Ensembl transcript IDs: ENSMUST00000032260.6

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CAA 90 bp CAAGAGAGGCTTTTTAGCCTGTTATTTCGTCCTTTTTGGGACTCATCAGTGTGGTATTCTCTATCTGGTTaGATAGCACTTTGGGACCAT +
Preference number: 3 (lower is better)
Translates to: QERLFSLLFRPFWDSSVWYSLSG*IALWDH
Trigger: ATGGTCCCAAAGTGCTATCAAACCAGATAGAGAATA...CCACACTGATGAGTCCCAAAAAGGACGAAATAACAGGCTAAAAAGCCTCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
3UTR-3UTR CAA 90 bp CAAGAGAGGCTTTTTAGCCTGTTATTTCGTCCTTTTTGGGACTCATCAGTGTGGCCCTCATGCTTTAAATaGCAGAGTATAAAGTACAGT +
Preference number: 3 (lower is better)
Translates to: QERLFSLLFRPFWDSSVWPSCFK*QSIKYS
Trigger: ACTGTACTTTATACTCTGCAATTTAAAGCATGAGGG...CCACACTGATGAGTCCCAAAAAGGACGAAATAACAGGCTAAAAAGCCTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS-3UTR TCA 90 bp CAAGAGAGGCTTTTTAGCCTGTTATTTCGTCCTTTTTGGGACTCATCAGTGTGGGGAGGCTATAGCTGTTaGGCTTGCTACAGATCCACA +
Preference number: 4 (lower is better)
Translates to: QERLFSLLFRPFWDSSVWGGYSC*ACYRST
Trigger: TGTGGATCTGTAGCAAGCTCAACAGCTATAGCCTCC...CCACACTGATGAGTCCCAAAAAGGACGAAATAACAGGCTAAAAAGCCTCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS-3UTR GCA 90 bp CCCTCATGCTTTAAATTGCAGAGTATAAAGTACAGTGTAGCTGTTTTCATACACCCCACTTCTACCTCCTaGGGGCTGCCTGTGGGACTA +
Preference number: 4 (lower is better)
Translates to: PSCFKLQSIKYSVAVFIHPTSTS*GLPVGL
Trigger: TAGTCCCACAGGCAGCCCGCAGGAGGTAGAAGTGGG...GTGTATGAAAACAGCTACACTGTACTTTATACTCTGCAATTTAAAGCATGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS-3UTR GCA 90 bp CAAGAGAGGCTTTTTAGCCTGTTATTTCGTCCTTTTTGGGACTCATCAGTGTGGGGGGAGATGGTTCCGTaGCTTTTTCCTTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: QERLFSLLFRPFWDSSVWGEMVP*LFPWRI
Trigger: AATTCTCCAAGGAAAAAGGCACGGAACCATCTCCCC...CCACACTGATGAGTCCCAAAAAGGACGAAATAACAGGCTAAAAAGCCTCTCTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS-3UTR CCA 90 bp AAATATTCTCTATCTGGTTTGATAGCACTTTGGGACCATAGGGGAAAGAGTAGCAAATTCAGCTCATCCTaGTTGTCAAACCGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: KYSLSGLIALWDHRGKSSKFSSS*LSNRAS
Trigger: ACTAGCTCGGTTTGACAACCAGGATGAGCTGAATTT...GCTACTCTTTCCCCTATGGTCCCAAAGTGCTATCAAACCAGATAGAGAATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS-3UTR TCA 90 bp TCTGATGTTAAGAAATATTCTCTATCTGGTTTGATAGCACTTTGGGACCATAGGTTCTGTCTTTGTTGCTaGCAAAGCAACAGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SDVKKYSLSGLIALWDHRFCLCC*QSNRKS
Trigger: GCTCTTTCTGTTGCTTTGTCAGCAACAAAGACAGAA...CCTATGGTCCCAAAGTGCTATCAAACCAGATAGAGAATATTTCTTAACATCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS-3UTR CCA 90 bp TCTGATGTTAAGAAATATTCTCTATCTGGTTTGATAGCACTTTGGGACCATAGGCCGTGCCTTTTTCCTTaGAGAATTTTACCCACTTCT +
Preference number: 4 (lower is better)
Translates to: SDVKKYSLSGLIALWDHRPCLFP*RILPTS
Trigger: AGAAGTGGGTAAAATTCTCCAAGGAAAAAGGCACGG...CCTATGGTCCCAAAGTGCTATCAAACCAGATAGAGAATATTTCTTAACATCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
3UTR CAA 72 bp TTCATTTCTGATGTTAAGAAATATTCTCTATCTGGTTaGATAGCACTTTGGGACCATAGGGGAAAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: FISDVKKYSLSG*IALWDHRGKSS
Trigger: GCTACTCTTTCCCCTATGGTCCCAAAGTGCTATCAAACCAGATAGAGAATATTTCTTAACATCAGAAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS TCA 90 bp CGTGTTGTTATACTCAGTGTTGTCTGTCCACTTCCAAGGGTGCTCTaGCGACTCTCTGTGCAGGCCAATCCAGGAATCAAAATTCGCCTT +
Preference number: 5 (lower is better)
Translates to: RVVILSVVCPLPRVL*RLSVQANPGIKIRL
Trigger: AAGGCGAATTTTGATTCCTGGATTGGCCTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGAGTATAACAACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS GCA 90 bp TCAGTGTTGTCTGTCCACTTCCAAGGGTGCTCTGACGACTCTCTGTaGAGGCCAATCCAGGAATCAAAATTCGCCTTGTATCTCATTAGG +
Preference number: 5 (lower is better)
Translates to: SVLSVHFQGCSDDSL*RPIQESKFALYLIR
Trigger: CCTAATGAGATACAAGGCGAATTTTGATTCCTGGATTGGCCTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS GCA 90 bp GGAATCGTGTTGTTATACTCAGTGTTGTCTGTCCACTTCCAAGGGTaGTCTGACGACTCTCTGTGCAGGCCAATCCAGGAATCAAAATTC +
Preference number: 5 (lower is better)
Translates to: GIVLLYSVLSVHFQG*SDDSLCRPIQESKF
Trigger: GAATTTTGATTCCTGGATTGGCCTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGAGTATAACAACACGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS-3UTR CAA 90 bp TCTCTATCTGGTTTGATAGCACTTTGGGACCATAGGGGAAAGAGTAGCACCCACGGATCTGTTCTGTCTTaGTTGCTGACAAAGCAACAG +
Preference number: 5 (lower is better)
Translates to: SLSGLIALWDHRGKSSTHGSVLS*LLTKQQ
Trigger: CTGTTGCTTTGTCAGCAACAAAGACAGAACAGATCC...GTGGGTGCTACTCTTTCCCCTATGGTCCCAAAGTGCTATCAAACCAGATAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS TCA 90 bp AGCAGCATAGGTCTTGTTGACTGGGATCTGTTCTGTCTTTGTTGCTaGCAAAGCAACAGAAAGAGCAATTACAGCTACAGTGAGGACCAT +
Preference number: 5 (lower is better)
Translates to: SSIGLVDWDLFCLCC*QSNRKSNYSYSEDH
Trigger: ATGGTCCTCACTGTAGCTGTAATTGCTCTTTCTGTTGCTTTGTCAGCAACAAAGACAGAACAGATCCCAGTCAACAAGACCTATGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS-3UTR CAA 90 bp CAAGAGAGGCTTTTTAGCCTGTTATTTCGTCCTTTTTGGGACTCATCAGTGTGGTCCGTGCCTTTTTCCTaGGAGAATTTTACCCACTTC +
Preference number: 5 (lower is better)
Translates to: QERLFSLLFRPFWDSSVWSVPFS*ENFTHF
Trigger: GAAGTGGGTAAAATTCTCCAAGGAAAAAGGCACGGA...CCACACTGATGAGTCCCAAAAAGGACGAAATAACAGGCTAAAAAGCCTCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS CCA 72 bp AAATTCAGCTCATCCTGGTTGTCAAACCGAGCTAGTTaGGCCTCTTGTGCCATGCAGAAGGCCTGGGCGAAT +
Preference number: 6 (lower is better)
Translates to: KFSSSWLSNRAS*ASCAMQKAWAN
Trigger: ATTCGCCCAGGCCTTCTGCATGGCACAAGAGGCCCAACTAGCTCGGTTTGACAACCAGGATGAGCTGAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS CAA 90 bp AATCTTTCCTCTCCCCGGATGGGAATCGTGTTGTTATACTCAGTGTaGTCTGTCCACTTCCAAGGGTGCTCTGACGACTCTCTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: NLSSPRMGIVLLYSV*SVHFQGCSDDSLCR
Trigger: CCTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGAGTATAACAACACGATTCCCATCCGGGGAGAGGAAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS CAA 72 bp TCTCCCCGGATGGGAATCGTGTTGTTATACTCAGTGTaGTCTGTCCACTTCCAAGGGTGCTCTGACGACTCT +
Preference number: 6 (lower is better)
Translates to: SPRMGIVLLYSV*SVHFQGCSDDS
Trigger: AGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGAGTATAACAACACGATTCCCATCCGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS TCA 72 bp ATACTCAGTGTTGTCTGTCCACTTCCAAGGGTGCTCTaGCGACTCTCTGTGCAGGCCAATCCAGGAATCAAA +
Preference number: 6 (lower is better)
Translates to: ILSVVCPLPRVL*RLSVQANPGIK
Trigger: TTTGATTCCTGGATTGGCCTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS GCA 72 bp TCTGTCCACTTCCAAGGGTGCTCTGACGACTCTCTGTaGAGGCCAATCCAGGAATCAAAATTCGCCTTGTAT +
Preference number: 6 (lower is better)
Translates to: SVHFQGCSDDSL*RPIQESKFALY
Trigger: ATACAAGGCGAATTTTGATTCCTGGATTGGCCTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS GCA 72 bp TTGTTATACTCAGTGTTGTCTGTCCACTTCCAAGGGTaGTCTGACGACTCTCTGTGCAGGCCAATCCAGGAA +
Preference number: 6 (lower is better)
Translates to: LLYSVLSVHFQG*SDDSLCRPIQE
Trigger: TTCCTGGATTGGCCTGCACAGAGAGTCGTCAGAGCACCCTTGGAAGTGGACAGACAACACTGAGTATAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS CAA 72 bp GCCTTGTATCTCATTAGGAAATTCAGCTCATCCTGGTaGTCAAACCGAGCTAGTTGGGCCTCTTGTGCCATG +
Preference number: 6 (lower is better)
Translates to: ALYLIRKFSSSW*SNRASWASCAM
Trigger: CATGGCACAAGAGGCCCAACTAGCTCGGTTTGACAACCAGGATGAGCTGAATTTCCTAATGAGATACAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS TCA 72 bp CAATCCAGTTTTGCGGGCAAGCAGCATAGGTCTTGTTaGCTGGGATCTGTTCTGTCTTTGTTGCTGACAAAG +
Preference number: 6 (lower is better)
Translates to: QSSFAGKQHRSC*LGSVLSLLLTK
Trigger: CTTTGTCAGCAACAAAGACAGAACAGATCCCAGTCAACAAGACCTATGCTGCTTGCCCGCAAAACTGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS CCA 72 bp TGTTGTTCAGGTAGGCAAATCTTTCCTCTCCCCGGATaGGAATCGTGTTGTTATACTCAGTGTTGTCTGTCC +
Preference number: 6 (lower is better)
Translates to: CCSGRQIFPLPG*ESCCYTQCCLS
Trigger: GGACAGACAACACTGAGTATAACAACACGATTCCCATCCGGGGAGAGGAAAGATTTGCCTACCTGAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS TCA 72 bp AGATCCACATCCGAAGTGAATAGATCCTGGTACTGCTaGTCCCGTTGTTGTTCAGGTAGGCAAATCTTTCCT +
Preference number: 6 (lower is better)
Translates to: RSTSEVNRSWYC*SRCCSGRQIFP
Trigger: AGGAAAGATTTGCCTACCTGAACAACAACGGGATCAGCAGTACCAGGATCTATTCACTTCGGATGTGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS TCA 72 bp ATAGCTGTTGAGCTTGCTACAGATCCACATCCGAAGTaGATAGATCCTGGTACTGCTGATCCCGTTGTTGTT +
Preference number: 6 (lower is better)
Translates to: IAVELATDPHPK*IDPGTADPVVV
Trigger: AACAACAACGGGATCAGCAGTACCAGGATCTATTCACTTCGGATGTGGATCTGTAGCAAGCTCAACAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS CAA 72 bp TCTCTGTGCAGGCCAATCCAGGAATCAAAATTCGCCTaGTATCTCATTAGGAAATTCAGCTCATCCTGGTTG +
Preference number: 6 (lower is better)
Translates to: SLCRPIQESKFA*YLIRKFSSSWL
Trigger: CAACCAGGATGAGCTGAATTTCCTAATGAGATACAAGGCGAATTTTGATTCCTGGATTGGCCTGCACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6
CDS TCA 72 bp GGTCTTGTTGACTGGGATCTGTTCTGTCTTTGTTGCTaGCAAAGCAACAGAAAGAGCAATTACAGCTACAGT +
Preference number: 6 (lower is better)
Translates to: GLVDWDLFCLCC*QSNRKSNYSYS
Trigger: ACTGTAGCTGTAATTGCTCTTTCTGTTGCTTTGTCAGCAACAAAGACAGAACAGATCCCAGTCAACAAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032260.6