Pregenerated sensors for CLEC1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030159Ensembl transcript IDs: ENSMUST00000032262.14, ENSMUST00000112079.3, ENSMUST00000112081.9
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCCTGTCCATCCTTAGAGGCAGGTTCCGCTaGGCTGAGAGCTTGTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: VQIFYCMIKHLSDILSILRGRFR*AESLFP Trigger: CGGAAACAAGCTCTCAGCTCAGCGGAACCTGCCTCT...AAGGATGGACAGGATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR TCA 90 bp | TGCCAGCATTTCTCTCACATATTAAGTAATGTCTCTCTTTACAGGAAGCTGGATTTGCTGTGTGACCGCTaGGCTGAGAGCTTGTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: CQHFSHILSNVSLYRKLDLLCDR*AESLFP Trigger: CGGAAACAAGCTCTCAGCTCAGCGGTCACACAGCAA...ATCCAGCTTCCTGTAAAGAGAGACATTACTTAATATGTGAGAGAAATGCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112079.3 |
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| CDS-3UTR TCA 90 bp | GTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCCTGTCCATCCTTTTGTTGCAGAGTCGCTaGGAGATTTTCCTTCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: VQIFYCMIKHLSDILSILLLQSR*EIFLLR Trigger: GCGGAGAAGGAAAATCTCTCAGCGACTCTGCAACAA...AAGGATGGACAGGATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR CCA 90 bp | ATGAATGCGGAGTTCTTTTGTCCAGATCTTTTATTGCATGATCAAGCACTTATCCCAGGGTGCTCTGGCTaGCAGTCTTCACAAGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: MNAEFFCPDLLLHDQALIPGCSG*QSSQVL Trigger: CAACACTTGTGAAGACTGCCAGCCAGAGCACCCTGG...GATAAGTGCTTGATCATGCAATAAAAGATCTGGACAAAAGAACTCCGCATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR TCA 90 bp | TTTTCTTCTGTATTCCCAGAAAGATTAATCCCGTTCTTGCGAAGAACTGAGCTATTGTTGCAGAGTCGCTaGGAGATTTTCCTTCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: FSSVFPERLIPFLRRTELLLQSR*EIFLLR Trigger: GCGGAGAAGGAAAATCTCTCAGCGACTCTGCAACAA...TAGCTCAGTTCTTCGCAAGAACGGGATTAATCTTTCTGGGAATACAGAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112079.3 |
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| CDS-3UTR TCA 90 bp | CGGAGTTCTTTTGTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCGTTCTTGCGAAGAACTaGGCTATCCTCCCACATCCA | + |
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Preference number: 4 (lower is better) Translates to: RSSFVQIFYCMIKHLSDIVLAKN*AILPHP Trigger: TGGATGTGGGAGGATAGCTCAGTTCTTCGCAAGAAC...GATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGACAAAAGAACTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR GCA 90 bp | TGCCAGCATTTCTCTCACATATTAAGTAATGTCTCTCTTTACAGGAAGCTGGATGCCAGTAGATACTTTTaGTGTGTGACCGCTGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: CQHFSHILSNVSLYRKLDASRYF*CVTAEL Trigger: CAGCTCAGCGGTCACACAGCAAAAGTATCTACTGGC...ATCCAGCTTCCTGTAAAGAGAGACATTACTTAATATGTGAGAGAAATGCTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112079.3 |
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| 3UTR CAA 72 bp | TTTTCTTCTGTATTCCCAGAAAGATTAATCCCGTTCTaGCGAAGAACTGAGCTATCCTCCCACATCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: FSSVFPERLIPF*RRTELSSHIQS Trigger: AGACTGGATGTGGGAGGATAGCTCAGTTCTTCGCAAGAACGGGATTAATCTTTCTGGGAATACAGAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112079.3 |
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| CDS-3UTR GCA 90 bp | CAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCCTGTCCATCCTTCTGGGTCCACTCTTGTCATaGCAGCATTTCTCTCACATA | + |
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Preference number: 4 (lower is better) Translates to: QIFYCMIKHLSDILSILLGPLLS*QHFSHI Trigger: TATGTGAGAGAAATGCTGGCATGACAAGAGTGGACC...CAGAAGGATGGACAGGATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR GCA 90 bp | ATGCGGAGTTCTTTTGTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACGCCAGTAGATACTTTTaGTGTGTGACCGACATGATC | + |
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Preference number: 4 (lower is better) Translates to: MRSSFVQIFYCMIKHLSDASRYF*CVTDMI Trigger: GATCATGTCGGTCACACAGCAAAAGTATCTACTGGC...GTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGACAAAAGAACTCCGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR GCA 90 bp | GTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCCTGTCCATCCTTTTCTTGGCCAATTGTTaGAGAGTCGCTGAGAGATTT | + |
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Preference number: 4 (lower is better) Translates to: VQIFYCMIKHLSDILSILFLANC*RVAERF Trigger: AAATCTCTCAGCGACTCTGCAACAATTGGCCAAGAA...AAGGATGGACAGGATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR GCA 90 bp | TCTTTTGTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCCTGTCCCAGTGCAATACTGCTTaGTCTCTTCCCATGTTAGGT | + |
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Preference number: 4 (lower is better) Translates to: SFVQIFYCMIKHLSDILSQCNTA*SLPMLG Trigger: ACCTAACATGGGAAGAGAGCAAGCAGTATTGCACTG...GGACAGGATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGACAAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR GCA 90 bp | CGGAGTTCTTTTGTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCTGCTCAGTGCAATACTaGTTGCTCTCTTCCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: RSSFVQIFYCMIKHLSDICSVQY*LLSSHV Trigger: AACATGGGAAGAGAGCAAGCAGTATTGCACTGAGCA...GATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGACAAAAGAACTCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR GCA 90 bp | GTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCCTGTCCATCCTTTTGCATTCTGCTCAGTaGAATACTGCTTGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VQIFYCMIKHLSDILSILLHSAQ*NTACSL Trigger: AAGAGAGCAAGCAGTATTGCACTGAGCAGAATGCAA...AAGGATGGACAGGATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR CCA 90 bp | ATGAATGCGGAGTTCTTTTGTCCAGATCTTTTATTGCATGATCAAGCACTTATCCAACAACCAGCCCCATaGATGAGATCAGCAGAACTA | + |
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Preference number: 4 (lower is better) Translates to: MNAEFFCPDLLLHDQALIQQPAP*MRSAEL Trigger: TAGTTCTGCTGATCTCATCCATGGGGCTGGTTGTTG...GATAAGTGCTTGATCATGCAATAAAAGATCTGGACAAAAGAACTCCGCATTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR GCA 90 bp | CAGCATTTCTCTCACATATTAAGTAATGTCTCTCTTTACAGGAAGCTGGATGGATTCTTGGCCAATTGTTaGAGAGTCGCTGAGAGATTT | + |
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Preference number: 4 (lower is better) Translates to: QHFSHILSNVSLYRKLDGFLANC*RVAERF Trigger: AAATCTCTCAGCGACTCTGCAACAATTGGCCAAGAA...TCCATCCAGCTTCCTGTAAAGAGAGACATTACTTAATATGTGAGAGAAATGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112079.3 |
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| CDS-3UTR CCA 90 bp | AGTTCTTTTGTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCCTGCTTGGCAGAATTTCTTaGCCAATTGTTGCAGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: SSFVQIFYCMIKHLSDILLGRIS*PIVAES Trigger: CGACTCTGCAACAATTGGCCAAGAAATTCTGCCAAG...CAGGATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGACAAAAGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR CCA 90 bp | TTGTCATGCCAGCATTTCTCTCACATATTAAGTAATGTCTCTCTTTACAGGAAGCTTGGCAGAATTTCTTaGCCAATTGTTGCAGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: LSCQHFSHILSNVSLYRKLGRIS*PIVAES Trigger: CGACTCTGCAACAATTGGCCAAGAAATTCTGCCAAG...CTTCCTGTAAAGAGAGACATTACTTAATATGTGAGAGAAATGCTGGCATGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112079.3 |
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| CDS-3UTR GCA 90 bp | TTTATGAATGCGGAGTTCTTTTGTCCAGATCTTTTATTGCATGATCAAGCACTTACAAGTGTTGCATTCTaGTCAGTGCAATACTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: FMNAEFFCPDLLLHDQALTSVAF*SVQYCL Trigger: CAAGCAGTATTGCACTGAGCAGAATGCAACACTTGT...AAGTGCTTGATCATGCAATAAAAGATCTGGACAAAAGAACTCCGCATTCATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR GCA 90 bp | ATGAATGCGGAGTTCTTTTGTCCAGATCTTTTATTGCATGATCAAGCACTTATCAGTCTTCACAAGTGTTaGATTCTGCTCAGTGCAATA | + |
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Preference number: 4 (lower is better) Translates to: MNAEFFCPDLLLHDQALISLHKC*ILLSAI Trigger: TATTGCACTGAGCAGAATGCAACACTTGTGAAGACT...GATAAGTGCTTGATCATGCAATAAAAGATCTGGACAAAAGAACTCCGCATTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR CCA 90 bp | ATGCGGAGTTCTTTTGTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACCTCTTTACAGGAAGCTaGATGGATTTTTCCATTATG | + |
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Preference number: 4 (lower is better) Translates to: MRSSFVQIFYCMIKHLSDLFTGS*MDFSIM Trigger: CATAATGGAAAAATCCATCCAGCTTCCTGTAAAGAG...GTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGACAAAAGAACTCCGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS TCA 90 bp | GCTCAGTGCAATACTGCTTGCTCTCTTCCCATGTTAGGTTACGCCTaGAGAACCCGTAGCAACTATCTCCATGGTATCTCCACTTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: AQCNTACSLPMLGYA*RTRSNYLHGISTSW Trigger: CCACGAAGTGGAGATACCATGGAGATAGTTGCTACGGGTTCTTCAGGCGTAACCTAACATGGGAAGAGAGCAAGCAGTATTGCACTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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| CDS CCA 90 bp | CGAAGAACTGAGCTATCCTCCCACATCCAGTCTTTCTTAGAGTTCTaGCGTGATAATCCAATCCAACGGACTGAAGTAATCCTTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: RRTELSSHIQSFLEF*RDNPIQRTEVILSA Trigger: TGCAGAAAGGATTACTTCAGTCCGTTGGATTGGATTATCACGCCAGAACTCTAAGAAAGACTGGATGTGGGAGGATAGCTCAGTTCTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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| CDS-3UTR CAA 90 bp | GTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCCTGTCCATCCTTGCAGTTGGTCCACTCTaGTCATGCCAGCATTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: VQIFYCMIKHLSDILSILAVGPL*SCQHFS Trigger: AGAGAAATGCTGGCATGACAAGAGTGGACCAACTGC...AAGGATGGACAGGATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS TCA 90 bp | GCAGGGGCTGCACTTGTGCTCAAAAGTGCTCTTTGTCTTAATTTCTaGTTGTCTAATCAACTCTTGGCAGAATTTCTTGGCCAATTGTTG | + |
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Preference number: 5 (lower is better) Translates to: AGAALVLKSALCLNF*LSNQLLAEFLGQLL Trigger: CAACAATTGGCCAAGAAATTCTGCCAAGAGTTGATTAGACAATCAGAAATTAAGACAAAGAGCACTTTTGAGCACAAGTGCAGCCCCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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| CDS GCA 90 bp | TCTGATTGTCTAATCAACTCTTGGCAGAATTTCTTGGCCAATTGTTaGAGAGTCGCTGAGAGATTTTCCTTCTCCGCCAGTAGATACTTT | + |
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Preference number: 5 (lower is better) Translates to: SDCLINSWQNFLANC*RVAERFSFSASRYF Trigger: AAAGTATCTACTGGCGGAGAAGGAAAATCTCTCAGCGACTCTGCAACAATTGGCCAAGAAATTCTGCCAAGAGTTGATTAGACAATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032262.14 ENSMUST00000112079.3 ENSMUST00000112081.9 |
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| CDS-3UTR CAA 90 bp | TTTGTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCCTGTCCATCTCTTGGCAGAATTTCTaGGCCAATTGTTGCAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: FVQIFYCMIKHLSDILSISWQNF*ANCCRV Trigger: GACTCTGCAACAATTGGCCAAGAAATTCTGCCAAGA...GATGGACAGGATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR CAA 90 bp | AAAGCAGTTGGTCCACTCTTGTCATGCCAGCATTTCTCTCACATATTAAGTAATTCTTGGCAGAATTTCTaGGCCAATTGTTGCAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: KAVGPLLSCQHFSHILSNSWQNF*ANCCRV Trigger: GACTCTGCAACAATTGGCCAAGAAATTCTGCCAAGA...ATTACTTAATATGTGAGAGAAATGCTGGCATGACAAGAGTGGACCAACTGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112079.3 |
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| CDS-3UTR CAA 90 bp | TTTGTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCCTGTCCATCCAGTCTTCACAAGTGTaGCATTCTGCTCAGTGCAAT | + |
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Preference number: 5 (lower is better) Translates to: FVQIFYCMIKHLSDILSIQSSQV*HSAQCN Trigger: ATTGCACTGAGCAGAATGCAACACTTGTGAAGACTG...GATGGACAGGATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR CAA 90 bp | TTTATGAATGCGGAGTTCTTTTGTCCAGATCTTTTATTGCATGATCAAGCACTTTCAGTGCAATACTGCTaGCTCTCTTCCCATGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: FMNAEFFCPDLLLHDQALSVQYC*LSSHVR Trigger: CCTAACATGGGAAGAGAGCAAGCAGTATTGCACTGA...AAGTGCTTGATCATGCAATAAAAGATCTGGACAAAAGAACTCCGCATTCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS-3UTR CAA 90 bp | TTTTCTTCTGTATTCCCAGAAAGATTAATCCCGTTCTTGCGAAGAACTGAGCTATTGTCTAATCAACTCTaGGCAGAATTTCTTGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: FSSVFPERLIPFLRRTELLSNQL*AEFLGQ Trigger: TTGGCCAAGAAATTCTGCCAAGAGTTGATTAGACAA...TAGCTCAGTTCTTCGCAAGAACGGGATTAATCTTTCTGGGAATACAGAAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112079.3 |
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| CDS-3UTR CAA 90 bp | AGTTCTTTTGTCCAGATCTTTTATTGCATGATCAAGCACTTATCTGACATCCTGTTGTCTAATCAACTCTaGGCAGAATTTCTTGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: SSFVQIFYCMIKHLSDILLSNQL*AEFLGQ Trigger: TTGGCCAAGAAATTCTGCCAAGAGTTGATTAGACAA...CAGGATGTCAGATAAGTGCTTGATCATGCAATAAAAGATCTGGACAAAAGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS CCA 72 bp | ACCCGTAGCAACTATCTCCATGGTATCTCCACTTCGTaGCGCAGGGGCTGCACTTGTGCTCAAAAGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: TRSNYLHGISTS*RRGCTCAQKCS Trigger: AGAGCACTTTTGAGCACAAGTGCAGCCCCTGCGCCACGAAGTGGAGATACCATGGAGATAGTTGCTACGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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| CDS GCA 72 bp | GTCCAGGGTGCTCTGGCTGGCAGTCTTCACAAGTGTTaGATTCTGCTCAGTGCAATACTGCTTGCTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VQGALAGSLHKC*ILLSAILLALF Trigger: GAAGAGAGCAAGCAGTATTGCACTGAGCAGAATGCAACACTTGTGAAGACTGCCAGCCAGAGCACCCTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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| CDS CAA 90 bp | CTGCAATGTAGTCCAGGGTGCTCTGGCTGGCAGTCTTCACAAGTGTaGCATTCTGCTCAGTGCAATACTGCTTGCTCTCTTCCCATGTTA | + |
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Preference number: 6 (lower is better) Translates to: LQCSPGCSGWQSSQV*HSAQCNTACSLPML Trigger: TAACATGGGAAGAGAGCAAGCAGTATTGCACTGAGCAGAATGCAACACTTGTGAAGACTGCCAGCCAGAGCACCCTGGACTACATTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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| CDS GCA 72 bp | GTGCTCTGGCTGGCAGTCTTCACAAGTGTTGCATTCTaGTCAGTGCAATACTGCTTGCTCTCTTCCCATGTT | + |
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Preference number: 6 (lower is better) Translates to: VLWLAVFTSVAF*SVQYCLLSSHV Trigger: AACATGGGAAGAGAGCAAGCAGTATTGCACTGAGCAGAATGCAACACTTGTGAAGACTGCCAGCCAGAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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| CDS CAA 72 bp | GCAGGTTCCGCTGAGCTGAGAGCTTGTTTCCGGGGCTaGATGTTTAAAGTGATATACCCATCTTCATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: AGSAELRACFRG*MFKVIYPSSSC Trigger: GCAGGATGAAGATGGGTATATCACTTTAAACATCAAGCCCCGGAAACAAGCTCTCAGCTCAGCGGAACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032262.14 |
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| CDS GCA 72 bp | GGCTGGCAGTCTTCACAAGTGTTGCATTCTGCTCAGTaGAATACTGCTTGCTCTCTTCCCATGTTAGGTTAC | + |
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Preference number: 6 (lower is better) Translates to: GWQSSQVLHSAQ*NTACSLPMLGY Trigger: GTAACCTAACATGGGAAGAGAGCAAGCAGTATTGCACTGAGCAGAATGCAACACTTGTGAAGACTGCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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| CDS CAA 72 bp | CCATGGTATCTCCACTTCGTGGCGCAGGGGCTGCACTaGTGCTCAAAAGTGCTCTTTGTCTTAATTTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: PWYLHFVAQGLH*CSKVLFVLISD Trigger: ATCAGAAATTAAGACAAAGAGCACTTTTGAGCACAAGTGCAGCCCCTGCGCCACGAAGTGGAGATACCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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| CDS CAA 72 bp | TGTGTGACCGCTGAGCTGAGAGCTTGTTTCCGGGGCTaGATGTTTAAAGTGATATACCCATCTTCATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: CVTAELRACFRG*MFKVIYPSSSC Trigger: GCAGGATGAAGATGGGTATATCACTTTAAACATCAAGCCCCGGAAACAAGCTCTCAGCTCAGCGGTCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112079.3 ENSMUST00000112081.9 |
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| CDS TCA 72 bp | AATACTGCTTGCTCTCTTCCCATGTTAGGTTACGCCTaGAGAACCCGTAGCAACTATCTCCATGGTATCTCC | + |
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Preference number: 6 (lower is better) Translates to: NTACSLPMLGYA*RTRSNYLHGIS Trigger: GGAGATACCATGGAGATAGTTGCTACGGGTTCTTCAGGCGTAACCTAACATGGGAAGAGAGCAAGCAGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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| CDS CCA 72 bp | GAGCTATCCTCCCACATCCAGTCTTTCTTAGAGTTCTaGCGTGATAATCCAATCCAACGGACTGAAGTAATC | + |
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Preference number: 6 (lower is better) Translates to: ELSSHIQSFLEF*RDNPIQRTEVI Trigger: GATTACTTCAGTCCGTTGGATTGGATTATCACGCCAGAACTCTAAGAAAGACTGGATGTGGGAGGATAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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| CDS CAA 72 bp | TTCACAAGTGTTGCATTCTGCTCAGTGCAATACTGCTaGCTCTCTTCCCATGTTAGGTTACGCCTGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: FTSVAFCSVQYC*LSSHVRLRLKN Trigger: GTTCTTCAGGCGTAACCTAACATGGGAAGAGAGCAAGCAGTATTGCACTGAGCAGAATGCAACACTTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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| CDS TCA 72 bp | ATTCCCAGAAAGATTAATCCCGTTCTTGCGAAGAACTaGGCTATCCTCCCACATCCAGTCTTTCTTAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: IPRKINPVLAKN*AILPHPVFLRV Trigger: AACTCTAAGAAAGACTGGATGTGGGAGGATAGCTCAGTTCTTCGCAAGAACGGGATTAATCTTTCTGGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032262.14 ENSMUST00000112081.9 |
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