Pregenerated sensors for CLEC1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033082Ensembl transcript IDs: ENSMUST00000037481.10, ENSMUST00000203162.3, ENSMUST00000204012.2, ENSMUST00000204952.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCCTCACTTGGCAGTCCTTTTGCTGGTGGTTGAAGCTGACCTGTTaGCCCCTCAATCCAATGCTTCATGTCACCTACTGGAGCTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: GLTWQSFCWWLKLTC*PLNPMLHVTYWSSP Trigger: TGGAGAGCTCCAGTAGGTGACATGAAGCATTGGATTGAGGGGTCAACAGGTCAGCTTCAACCACCAGCAAAAGGACTGCCAAGTGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR GCA 90 bp | ACCATGCTGCACTTACCCAGGTGGAGCAGTAGGGAGAGTTCTCACTaGAAACTGCCAGTGATCCAGGATATCTGTCCAGTAATTAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: TMLHLPRWSSRESSH*KLPVIQDICPVISH Trigger: GTGGCTAATTACTGGACAGATATCCTGGATCACTGGCAGTTTGCAGTGAGAACTCTCCCTACTGCTCCACCTGGGTAAGTGCAGCATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR TCA 90 bp | GTACCCGAGGGAGCTCATTCTATGGGAAAGGCCATGTTCTCTGTGTaGCTTTTCCTGCAGTTTATTCACAATTACCTACACAGCAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: VPEGAHSMGKAMFSV*LFLQFIHNYLHSRD Trigger: GTCTCTGCTGTGTAGGTAATTGTGAATAAACTGCAGGAAAAGTCACACAGAGAACATGGCCTTTCCCATAGAATGAGCTCCCTCGGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR GCA 90 bp | CTGAGGCTGGCCTTGAACTTCTCATGTCTTCCTTCTCCTTCCAAGTaGTGTGACTCTAAAGGACCAATAGTTATGTGGACACTAGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: LRLALNFSCLPSPSK*CDSKGPIVMWTLAH Trigger: ATGAGCTAGTGTCCACATAACTATTGGTCCTTTAGAGTCACAGCACTTGGAAGGAGAAGGAAGACATGAGAAGTTCAAGGCCAGCCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR CCA 90 bp | CCACCAACCCCTAATGCTGATTTATCTCTAACCAATGAAACCACTTaGCATGGTACTATTCACAAAGACCCTGTTGTGGCTTGGAATGTC | + |
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Preference number: 1 (lower is better) Translates to: PPTPNADLSLTNETT*HGTIHKDPVVAWNV Trigger: GACATTCCAAGCCACAACAGGGTCTTTGTGAATAGTACCATGCCAAGTGGTTTCATTGGTTAGAGATAAATCAGCATTAGGGGTTGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR TCA 90 bp | AAGAGTAAGGGAGACATGAGACAGAGGCTGATAACGTCTAGACCCTaGGAAGGGAGAAAACTGAAAGTCTTTTGTAAATCAAGGAGGACA | + |
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Preference number: 1 (lower is better) Translates to: KSKGDMRQRLITSRP*EGRKLKVFCKSRRT Trigger: TGTCCTCCTTGATTTACAAAAGACTTTCAGTTTTCTCCCTTCTCAGGGTCTAGACGTTATCAGCCTCTGTCTCATGTCTCCCTTACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR TCA 90 bp | TTTATAGTGGTCTCACCACCTGTCAATGCACAAGGAGTTAAGGAGTaGTGGTTTCCATTTTGTGAAAAGGATTCCTTTGCTGGTCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: FIVVSPPVNAQGVKE*WFPFCEKDSFAGLL Trigger: TAGGAGACCAGCAAAGGAATCCTTTTCACAAAATGGAAACCATCACTCCTTAACTCCTTGTGCATTGACAGGTGGTGAGACCACTATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR GCA 90 bp | GAGCTCATTCTATGGGAAAGGCCATGTTCTCTGTGTGACTTTTCCTaGAGTTTATTCACAATTACCTACACAGCAGAGACTATAAAAACG | + |
|
Preference number: 1 (lower is better) Translates to: ELILWERPCSLCDFS*SLFTITYTAETIKT Trigger: CGTTTTTATAGTCTCTGCTGTGTAGGTAATTGTGAATAAACTGCAGGAAAAGTCACACAGAGAACATGGCCTTTCCCATAGAATGAGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR CCA 90 bp | TTGTCTTACTTTTATTTATTTACACTGATGAGGTGGTTTAAAAGGTaGAAGCAACACACACACACACACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: LSYFYLFTLMRWFKR*KQHTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCTTCCACCTTTTAAACCACCTCATCAGTGTAAATAAATAAAAGTAAGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR TCA 90 bp | CACTTCTATCTGCTTGTCCCAGTAAACCTGCATAGAATTCAATATTaGAGAACTCCCCAAACGAACATGAAGGAAATCTCAAAGAAAACT | + |
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Preference number: 1 (lower is better) Translates to: HFYLLVPVNLHRIQY*RTPQTNMKEISKKT Trigger: AGTTTTCTTTGAGATTTCCTTCATGTTCGTTTGGGGAGTTCTTCAATATTGAATTCTATGCAGGTTTACTGGGACAAGCAGATAGAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR CCA 90 bp | ATGATCATGTCTTTGTCTTACTTTTATTTATTTACACTGATGAGGTaGTTTAAAAGGTGGAAGCAACACACACACACACACACACACACA | + |
|
Preference number: 1 (lower is better) Translates to: MIMSLSYFYLFTLMR*FKRWKQHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTTGCTTCCACCTTTTAAACCACCTCATCAGTGTAAATAAATAAAAGTAAGACAAAGACATGATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTGTGCAGATGTCACAGCTTCTCCATTTCCTCCCACGCCTGTTTAGAAACCACATTGGCCTCACTTaGCAGTCCTTTTGCTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LAVQMSQLLHFLPRLFRNHIGLT*QSFCWW Trigger: CCACCAGCAAAAGGACTGCCAAGTGAGGCCAATGTG...GTTTCTAAACAGGCGTGGGAGGAAATGGAGAAGCTGTGACATCTGCACAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGAATGTCACCACCGAGAGAAGCTCATGTCTAGTCAAGAGTCTGGCTGTGCACACATTGGCCTCACTTaGCAGTCCTTTTGCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LECHHREKLMSSQESGCAHIGLT*QSFCWW Trigger: CCACCAGCAAAAGGACTGCCAAGTGAGGCCAATGTG...TGCACAGCCAGACTCTTGACTAGACATGAGCTTCTCTCGGTGGTGACATTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR TCA 90 bp | CTCAATATCCTCAGGAAAAGAAATAGCTCATTGTGTACCCGAGGGAGCTCATTCCTAGAGAGACACATGTaGCCCTCCTGGAGCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LNILRKRNSSLCTRGSSFLERHM*PSWSPE Trigger: TTCTGGGCTCCAGGAGGGTCACATGTGTCTCTCTAG...GAATGAGCTCCCTCGGGTACACAATGAGCTATTTCTTTTCCTGAGGATATTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAATCCAGCTCTTCCTGTGTGCTTATCTTCAGCATGGTGGCATTGTCAGCATGAGTTTTCTGTTCTaGGCCTGGAGAGACTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: GKIQLFLCAYLQHGGIVSMSFLF*AWRDCS Trigger: GCTACAGTCTCTCCAGGCCCAGAACAGAAAACTCAT...GCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCTGGATTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| 3UTR CAA 90 bp | GCAAAATCCAGCTCTTCCTGTGTGCTTATCTTCAGCATGGTGGCATaGTCAGCCAGGCAGAAGTATTCACAACTCTGCCAGTTCTTACTT | + |
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Preference number: 2 (lower is better) Translates to: AKSSSSCVLIFSMVA*SARQKYSQLCQFLL Trigger: AAGTAAGAACTGGCAGAGTTGTGAATACTTCTGCCTGGCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCTGGATTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGAATGTCACCACCGAGAGAAGCTCATGTCTAGTCAAGAGTCTGGCTGTGCAATAACGTCTAGACCCTaGGAAGGGAGAAAACTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LECHHREKLMSSQESGCAITSRP*EGRKLK Trigger: TTTCAGTTTTCTCCCTTCTCAGGGTCTAGACGTTAT...TGCACAGCCAGACTCTTGACTAGACATGAGCTTCTCTCGGTGGTGACATTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR TCA 90 bp | GGTTGGGGTCTTCTGCTAGTTTTTCTTGGATTGCCTGTTAGGATAAAGGACACCGAGCCTAGGAAAGTGTaGGCTGGACGCAAAAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: GWGLLLVFLGLPVRIKDTEPRKV*AGRKKN Trigger: ATTCTTTTTGCGTCCAGCTCACACTTTCCTAGGCTC...GGTGTCCTTTATCCTAACAGGCAATCCAAGAAAAACTAGCAGAAGACCCCAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR GCA 90 bp | CTATTGCTGGTGCCACCAACCCCTAATGCTGATTTATCTCTAACCAATGAAACCACTTGGCAGTCCTTTTaGTGGTGGTTGAAGCTGACC | + |
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Preference number: 2 (lower is better) Translates to: LLLVPPTPNADLSLTNETTWQSF*WWLKLT Trigger: GGTCAGCTTCAACCACCAGCAAAAGGACTGCCAAGT...GGTTTCATTGGTTAGAGATAAATCAGCATTAGGGGTTGGTGGCACCAGCAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAATATCCTCAGGAAAAGAAATAGCTCATTGTGTACCCGAGGGAGCTCATTCACTTGGCAGTCCTTTTaGTGGTGGTTGAAGCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: LNILRKRNSSLCTRGSSFTWQSF*WWLKLT Trigger: GGTCAGCTTCAACCACCAGCAAAAGGACTGCCAAGT...GAATGAGCTCCCTCGGGTACACAATGAGCTATTTCTTTTCCTGAGGATATTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR-3UTR CCA 90 bp | CTATTGCTGGTGCCACCAACCCCTAATGCTGATTTATCTCTAACCAATGAAACCCTTCATGTCACCTACTaGAGCTCTCCAGGTACCACT | + |
|
Preference number: 2 (lower is better) Translates to: LLLVPPTPNADLSLTNETLHVTY*SSPGTT Trigger: AGTGGTACCTGGAGAGCTCCAGTAGGTGACATGAAG...GGTTTCATTGGTTAGAGATAAATCAGCATTAGGGGTTGGTGGCACCAGCAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR-3UTR TCA 90 bp | GGTTGGGGTCTTCTGCTAGTTTTTCTTGGATTGCCTGTTAGGATAAAGGACACCTGTTTCCCAAAGCTTTaGATGTCCTTCACATTGGCC | + |
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Preference number: 2 (lower is better) Translates to: GWGLLLVFLGLPVRIKDTCFPKL*MSFTLA Trigger: GGCCAATGTGAAGGACATTCAAAGCTTTGGGAAACA...GGTGTCCTTTATCCTAACAGGCAATCCAAGAAAAACTAGCAGAAGACCCCAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR TCA 90 bp | CTAGGATGGCCTGCAAATATGTACCTGAGGCTGGCCTTGAACTTCTCATGTCTTATAACGTCTAGACCCTaGGAAGGGAGAAAACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LGWPANMYLRLALNFSCLITSRP*EGRKLK Trigger: TTTCAGTTTTCTCCCTTCTCAGGGTCTAGACGTTAT...AAGACATGAGAAGTTCAAGGCCAGCCTCAGGTACATATTTGCAGGCCATCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR CCA 90 bp | CAACATACCAACCTCAACGTCATGATTTCGCCTCAGACATTTCACTTTAGGAATAGAGCAGCACAGGGTTaGGGTCTTCTGCTAGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: QHTNLNVMISPQTFHFRNRAAQG*GLLLVF Trigger: AAAAACTAGCAGAAGACCCCAACCCTGTGCTGCTCT...ATTCCTAAAGTGAAATGTCTGAGGCGAAATCATGACGTTGAGGTTGGTATGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAATATCCTCAGGAAAAGAAATAGCTCATTGTGTACCCGAGGGAGCTCATTCCAATATTATGAGGTTTaGATACAGAAAGGGGGATCA | + |
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Preference number: 2 (lower is better) Translates to: LNILRKRNSSLCTRGSSFQYYEV*IQKGGS Trigger: TGATCCCCCTTTCTGTATCCAAACCTCATAATATTG...GAATGAGCTCCCTCGGGTACACAATGAGCTATTTCTTTTCCTGAGGATATTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR CAA 90 bp | AAGGAGTTAAGGAGTGATGGTTTCCATTTTGTGAAAAGGATTCCTTaGCTGGTCTCCTACACCAAATCACAAATCCATTCTAGAACGTCA | + |
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Preference number: 2 (lower is better) Translates to: KELRSDGFHFVKRIP*LVSYTKSQIHSRTS Trigger: TGACGTTCTAGAATGGATTTGTGATTTGGTGTAGGAGACCAGCAAAGGAATCCTTTTCACAAAATGGAAACCATCACTCCTTAACTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR TCA 90 bp | GATGGAAGAAGAAATCAACCTATTATCTGTACAGAGGTTGTTCTGGATTTTGTTTGTTTCCCAAAGCTTTaGATGTCCTTCACATTGGCC | + |
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Preference number: 2 (lower is better) Translates to: DGRRNQPIICTEVVLDFVCFPKL*MSFTLA Trigger: GGCCAATGTGAAGGACATTCAAAGCTTTGGGAAACA...AACAAAATCCAGAACAACCTCTGTACAGATAATAGGTTGATTTCTTCTTCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR CCA 90 bp | GACTTTTCCTGCAGTTTATTCACAATTACCTACACAGCAGAGACTATAAAAACGAGCTCATCTAGTTTGTaGCTTTGTATCAACTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: DFSCSLFTITYTAETIKTSSSSL*LCINSS Trigger: AGAAGAGTTGATACAAAGCCACAAACTAGATGAGCT...CGTTTTTATAGTCTCTGCTGTGTAGGTAATTGTGAATAAACTGCAGGAAAAGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR GCA 72 bp | TGTCACCTACTGGAGCTCTCCAGGTACCACTCTCCCTaGTATCCTCTCACAGGCACACCTCCTCAGCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: CHLLELSRYHSP*YPLTGTPPQLF Trigger: AAAGAGCTGAGGAGGTGTGCCTGTGAGAGGATAGCAGGGAGAGTGGTACCTGGAGAGCTCCAGTAGGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR CCA 72 bp | ACACGATCGCAGGCAACCATGCTGCACTTACCCAGGTaGAGCAGTAGGGAGAGTTCTCACTGCAAACTGCCA | + |
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Preference number: 3 (lower is better) Translates to: TRSQATMLHLPR*SSRESSHCKLP Trigger: TGGCAGTTTGCAGTGAGAACTCTCCCTACTGCTCCACCTGGGTAAGTGCAGCATGGTTGCCTGCGATCGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR GCA 72 bp | CACGCAAAAGCTGCCCATTACCCTTCACAAACTTCCTaGTGTCACCCGACTCCTGACCTGTTTCCTGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: HAKAAHYPSQTS*CHPTPDLFPAD Trigger: ATCAGCAGGAAACAGGTCAGGAGTCGGGTGACAGCAGGAAGTTTGTGAAGGGTAATGGGCAGCTTTTGCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGCTGTGCAGATGTCACAGCTTCTCCATTTCCTCCCACGCCTGTTTAGAAACTCACATTGGCCTCACTaGGCAGTCCTTTTGCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: LAVQMSQLLHFLPRLFRNSHWPH*AVLLLV Trigger: CACCAGCAAAAGGACTGCCAAGTGAGGCCAATGTGA...GTTTCTAAACAGGCGTGGGAGGAAATGGAGAAGCTGTGACATCTGCACAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR CAA 90 bp | GGCACAGTAGGTGAAGTCACTTTTGCGAGCCTAGGAAAGTGTGAGCTGGACGCAAGGGGAAAGACACAATaGATGGAGTGGTGGTTGACA | + |
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Preference number: 3 (lower is better) Translates to: GTVGEVTFASLGKCELDARGKTQ*MEWWLT Trigger: TGTCAACCACCACTCCATCAATTGTGTCTTTCCCCT...TGCGTCCAGCTCACACTTTCCTAGGCTCGCAAAAGTGACTTCACCTACTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR TCA 72 bp | TGGCAGTCCTTTTGCTGGTGGTTGAAGCTGACCTGTTaGCCCCTCAATCCAATGCTTCATGTCACCTACTGG | + |
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Preference number: 3 (lower is better) Translates to: WQSFCWWLKLTC*PLNPMLHVTYW Trigger: CCAGTAGGTGACATGAAGCATTGGATTGAGGGGTCAACAGGTCAGCTTCAACCACCAGCAAAAGGACTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR GCA 72 bp | CACTTACCCAGGTGGAGCAGTAGGGAGAGTTCTCACTaGAAACTGCCAGTGATCCAGGATATCTGTCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: HLPRWSSRESSH*KLPVIQDICPV Trigger: TACTGGACAGATATCCTGGATCACTGGCAGTTTGCAGTGAGAACTCTCCCTACTGCTCCACCTGGGTAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR GCA 72 bp | AACCAGGAAAACCTCTCACATACCAGCCCCAGCAGCTaGCCATCTGTTTCCCAAAGCTTTGAATGTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: NQENLSHTSPSS*PSVSQSFECPS Trigger: TGAAGGACATTCAAAGCTTTGGGAAACAGATGGGCAGCTGCTGGGGCTGGTATGTGAGAGGTTTTCCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR CCA 72 bp | CCCAAAGCTTTGAATGTCCTTCACATTGGCCTCACTTaGCAGTCCTTTTGCTGGTGGTTGAAGCTGACCTGT | + |
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Preference number: 3 (lower is better) Translates to: PKALNVLHIGLT*QSFCWWLKLTC Trigger: ACAGGTCAGCTTCAACCACCAGCAAAAGGACTGCCAAGTGAGGCCAATGTGAAGGACATTCAAAGCTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR CCA 72 bp | GCTACCTGCTGTAGAGTTTCAATGAGTTTTCTGTTCTaGGCCTGGAGAGACTGTAGCTGTCGGGACATGTTC | + |
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Preference number: 3 (lower is better) Translates to: ATCCRVSMSFLF*AWRDCSCRDMF Trigger: GAACATGTCCCGACAGCTACAGTCTCTCCAGGCCCAGAACAGAAAACTCATTGAAACTCTACAGCAGGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTTGAACTTCTCATGTCTTCCTTCTCCTTCCAAGTGCTGTGACTCTAAAGGATCACATTGGCCTCACTaGGCAGTCCTTTTGCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: ALNFSCLPSPSKCCDSKGSHWPH*AVLLLV Trigger: CACCAGCAAAAGGACTGCCAAGTGAGGCCAATGTGA...TCCTTTAGAGTCACAGCACTTGGAAGGAGAAGGAAGACATGAGAAGTTCAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGCTGTGCAGATGTCACAGCTTCTCCATTTCCTCCCACGCCTGTTTAGAAACGTGAAAAGGATTCCTTaGCTGGTCTCCTACACCAAA | + |
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Preference number: 3 (lower is better) Translates to: LAVQMSQLLHFLPRLFRNVKRIP*LVSYTK Trigger: TTTGGTGTAGGAGACCAGCAAAGGAATCCTTTTCAC...GTTTCTAAACAGGCGTGGGAGGAAATGGAGAAGCTGTGACATCTGCACAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR TCA 72 bp | GGCACAGTTTTACGGCTACCTGCTGTAGAGTTTCAATaGGTTTTCTGTTCTGGGCCTGGAGAGACTGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: GTVLRLPAVEFQ*VFCSGPGETVA Trigger: AGCTACAGTCTCTCCAGGCCCAGAACAGAAAACTCATTGAAACTCTACAGCAGGTAGCCGTAAAACTGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| 3UTR CCA 72 bp | CCATCTGTTTCCCAAAGCTTTGAATGTCCTTCACATTaGCCTCACTTGGCAGTCCTTTTGCTGGTGGTTGAA | + |
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Preference number: 3 (lower is better) Translates to: PSVSQSFECPSH*PHLAVLLLVVE Trigger: TTCAACCACCAGCAAAAGGACTGCCAAGTGAGGCCAATGTGAAGGACATTCAAAGCTTTGGGAAACAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR CCA 72 bp | AATCCAGCTCTTCCTGTGTGCTTATCTTCAGCATGGTaGCATTGTCAGCCAGGCAGAAGTATTCACAACTCT | + |
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Preference number: 3 (lower is better) Translates to: NPALPVCLSSAW*HCQPGRSIHNS Trigger: AGAGTTGTGAATACTTCTGCCTGGCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCTGGATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| 3UTR CCA 72 bp | CAAAATCCAGCTCTTCCTGTGTGCTTATCTTCAGCATaGTGGCATTGTCAGCCAGGCAGAAGTATTCACAAC | + |
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Preference number: 3 (lower is better) Translates to: QNPALPVCLSSA*WHCQPGRSIHN Trigger: GTTGTGAATACTTCTGCCTGGCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCTGGATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| 3UTR GCA 72 bp | AAGTTTGTAATCTGTTTGTATTCCCCACGCAAAAGCTaGCCATTACCCTTCACAAACTTCCTGCTGTCACCC | + |
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Preference number: 3 (lower is better) Translates to: KFVICLYSPRKS*PLPFTNFLLSP Trigger: GGGTGACAGCAGGAAGTTTGTGAAGGGTAATGGGCAGCTTTTGCGTGGGGAATACAAACAGATTACAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR-3UTR CAA 90 bp | CTAGGATGGCCTGCAAATATGTACCTGAGGCTGGCCTTGAACTTCTCATGTCTTACTAGCTCATCTAGTTaGTGGCTTTGTATCAACTCT | + |
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Preference number: 3 (lower is better) Translates to: LGWPANMYLRLALNFSCLTSSSS*WLCINS Trigger: AGAGTTGATACAAAGCCACAAACTAGATGAGCTAGT...AAGACATGAGAAGTTCAAGGCCAGCCTCAGGTACATATTTGCAGGCCATCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR-3UTR CAA 90 bp | CAACATACCAACCTCAACGTCATGATTTCGCCTCAGACATTTCACTTTAGGAATTACCTGAGGCTGGCCTaGAACTTCTCATGTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QHTNLNVMISPQTFHFRNYLRLA*NFSCLP Trigger: AGGAAGACATGAGAAGTTCAAGGCCAGCCTCAGGTA...ATTCCTAAAGTGAAATGTCTGAGGCGAAATCATGACGTTGAGGTTGGTATGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR TCA 72 bp | CTGAAAGTCTTTTGTAAATCAAGGAGGACAACTCTATaGCTTCCTGGGGCTAGTCGGAGGTTCATCAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKVFCKSRRTTL*LPGASRRFINK Trigger: CTTATTGATGAACCTCCGACTAGCCCCAGGAAGTCATAGAGTTGTCCTCCTTGATTTACAAAAGACTTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR TCA 72 bp | GGAGACATGAGACAGAGGCTGATAACGTCTAGACCCTaGGAAGGGAGAAAACTGAAAGTCTTTTGTAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GDMRQRLITSRP*EGRKLKVFCKS Trigger: TGATTTACAAAAGACTTTCAGTTTTCTCCCTTCTCAGGGTCTAGACGTTATCAGCCTCTGTCTCATGTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR TCA 72 bp | GTCTCACCACCTGTCAATGCACAAGGAGTTAAGGAGTaGTGGTTTCCATTTTGTGAAAAGGATTCCTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VSPPVNAQGVKE*WFPFCEKDSFA Trigger: AGCAAAGGAATCCTTTTCACAAAATGGAAACCATCACTCCTTAACTCCTTGTGCATTGACAGGTGGTGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR TCA 72 bp | GGAGCTCATTCTATGGGAAAGGCCATGTTCTCTGTGTaGCTTTTCCTGCAGTTTATTCACAATTACCTACAC | + |
|
Preference number: 3 (lower is better) Translates to: GAHSMGKAMFSV*LFLQFIHNYLH Trigger: GTGTAGGTAATTGTGAATAAACTGCAGGAAAAGTCACACAGAGAACATGGCCTTTCCCATAGAATGAGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
||
| 3UTR GCA 72 bp | TGTCTCCATACCACTTCCATTTTTCTGGGCAAGGACTaGATCTATGTCCTCCACTTTTGTTGTAAAGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CLHTTSIFLGKD*IYVLHFCCKVH Trigger: GTGAACTTTACAACAAAAGTGGAGGACATAGATGCAGTCCTTGCCCAGAAAAATGGAAGTGGTATGGAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
||
| 3UTR GCA 72 bp | CTATGGGAAAGGCCATGTTCTCTGTGTGACTTTTCCTaGAGTTTATTCACAATTACCTACACAGCAGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: LWERPCSLCDFS*SLFTITYTAET Trigger: AGTCTCTGCTGTGTAGGTAATTGTGAATAAACTGCAGGAAAAGTCACACAGAGAACATGGCCTTTCCCATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
||
| 3UTR CCA 72 bp | CTGGTAACATTTGTCTCCATACCACTTCCATTTTTCTaGGCAAGGACTGCATCTATGTCCTCCACTTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LVTFVSIPLPFF*ARTASMSSTFV Trigger: AACAAAAGTGGAGGACATAGATGCAGTCCTTGCCCAGAAAAATGGAAGTGGTATGGAGACAAATGTTACCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
||
| 3UTR CCA 72 bp | CTGTTTGTCTCTGAGCTTCTTCAAAGGCTTGTCATCTaGCTATGTTTAGAAAAAGGATGGGAAGCATTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LFVSELLQRLVI*LCLEKGWEALT Trigger: TGTCAATGCTTCCCATCCTTTTTCTAAACATAGCCAGATGACAAGCCTTTGAAGAAGCTCAGAGACAAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCCCAAACGAACATGAAGGAAATCTCAAAGAAAACTCAAGTGGTCTCACAGACTAGCTCATCTAGTTaGTGGCTTTGTATCAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: TPQTNMKEISKKTQVVSQTSSSS*WLCINS Trigger: AGAGTTGATACAAAGCCACAAACTAGATGAGCTAGT...CTGTGAGACCACTTGAGTTTTCTTTGAGATTTCCTTCATGTTCGTTTGGGGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCAATATCCTCAGGAAAAGAAATAGCTCATTGTGTACCCGAGGGAGCTCATTCGTTACTAGGTTTCTCTaGTTGTCTACTATTTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LNILRKRNSSLCTRGSSFVTRFL*LSTISF Trigger: GAAGGAAATAGTAGACAACAAGAGAAACCTAGTAAC...GAATGAGCTCCCTCGGGTACACAATGAGCTATTTCTTTTCCTGAGGATATTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
||
| 3UTR TCA 72 bp | CTGCTTGTCCCAGTAAACCTGCATAGAATTCAATATTaGAGAACTCCCCAAACGAACATGAAGGAAATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLVPVNLHRIQY*RTPQTNMKEIS Trigger: TGAGATTTCCTTCATGTTCGTTTGGGGAGTTCTTCAATATTGAATTCTATGCAGGTTTACTGGGACAAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR TCA 72 bp | ATAGAATTCAATATTGAAGAACTCCCCAAACGAACATaGAGGAAATCTCAAAGAAAACTCAAGTGGTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: IEFNIEELPKRT*RKSQRKLKWSH Trigger: GTGAGACCACTTGAGTTTTCTTTGAGATTTCCTTCATGTTCGTTTGGGGAGTTCTTCAATATTGAATTCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR CCA 72 bp | ACCAATAGTTATGTGGACACTAGCTCATCTAGTTTGTaGCTTTGTATCAACTCTTCTATCTTCTTATGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: TNSYVDTSSSSL*LCINSSIFLCF Trigger: GAAACATAAGAAGATAGAAGAGTTGATACAAAGCCACAAACTAGATGAGCTAGTGTCCACATAACTATTGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR CCA 72 bp | TCTTTGTCTTACTTTTATTTATTTACACTGATGAGGTaGTTTAAAAGGTGGAAGCAACACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: SLSYFYLFTLMR*FKRWKQHTHTH Trigger: GTGTGTGTGTGTGTGTTGCTTCCACCTTTTAAACCACCTCATCAGTGTAAATAAATAAAAGTAAGACAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
||
| CDS-3UTR TCA 90 bp | TGCTGTAGAGTTTCAATGAGTTTTCTGTTCTGGGCCTGGAGAGACTGTAGCTGTGAGGGTGTCCCATTCTaGGTGCCTGGGCTCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: CCRVSMSFLFWAWRDCSCEGVPF*VPGLCT Trigger: CGTGCAGAGCCCAGGCACTCAGAATGGGACACCCTC...ACAGCTACAGTCTCTCCAGGCCCAGAACAGAAAACTCATTGAAACTCTACAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
||
| CDS-3UTR GCA 90 bp | CATTGGCCTCACTTGGCAGTCCTTTTGCTGGTGGTTGAAGCTGACCTGTTGACCCGAGCATGTCCCTTGTaGTGCTGTATTTGGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HWPHLAVLLLVVEADLLTRACPL*CCIWPA Trigger: TGCAGGCCAAATACAGCAGCACAAGGGACATGCTCG...GGTCAACAGGTCAGCTTCAACCACCAGCAAAAGGACTGCCAAGTGAGGCCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR GCA 90 bp | CCCAGCAGCTGCCCATCTGTTTCCCAAAGCTTTGAATGTCCTTCACATTGGCCTCTTTGCCACTGCCATTaGGGGAGAGCCCTGTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSCPSVSQSFECPSHWPLCHCH*GRALSN Trigger: ATTGGACAGGGCTCTCCCGCAATGGCAGTGGCAAAG...AGGCCAATGTGAAGGACATTCAAAGCTTTGGGAAACAGATGGGCAGCTGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037481.10 |
||
| CDS-3UTR GCA 90 bp | ATGTCTAGTCAAGAGTCTGGCTGTGCAGATGTCACAGCTTCTCCATTTCCTCCCTCCACAGCCAGGCTTTaGCACTGCCATTGCGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MSSQESGCADVTASPFPPSTARL*HCHCGR Trigger: TCTCCCGCAATGGCAGTGGCAAAGCCTGGCTGTGGA...GGGAGGAAATGGAGAAGCTGTGACATCTGCACAGCCAGACTCTTGACTAGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR GCA 90 bp | GTGCAGATGTCACAGCTTCTCCATTTCCTCCCACGCCTGTTTAGAAACCATGCTCTTTGCCACTGCCATTaGGGGAGAGCCCAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQMSQLLHFLPRLFRNHALCHCH*GRAQLF Trigger: GAAGAGCTGGGCTCTCCCGCAATGGCAGTGGCAAAG...AGCATGGTTTCTAAACAGGCGTGGGAGGAAATGGAGAAGCTGTGACATCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
||
| CDS-3UTR GCA 90 bp | AGAGTTTCAATGAGTTTTCTGTTCTGGGCCTGGAGAGACTGTAGCTGTCGGGACGTGTCCCATTCTGAGTaGCTGGGCTCTGCACGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVSMSFLFWAWRDCSCRDVSHSE*LGSARL Trigger: CAGACGTGCAGAGCCCAGGCACTCAGAATGGGACAC...GTCCCGACAGCTACAGTCTCTCCAGGCCCAGAACAGAAAACTCATTGAAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGCATGGTGGCATTGTCAGCCAGGCAGAAGTATTCACAACTCTGCCAGTGCTCTGCACGTCTGGTaGCAGTGGAGGTTCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSAWWHCQPGRSIHNSASALHVW*QWRFQN Trigger: ATTCTGGAACCTCCACTGTCACCAGACGTGCAGAGC...ACTGGCAGAGTTGTGAATACTTCTGCCTGGCTGACAATGCCACCATGCTGAAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
||
| CDS-3UTR TCA 90 bp | CTATTGCTGGTGCCACCAACCCCTAATGCTGATTTATCTCTAACCAATGAAACCGGGTGTCCCATTCTCTaGGTGCCTGGGCTCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LLLVPPTPNADLSLTNETGCPIL*VPGLCT Trigger: CGTGCAGAGCCCAGGCACTCAGAGAATGGGACACCC...GGTTTCATTGGTTAGAGATAAATCAGCATTAGGGGTTGGTGGCACCAGCAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR GCA 90 bp | CTAGGATGGCCTGCAAATATGTACCTGAGGCTGGCCTTGAACTTCTCATGTCTTTCCACAGCCAGGCTTTaGCACTGCCATTGCGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGWPANMYLRLALNFSCLSTARL*HCHCGR Trigger: TCTCCCGCAATGGCAGTGGCAAAGCCTGGCTGTGGA...AAGACATGAGAAGTTCAAGGCCAGCCTCAGGTACATATTTGCAGGCCATCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR TCA 90 bp | AAACCATGCTTCTCCCACACCCCAGTTAGTCAACATACCAACCTCAACGTCATGGCTCTGCACGTCTGGTaGCAGTGGAGGTTCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KPCFSHTPVSQHTNLNVMALHVW*QWRFQN Trigger: ATTCTGGAACCTCCACTGTCACCAGACGTGCAGAGC...CATGACGTTGAGGTTGGTATGTTGACTAACTGGGGTGTGGGAGAAGCATGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR TCA 90 bp | TCTTTCCTAGGAGACATAATTAGGGGAAAGACACAATTGATGGAGTGGTGGTTGGGGTGTCCCATTCTCTaGGTGCCTGGGCTCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SFLGDIIRGKTQLMEWWLGCPIL*VPGLCT Trigger: CGTGCAGAGCCCAGGCACTCAGAGAATGGGACACCC...CAACCACCACTCCATCAATTGTGTCTTTCCCCTAATTATGTCTCCTAGGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR GCA 90 bp | GTGCAGATGTCACAGCTTCTCCATTTCCTCCCACGCCTGTTTAGAAACCATGCTCGAGCATGTCCCTTGTaGTGCTGTATTTGGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQMSQLLHFLPRLFRNHARACPL*CCIWPA Trigger: TGCAGGCCAAATACAGCAGCACAAGGGACATGCTCG...AGCATGGTTTCTAAACAGGCGTGGGAGGAAATGGAGAAGCTGTGACATCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR CCA 90 bp | GGCACAGTAGGTGAAGTCACTTTTGCGAGCCTAGGAAAGTGTGAGCTGGACGCAATGAGTTTTCTGTTCTaGGCCTGGAGAGACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTVGEVTFASLGKCELDAMSFLF*AWRDCS Trigger: GCTACAGTCTCTCCAGGCCCAGAACAGAAAACTCAT...TGCGTCCAGCTCACACTTTCCTAGGCTCGCAAAAGTGACTTCACCTACTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR CAA 72 bp | GAATGTCCTTCACATTGGCCTCACTTGGCAGTCCTTTaGCTGGTGGTTGAAGCTGACCTGTTGACCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ECPSHWPHLAVL*LVVEADLLTPQ Trigger: TTGAGGGGTCAACAGGTCAGCTTCAACCACCAGCAAAAGGACTGCCAAGTGAGGCCAATGTGAAGGACATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR GCA 90 bp | CATTGGCCTCACTTGGCAGTCCTTTTGCTGGTGGTTGAAGCTGACCTGTTGACCTTTCTGGGCAAGGACTaGATCTATGTCCTCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HWPHLAVLLLVVEADLLTFLGKD*IYVLHF Trigger: AAAGTGGAGGACATAGATGCAGTCCTTGCCCAGAAA...GGTCAACAGGTCAGCTTCAACCACCAGCAAAAGGACTGCCAAGTGAGGCCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR GCA 90 bp | TTGGAATGTCACCACCGAGAGAAGCTCATGTCTAGTCAAGAGTCTGGCTGTGCACCAGCTCTTCCTGTGTaGTTATCTTCAGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LECHHREKLMSSQESGCAPALPV*LSSAWW Trigger: CCACCATGCTGAAGATAAGCACACAGGAAGAGCTGG...TGCACAGCCAGACTCTTGACTAGACATGAGCTTCTCTCGGTGGTGACATTCCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR CCA 90 bp | GTGTACTCATGTAGCCTAGGATGGCCTGCAAATATGTACCTGAGGCTGGCCTTGTTATCTTCAGCATGGTaGCATTGTCAGCCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VYSCSLGWPANMYLRLALLSSAW*HCQPGR Trigger: TCTGCCTGGCTGACAATGCCACCATGCTGAAGATAA...CAAGGCCAGCCTCAGGTACATATTTGCAGGCCATCCTAGGCTACATGAGTACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR CAA 72 bp | TCCCAAAGCTTTGAATGTCCTTCACATTGGCCTCACTaGGCAGTCCTTTTGCTGGTGGTTGAAGCTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQSFECPSHWPH*AVLLLVVEADL Trigger: CAGGTCAGCTTCAACCACCAGCAAAAGGACTGCCAAGTGAGGCCAATGTGAAGGACATTCAAAGCTTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR CAA 72 bp | CTAGGATGGCCTGCAAATATGTACCTGAGGCTGGCCTaGAACTTCTCATGTCTTCCTTCTCCTTCCAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGWPANMYLRLA*NFSCLPSPSKC Trigger: GCACTTGGAAGGAGAAGGAAGACATGAGAAGTTCAAGGCCAGCCTCAGGTACATATTTGCAGGCCATCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR CAA 72 bp | AGCTCTTCCTGTGTGCTTATCTTCAGCATGGTGGCATaGTCAGCCAGGCAGAAGTATTCACAACTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSCVLIFSMVA*SARQKYSQLCQ Trigger: CTGGCAGAGTTGTGAATACTTCTGCCTGGCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
||
| CDS-3UTR CCA 90 bp | GTGCAGATGTCACAGCTTCTCCATTTCCTCCCACGCCTGTTTAGAAACCATGCTATGAGTTTTCTGTTCTaGGCCTGGAGAGACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VQMSQLLHFLPRLFRNHAMSFLF*AWRDCS Trigger: GCTACAGTCTCTCCAGGCCCAGAACAGAAAACTCAT...AGCATGGTTTCTAAACAGGCGTGGGAGGAAATGGAGAAGCTGTGACATCTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR GCA 90 bp | ATGTCTAGTCAAGAGTCTGGCTGTGCAGATGTCACAGCTTCTCCATTTCCTCCCTTTCTGGGCAAGGACTaGATCTATGTCCTCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: MSSQESGCADVTASPFPPFLGKD*IYVLHF Trigger: AAAGTGGAGGACATAGATGCAGTCCTTGCCCAGAAA...GGGAGGAAATGGAGAAGCTGTGACATCTGCACAGCCAGACTCTTGACTAGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR CCA 90 bp | TTGGAATGTCACCACCGAGAGAAGCTCATGTCTAGTCAAGAGTCTGGCTGTGCACCACTTCCATTTTTCTaGGCAAGGACTGCATCTATG | + |
|
Preference number: 4 (lower is better) Translates to: LECHHREKLMSSQESGCAPLPFF*ARTASM Trigger: CATAGATGCAGTCCTTGCCCAGAAAAATGGAAGTGG...TGCACAGCCAGACTCTTGACTAGACATGAGCTTCTCTCGGTGGTGACATTCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR GCA 90 bp | CCATTTTTCTGGGCAAGGACTGCATCTATGTCCTCCACTTTTGTTGTAAAGTTCCGAGCATGTCCCTTGTaGTGCTGTATTTGGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFFWARTASMSSTFVVKFRACPL*CCIWPA Trigger: TGCAGGCCAAATACAGCAGCACAAGGGACATGCTCG...GAACTTTACAACAAAAGTGGAGGACATAGATGCAGTCCTTGCCCAGAAAAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGATGGCCTGCAAATATGTACCTGAGGCTGGCCTTGAACTTCTCATGTCTTCCACTTCCATTTTTCTaGGCAAGGACTGCATCTATG | + |
|
Preference number: 4 (lower is better) Translates to: LGWPANMYLRLALNFSCLPLPFF*ARTASM Trigger: CATAGATGCAGTCCTTGCCCAGAAAAATGGAAGTGG...AAGACATGAGAAGTTCAAGGCCAGCCTCAGGTACATATTTGCAGGCCATCCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR CAA 72 bp | TTGGCATGGTACTATTCACAAAGACCCTGTTGTGGCTaGGAATGTCACCACCGAGAGAAGCTCATGTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LAWYYSQRPCCG*ECHHREKLMSS Trigger: ACTAGACATGAGCTTCTCTCGGTGGTGACATTCCAAGCCACAACAGGGTCTTTGTGAATAGTACCATGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR CAA 72 bp | TGTATATATACGGGGCTGTATTTACAAGCCAGAGATTaGTGGACAGTGCCGCTAGCTCAGTTGCCTACACGA | + |
|
Preference number: 4 (lower is better) Translates to: CIYTGLYLQARD*WTVPLAQLPTR Trigger: TCGTGTAGGCAACTGAGCTAGCGGCACTGTCCACAAATCTCTGGCTTGTAAATACAGCCCCGTATATATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
||
| CDS-3UTR TCA 90 bp | ATGTCTAGTCAAGAGTCTGGCTGTGCAGATGTCACAGCTTCTCCATTTCCTCCCTTTCATCCTTTTCAGTaGTGCTGTCTTGCTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: MSSQESGCADVTASPFPPFHPFQ*CCLAGY Trigger: ATATCCAGCAAGACAGCATCACTGAAAAGGATGAAA...GGGAGGAAATGGAGAAGCTGTGACATCTGCACAGCCAGACTCTTGACTAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| 3UTR CAA 72 bp | AGAGTGCTCAATATCCTCAGGAAAAGAAATAGCTCATaGTGTACCCGAGGGAGCTCATTCTATGGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVLNILRKRNSS*CTRGSSFYGKG Trigger: GCCTTTCCCATAGAATGAGCTCCCTCGGGTACACAATGAGCTATTTCTTTTCCTGAGGATATTGAGCACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
||
| CDS-3UTR GCA 90 bp | AATCTATTGCTGGTGCCACCAACCCCTAATGCTGATTTATCTCTAACCAATGAACCAGCTCTTCCTGTGTaGTTATCTTCAGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLLLVPPTPNADLSLTNEPALPV*LSSAWW Trigger: CCACCATGCTGAAGATAAGCACACAGGAAGAGCTGG...TTCATTGGTTAGAGATAAATCAGCATTAGGGGTTGGTGGCACCAGCAATAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
||
| CDS-3UTR CCA 90 bp | CAACATACCAACCTCAACGTCATGATTTCGCCTCAGACATTTCACTTTAGGAATAGTAGCTCTGGGGCATaGCAAAATCCAGCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QHTNLNVMISPQTFHFRNSSSGA*QNPALP Trigger: AGGAAGAGCTGGATTTTGCCATGCCCCAGAGCTACT...ATTCCTAAAGTGAAATGTCTGAGGCGAAATCATGACGTTGAGGTTGGTATGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037481.10 |
||
| CDS-3UTR TCA 90 bp | GATGGAAGAAGAAATCAACCTATTATCTGTACAGAGGTTGTTCTGGATTTTGTTGCTCTGCACGTCTGGTaGCAGTGGAGGTTCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DGRRNQPIICTEVVLDFVALHVW*QWRFQN Trigger: ATTCTGGAACCTCCACTGTCACCAGACGTGCAGAGC...AACAAAATCCAGAACAACCTCTGTACAGATAATAGGTTGATTTCTTCTTCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| 3UTR CAA 72 bp | AGAGGAACAATGGTGATTTTTAACAGTGAAGACTGTTaGTCTCTGAGCTTCTTCAAAGGCTTGTCATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RGTMVIFNSEDC*SLSFFKGLSSG Trigger: GCCAGATGACAAGCCTTTGAAGAAGCTCAGAGACAAACAGTCTTCACTGTTAAAAATCACCATTGTTCCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| 3UTR CAA 72 bp | AGGACCAATAGTTATGTGGACACTAGCTCATCTAGTTaGTGGCTTTGTATCAACTCTTCTATCTTCTTATGT | + |
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Preference number: 4 (lower is better) Translates to: RTNSYVDTSSSS*WLCINSSIFLC Trigger: ACATAAGAAGATAGAAGAGTTGATACAAAGCCACAAACTAGATGAGCTAGTGTCCACATAACTATTGGTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| CDS-3UTR TCA 90 bp | GATGGAAGAAGAAATCAACCTATTATCTGTACAGAGGTTGTTCTGGATTTTGTTTTTCATCCTTTTCAGTaGTGCTGTCTTGCTGGATAT | + |
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Preference number: 4 (lower is better) Translates to: DGRRNQPIICTEVVLDFVFHPFQ*CCLAGY Trigger: ATATCCAGCAAGACAGCATCACTGAAAAGGATGAAA...AACAAAATCCAGAACAACCTCTGTACAGATAATAGGTTGATTTCTTCTTCCATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| CDS TCA 90 bp | AGGGTCAGGGCCACTGGGCGCCAAACTGAAGAGGGTGTCCCATTCTaGGTGCCTGGGCTCTGCACGTCTGGTGACAGTGGAGGTTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: RVRATGRQTEEGVPF*VPGLCTSGDSGGSR Trigger: TCTGGAACCTCCACTGTCACCAGACGTGCAGAGCCCAGGCACTCAGAATGGGACACCCTCTTCAGTTTGGCGCCCAGTGGCCCTGACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| CDS TCA 90 bp | CACCAAACACAAGGTCAGCAGGGTCAGGGCCACTGGGCGCCAAACTaGAGAGGGTGTCCCATTCTGAGTGCCTGGGCTCTGCACGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: HQTQGQQGQGHWAPN*RGCPILSAWALHVW Trigger: CCAGACGTGCAGAGCCCAGGCACTCAGAATGGGACACCCTCTTCAGTTTGGCGCCCAGTGGCCCTGACCCTGCTGACCTTGTGTTTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| CDS GCA 90 bp | TCAGGGCCACTGGGCGCCAAACTGAAGAGGGTGTCCCATTCTGAGTaGCTGGGCTCTGCACGTCTGGTGACAGTGGAGGTTCCAGAATAC | + |
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Preference number: 5 (lower is better) Translates to: SGPLGAKLKRVSHSE*LGSARLVTVEVPEY Trigger: GTATTCTGGAACCTCCACTGTCACCAGACGTGCAGAGCCCAGGCACTCAGAATGGGACACCCTCTTCAGTTTGGCGCCCAGTGGCCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| CDS GCA 90 bp | CAGGCTTTGCCACTGCCATTGCGGGAGAGCCCAGCTCTTCCTGTGTaGTTATCTTCAGCATGGTGGCATTGTCAGCCAGGCAGAAGTATT | + |
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Preference number: 5 (lower is better) Translates to: QALPLPLRESPALPV*LSSAWWHCQPGRSI Trigger: AATACTTCTGCCTGGCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCTGGGCTCTCCCGCAATGGCAGTGGCAAAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203162.3 ENSMUST00000204012.2 |
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| CDS GCA 90 bp | ACAGTTCAAAGGAGTAAGGTGTCCCATCTGTCCACAGCCAGGCTTTaGCACTGCCATTGCGGGAGAGCCCAGCTCTTCCTGTGTGCTTAT | + |
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Preference number: 5 (lower is better) Translates to: TVQRSKVSHLSTARL*HCHCGRAQLFLCAY Trigger: ATAAGCACACAGGAAGAGCTGGGCTCTCCCGCAATGGCAGTGGCAAAGCCTGGCTGTGGACAGATGGGACACCTTACTCCTTTGAACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| CDS CCA 90 bp | CCATTGCGGGAGAGCCCAGCTCTTCCTGTGTGCTTATCTTCAGCATaGTGGCATTGTCAGCCAGGCAGAAGTATTCACAACTCTGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: PLRESPALPVCLSSA*WHCQPGRSIHNSAS Trigger: ACTGGCAGAGTTGTGAATACTTCTGCCTGGCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCTGGGCTCTCCCGCAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203162.3 ENSMUST00000204012.2 |
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| CDS-3UTR CAA 90 bp | GCTGGAAAGCTGGCCACAGGCACAGTAGGTGAAGTCACTTTTGCGAGCCTAGGATTCAGCATGGTGGCATaGTCAGCCAGGCAGAAGTAT | + |
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Preference number: 5 (lower is better) Translates to: AGKLATGTVGEVTFASLGFSMVA*SARQKY Trigger: ATACTTCTGCCTGGCTGACAATGCCACCATGCTGAA...TCCTAGGCTCGCAAAAGTGACTTCACCTACTGTGCCTGTGGCCAGCTTTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| CDS CCA 90 bp | TTGCGGGAGAGCCCAGCTCTTCCTGTGTGCTTATCTTCAGCATGGTaGCATTGTCAGCCAGGCAGAAGTATTCACAACTCTGCCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: LRESPALPVCLSSAW*HCQPGRSIHNSASS Trigger: AGAACTGGCAGAGTTGTGAATACTTCTGCCTGGCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCTGGGCTCTCCCGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203162.3 ENSMUST00000204012.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTGTGCAGATGTCACAGCTTCTCCATTTCCTCCCACGCCTGTTTAGAAACCATCGAGCATGTCCCTaGTGCTGCTGTATTTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LAVQMSQLLHFLPRLFRNHRACP*CCCIWP Trigger: AGGCCAAATACAGCAGCACAAGGGACATGCTCGATG...GTTTCTAAACAGGCGTGGGAGGAAATGGAGAAGCTGTGACATCTGCACAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| CDS TCA 90 bp | GATGCTGTCTTGCTGGATATTAGACAGCTGGTAGAACTGAAAAACTaGGTGCCTGGGCTCTGCACGTCTGGTGACAGTGGAGGTTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: DAVLLDIRQLVELKN*VPGLCTSGDSGGSR Trigger: TCTGGAACCTCCACTGTCACCAGACGTGCAGAGCCCAGGCACTCAGTTTTTCAGTTCTACCAGCTGTCTAATATCCAGCAAGACAGCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204012.2 |
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| CDS-3UTR CAA 90 bp | GGCAAAATCCAGCTCTTCCTGTGTGCTTATCTTCAGCATGGTGGCATTGTCAGCCATCGAGCATGTCCCTaGTGCTGCTGTATTTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: GKIQLFLCAYLQHGGIVSHRACP*CCCIWP Trigger: AGGCCAAATACAGCAGCACAAGGGACATGCTCGATG...GCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCTGGATTTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| CDS-3UTR CAA 90 bp | ACAGGCACAGTAGGTGAAGTCACTTTTGCGAGCCTAGGAAAGTGTGAGCTGGACTTCAGCATGGTGGCATaGTCAGCCAGGCAGAAGTAT | + |
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Preference number: 5 (lower is better) Translates to: TGTVGEVTFASLGKCELDFSMVA*SARQKY Trigger: ATACTTCTGCCTGGCTGACAATGCCACCATGCTGAA...GTCCAGCTCACACTTTCCTAGGCTCGCAAAAGTGACTTCACCTACTGTGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| CDS TCA 90 bp | GCTGGTAGAACTGAAAAACTGAGTGCCTGGGCTCTGCACGTCTGGTaGCAGTGGAGGTTCCAGAATACAGGCTTATGGTGGTATCATCAT | + |
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Preference number: 5 (lower is better) Translates to: AGRTEKLSAWALHVW*QWRFQNTGLWWYHH Trigger: ATGATGATACCACCATAAGCCTGTATTCTGGAACCTCCACTGTCACCAGACGTGCAGAGCCCAGGCACTCAGTTTTTCAGTTCTACCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204012.2 |
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| CDS-3UTR CAA 90 bp | CTCAATATCCTCAGGAAAAGAAATAGCTCATTGTGTACCCGAGGGAGCTCATTCCATCGAGCATGTCCCTaGTGCTGCTGTATTTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LNILRKRNSSLCTRGSSFHRACP*CCCIWP Trigger: AGGCCAAATACAGCAGCACAAGGGACATGCTCGATG...GAATGAGCTCCCTCGGGTACACAATGAGCTATTTCTTTTCCTGAGGATATTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203162.3 |
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| CDS-3UTR CAA 90 bp | CTAGGATGGCCTGCAAATATGTACCTGAGGCTGGCCTTGAACTTCTCATGTCTTTTCAGTGATGCTGTCTaGCTGGATATTAGACAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LGWPANMYLRLALNFSCLFSDAV*LDIRQL Trigger: CAGCTGTCTAATATCCAGCAAGACAGCATCACTGAA...AAGACATGAGAAGTTCAAGGCCAGCCTCAGGTACATATTTGCAGGCCATCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| CDS-3UTR CAA 90 bp | GGTTGGGGTCTTCTGCTAGTTTTTCTTGGATTGCCTGTTAGGATAAAGGACACCTTCAGTGATGCTGTCTaGCTGGATATTAGACAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GWGLLLVFLGLPVRIKDTFSDAV*LDIRQL Trigger: CAGCTGTCTAATATCCAGCAAGACAGCATCACTGAA...GGTGTCCTTTATCCTAACAGGCAATCCAAGAAAAACTAGCAGAAGACCCCAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| CDS TCA 72 bp | CAAGGTCAGCAGGGTCAGGGCCACTGGGCGCCAAACTaGAGAGGGTGTCCCATTCTGAGTGCCTGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QGQQGQGHWAPN*RGCPILSAWAL Trigger: CAGAGCCCAGGCACTCAGAATGGGACACCCTCTTCAGTTTGGCGCCCAGTGGCCCTGACCCTGCTGACCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| CDS TCA 72 bp | GCCACTGGGCGCCAAACTGAAGAGGGTGTCCCATTCTaGGTGCCTGGGCTCTGCACGTCTGGTGACAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: ATGRQTEEGVPF*VPGLCTSGDSG Trigger: TCCACTGTCACCAGACGTGCAGAGCCCAGGCACTCAGAATGGGACACCCTCTTCAGTTTGGCGCCCAGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| CDS GCA 72 bp | GGGCGCCAAACTGAAGAGGGTGTCCCATTCTCTGAGTaGCTGGGCTCTGCACGTCTGGTGACAGTGGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GRQTEEGVPFSE*LGSARLVTVEV Trigger: AACCTCCACTGTCACCAGACGTGCAGAGCCCAGGCACTCAGAGAATGGGACACCCTCTTCAGTTTGGCGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037481.10 ENSMUST00000203162.3 |
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| CDS GCA 72 bp | CCACTGCCATTGCGGGAGAGCCCAGCTCTTCCTGTGTaGTTATCTTCAGCATGGTGGCATTGTCAGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PLPLRESPALPV*LSSAWWHCQPG Trigger: GCCTGGCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCTGGGCTCTCCCGCAATGGCAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203162.3 ENSMUST00000204012.2 |
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| CDS TCA 72 bp | TGTCCCATTCTGAGTGCCTGGGCTCTGCACGTCTGGTaGCAGTGGAGGTTCCAGAATACAGGCTTATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: CPILSAWALHVW*QWRFQNTGLWW Trigger: CCACCATAAGCCTGTATTCTGGAACCTCCACTGTCACCAGACGTGCAGAGCCCAGGCACTCAGAATGGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204952.2 |
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| CDS TCA 72 bp | ACTGAAAAACTGAGTGCCTGGGCTCTGCACGTCTGGTaGCAGTGGAGGTTCCAGAATACAGGCTTATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TEKLSAWALHVW*QWRFQNTGLWW Trigger: CCACCATAAGCCTGTATTCTGGAACCTCCACTGTCACCAGACGTGCAGAGCCCAGGCACTCAGTTTTTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204012.2 |
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| CDS CCA 72 bp | GAGAGCCCAGCTCTTCCTGTGTGCTTATCTTCAGCATaGTGGCATTGTCAGCCAGGCAGAAGTATTCACAAC | + |
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Preference number: 6 (lower is better) Translates to: ESPALPVCLSSA*WHCQPGRSIHN Trigger: GTTGTGAATACTTCTGCCTGGCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCTGGGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203162.3 ENSMUST00000204012.2 |
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| CDS CAA 90 bp | GGAGAGCCCAGCTCTTCCTGTGTGCTTATCTTCAGCATGGTGGCATaGTCAGCCAGGCAGAAGTATTCACAACTCTGCCAGTTCTTACTT | + |
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Preference number: 6 (lower is better) Translates to: GEPSSSCVLIFSMVA*SARQKYSQLCQFLL Trigger: AAGTAAGAACTGGCAGAGTTGTGAATACTTCTGCCTGGCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCTGGGCTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203162.3 ENSMUST00000204012.2 |
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| CDS TCA 72 bp | TTGCTGGATATTAGACAGCTGGTAGAACTGAAAAACTaGGTGCCTGGGCTCTGCACGTCTGGTGACAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LLDIRQLVELKN*VPGLCTSGDSG Trigger: TCCACTGTCACCAGACGTGCAGAGCCCAGGCACTCAGTTTTTCAGTTCTACCAGCTGTCTAATATCCAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204012.2 |
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| CDS CCA 72 bp | AGCCCAGCTCTTCCTGTGTGCTTATCTTCAGCATGGTaGCATTGTCAGCCAGGCAGAAGTATTCACAACTCT | + |
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Preference number: 6 (lower is better) Translates to: SPALPVCLSSAW*HCQPGRSIHNS Trigger: AGAGTTGTGAATACTTCTGCCTGGCTGACAATGCCACCATGCTGAAGATAAGCACACAGGAAGAGCTGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203162.3 ENSMUST00000204012.2 |
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