Pregenerated sensors for CLEC14A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045930Ensembl transcript IDs: ENSMUST00000062254.4
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATTACTCCTACCTGCAAAAGGACGCAGGAGATCCTGTACTTAACTaGCCTTATTCTGCCATTGAAACAATTTCTGGAGGTGACCACCAC | + |
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Preference number: 1 (lower is better) Translates to: HYSYLQKDAGDPVLN*PYSAIETISGGDHH Trigger: GTGGTGGTCACCTCCAGAAATTGTTTCAATGGCAGAATAAGGTCAGTTAAGTACAGGATCTCCTGCGTCCTTTTGCAGGTAGGAGTAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR TCA 90 bp | GTAATTGGAAGTGAGGATCAGCATCTTGATGCCTACAAGGTGGCTTaGATAGGAAGGTCATTACACTGGAGAACACAAACCCTGGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: VIGSEDQHLDAYKVA*IGRSLHWRTQTLEK Trigger: CTTTTCCAGGGTTTGTGTTCTCCAGTGTAATGACCTTCCTATTCAAGCCACCTTGTAGGCATCAAGATGCTGATCCTCACTTCCAATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR GCA 90 bp | GCAAGGACACACAGTAAACACTTGGATTGGTGGTCAACTGTAATTTaGTTCTGGAGTCAGAAACTGGCAACATTGCACTTCCGATTTATG | + |
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Preference number: 1 (lower is better) Translates to: ARTHSKHLDWWSTVI*FWSQKLATLHFRFM Trigger: CATAAATCGGAAGTGCAATGTTGCCAGTTTCTGACTCCAGAAGCAAATTACAGTTGACCACCAATCCAAGTGTTTACTGTGTGTCCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CCA 90 bp | ACACACAGTAAACACTTGGATTGGTGGTCAACTGTAATTTGCTTCTaGAGTCAGAAACTGGCAACATTGCACTTCCGATTTATGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: THSKHLDWWSTVICF*SQKLATLHFRFMAE Trigger: CTCTGCCATAAATCGGAAGTGCAATGTTGCCAGTTTCTGACTCCAGAAGCAAATTACAGTTGACCACCAATCCAAGTGTTTACTGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CCA 90 bp | CATTTGTTTCCTTGGGCAAGGACACACAGTAAACACTTGGATTGGTaGTCAACTGTAATTTGCTTCTGGAGTCAGAAACTGGCAACATTG | + |
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Preference number: 1 (lower is better) Translates to: HLFPWARTHSKHLDW*STVICFWSQKLATL Trigger: CAATGTTGCCAGTTTCTGACTCCAGAAGCAAATTACAGTTGACCACCAATCCAAGTGTTTACTGTGTGTCCTTGCCCAAGGAAACAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CCA 90 bp | TTTGCTTCTGGAGTCAGAAACTGGCAACATTGCACTTCCGATTTATaGCAGAGCACAGTCACAGTGACTTTGAAAGCAAAGGATAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: FASGVRNWQHCTSDL*QSTVTVTLKAKDKR Trigger: TCTTTTATCCTTTGCTTTCAAAGTCACTGTGACTGTGCTCTGCCATAAATCGGAAGTGCAATGTTGCCAGTTTCTGACTCCAGAAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CCA 90 bp | AATCATTTGTTTCCTTGGGCAAGGACACACAGTAAACACTTGGATTaGTGGTCAACTGTAATTTGCTTCTGGAGTCAGAAACTGGCAACA | + |
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Preference number: 1 (lower is better) Translates to: NHLFPWARTHSKHLD*WSTVICFWSQKLAT Trigger: TGTTGCCAGTTTCTGACTCCAGAAGCAAATTACAGTTGACCACCAATCCAAGTGTTTACTGTGTGTCCTTGCCCAAGGAAACAAATGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CCA 90 bp | GAAAGAAAGGCTGTAGGAGAGACTCCATGTTTAATTGTAAGGAAATaGGTGTGTAGGAAACTGAGTGATGAATGTGAGAGCAAAAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: ERKAVGETPCLIVRK*VCRKLSDECESKRL Trigger: AAGCCTTTTGCTCTCACATTCATCACTCAGTTTCCTACACACCCATTTCCTTACAATTAAACATGGAGTCTCTCCTACAGCCTTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR TCA 90 bp | ATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGAATaGATGGCTAAAATGAAGTGCAGGTCATTGGGTCTGAAGAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: MGKKFRINLICVAME*MAKMKCRSLGLKSK Trigger: CTTACTCTTCAGACCCAATGACCTGCACTTCATTTTAGCCATTCATTCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCCTGCAAAGACTCTTGCTCAGTTGTAACAACCCCCTGATGCACACACATTCTGGAGTCAGAAACTaGCAACATTGCACTTCCGAT | + |
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Preference number: 2 (lower is better) Translates to: FCLQRLLLSCNNPLMHTHSGVRN*QHCTSD Trigger: ATCGGAAGTGCAATGTTGCCAGTTTCTGACTCCAGA...ATGTGTGTGCATCAGGGGGTTGTTACAACTGAGCAAGAGTCTTTGCAGGCAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR TCA 90 bp | TTCGGGCCCCAGAACCACACTGTCATCTGTTACATGTTATGTGATAACTATGCACCCAATTGTTGGGACTaGAAAAGTCTAGGCAAGATG | + |
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Preference number: 2 (lower is better) Translates to: FGPQNHTVICYMLCDNYAPNCWD*KSLGKM Trigger: CATCTTGCCTAGACTTTTTCAGTCCCAACAATTGGG...TGCATAGTTATCACATAACATGTAACAGATGACAGTGTGGTTCTGGGGCCCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR CCA 90 bp | AGAAACAGAAATGGCTTGACATTCAAGTGTCCCCAGCCCCCACCCACATGGATTAAACACTTGGATTGGTaGTCAACTGTAATTTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: RNRNGLTFKCPQPPPTWIKHLDW*STVICF Trigger: GAAGCAAATTACAGTTGACCACCAATCCAAGTGTTT...AATCCATGTGGGTGGGGGCTGGGGACACTTGAATGTCAAGCCATTTCTGTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCCTGCAAAGACTCTTGCTCAGTTGTAACAACCCCCTGATGCACACACATGGAGAACACAAACCCTaGAAAAGGAAGACACAAATC | + |
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Preference number: 2 (lower is better) Translates to: FCLQRLLLSCNNPLMHTHGEHKP*KRKTQI Trigger: GATTTGTGTCTTCCTTTTCCAGGGTTTGTGTTCTCC...ATGTGTGTGCATCAGGGGGTTGTTACAACTGAGCAAGAGTCTTTGCAGGCAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR GCA 90 bp | AGAAACTGGCAACATTGCACTTCCGATTTATGGCAGAGCACAGTCACAGTGACTAAACTCATAGCCAGTTaGTATCCTCAGAATGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: RNWQHCTSDLWQSTVTVTKLIAS*YPQNGV Trigger: TACACCATTCTGAGGATAGCAACTGGCTATGAGTTT...AGTCACTGTGACTGTGCTCTGCCATAAATCGGAAGTGCAATGTTGCCAGTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR CCA 90 bp | CACCCACATGGATTAAATAGGACACAAGAATCTAGCAACCTTGGAAGAAGCAAATGCACTTCCGATTTATaGCAGAGCACAGTCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: HPHGLNRTQESSNLGRSKCTSDL*QSTVTV Trigger: CACTGTGACTGTGCTCTGCCATAAATCGGAAGTGCA...TTTGCTTCTTCCAAGGTTGCTAGATTCTTGTGTCCTATTTAATCCATGTGGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCCTGCAAAGACTCTTGCTCAGTTGTAACAACCCCCTGATGCACACACATACTGTAATTTGCTTCTaGAGTCAGAAACTGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: FCLQRLLLSCNNPLMHTHTVICF*SQKLAT Trigger: TGTTGCCAGTTTCTGACTCCAGAAGCAAATTACAGT...ATGTGTGTGCATCAGGGGGTTGTTACAACTGAGCAAGAGTCTTTGCAGGCAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CAA 90 bp | GACACAAATCATTTGTTTCCTTGGGCAAGGACACACAGTAAACACTaGGATTGGTGGTCAACTGTAATTTGCTTCTGGAGTCAGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: DTNHLFPWARTHSKH*DWWSTVICFWSQKL Trigger: CAGTTTCTGACTCCAGAAGCAAATTACAGTTGACCACCAATCCAAGTGTTTACTGTGTGTCCTTGCCCAAGGAAACAAATGATTTGTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CAA 90 bp | ATAGGACACAAGAATCTAGCAACCTTGGAAGAAGCAAAGCTTCCTTaGGCTTTAGTGCACCCAGAAGATTTCAAATCAATACGTAGCATT | + |
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Preference number: 2 (lower is better) Translates to: IGHKNLATLEEAKLP*ALVHPEDFKSIRSI Trigger: AATGCTACGTATTGATTTGAAATCTTCTGGGTGCACTAAAGCCAAAGGAAGCTTTGCTTCTTCCAAGGTTGCTAGATTCTTGTGTCCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR GCA 90 bp | GAGGTCTGGGATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGATGGTCAACTGTAATTTaGTTCTGGAGTCAGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: EVWDGEEIQNQLNLCSYGWSTVI*FWSQKL Trigger: CAGTTTCTGACTCCAGAAGCAAATTACAGTTGACCA...TCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCATCCCAGACCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGGTCATTACACTGGAGAACACAAACCCTGGAAAAGGAAGACACAAATCATTAGTAAACACTTGGATTaGTGGTCAACTGTAATTTGC | + |
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Preference number: 2 (lower is better) Translates to: EGHYTGEHKPWKRKTQIISKHLD*WSTVIC Trigger: GCAAATTACAGTTGACCACCAATCCAAGTGTTTACT...AATGATTTGTGTCTTCCTTTTCCAGGGTTTGTGTTCTCCAGTGTAATGACCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTGGGATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGAAACACTATTAATTCTGTaGAAAGCAATTTCCCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: RSGMGKKFRINLICVAMETLLIL*KAISPS Trigger: ACTAGGGGAAATTGCTTTCCACAGAATTAATAGTGT...TTCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCATCCCAGACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR CAA 90 bp | AGAAACAGAAATGGCTTGACATTCAAGTGTCCCCAGCCCCCACCCACATGGATTTTCTTTCCCCAATTGTaGGGACTGAAAAAGTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: RNRNGLTFKCPQPPPTWIFFPQL*GLKKSR Trigger: CCTAGACTTTTTCAGTCCCAACAATTGGGGAAAGAA...AATCCATGTGGGTGGGGGCTGGGGACACTTGAATGTCAAGCCATTTCTGTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CCA 72 bp | GGAGTCAGAAACTGGCAACATTGCACTTCCGATTTATaGCAGAGCACAGTCACAGTGACTTTGAAAGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: GVRNWQHCTSDL*QSTVTVTLKAK Trigger: CTTTGCTTTCAAAGTCACTGTGACTGTGCTCTGCCATAAATCGGAAGTGCAATGTTGCCAGTTTCTGACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR TCA 72 bp | GCCTGCAAAGACTCTTGCTCAGTTGTAACAACCCCCTaGTGCACACACATTGTCATTGTATTCACAATCTAT | + |
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Preference number: 3 (lower is better) Translates to: ACKDSCSVVTTP*CTHIVIVFTIY Trigger: ATAGATTGTGAATACAATGACAATGTGTGTGCATCAGGGGGTTGTTACAACTGAGCAAGAGTCTTTGCAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR TCA 72 bp | ACAATGCTAAGAACAAGTAAAACTGGAATATGTAGCTaGCCAGATGAGGAACTTGGTGGGAGCCATTTACCC | + |
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Preference number: 3 (lower is better) Translates to: TMLRTSKTGICS*PDEELGGSHLP Trigger: GGGTAAATGGCTCCCACCAAGTTCCTCATCTGGTCAGCTACATATTCCAGTTTTACTTGTTCTTAGCATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR TCA 72 bp | TACCTGCAAAAGGACGCAGGAGATCCTGTACTTAACTaGCCTTATTCTGCCATTGAAACAATTTCTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: YLQKDAGDPVLN*PYSAIETISGG Trigger: ACCTCCAGAAATTGTTTCAATGGCAGAATAAGGTCAGTTAAGTACAGGATCTCCTGCGTCCTTTTGCAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR GCA 72 bp | CACAGTAAACACTTGGATTGGTGGTCAACTGTAATTTaGTTCTGGAGTCAGAAACTGGCAACATTGCACTTC | + |
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Preference number: 3 (lower is better) Translates to: HSKHLDWWSTVI*FWSQKLATLHF Trigger: GAAGTGCAATGTTGCCAGTTTCTGACTCCAGAAGCAAATTACAGTTGACCACCAATCCAAGTGTTTACTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CCA 72 bp | GCTGTAGGAGAGACTCCATGTTTAATTGTAAGGAAATaGGTGTGTAGGAAACTGAGTGATGAATGTGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: AVGETPCLIVRK*VCRKLSDECES Trigger: GCTCTCACATTCATCACTCAGTTTCCTACACACCCATTTCCTTACAATTAAACATGGAGTCTCTCCTACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR GCA 72 bp | ACCCTTGTGTGTCTTACCAGTAAACTCATAGCCAGTTaGTATCCTCAGAATGGTGTATTCCTAAATAACACC | + |
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Preference number: 3 (lower is better) Translates to: TLVCLTSKLIAS*YPQNGVFLNNT Trigger: GGTGTTATTTAGGAATACACCATTCTGAGGATAGCAACTGGCTATGAGTTTACTGGTAAGACACACAAGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CCA 72 bp | AAACACTTGGATTGGTGGTCAACTGTAATTTGCTTCTaGAGTCAGAAACTGGCAACATTGCACTTCCGATTT | + |
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Preference number: 3 (lower is better) Translates to: KHLDWWSTVICF*SQKLATLHFRF Trigger: AAATCGGAAGTGCAATGTTGCCAGTTTCTGACTCCAGAAGCAAATTACAGTTGACCACCAATCCAAGTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR CAA 90 bp | GAGGTCTGGGATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGAGTGGTCAACTGTAATTaGCTTCTGGAGTCAGAAACT | + |
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Preference number: 3 (lower is better) Translates to: EVWDGEEIQNQLNLCSYGVVNCN*LLESET Trigger: AGTTTCTGACTCCAGAAGCAAATTACAGTTGACCAC...TCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCATCCCAGACCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR CAA 90 bp | GAGGTCTGGGATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGACCTGATGCACACACATaGTCATTGTATTCACAATCT | + |
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Preference number: 3 (lower is better) Translates to: EVWDGEEIQNQLNLCSYGPDAHT*SLYSQS Trigger: AGATTGTGAATACAATGACAATGTGTGTGCATCAGG...TCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCATCCCAGACCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR CAA 90 bp | TGTATTCACAATCTATTGAGAAGAAACAGAAATGGCTTGACATTCAAGTGTCCCACACACAGTAAACACTaGGATTGGTGGTCAACTGTA | + |
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Preference number: 3 (lower is better) Translates to: CIHNLLRRNRNGLTFKCPTHSKH*DWWSTV Trigger: TACAGTTGACCACCAATCCAAGTGTTTACTGTGTGT...GGGACACTTGAATGTCAAGCCATTTCTGTTTCTTCTCAATAGATTGTGAATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR-3UTR CAA 90 bp | AACACTTACAAAAATCGCAGCACTCTAATCTACCTGAAATATTCTCCAAGGTCTGAAGACACAAATCATTaGTTTCCTTGGGCAAGGACA | + |
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Preference number: 3 (lower is better) Translates to: NTYKNRSTLIYLKYSPRSEDTNH*FPWART Trigger: TGTCCTTGCCCAAGGAAACAAATGATTTGTGTCTTC...AGACCTTGGAGAATATTTCAGGTAGATTAGAGTGCTGCGATTTTTGTAAGTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR TCA 72 bp | AAATTCAGAATCAACTTAATTTGTGTAGCTATGGAATaGATGGCTAAAATGAAGTGCAGGTCATTGGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: KFRINLICVAME*MAKMKCRSLGL Trigger: CAGACCCAATGACCTGCACTTCATTTTAGCCATTCATTCCATAGCTACACAAATTAAGTTGATTCTGAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR TCA 90 bp | AGAAACAGAAATGGCTTGACATTCAAGTGTCCCCAGCCCCCACCCACATGGATTAGCAGGAGCACAGCTTaGAACTCCGAGCCTGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: RNRNGLTFKCPQPPPTWISRSTA*NSEPEC Trigger: GCACTCAGGCTCGGAGTTTCAAGCTGTGCTCCTGCT...AATCCATGTGGGTGGGGGCTGGGGACACTTGAATGTCAAGCCATTTCTGTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR TCA 90 bp | AGAAACAGAAATGGCTTGACATTCAAGTGTCCCCAGCCCCCACCCACATGGATTCCATCGGTGCGCAGATaGCAGCGCATCTCCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: RNRNGLTFKCPQPPPTWIPSVRR*QRISFQ Trigger: TTGGAAGGAGATGCGCTGTCATCTGCGCACCGATGG...AATCCATGTGGGTGGGGGCTGGGGACACTTGAATGTCAAGCCATTTCTGTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | TTTTGCCTGCAAAGACTCTTGCTCAGTTGTAACAACCCCCTGATGCACACACATACTCCCCTGGTGGCCTaGAGCGCAGCGCACTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FCLQRLLLSCNNPLMHTHTPLVA*SAAHFL Trigger: GAGAAAGTGCGCTGCGCTCCAGGCCACCAGGGGAGT...ATGTGTGTGCATCAGGGGGTTGTTACAACTGAGCAAGAGTCTTTGCAGGCAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | AGAAACTGGCAACATTGCACTTCCGATTTATGGCAGAGCACAGTCACAGTGACTATTAGAGGCGGCTCCTaGGCGAGGTGCAGGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: RNWQHCTSDLWQSTVTVTIRGGS*ARCRAQ Trigger: CTGTGCCCTGCACCTCGCCCAGGAGCCGCCTCTAAT...AGTCACTGTGACTGTGCTCTGCCATAAATCGGAAGTGCAATGTTGCCAGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | AGAAACTGGCAACATTGCACTTCCGATTTATGGCAGAGCACAGTCACAGTGACTAGAACAGAAGATCTTTaGAGCCTCCGCCAGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: RNWQHCTSDLWQSTVTVTRTEDL*SLRQAR Trigger: CCGGGCCTGGCGGAGGCTCCAAAGATCTTCTGTTCT...AGTCACTGTGACTGTGCTCTGCCATAAATCGGAAGTGCAATGTTGCCAGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | TTTTGCCTGCAAAGACTCTTGCTCAGTTGTAACAACCCCCTGATGCACACACATTCCTGGTGGGCAACTTaGTCCCCTCGAGGGTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: FCLQRLLLSCNNPLMHTHSWWAT*SPRGLA Trigger: AGCTAACCCTCGAGGGGACCAAGTTGCCCACCAGGA...ATGTGTGTGCATCAGGGGGTTGTTACAACTGAGCAAGAGTCTTTGCAGGCAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR TCA 90 bp | AGAAACAGAAATGGCTTGACATTCAAGTGTCCCCAGCCCCCACCCACATGGATTCTGCACATTCGCAGGTaGAGTCTCCCAAGTGATCTA | + |
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Preference number: 4 (lower is better) Translates to: RNRNGLTFKCPQPPPTWILHIRR*SLPSDL Trigger: TAGATCACTTGGGAGACTTCACCTGCGAATGTGCAG...AATCCATGTGGGTGGGGGCTGGGGACACTTGAATGTCAAGCCATTTCTGTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR GCA 90 bp | AGAAACTGGCAACATTGCACTTCCGATTTATGGCAGAGCACAGTCACAGTGACTTGCACTGTGAGATGCTaGGTTCCAGAGCCACCCAGA | + |
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Preference number: 4 (lower is better) Translates to: RNWQHCTSDLWQSTVTVTCTVRC*VPEPPR Trigger: TCTGGGTGGCTCTGGAACGCAGCATCTCACAGTGCA...AGTCACTGTGACTGTGCTCTGCCATAAATCGGAAGTGCAATGTTGCCAGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR GCA 90 bp | GAAGGTCATTACACTGGAGAACACAAACCCTGGAAAAGGAAGACACAAATCATTGGCTCCTGGGCGAGGTaGAGGGCACAGAACCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: EGHYTGEHKPWKRKTQIIGSWAR*RAQNLK Trigger: TTTGAGGTTCTGTGCCCTGCACCTCGCCCAGGAGCC...AATGATTTGTGTCTTCCTTTTCCAGGGTTTGTGTTCTCCAGTGTAATGACCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR TCA 90 bp | TTCGGGCCCCAGAACCACACTGTCATCTGTTACATGTTATGTGATAACTATGCAAAAGGCTCTTTCTCCTaGGTGCACTGTGAGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: FGPQNHTVICYMLCDNYAKGSFS*VHCEML Trigger: CAGCATCTCACAGTGCACTCAGGAGAAAGAGCCTTT...TGCATAGTTATCACATAACATGTAACAGATGACAGTGTGGTTCTGGGGCCCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR GCA 90 bp | TTCTTTCCCCAATTGTTGGGACTGAAAAAGTCTAGGCAAGATGTGAGCATTGAGCAGCTCAAAGCCCACTaGACATTCGCAGGTGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: FFPQLLGLKKSRQDVSIEQLKAH*TFAGEV Trigger: GACTTCACCTGCGAATGTGCAGTGGGCTTTGAGCTG...CTCAATGCTCACATCTTGCCTAGACTTTTTCAGTCCCAACAATTGGGGAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | AGAAACTGGCAACATTGCACTTCCGATTTATGGCAGAGCACAGTCACAGTGACTGTCATAGACCTGACCTaGCCATGTTCTGTTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RNWQHCTSDLWQSTVTVTVIDLT*PCSVCH Trigger: GTGACAAACAGAACATGGCCAGGTCAGGTCTATGAC...AGTCACTGTGACTGTGCTCTGCCATAAATCGGAAGTGCAATGTTGCCAGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | TTCTTTCCCCAATTGTTGGGACTGAAAAAGTCTAGGCAAGATGTGAGCATTGAGCTGTGGCATCTCTCCTaGCTTGTCATAGACCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: FFPQLLGLKKSRQDVSIELWHLS*LVIDLT Trigger: GGTCAGGTCTATGACAAGCCAGGAGAGATGCCACAG...CTCAATGCTCACATCTTGCCTAGACTTTTTCAGTCCCAACAATTGGGGAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | TTTTGCCTGCAAAGACTCTTGCTCAGTTGTAACAACCCCCTGATGCACACACATCATTGTGTAGAACTGTaGTGCAAAGAGGTAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FCLQRLLLSCNNPLMHTHHCVEL*CKEVAS Trigger: CGAGGCTACCTCTTTGCACCACAGTTCTACACAATG...ATGTGTGTGCATCAGGGGGTTGTTACAACTGAGCAAGAGTCTTTGCAGGCAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CAA 72 bp | TGTATTCACAATCTATTGAGAAGAAACAGAAATGGCTaGACATTCAAGTGTCCCCAGCCCCCACCCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: CIHNLLRRNRNG*TFKCPQPPPTW Trigger: CCATGTGGGTGGGGGCTGGGGACACTTGAATGTCAAGCCATTTCTGTTTCTTCTCAATAGATTGTGAATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR TCA 90 bp | CACCCACATGGATTAAATAGGACACAAGAATCTAGCAACCTTGGAAGAAGCAAACTGATGGTGTGCCAGTaGCTTTTGGCTTGGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HPHGLNRTQESSNLGRSKLMVCQ*LLAWFV Trigger: CACAAACCAAGCCAAAAGTCACTGGCACACCATCAG...TTTGCTTCTTCCAAGGTTGCTAGATTCTTGTGTCCTATTTAATCCATGTGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR TCA 90 bp | AACACTTACAAAAATCGCAGCACTCTAATCTACCTGAAATATTCTCCAAGGTCTCAGGACCACGCTTCCTaGTGGTGTGCCAGTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NTYKNRSTLIYLKYSPRSQDHAS*WCASDF Trigger: AAAGTCACTGGCACACCATCAGGAAGCGTGGTCCTG...AGACCTTGGAGAATATTTCAGGTAGATTAGAGTGCTGCGATTTTTGTAAGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR TCA 90 bp | GAGGTCTGGGATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGACTATGCTCACAAGTATaGAGACCACCGTGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVWDGEEIQNQLNLCSYGLCSQV*RPPWKR Trigger: CCTCTTCCACGGTGGTCTTCATACTTGTGAGCATAG...TCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCATCCCAGACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR TCA 90 bp | AACACTTACAAAAATCGCAGCACTCTAATCTACCTGAAATATTCTCCAAGGTCTACATTCCACACCTGGTaGGTCCAAAGCTCCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTYKNRSTLIYLKYSPRSTFHTW*VQSSLP Trigger: GGGAAGGGAGCTTTGGACTCACCAGGTGTGGAATGT...AGACCTTGGAGAATATTTCAGGTAGATTAGAGTGCTGCGATTTTTGTAAGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | GAGGTCTGGGATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGAAGCCGGAAGGGAGCTTaGAAACTCAAATTAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EVWDGEEIQNQLNLCSYGSRKGA*KLKLEA Trigger: CGCCTCTAATTTGAGTTTCCAAGCTCCCTTCCGGCT...TCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCATCCCAGACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CAA 72 bp | ACTGTAATTTGCTTCTGGAGTCAGAAACTGGCAACATaGCACTTCCGATTTATGGCAGAGCACAGTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVICFWSQKLAT*HFRFMAEHSHS Trigger: ACTGTGACTGTGCTCTGCCATAAATCGGAAGTGCAATGTTGCCAGTTTCTGACTCCAGAAGCAAATTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR GCA 90 bp | AGGTCTGGGATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGAACCTCAAACTGGTACTTaGATAGGTAGCCATCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSGMGKKFRINLICVAMEPQTGT*IGSHRC Trigger: GCACCGATGGCTACCTATGCAAGTACCAGTTTGAGG...TTCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCATCCCAGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | ACTTACAAAAATCGCAGCACTCTAATCTACCTGAAATATTCTCCAAGGTCTTTGGCGCTTGTCTCTTCCTaGATGCAGGTGGACGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TYKNRSTLIYLKYSPRSLALVSS*MQVDET Trigger: TGTTTCGTCCACCTGCATCCAGGAAGAGACAAGCGC...CAAAGACCTTGGAGAATATTTCAGGTAGATTAGAGTGCTGCGATTTTTGTAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | AGGTCTGGGATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGAAAATCTCAGTGACCTGTaGCATCTCTCCTGGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSGMGKKFRINLICVAMENLSDL*HLSWLV Trigger: GACAAGCCAGGAGAGATGCCACAGGTCACTGAGATT...TTCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCATCCCAGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | GAGGTCTGGGATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGATGTGCCAGTGACTTTTaGCTTGGTTTGTGGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EVWDGEEIQNQLNLCSYGCASDF*LGLWGL Trigger: AAGACCCCACAAACCAAGCCAAAAGTCACTGGCACA...TCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCATCCCAGACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CAA 72 bp | CATTTGTTTCCTTGGGCAAGGACACACAGTAAACACTaGGATTGGTGGTCAACTGTAATTTGCTTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLFPWARTHSKH*DWWSTVICFWS Trigger: ACTCCAGAAGCAAATTACAGTTGACCACCAATCCAAGTGTTTACTGTGTGTCCTTGCCCAAGGAAACAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR TCA 90 bp | AACACTTACAAAAATCGCAGCACTCTAATCTACCTGAAATATTCTCCAAGGTCTCTCTGTGTTCCCCACTaGAGAATCTCAGTGACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTYKNRSTLIYLKYSPRSLCVPH*RISVTC Trigger: ACAGGTCACTGAGATTCTTCAGTGGGGAACACAGAG...AGACCTTGGAGAATATTTCAGGTAGATTAGAGTGCTGCGATTTTTGTAAGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR GCA 90 bp | AACACTTACAAAAATCGCAGCACTCTAATCTACCTGAAATATTCTCCAAGGTCTTGTGTAGAACTGTGGTaGAAAGAGGTAGCCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTYKNRSTLIYLKYSPRSCVELW*KEVASA Trigger: TGCCGAGGCTACCTCTTTGCACCACAGTTCTACACA...AGACCTTGGAGAATATTTCAGGTAGATTAGAGTGCTGCGATTTTTGTAAGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | GAGGTCTGGGATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGAGCTGTTCTTCAACTTTaGTCTCACAAGAACGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EVWDGEEIQNQLNLCSYGAVLQL*SHKNVR Trigger: ACGGACGTTCTTGTGAGACCAAAGTTGAAGAACAGC...TCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCATCCCAGACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CCA 90 bp | GAAGGTCATTACACTGGAGAACACAAACCCTGGAAAAGGAAGACACAAATCATTGAGGAACGGCTTTTGTaGAAGCAGAGTTTGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGHYTGEHKPWKRKTQIIEERLL*KQSLKS Trigger: GCTTTTCAAACTCTGCTTCCACAAAAGCCGTTCCTC...AATGATTTGTGTCTTCCTTTTCCAGGGTTTGTGTTCTCCAGTGTAATGACCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| 3UTR CAA 72 bp | AGAACACAAACCCTGGAAAAGGAAGACACAAATCATTaGTTTCCTTGGGCAAGGACACACAGTAAACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTQTLEKEDTNH*FPWARTHSKHL Trigger: CAAGTGTTTACTGTGTGTCCTTGCCCAAGGAAACAAATGATTTGTGTCTTCCTTTTCCAGGGTTTGTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 90 bp | GGCCGAACAAGCTGCGCGATCGGCCGTGGGATGCTCCCCATTCCCTaGCCGAGGCCAGAACGCAGGACAGAGGAGGCACAGGGCAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRTSCAIGRGMLPIP*PRPERRTEEAQGKR Trigger: GCGCTTGCCCTGTGCCTCCTCTGTCCTGCGTTCTGGCCTCGGCCAGGGAATGGGGAGCATCCCACGGCCGATCGCGCAGCTTGTTCGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 90 bp | GGTAGCGTGGTGAAGGCTGTAGCAAGCCCCCGAGGCCGAACAAGCTaGGCGATCGGCCGTGGGATGCTCCCCATTCCCTGGCCGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSVVKAVASPRGRTS*AIGRGMLPIPWPRP Trigger: TGGCCTCGGCCAGGGAATGGGGAGCATCCCACGGCCGATCGCGCAGCTTGTTCGGCCTCGGGGGCTTGCTACAGCCTTCACCACGCTACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 90 bp | GGCTGTAGCAAGCCCCCGAGGCCGAACAAGCTGCGCGATCGGCCGTaGGATGCTCCCCATTCCCTGGCCGAGGCCAGAACGCAGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GCSKPPRPNKLRDRP*DAPHSLAEARTQDR Trigger: TCTGTCCTGCGTTCTGGCCTCGGCCAGGGAATGGGGAGCATCCCACGGCCGATCGCGCAGCTTGTTCGGCCTCGGGGGCTTGCTACAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 90 bp | CCTCCGCCAGGCCCGGGACCTGCACGCAAGAGCAGGAGCACAGCTTaGAACTCCGAGCCTGAGTGCACGGTGCTGAGAGTCCCGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPPGPGPARKSRSTA*NSEPECTVLRVPPL Trigger: AAGGGGCGGGACTCTCAGCACCGTGCACTCAGGCTCGGAGTTTCAAGCTGTGCTCCTGCTCTTGCGTGCAGGTCCCGGGCCTGGCGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 90 bp | AGAGCAGGAGCACAGCTTGAAACTCCGAGCCTGAGTGCACGGTGCTaGGAGTCCCGCCCCTTAGGCTGCAGGCCTCCTCCGCCGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAGAQLETPSLSARC*ESRPLGCRPPPPPF Trigger: GAAGGGCGGCGGAGGAGGCCTGCAGCCTAAGGGGCGGGACTCTCAGCACCGTGCACTCAGGCTCGGAGTTTCAAGCTGTGCTCCTGCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 90 bp | AAAGGTCCCCAGGACACATCGCACTCACCTCTGTCCCAGGAGGGCTaGAGTCCAGCGCGGAGCTGCTCAGCCGGAAGGGAGCTTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KGPQDTSHSPLSQEG*SPARSCSAGRELGN Trigger: GTTTCCAAGCTCCCTTCCGGCTGAGCAGCTCCGCGCTGGACTTCAGCCCTCCTGGGACAGAGGTGAGTGCGATGTGTCCTGGGGACCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 90 bp | ACTGTGAGATGCTGCGTTCCAGAGCCACCCAGAACAGAAGATCTTTaGAGCCTCCGCCAGGCCCGGGACCTGCACGCAAGAGCAGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVRCCVPEPPRTEDL*SLRQARDLHARAGA Trigger: TGCTCCTGCTCTTGCGTGCAGGTCCCGGGCCTGGCGGAGGCTCCAAAGATCTTCTGTTCTGGGTGGCTCTGGAACGCAGCATCTCACAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 90 bp | CGGCTCCTGGGCGAGGTGCAGGGCACAGAACCTCAAACTGGTACTTaGATAGGTAGCCATCGGTGCGCAGATGACAGCGCATCTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLLGEVQGTEPQTGT*IGSHRCADDSASPS Trigger: GGAAGGAGATGCGCTGTCATCTGCGCACCGATGGCTACCTATGCAAGTACCAGTTTGAGGTTCTGTGCCCTGCACCTCGCCCAGGAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 90 bp | GATGACAGCGCATCTCCTTCCAACCAGCAGGCTCCACTCCCCTGGTaGCCTGGAGCGCAGCGCACTTTCTCACTGTACAGGAACGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DDSASPSNQQAPLPW*PGAQRTFSLYRNVV Trigger: CACAACGTTCCTGTACAGTGAGAAAGTGCGCTGCGCTCCAGGCCACCAGGGGAGTGGAGCCTGCTGGTTGGAAGGAGATGCGCTGTCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 90 bp | GCAGATGACAGCGCATCTCCTTCCAACCAGCAGGCTCCACTCCCCTaGTGGCCTGGAGCGCAGCGCACTTTCTCACTGTACAGGAACGTT | + |
|
Preference number: 5 (lower is better) Translates to: ADDSASPSNQQAPLP*WPGAQRTFSLYRNV Trigger: AACGTTCCTGTACAGTGAGAAAGTGCGCTGCGCTCCAGGCCACCAGGGGAGTGGAGCCTGCTGGTTGGAAGGAGATGCGCTGTCATCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 90 bp | GGAACAGGGGCAGAGCACTGTCCCAGGGAAAAGCCCGTCCCAGTGTaGGCTTGTCTCTTCCTGGATGCAGGTGGACGAAACAGAAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GTGAEHCPREKPVPV*ACLFLDAGGRNRKV Trigger: GACCTTTCTGTTTCGTCCACCTGCATCCAGGAAGAGACAAGCGCACACTGGGACGGGCTTTTCCCTGGGACAGTGCTCTGCCCCTGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 90 bp | GGAAAAGCCCGTCCCAGTGTGCGCTTGTCTCTTCCTGGATGCAGGTaGACGAAACAGAAAGGTCCCCAGGACACATCGCACTCACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKARPSVRLSLPGCR*TKQKGPQDTSHSPL Trigger: CAGAGGTGAGTGCGATGTGTCCTGGGGACCTTTCTGTTTCGTCCACCTGCATCCAGGAAGAGACAAGCGCACACTGGGACGGGCTTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 90 bp | CCCAGCTCAAAGCCCACTGCACATTCGCAGGTGAAGTCTCCCAAGTaGTCTAGACAGTCAGGGAGCTCCACACACTTGCCAGCAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSSKPTAHSQVKSPK*SRQSGSSTHLPARR Trigger: CCTCCTTGCTGGCAAGTGTGTGGAGCTCCCTGACTGTCTAGATCACTTGGGAGACTTCACCTGCGAATGTGCAGTGGGCTTTGAGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 90 bp | CAGGGCACAGAACCTCAAACTGGTACTTGCATAGGTAGCCATCGGTaGGCAGATGACAGCGCATCTCCTTCCAACCAGCAGGCTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: QGTEPQTGTCIGSHR*ADDSASPSNQQAPL Trigger: GAGTGGAGCCTGCTGGTTGGAAGGAGATGCGCTGTCATCTGCGCACCGATGGCTACCTATGCAAGTACCAGTTTGAGGTTCTGTGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 90 bp | GAGTCCGGGTGCAACCAGGAGAAACCCCTTAAAGGCTCTTTCTCCTaGGTGCACTGTGAGATGCTGCGTTCCAGAGCCACCCAGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESGCNQEKPLKGSFS*VHCEMLRSRATQNR Trigger: TCTGTTCTGGGTGGCTCTGGAACGCAGCATCTCACAGTGCACTCAGGAGAAAGAGCCTTTAAGGGGTTTCTCCTGGTTGCACCCGGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 90 bp | AACGTCCGTCCTTCCCCAGCTCAAAGCCCACTGCACATTCGCAGGTaGAGTCTCCCAAGTGATCTAGACAGTCAGGGAGCTCCACACACT | + |
|
Preference number: 5 (lower is better) Translates to: NVRPSPAQSPLHIRR*SLPSDLDSQGAPHT Trigger: AGTGTGTGGAGCTCCCTGACTGTCTAGATCACTTGGGAGACTTCACCTGCGAATGTGCAGTGGGCTTTGAGCTGGGGAAGGACGGACGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 90 bp | ACTGTGGTGCAAAGAGGTAGCCTCGGCATCACATTCCACACCTGGTaGGTCCAAAGCTCCCTTCCCTGTCCTGGAGGAACGGCTTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TVVQRGSLGITFHTW*VQSSLPCPGGTAFV Trigger: CACAAAAGCCGTTCCTCCAGGACAGGGAAGGGAGCTTTGGACTCACCAGGTGTGGAATGTGATGCCGAGGCTACCTCTTTGCACCACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 90 bp | TGGTGGGCAACTTGGTCCCCTCGAGGGTTAGCTGTTCTTCAACTTTaGTCTCACAAGAACGTCCGTCCTTCCCCAGCTCAAAGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: WWATWSPRGLAVLQL*SHKNVRPSPAQSPL Trigger: CAGTGGGCTTTGAGCTGGGGAAGGACGGACGTTCTTGTGAGACCAAAGTTGAAGAACAGCTAACCCTCGAGGGGACCAAGTTGCCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 90 bp | CCGGGTGCAACCAGGAGAAACCCCTTAAAGGCTCTTTCTCCTGAGTaGACTGTGAGATGCTGCGTTCCAGAGCCACCCAGAACAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PGATRRNPLKALSPE*TVRCCVPEPPRTED Trigger: ATCTTCTGTTCTGGGTGGCTCTGGAACGCAGCATCTCACAGTGCACTCAGGAGAAAGAGCCTTTAAGGGGTTTCTCCTGGTTGCACCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 90 bp | AGAAACCCCTTAAAGGCTCTTTCTCCTGAGTGCACTGTGAGATGCTaGGTTCCAGAGCCACCCAGAACAGAAGATCTTTGGAGCCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RNPLKALSPECTVRC*VPEPPRTEDLWSLR Trigger: GCGGAGGCTCCAAAGATCTTCTGTTCTGGGTGGCTCTGGAACGCAGCATCTCACAGTGCACTCAGGAGAAAGAGCCTTTAAGGGGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 90 bp | TCACAGCACCTGCTGGAGTGGCTGTTACATTCCTGGTGGGCAACTTaGTCCCCTCGAGGGTTAGCTGTTCTTCAACTTTGGTCTCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SQHLLEWLLHSWWAT*SPRGLAVLQLWSHK Trigger: CTTGTGAGACCAAAGTTGAAGAACAGCTAACCCTCGAGGGGACCAAGTTGCCCACCAGGAATGTAACAGCCACTCCAGCAGGTGCTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 90 bp | AGGAGAAACCCCTTAAAGGCTCTTTCTCCTGAGTGCACTGTGAGATaGTGCGTTCCAGAGCCACCCAGAACAGAAGATCTTTGGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRNPLKALSPECTVR*CVPEPPRTEDLWSL Trigger: GAGGCTCCAAAGATCTTCTGTTCTGGGTGGCTCTGGAACGCAGCATCTCACAGTGCACTCAGGAGAAAGAGCCTTTAAGGGGTTTCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 90 bp | CTGTGTTCCCCACTGAAGAATCTCAGTGACCTGTGGCATCTCTCCTaGCTTGTCATAGACCTGACCTGGCCATGTTCTGTTTGTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCSPLKNLSDLWHLS*LVIDLTWPCSVCHS Trigger: GCTGTGACAAACAGAACATGGCCAGGTCAGGTCTATGACAAGCCAGGAGAGATGCCACAGGTCACTGAGATTCTTCAGTGGGGAACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CAA 90 bp | TTCTTTCCCCAATTGTTGGGACTGAAAAAGTCTAGGCAAGATGTGAGCATTGAGCAGAACAGAAGATCTTaGGAGCCTCCGCCAGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: FFPQLLGLKKSRQDVSIEQNRRS*EPPPGP Trigger: CGGGCCTGGCGGAGGCTCCAAAGATCTTCTGTTCTG...CTCAATGCTCACATCTTGCCTAGACTTTTTCAGTCCCAACAATTGGGGAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CAA 90 bp | GAGGTCTGGGATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGATTCCTGGTGGGCAACTaGGTCCCCTCGAGGGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: EVWDGEEIQNQLNLCSYGFLVGN*VPSRVS Trigger: GCTAACCCTCGAGGGGACCAAGTTGCCCACCAGGAA...TCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCATCCCAGACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CAA 90 bp | GAGGTCTGGGATGGGGAAGAAATTCAGAATCAACTTAATTTGTGTAGCTATGGACACTGTACAGGAACGTaGTGGCTCTTCCACCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: EVWDGEEIQNQLNLCSYGHCTGT*WLFHPR Trigger: CCGTGGGTGGAAGAGCCACAACGTTCCTGTACAGTG...TCCATAGCTACACAAATTAAGTTGATTCTGAATTTCTTCCCCATCCCAGACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CAA 90 bp | TTCGGGCCCCAGAACCACACTGTCATCTGTTACATGTTATGTGATAACTATGCACAGCCGGAAGGGAGCTaGGAAACTCAAATTAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FGPQNHTVICYMLCDNYAQPEGS*ETQIRG Trigger: GCCTCTAATTTGAGTTTCCAAGCTCCCTTCCGGCTG...TGCATAGTTATCACATAACATGTAACAGATGACAGTGTGGTTCTGGGGCCCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CAA 90 bp | TTTTGCCTGCAAAGACTCTTGCTCAGTTGTAACAACCCCCTGATGCACACACATTTGTGGAAGCAGAGTTaGAAAAGCCCCAGCACTGTA | + |
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Preference number: 5 (lower is better) Translates to: FCLQRLLLSCNNPLMHTHLWKQS*KSPSTV Trigger: TACAGTGCTGGGGCTTTTCAAACTCTGCTTCCACAA...ATGTGTGTGCATCAGGGGGTTGTTACAACTGAGCAAGAGTCTTTGCAGGCAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS-3UTR CAA 90 bp | TTCGGGCCCCAGAACCACACTGTCATCTGTTACATGTTATGTGATAACTATGCACTGGAGGAACGGCTTTaGTGGAAGCAGAGTTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: FGPQNHTVICYMLCDNYALEERL*WKQSLK Trigger: TTTCAAACTCTGCTTCCACAAAAGCCGTTCCTCCAG...TGCATAGTTATCACATAACATGTAACAGATGACAGTGTGGTTCTGGGGCCCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 72 bp | CCCGAGGCCGAACAAGCTGCGCGATCGGCCGTGGGATaGTCCCCATTCCCTGGCCGAGGCCAGAACGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PEAEQAARSAVG*SPFPGRGQNAG Trigger: TCCTGCGTTCTGGCCTCGGCCAGGGAATGGGGAGCATCCCACGGCCGATCGCGCAGCTTGTTCGGCCTCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | AAGCCCCCGAGGCCGAACAAGCTGCGCGATCGGCCGTaGGATGCTCCCCATTCCCTGGCCGAGGCCAGAACG | + |
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Preference number: 6 (lower is better) Translates to: KPPRPNKLRDRP*DAPHSLAEART Trigger: CGTTCTGGCCTCGGCCAGGGAATGGGGAGCATCCCACGGCCGATCGCGCAGCTTGTTCGGCCTCGGGGGCTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | AGCTGCGCGATCGGCCGTGGGATGCTCCCCATTCCCTaGCCGAGGCCAGAACGCAGGACAGAGGAGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SCAIGRGMLPIP*PRPERRTEEAQ Trigger: CTGTGCCTCCTCTGTCCTGCGTTCTGGCCTCGGCCAGGGAATGGGGAGCATCCCACGGCCGATCGCGCAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 72 bp | GTGAAGGCTGTAGCAAGCCCCCGAGGCCGAACAAGCTaGGCGATCGGCCGTGGGATGCTCCCCATTCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VKAVASPRGRTS*AIGRGMLPIPW Trigger: CCAGGGAATGGGGAGCATCCCACGGCCGATCGCGCAGCTTGTTCGGCCTCGGGGGCTTGCTACAGCCTTCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 72 bp | GCACAGCTTGAAACTCCGAGCCTGAGTGCACGGTGCTaGGAGTCCCGCCCCTTAGGCTGCAGGCCTCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: AQLETPSLSARC*ESRPLGCRPPP Trigger: CGGAGGAGGCCTGCAGCCTAAGGGGCGGGACTCTCAGCACCGTGCACTCAGGCTCGGAGTTTCAAGCTGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 72 bp | CAGGACACATCGCACTCACCTCTGTCCCAGGAGGGCTaGAGTCCAGCGCGGAGCTGCTCAGCCGGAAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: QDTSHSPLSQEG*SPARSCSAGRE Trigger: CTCCCTTCCGGCTGAGCAGCTCCGCGCTGGACTTCAGCCCTCCTGGGACAGAGGTGAGTGCGATGTGTCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 72 bp | GGCCCGGGACCTGCACGCAAGAGCAGGAGCACAGCTTaGAACTCCGAGCCTGAGTGCACGGTGCTGAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: GPGPARKSRSTA*NSEPECTVLRV Trigger: GACTCTCAGCACCGTGCACTCAGGCTCGGAGTTTCAAGCTGTGCTCCTGCTCTTGCGTGCAGGTCCCGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CAA 90 bp | CACTGTGAGATGCTGCGTTCCAGAGCCACCCAGAACAGAAGATCTTaGGAGCCTCCGCCAGGCCCGGGACCTGCACGCAAGAGCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: HCEMLRSRATQNRRS*EPPPGPGPARKSRS Trigger: GCTCCTGCTCTTGCGTGCAGGTCCCGGGCCTGGCGGAGGCTCCAAAGATCTTCTGTTCTGGGTGGCTCTGGAACGCAGCATCTCACAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | TGCTGCGTTCCAGAGCCACCCAGAACAGAAGATCTTTaGAGCCTCCGCCAGGCCCGGGACCTGCACGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: CCVPEPPRTEDL*SLRQARDLHAR Trigger: TCTTGCGTGCAGGTCCCGGGCCTGGCGGAGGCTCCAAAGATCTTCTGTTCTGGGTGGCTCTGGAACGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | GCATCTCCTTCCAACCAGCAGGCTCCACTCCCCTGGTaGCCTGGAGCGCAGCGCACTTTCTCACTGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: ASPSNQQAPLPW*PGAQRTFSLYR Trigger: CCTGTACAGTGAGAAAGTGCGCTGCGCTCCAGGCCACCAGGGGAGTGGAGCCTGCTGGTTGGAAGGAGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | AGCGCATCTCCTTCCAACCAGCAGGCTCCACTCCCCTaGTGGCCTGGAGCGCAGCGCACTTTCTCACTGTAC | + |
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Preference number: 6 (lower is better) Translates to: SASPSNQQAPLP*WPGAQRTFSLY Trigger: GTACAGTGAGAAAGTGCGCTGCGCTCCAGGCCACCAGGGGAGTGGAGCCTGCTGGTTGGAAGGAGATGCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 72 bp | CAGAAGATCTTTGGAGCCTCCGCCAGGCCCGGGACCTaGACGCAAGAGCAGGAGCACAGCTTGAAACTCCGA | + |
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Preference number: 6 (lower is better) Translates to: QKIFGASARPGT*TQEQEHSLKLR Trigger: TCGGAGTTTCAAGCTGTGCTCCTGCTCTTGCGTGCAGGTCCCGGGCCTGGCGGAGGCTCCAAAGATCTTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | TCCTTCCAACCAGCAGGCTCCACTCCCCTGGTGGCCTaGAGCGCAGCGCACTTTCTCACTGTACAGGAACGT | + |
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Preference number: 6 (lower is better) Translates to: SFQPAGSTPLVA*SAAHFLTVQER Trigger: ACGTTCCTGTACAGTGAGAAAGTGCGCTGCGCTCCAGGCCACCAGGGGAGTGGAGCCTGCTGGTTGGAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 72 bp | GGCGAGGTGCAGGGCACAGAACCTCAAACTGGTACTTaGATAGGTAGCCATCGGTGCGCAGATGACAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: GEVQGTEPQTGT*IGSHRCADDSA Trigger: TGCGCTGTCATCTGCGCACCGATGGCTACCTATGCAAGTACCAGTTTGAGGTTCTGTGCCCTGCACCTCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 72 bp | CCAAGTGATCTAGACAGTCAGGGAGCTCCACACACTTaGCAGCAAGGAGGTACCTCCCGGAACAGGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PSDLDSQGAPHT*QQGGTSRNRGR Trigger: TCTGCCCCTGTTCCGGGAGGTACCTCCTTGCTGGCAAGTGTGTGGAGCTCCCTGACTGTCTAGATCACTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | CGTCCCAGTGTGCGCTTGTCTCTTCCTGGATGCAGGTaGACGAAACAGAAAGGTCCCCAGGACACATCGCAC | + |
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Preference number: 6 (lower is better) Translates to: RPSVRLSLPGCR*TKQKGPQDTSH Trigger: GTGCGATGTGTCCTGGGGACCTTTCTGTTTCGTCCACCTGCATCCAGGAAGAGACAAGCGCACACTGGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 72 bp | CAAAGAGGTAGCCTCGGCATCACATTCCACACCTGGTaGGTCCAAAGCTCCCTTCCCTGTCCTGGAGGAACG | + |
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Preference number: 6 (lower is better) Translates to: QRGSLGITFHTW*VQSSLPCPGGT Trigger: CGTTCCTCCAGGACAGGGAAGGGAGCTTTGGACTCACCAGGTGTGGAATGTGATGCCGAGGCTACCTCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CAA 90 bp | CTGGTGGGCAACTTGGTCCCCTCGAGGGTTAGCTGTTCTTCAACTTaGGTCTCACAAGAACGTCCGTCCTTCCCCAGCTCAAAGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: LVGNLVPSRVSCSST*VSQERPSFPSSKPT Trigger: AGTGGGCTTTGAGCTGGGGAAGGACGGACGTTCTTGTGAGACCAAAGTTGAAGAACAGCTAACCCTCGAGGGGACCAAGTTGCCCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 72 bp | CCTTCCCCAGCTCAAAGCCCACTGCACATTCGCAGGTaGAGTCTCCCAAGTGATCTAGACAGTCAGGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: PSPAQSPLHIRR*SLPSDLDSQGA Trigger: AGCTCCCTGACTGTCTAGATCACTTGGGAGACTTCACCTGCGAATGTGCAGTGGGCTTTGAGCTGGGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 72 bp | GGTAGTGGGCTGTCCTCTGAGTCTTCTGAGTCCGGGTaGAACCAGGAGAAACCCCTTAAAGGCTCTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSGLSSESSESG*NQEKPLKGSFS Trigger: GGAGAAAGAGCCTTTAAGGGGTTTCTCCTGGTTGCACCCGGACTCAGAAGACTCAGAGGACAGCCCACTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | GAAGGGAGCTTGGAAACTCAAATTAGAGGCGGCTCCTaGGCGAGGTGCAGGGCACAGAACCTCAAACTGGTA | + |
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Preference number: 6 (lower is better) Translates to: EGSLETQIRGGS*ARCRAQNLKLV Trigger: TACCAGTTTGAGGTTCTGTGCCCTGCACCTCGCCCAGGAGCCGCCTCTAATTTGAGTTTCCAAGCTCCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | CTGGCCATGTTCTGTTTGTCACAGCACCTGCTGGAGTaGCTGTTACATTCCTGGTGGGCAACTTGGTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: LAMFCLSQHLLE*LLHSWWATWSP Trigger: AGGGGACCAAGTTGCCCACCAGGAATGTAACAGCCACTCCAGCAGGTGCTGTGACAAACAGAACATGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 72 bp | TGCAACCAGGAGAAACCCCTTAAAGGCTCTTTCTCCTaGGTGCACTGTGAGATGCTGCGTTCCAGAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: CNQEKPLKGSFS*VHCEMLRSRAT Trigger: GGTGGCTCTGGAACGCAGCATCTCACAGTGCACTCAGGAGAAAGAGCCTTTAAGGGGTTTCTCCTGGTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 72 bp | AGGGGGCGAAGATGTGTAGTTCAGGACCACGCTTCCTaGTGGTGTGCCAGTGACTTTTGGCTTGGTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: RGRRCVVQDHAS*WCASDFWLGLW Trigger: CCACAAACCAAGCCAAAAGTCACTGGCACACCATCAGGAAGCGTGGTCCTGAACTACACATCTTCGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 72 bp | ACCAGGAGAAACCCCTTAAAGGCTCTTTCTCCTGAGTaGACTGTGAGATGCTGCGTTCCAGAGCCACCCAGA | + |
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Preference number: 6 (lower is better) Translates to: TRRNPLKALSPE*TVRCCVPEPPR Trigger: TCTGGGTGGCTCTGGAACGCAGCATCTCACAGTGCACTCAGGAGAAAGAGCCTTTAAGGGGTTTCTCCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 72 bp | GAACCTCAAACTGGTACTTGCATAGGTAGCCATCGGTaGGCAGATGACAGCGCATCTCCTTCCAACCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: EPQTGTCIGSHR*ADDSASPSNQQ Trigger: CTGCTGGTTGGAAGGAGATGCGCTGTCATCTGCGCACCGATGGCTACCTATGCAAGTACCAGTTTGAGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 72 bp | GACCTGACCTGGCCATGTTCTGTTTGTCACAGCACCTaGTGGAGTGGCTGTTACATTCCTGGTGGGCAACTT | + |
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Preference number: 6 (lower is better) Translates to: DLTWPCSVCHST*WSGCYIPGGQL Trigger: AAGTTGCCCACCAGGAATGTAACAGCCACTCCAGCAGGTGCTGTGACAAACAGAACATGGCCAGGTCAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | CTGCTGGAGTGGCTGTTACATTCCTGGTGGGCAACTTaGTCCCCTCGAGGGTTAGCTGTTCTTCAACTTTGG | + |
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Preference number: 6 (lower is better) Translates to: LLEWLLHSWWAT*SPRGLAVLQLW Trigger: CCAAAGTTGAAGAACAGCTAACCCTCGAGGGGACCAAGTTGCCCACCAGGAATGTAACAGCCACTCCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | CTGACCTGGCCATGTTCTGTTTGTCACAGCACCTGCTaGAGTGGCTGTTACATTCCTGGTGGGCAACTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LTWPCSVCHSTC*SGCYIPGGQLG Trigger: ACCAAGTTGCCCACCAGGAATGTAACAGCCACTCCAGCAGGTGCTGTGACAAACAGAACATGGCCAGGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | CTGTGGCATCTCTCCTGGCTTGTCATAGACCTGACCTaGCCATGTTCTGTTTGTCACAGCACCTGCTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LWHLSWLVIDLT*PCSVCHSTCWS Trigger: ACTCCAGCAGGTGCTGTGACAAACAGAACATGGCCAGGTCAGGTCTATGACAAGCCAGGAGAGATGCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CAA 72 bp | CCTGCTGGAGTGGCTGTTACATTCCTGGTGGGCAACTaGGTCCCCTCGAGGGTTAGCTGTTCTTCAACTTTG | + |
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Preference number: 6 (lower is better) Translates to: PAGVAVTFLVGN*VPSRVSCSSTL Trigger: CAAAGTTGAAGAACAGCTAACCCTCGAGGGGACCAAGTTGCCCACCAGGAATGTAACAGCCACTCCAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CAA 72 bp | GGCCACAGTCCCACTCTTCACTCCAATGTCAGTGCATaGTGTAGAACTGTGGTGCAAAGAGGTAGCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: GHSPTLHSNVSA*CRTVVQRGSLG Trigger: GCCGAGGCTACCTCTTTGCACCACAGTTCTACACAATGCACTGACATTGGAGTGAAGAGTGGGACTGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CAA 90 bp | GTCACAGCACCTGCTGGAGTGGCTGTTACATTCCTGGTGGGCAACTaGGTCCCCTCGAGGGTTAGCTGTTCTTCAACTTTGGTCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: VTAPAGVAVTFLVGN*VPSRVSCSSTLVSQ Trigger: TTGTGAGACCAAAGTTGAAGAACAGCTAACCCTCGAGGGGACCAAGTTGCCCACCAGGAATGTAACAGCCACTCCAGCAGGTGCTGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CCA 72 bp | ACTTGGTCCCCTCGAGGGTTAGCTGTTCTTCAACTTTaGTCTCACAAGAACGTCCGTCCTTCCCCAGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: TWSPRGLAVLQL*SHKNVRPSPAQ Trigger: TTGAGCTGGGGAAGGACGGACGTTCTTGTGAGACCAAAGTTGAAGAACAGCTAACCCTCGAGGGGACCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS CAA 72 bp | AACTTGGTCCCCTCGAGGGTTAGCTGTTCTTCAACTTaGGTCTCACAAGAACGTCCGTCCTTCCCCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: NLVPSRVSCSST*VSQERPSFPSS Trigger: TGAGCTGGGGAAGGACGGACGTTCTTGTGAGACCAAAGTTGAAGAACAGCTAACCCTCGAGGGGACCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 72 bp | CCCTTAAAGGCTCTTTCTCCTGAGTGCACTGTGAGATaGTGCGTTCCAGAGCCACCCAGAACAGAAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: PLKALSPECTVR*CVPEPPRTEDL Trigger: AAGATCTTCTGTTCTGGGTGGCTCTGGAACGCAGCATCTCACAGTGCACTCAGGAGAAAGAGCCTTTAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS TCA 72 bp | GTAAAGTACTCTGTGTTCCCCACTGAAGAATCTCAGTaGCCTGTGGCATCTCTCCTGGCTTGTCATAGACCT | + |
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Preference number: 6 (lower is better) Translates to: VKYSVFPTEESQ*PVASLLACHRP Trigger: AGGTCTATGACAAGCCAGGAGAGATGCCACAGGTCACTGAGATTCTTCAGTGGGGAACACAGAGTACTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 72 bp | TTCACTCCAATGTCAGTGCATTGTGTAGAACTGTGGTaGAAAGAGGTAGCCTCGGCATCACATTCCACACCT | + |
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Preference number: 6 (lower is better) Translates to: FTPMSVHCVELW*KEVASASHSTP Trigger: AGGTGTGGAATGTGATGCCGAGGCTACCTCTTTGCACCACAGTTCTACACAATGCACTGACATTGGAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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| CDS GCA 72 bp | CAGCACTGTAATGGTCAAGACGACCAAAACGATAACTaGTATGCTCACAAGTATGAAGACCACCGTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: QHCNGQDDQNDN*YAHKYEDHRGR Trigger: TCTTCCACGGTGGTCTTCATACTTGTGAGCATAGCAGTTATCGTTTTGGTCGTCTTGACCATTACAGTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062254.4 |
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