Pregenerated sensors for CLEC12A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053063Ensembl transcript IDs: ENSMUST00000065289.6, ENSMUST00000151671.8
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR TCA 90 bp | CCCACATGGATCTCTGGTATTTTCTTCAGTCCACTTGGCCTCACTAACCAGGGTGCTACTGTGTTTGTGTaGGAGGAGACGCACACTGCC | + |
Preference number: 2 (lower is better) Translates to: PTWISGIFFSPLGLTNQGATVFV*EETHTA Trigger: GGCAGTGTGCGTCTCCTCTCACACAAACACAGTAGC...ACCCTGGTTAGTGAGGCCAAGTGGACTGAAGAAAATACCAGAGATCCATGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR-3UTR GCA 90 bp | GCTTTGATCGCTCTACTCCTGAACCCAAATGTGTGGCATCCCCTGGTGTCCCCAAGAGAAGAAATAGGCTaGATGGTCTTGTGTTCAGCG | + |
Preference number: 2 (lower is better) Translates to: ALIALLLNPNVWHPLVSPREEIG*MVLCSA Trigger: CGCTGAACACAAGACCATGCAGCCTATTTCTTCTCT...TGGGGACACCAGGGGATGCCACACATTTGGGTTCAGGAGTAGAGCGATCAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR-3UTR TCA 90 bp | TTTGATCGCTCTACTCCTGAACCCAAATGTGTGGCATCCCCTGGTGTCCCCACACAGCGCATTGTATGCTaGAAATACATGGTGAAAAGC | + |
Preference number: 2 (lower is better) Translates to: FDRSTPEPKCVASPGVPTQRIVC*KYMVKS Trigger: GCTTTTCACCATGTATTTTCAGCATACAATGCGCTG...TGTGGGGACACCAGGGGATGCCACACATTTGGGTTCAGGAGTAGAGCGATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR-3UTR TCA 90 bp | ATTTTCTTCAGTCCACTTGGCCTCACTAACCAGGGTGGGTTAGCAATAGATACTGACCAAGTATTCAAATaGGCCCTTGGGGGCCATTCT | + |
Preference number: 2 (lower is better) Translates to: IFFSPLGLTNQGGLAIDTDQVFK*ALGGHS Trigger: AGAATGGCCCCCAAGGGCTCATTTGAATACTTGGTC...AGTATCTATTGCTAACCCACCCTGGTTAGTGAGGCCAAGTGGACTGAAGAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR-3UTR GCA 90 bp | CCCACATGGATCTCTGGTATTTTCTTCAGTCCACTTGGCCTCACTAACCAGGGTAAAGTACTCATCAAATaGTTCGCTATGTCAATTGCA | + |
Preference number: 2 (lower is better) Translates to: PTWISGIFFSPLGLTNQGKVLIK*FAMSIA Trigger: TGCAATTGACATAGCGAAGCATTTGATGAGTACTTT...ACCCTGGTTAGTGAGGCCAAGTGGACTGAAGAAAATACCAGAGATCCATGTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR-3UTR CCA 90 bp | TGGGTTAGCAATAGATACTCCCATCTATTGTCCTCCCAGCTTTGGTCTAATTCTATTCAAATGAGCCCTTaGGGGCCATTCTCATTCAAA | + |
Preference number: 2 (lower is better) Translates to: WVSNRYSHLLSSQLWSNSIQMSP*GPFSFK Trigger: TTTGAATGAGAATGGCCCCCAAGGGCTCATTTGAAT...AGAATTAGACCAAAGCTGGGAGGACAATAGATGGGAGTATCTATTGCTAACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR-3UTR CCA 90 bp | AAGAGAAGAAATAGGCTGCATGGTCTTGTGTTCAGCGCATTGTATGCTGAAAATAGAACTAACTGGGAATaGCATGGGCTTTTGAAAACG | + |
Preference number: 2 (lower is better) Translates to: KRRNRLHGLVFSALYAENRTNWE*HGLLKT Trigger: CGTTTTCAAAAGCCCATGCCATTCCCAGTTAGTTCT...ATTTTCAGCATACAATGCGCTGAACACAAGACCATGCAGCCTATTTCTTCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR-3UTR CCA 90 bp | GCAATAGATACTCCCATCTATTGTCCTCCCAGCTTTGGTCTAATTCTGATCTTTAGGTTGAAATTTGCCTaGTTTATCTTTGGGGAAAAA | + |
Preference number: 2 (lower is better) Translates to: AIDTPIYCPPSFGLILIFRLKFA*FIFGEK Trigger: TTTTTCCCCAAAGATAAACCAGGCAAATTTCAACCT...AAAGATCAGAATTAGACCAAAGCTGGGAGGACAATAGATGGGAGTATCTATTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR-3UTR CAA 90 bp | GCTTTGATCGCTCTACTCCTGAACCCAAATGTGTGGCATCCCCTGGTGTCCCCAGAATGGCATGGGCTTTaGAAAACGCAAAGCCCACTC | + |
Preference number: 3 (lower is better) Translates to: ALIALLLNPNVWHPLVSPEWHGL*KTQSPL Trigger: GAGTGGGCTTTGCGTTTTCAAAAGCCCATGCCATTC...TGGGGACACCAGGGGATGCCACACATTTGGGTTCAGGAGTAGAGCGATCAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR-3UTR CAA 90 bp | GCTTTGATCGCTCTACTCCTGAACCCAAATGTGTGGCATCCCCTGGTGTCCCCAATAGGCTGCATGGTCTaGTGTTCAGCGCATTGTATG | + |
Preference number: 3 (lower is better) Translates to: ALIALLLNPNVWHPLVSPIGCMV*CSAHCM Trigger: CATACAATGCGCTGAACACAAGACCATGCAGCCTAT...TGGGGACACCAGGGGATGCCACACATTTGGGTTCAGGAGTAGAGCGATCAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR TCA 72 bp | GAAACAGTTCCACCAGCAGAGGACCAAGTATTCAAATaGGCCCTTGGGGGCCATTCTCATTCAAACCATCAC | + |
Preference number: 3 (lower is better) Translates to: ETVPPAEDQVFK*ALGGHSHSNHH Trigger: GTGATGGTTTGAATGAGAATGGCCCCCAAGGGCTCATTTGAATACTTGGTCCTCTGCTGGTGGAACTGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR-3UTR CAA 90 bp | ATTTTCTTCAGTCCACTTGGCCTCACTAACCAGGGTGGGTTAGCAATAGATACTAATTTGGCTCCTGGTTaGGGAGGGTTAGAGTCCATG | + |
Preference number: 3 (lower is better) Translates to: IFFSPLGLTNQGGLAIDTNLAPG*GGLESM Trigger: CATGGACTCTAACCCTCCCAAACCAGGAGCCAAATT...AGTATCTATTGCTAACCCACCCTGGTTAGTGAGGCCAAGTGGACTGAAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR TCA 72 bp | TGTGTGAGAGGAGACGCACACTGCCTACAGTTCTTCTaGGTGACAGATGTCTTAGCAACCTTTCAATTGCTG | + |
Preference number: 3 (lower is better) Translates to: CVRGDAHCLQFF*VTDVLATFQLL Trigger: CAGCAATTGAAAGGTTGCTAAGACATCTGTCACTCAGAAGAACTGTAGGCAGTGTGCGTCTCCTCTCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR-3UTR CAA 90 bp | GCAATAGATACTCCCATCTATTGTCCTCCCAGCTTTGGTCTAATTCTGATCTTTCTTGTGTTCAGCGCATaGTATGCTGAAAATACATGG | + |
Preference number: 3 (lower is better) Translates to: AIDTPIYCPPSFGLILIFLVFSA*YAENTW Trigger: CCATGTATTTTCAGCATACAATGCGCTGAACACAAG...AAAGATCAGAATTAGACCAAAGCTGGGAGGACAATAGATGGGAGTATCTATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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3UTR-3UTR CAA 90 bp | GCAATAGATACTCCCATCTATTGTCCTCCCAGCTTTGGTCTAATTCTGATCTTTGCTTCGCTATGTCAATaGCAAAGTTTATTTTCCCTC | + |
Preference number: 3 (lower is better) Translates to: AIDTPIYCPPSFGLILIFASLCQ*QSLFSL Trigger: GAGGGAAAATAAACTTTGCAATTGACATAGCGAAGC...AAAGATCAGAATTAGACCAAAGCTGGGAGGACAATAGATGGGAGTATCTATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR TCA 90 bp | CCCACATGGATCTCTGGTATTTTCTTCAGTCCACTTGGCCTCACTAACCAGGGTGAGCAGAGCAGGCCATaGCACTCTCTTGCCATGTTC | + |
Preference number: 4 (lower is better) Translates to: PTWISGIFFSPLGLTNQGEQSRP*HSLAMF Trigger: GAACATGGCAAGAGAGTGTCATGGCCTGCTCTGCTC...ACCCTGGTTAGTGAGGCCAAGTGGACTGAAGAAAATACCAGAGATCCATGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR GCA 90 bp | AATGAGCCCTTGGGGGCCATTCTCATTCAAACCATCACAGCAGGAGAGCAGCTATGGGTGGCTGTGCTTTaGAGCATGGCAGAAAGGTTC | + |
Preference number: 4 (lower is better) Translates to: NEPLGAILIQTITAGEQLWVAVL*SMAERF Trigger: GAACCTTTCTGCCATGCTGCAAAGCACAGCCACCCA...TAGCTGCTCTCCTGCTGTGATGGTTTGAATGAGAATGGCCCCCAAGGGCTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR CCA 90 bp | ATTTTCTTCAGTCCACTTGGCCTCACTAACCAGGGTGGGTTAGCAATAGATACTCTCGGCACAGCTGGGTaGCTGTGCTTTGCAGCATGG | + |
Preference number: 4 (lower is better) Translates to: IFFSPLGLTNQGGLAIDTLGTAG*LCFAAW Trigger: CCATGCTGCAAAGCACAGCCACCCAGCTGTGCCGAG...AGTATCTATTGCTAACCCACCCTGGTTAGTGAGGCCAAGTGGACTGAAGAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR TCA 90 bp | CCTCTAACAAGGTCACACCTTCTGGTGTCTCTGAAACAGTTCCACCAGCAGAGGAGACCCCCATTCCAATaGACAGCAGAAGGCATAGAA | + |
Preference number: 4 (lower is better) Translates to: PLTRSHLLVSLKQFHQQRRPPFQ*TAEGIE Trigger: TTCTATGCCTTCTGCTGTTCATTGGAATGGGGGTCT...CCTCTGCTGGTGGAACTGTTTCAGAGACACCAGAAGGTGTGACCTTGTTAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR CCA 90 bp | CTTGGGGGCCATTCTCATTCAAACCATCACAGCAGGAGAGCAGCTAGGGACAAGCCTGAAGTTCTTCCTTaGCCCTTTGCAATTGATTCG | + |
Preference number: 4 (lower is better) Translates to: LGGHSHSNHHSRRAARDKPEVLP*PFAIDS Trigger: CGAATCAATTGCAAAGGGCCAAGGAAGAACTTCAGG...CTTGTCCCTAGCTGCTCTCCTGCTGTGATGGTTTGAATGAGAATGGCCCCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR TCA 90 bp | CCTCTAACAAGGTCACACCTTCTGGTGTCTCTGAAACAGTTCCACCAGCAGAGGGTCCTTGTACCATTCTaGACCCTTTGGACATGGTTT | + |
Preference number: 4 (lower is better) Translates to: PLTRSHLLVSLKQFHQQRVLVPF*TLWTWF Trigger: AAACCATGTCCAAAGGGTTCAGAATGGTACAAGGAC...CCTCTGCTGGTGGAACTGTTTCAGAGACACCAGAAGGTGTGACCTTGTTAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR CCA 90 bp | ATGCAGGCAGACAAGGTCCTAAGCAGTAGCTGTGAGCTCACAGCTCAATCCACAGTGTGCGATCTTTTCTaGGCAACAATGCAAGCCAAA | + |
Preference number: 4 (lower is better) Translates to: MQADKVLSSSCELTAQSTVCDLF*ATMQAK Trigger: TTTGGCTTGCATTGTTGCCCAGAAAAGATCGCACAC...TGTGGATTGAGCTGTGAGCTCACAGCTACTGCTTAGGACCTTGTCTGCCTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR TCA 90 bp | ATGCAGGCAGACAAGGTCCTAAGCAGTAGCTGTGAGCTCACAGCTCAATCCACATTTTCTTGGAGCTGTTaGGATTGTGCTTCAGCTGTA | + |
Preference number: 4 (lower is better) Translates to: MQADKVLSSSCELTAQSTFSWSC*DCASAV Trigger: TACAGCTGAAGCACAATCTCAACAGCTCCAAGAAAA...TGTGGATTGAGCTGTGAGCTCACAGCTACTGCTTAGGACCTTGTCTGCCTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR GCA 90 bp | ATTTTCTTCAGTCCACTTGGCCTCACTAACCAGGGTGGGTTAGCAATAGATACTACAGCTGGGTGGCTGTaGTTTGCAGCATGGCAGAAA | + |
Preference number: 4 (lower is better) Translates to: IFFSPLGLTNQGGLAIDTTAGWL*FAAWQK Trigger: TTTCTGCCATGCTGCAAAGCACAGCCACCCAGCTGT...AGTATCTATTGCTAACCCACCCTGGTTAGTGAGGCCAAGTGGACTGAAGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR TCA 90 bp | CTTGGGGGCCATTCTCATTCAAACCATCACAGCAGGAGAGCAGCTAGGGACAAGATGTTCCATACTGATTaGGTTGAGAATAACAGCTGT | + |
Preference number: 4 (lower is better) Translates to: LGGHSHSNHHSRRAARDKMFHTD*VENNSC Trigger: ACAGCTGTTATTCTCAACTCAATCAGTATGGAACAT...CTTGTCCCTAGCTGCTCTCCTGCTGTGATGGTTTGAATGAGAATGGCCCCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR TCA 90 bp | CCTCTAACAAGGTCACACCTTCTGGTGTCTCTGAAACAGTTCCACCAGCAGAGGCAGGGTCCTGGATTTTaGGATTTGCATAAACAATTT | + |
Preference number: 4 (lower is better) Translates to: PLTRSHLLVSLKQFHQQRQGPGF*DLHKQF Trigger: AAATTGTTTATGCAAATCTCAAAATCCAGGACCCTG...CCTCTGCTGGTGGAACTGTTTCAGAGACACCAGAAGGTGTGACCTTGTTAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR CCA 90 bp | ACCTCCTCTAACAAGGTCACACCTTCTGGTGTCTCTGAAACAGTTCCACCAGCATTTACATTTGTGCTCTaGTTCTTTGCTATACAGCTC | + |
Preference number: 4 (lower is better) Translates to: TSSNKVTPSGVSETVPPAFTFVL*FFAIQL Trigger: GAGCTGTATAGCAAAGAACCAGAGCACAAATGTAAA...TGCTGGTGGAACTGTTTCAGAGACACCAGAAGGTGTGACCTTGTTAGAGGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR GCA 90 bp | TGGGTTAGCAATAGATACTCCCATCTATTGTCCTCCCAGCTTTGGTCTAATTCTTTTCCAACTGCACCTTaGTGGCTGTCTCTTCACATA | + |
Preference number: 4 (lower is better) Translates to: WVSNRYSHLLSSQLWSNSFPTAP*WLSLHI Trigger: TATGTGAAGAGACAGCCAGCAAGGTGCAGTTGGAAA...AGAATTAGACCAAAGCTGGGAGGACAATAGATGGGAGTATCTATTGCTAACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR TCA 90 bp | GCAATAGATACTCCCATCTATTGTCCTCCCAGCTTTGGTCTAATTCTGATCTTTAGGGAAACATTTTCCTaGAGTTCTTCCTTGGCCCTT | + |
Preference number: 4 (lower is better) Translates to: AIDTPIYCPPSFGLILIFRETFS*SSSLAL Trigger: AAGGGCCAAGGAAGAACTTCAGGAAAATGTTTCCCT...AAAGATCAGAATTAGACCAAAGCTGGGAGGACAATAGATGGGAGTATCTATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR GCA 90 bp | ATGAGACAAAGAAATCTAGACATAAACACTACAGAGAGGCAGGACTGTAGTTGTAACACACTTTCCAACTaGACCTTGCTGGCTGTCTCT | + |
Preference number: 4 (lower is better) Translates to: MRQRNLDINTTERQDCSCNTLSN*TLLAVS Trigger: AGAGACAGCCAGCAAGGTGCAGTTGGAAAGTGTGTT...ACAACTACAGTCCTGCCTCTCTGTAGTGTTTATGTCTAGATTTCTTTGTCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR GCA 90 bp | TGGGTTAGCAATAGATACTCCCATCTATTGTCCTCCCAGCTTTGGTCTAATTCTAAGTTGTATAAAAGATaGCTCCTAAGACCCCCATTC | + |
Preference number: 4 (lower is better) Translates to: WVSNRYSHLLSSQLWSNSKLYKR*LLRPPF Trigger: GAATGGGGGTCTTAGGAGGCATCTTTTATACAACTT...AGAATTAGACCAAAGCTGGGAGGACAATAGATGGGAGTATCTATTGCTAACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR TCA 90 bp | GCAATAGATACTCCCATCTATTGTCCTCCCAGCTTTGGTCTAATTCTGATCTTTCTGTCTCTTCACATATaGTATTGTTCTCATCAGTGC | + |
Preference number: 4 (lower is better) Translates to: AIDTPIYCPPSFGLILIFLSLHI*YCSHQC Trigger: GCACTGATGAGAACAATATCATATGTGAAGAGACAG...AAAGATCAGAATTAGACCAAAGCTGGGAGGACAATAGATGGGAGTATCTATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR GCA 90 bp | AGCTTTATTACGACAGGGTATAAAGTACTCATCAAATGCTTCGCTATGTCAATTTGTGCTCTGGTTCTTTaGTATACAGCTCTCGGCACA | + |
Preference number: 4 (lower is better) Translates to: SFITTGYKVLIKCFAMSICALVL*YTALGT Trigger: TGTGCCGAGAGCTGTATAGCAAAGAACCAGAGCACA...AATTGACATAGCGAAGCATTTGATGAGTACTTTATACCCTGTCGTAATAAAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR CAA 90 bp | CCTCTAACAAGGTCACACCTTCTGGTGTCTCTGAAACAGTTCCACCAGCAGAGGCTTTCCAACTGCACCTaGCTGGCTGTCTCTTCACAT | + |
Preference number: 5 (lower is better) Translates to: PLTRSHLLVSLKQFHQQRLSNCT*LAVSSH Trigger: ATGTGAAGAGACAGCCAGCAAGGTGCAGTTGGAAAG...CCTCTGCTGGTGGAACTGTTTCAGAGACACCAGAAGGTGTGACCTTGTTAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS GCA 90 bp | GGTTCTTTGCTATACAGCTCTCGGCACAGCTGGGTGGCTGTGCTTTaGAGCATGGCAGAAAGGTTCTTGATTTTCTTGGAGCTGTTGAGA | + |
Preference number: 5 (lower is better) Translates to: GSLLYSSRHSWVAVL*SMAERFLIFLELLR Trigger: TCTCAACAGCTCCAAGAAAATCAAGAACCTTTCTGCCATGCTGCAAAGCACAGCCACCCAGCTGTGCCGAGAGCTGTATAGCAAAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS-3UTR CAA 90 bp | CTTGGGGGCCATTCTCATTCAAACCATCACAGCAGGAGAGCAGCTAGGGACAAGACTTTTCCCCCACATTaGTCAGACTTCTGGGTTTCT | + |
Preference number: 5 (lower is better) Translates to: LGGHSHSNHHSRRAARDKTFPPH*SDFWVS Trigger: AGAAACCCAGAAGTCTGACAAATGTGGGGGAAAAGT...CTTGTCCCTAGCTGCTCTCCTGCTGTGATGGTTTGAATGAGAATGGCCCCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS GCA 90 bp | ATTCTGAACCCTTTGGACATGGTTTACATTTGTGCTCTGGTTCTTTaGTATACAGCTCTCGGCACAGCTGGGTGGCTGTGCTTTGCAGCA | + |
Preference number: 5 (lower is better) Translates to: ILNPLDMVYICALVL*YTALGTAGWLCFAA Trigger: TGCTGCAAAGCACAGCCACCCAGCTGTGCCGAGAGCTGTATAGCAAAGAACCAGAGCACAAATGTAAACCATGTCCAAAGGGTTCAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS GCA 90 bp | CTGTCCTTGTACCATTCTGAACCCTTTGGACATGGTTTACATTTGTaGTCTGGTTCTTTGCTATACAGCTCTCGGCACAGCTGGGTGGCT | + |
Preference number: 5 (lower is better) Translates to: LSLYHSEPFGHGLHL*SGSLLYSSRHSWVA Trigger: AGCCACCCAGCTGTGCCGAGAGCTGTATAGCAAAGAACCAGAGCACAAATGTAAACCATGTCCAAAGGGTTCAGAATGGTACAAGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS-3UTR CAA 90 bp | TTTGATCGCTCTACTCCTGAACCCAAATGTGTGGCATCCCCTGGTGTCCCCACAATTTTCTTGGAGCTGTaGAGATTGTGCTTCAGCTGT | + |
Preference number: 5 (lower is better) Translates to: FDRSTPEPKCVASPGVPTIFLEL*RLCFSC Trigger: ACAGCTGAAGCACAATCTCAACAGCTCCAAGAAAAT...TGTGGGGACACCAGGGGATGCCACACATTTGGGTTCAGGAGTAGAGCGATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR CAA 90 bp | GCTTTGATCGCTCTACTCCTGAACCCAAATGTGTGGCATCCCCTGGTGTCCCCAACCATTCTGAACCCTTaGGACATGGTTTACATTTGT | + |
Preference number: 5 (lower is better) Translates to: ALIALLLNPNVWHPLVSPTILNP*DMVYIC Trigger: ACAAATGTAAACCATGTCCAAAGGGTTCAGAATGGT...TGGGGACACCAGGGGATGCCACACATTTGGGTTCAGGAGTAGAGCGATCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS CCA 90 bp | TTACATTTGTGCTCTGGTTCTTTGCTATACAGCTCTCGGCACAGCTaGGTGGCTGTGCTTTGCAGCATGGCAGAAAGGTTCTTGATTTTC | + |
Preference number: 5 (lower is better) Translates to: LHLCSGSLLYSSRHS*VAVLCSMAERFLIF Trigger: GAAAATCAAGAACCTTTCTGCCATGCTGCAAAGCACAGCCACCCAGCTGTGCCGAGAGCTGTATAGCAAAGAACCAGAGCACAAATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS-3UTR CAA 90 bp | GAAAACGCAAAGCCCACTCTCAATGACACAACCTCCTCTAACAAGGTCACACCTGGCCATGACACTCTCTaGCCATGTTCCATACTGATT | + |
Preference number: 5 (lower is better) Translates to: ENAKPTLNDTTSSNKVTPGHDTL*PCSILI Trigger: AATCAGTATGGAACATGGCAAGAGAGTGTCATGGCC...AGGTGTGACCTTGTTAGAGGAGGTTGTGTCATTGAGAGTGGGCTTTGCGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR CAA 90 bp | CCCACATGGATCTCTGGTATTTTCTTCAGTCCACTTGGCCTCACTAACCAGGGTTCCATACTGATTGAGTaGAGAATAACAGCTGTCCTT | + |
Preference number: 5 (lower is better) Translates to: PTWISGIFFSPLGLTNQGSILIE*RITAVL Trigger: AAGGACAGCTGTTATTCTCAACTCAATCAGTATGGA...ACCCTGGTTAGTGAGGCCAAGTGGACTGAAGAAAATACCAGAGATCCATGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS GCA 90 bp | CAGACTCTTCAGAGAGGAACATCTTCTCACTTAGTGGATATTGTGTaGGATCTTTTCTGGGCAACAATGCAAGCCAAAAATAGCGTAGCT | + |
Preference number: 5 (lower is better) Translates to: QTLQRGTSSHLVDIV*DLFWATMQAKNSVA Trigger: AGCTACGCTATTTTTGGCTTGCATTGTTGCCCAGAAAAGATCGCACACAATATCCACTAAGTGAGAAGATGTTCCTCTCTGAAGAGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR CAA 90 bp | ATTTTCTTCAGTCCACTTGGCCTCACTAACCAGGGTGGGTTAGCAATAGATACTAGGTTCTTGATTTTCTaGGAGCTGTTGAGATTGTGC | + |
Preference number: 5 (lower is better) Translates to: IFFSPLGLTNQGGLAIDTRFLIF*ELLRLC Trigger: GCACAATCTCAACAGCTCCAAGAAAATCAAGAACCT...AGTATCTATTGCTAACCCACCCTGGTTAGTGAGGCCAAGTGGACTGAAGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR CAA 90 bp | TGGGTTAGCAATAGATACTCCCATCTATTGTCCTCCCAGCTTTGGTCTAATTCTATGGCAGAAAGGTTCTaGATTTTCTTGGAGCTGTTG | + |
Preference number: 5 (lower is better) Translates to: WVSNRYSHLLSSQLWSNSMAERF*IFLELL Trigger: CAACAGCTCCAAGAAAATCAAGAACCTTTCTGCCAT...AGAATTAGACCAAAGCTGGGAGGACAATAGATGGGAGTATCTATTGCTAACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS TCA 90 bp | TCCATACTGATTGAGTTGAGAATAACAGCTGTCCTTGTACCATTCTaGACCCTTTGGACATGGTTTACATTTGTGCTCTGGTTCTTTGCT | + |
Preference number: 5 (lower is better) Translates to: SILIELRITAVLVPF*TLWTWFTFVLWFFA Trigger: AGCAAAGAACCAGAGCACAAATGTAAACCATGTCCAAAGGGTTCAGAATGGTACAAGGACAGCTGTTATTCTCAACTCAATCAGTATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CCA 90 bp | GATTGTGCTTCAGCTGTAGGGAAACATTTTCCTGAAGTTCTTCCTTaGCCCTTTGCAATTGATTCGATTTTATCATTTCTGTTGCCAAAG | + |
Preference number: 5 (lower is better) Translates to: DCASAVGKHFPEVLP*PFAIDSILSFLLPK Trigger: CTTTGGCAACAGAAATGATAAAATCGAATCAATTGCAAAGGGCCAAGGAAGAACTTCAGGAAAATGTTTCCCTACAGCTGAAGCACAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS-3UTR CAA 90 bp | TGGGTTAGCAATAGATACTCCCATCTATTGTCCTCCCAGCTTTGGTCTAATTCTTTTCTGTTGCCAAAGTaGTATAAAAGATGCCTCCTA | + |
Preference number: 5 (lower is better) Translates to: WVSNRYSHLLSSQLWSNSFLLPK*YKRCLL Trigger: TAGGAGGCATCTTTTATACAACTTTGGCAACAGAAA...AGAATTAGACCAAAGCTGGGAGGACAATAGATGGGAGTATCTATTGCTAACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR CAA 90 bp | CCTTTCAATTGCTGTGACAAAAACACCTTGACCAAGGTTACTTATAAAAAGAAGTTGGAGCTGTTGAGATaGTGCTTCAGCTGTAGGGAA | + |
Preference number: 5 (lower is better) Translates to: PFNCCDKNTLTKVTYKKKLELLR*CFSCRE Trigger: TTCCCTACAGCTGAAGCACAATCTCAACAGCTCCAA...CTTCTTTTTATAAGTAACCTTGGTCAAGGTGTTTTTGTCACAGCAATTGAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS-3UTR CAA 90 bp | ATGAGACAAAGAAATCTAGACATAAACACTACAGAGAGGCAGGACTGTAGTTGTCTTGGCCCTTTGCAATaGATTCGATTTTATCATTTC | + |
Preference number: 5 (lower is better) Translates to: MRQRNLDINTTERQDCSCLGPLQ*IRFYHF Trigger: GAAATGATAAAATCGAATCAATTGCAAAGGGCCAAG...ACAACTACAGTCCTGCCTCTCTGTAGTGTTTATGTCTAGATTTCTTTGTCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS GCA 72 bp | CTATACAGCTCTCGGCACAGCTGGGTGGCTGTGCTTTaGAGCATGGCAGAAAGGTTCTTGATTTTCTTGGAG | + |
Preference number: 6 (lower is better) Translates to: LYSSRHSWVAVL*SMAERFLIFLE Trigger: CTCCAAGAAAATCAAGAACCTTTCTGCCATGCTGCAAAGCACAGCCACCCAGCTGTGCCGAGAGCTGTATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS GCA 72 bp | CCTTTGGACATGGTTTACATTTGTGCTCTGGTTCTTTaGTATACAGCTCTCGGCACAGCTGGGTGGCTGTGC | + |
Preference number: 6 (lower is better) Translates to: PLDMVYICALVL*YTALGTAGWLC Trigger: GCACAGCCACCCAGCTGTGCCGAGAGCTGTATAGCAAAGAACCAGAGCACAAATGTAAACCATGTCCAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CAA 72 bp | CCCTTTGGACATGGTTTACATTTGTGCTCTGGTTCTTaGCTATACAGCTCTCGGCACAGCTGGGTGGCTGTG | + |
Preference number: 6 (lower is better) Translates to: PFGHGLHLCSGS*LYSSRHSWVAV Trigger: CACAGCCACCCAGCTGTGCCGAGAGCTGTATAGCAAAGAACCAGAGCACAAATGTAAACCATGTCCAAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CAA 90 bp | TGGTTCTTTGCTATACAGCTCTCGGCACAGCTGGGTGGCTGTGCTTaGCAGCATGGCAGAAAGGTTCTTGATTTTCTTGGAGCTGTTGAG | + |
Preference number: 6 (lower is better) Translates to: WFFAIQLSAQLGGCA*QHGRKVLDFLGAVE Trigger: CTCAACAGCTCCAAGAAAATCAAGAACCTTTCTGCCATGCTGCAAAGCACAGCCACCCAGCTGTGCCGAGAGCTGTATAGCAAAGAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CAA 90 bp | CATTCTGAACCCTTTGGACATGGTTTACATTTGTGCTCTGGTTCTTaGCTATACAGCTCTCGGCACAGCTGGGTGGCTGTGCTTTGCAGC | + |
Preference number: 6 (lower is better) Translates to: HSEPFGHGLHLCSGS*LYSSRHSWVAVLCS Trigger: GCTGCAAAGCACAGCCACCCAGCTGTGCCGAGAGCTGTATAGCAAAGAACCAGAGCACAAATGTAAACCATGTCCAAAGGGTTCAGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CAA 90 bp | CTTCAGGAGGCTGGCATTCCGAGCAGAGCAGGCCATGACACTCTCTaGCCATGTTCCATACTGATTGAGTTGAGAATAACAGCTGTCCTT | + |
Preference number: 6 (lower is better) Translates to: LQEAGIPSRAGHDTL*PCSILIELRITAVL Trigger: AAGGACAGCTGTTATTCTCAACTCAATCAGTATGGAACATGGCAAGAGAGTGTCATGGCCTGCTCTGCTCGGAATGCCAGCCTCCTGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CAA 90 bp | CAGCTGTCCTTGTACCATTCTGAACCCTTTGGACATGGTTTACATTaGTGCTCTGGTTCTTTGCTATACAGCTCTCGGCACAGCTGGGTG | + |
Preference number: 6 (lower is better) Translates to: QLSLYHSEPFGHGLH*CSGSLLYSSRHSWV Trigger: CACCCAGCTGTGCCGAGAGCTGTATAGCAAAGAACCAGAGCACAAATGTAAACCATGTCCAAAGGGTTCAGAATGGTACAAGGACAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CAA 72 bp | TGGGTGGCTGTGCTTTGCAGCATGGCAGAAAGGTTCTaGATTTTCTTGGAGCTGTTGAGATTGTGCTTCAGC | + |
Preference number: 6 (lower is better) Translates to: WVAVLCSMAERF*IFLELLRLCFS Trigger: GCTGAAGCACAATCTCAACAGCTCCAAGAAAATCAAGAACCTTTCTGCCATGCTGCAAAGCACAGCCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CAA 72 bp | GCTGGCATTCCGAGCAGAGCAGGCCATGACACTCTCTaGCCATGTTCCATACTGATTGAGTTGAGAATAACA | + |
Preference number: 6 (lower is better) Translates to: AGIPSRAGHDTL*PCSILIELRIT Trigger: TGTTATTCTCAACTCAATCAGTATGGAACATGGCAAGAGAGTGTCATGGCCTGCTCTGCTCGGAATGCCAGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CAA 90 bp | TGGGTGGCTGTGCTTTGCAGCATGGCAGAAAGGTTCTTGATTTTCTaGGAGCTGTTGAGATTGTGCTTCAGCTGTAGGGAAACATTTTCC | + |
Preference number: 6 (lower is better) Translates to: WVAVLCSMAERFLIF*ELLRLCFSCRETFS Trigger: GGAAAATGTTTCCCTACAGCTGAAGCACAATCTCAACAGCTCCAAGAAAATCAAGAACCTTTCTGCCATGCTGCAAAGCACAGCCACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS GCA 72 bp | CTATCCTCTGGGAGGCCATTCAACACACTTTCCAACTaGACCTTGCTGGCTGTCTCTTCACATATGATATTG | + |
Preference number: 6 (lower is better) Translates to: LSSGRPFNTLSN*TLLAVSSHMIL Trigger: CAATATCATATGTGAAGAGACAGCCAGCAAGGTGCAGTTGGAAAGTGTGTTGAATGGCCTCCCAGAGGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS GCA 72 bp | TACCATTCTGAACCCTTTGGACATGGTTTACATTTGTaGTCTGGTTCTTTGCTATACAGCTCTCGGCACAGC | + |
Preference number: 6 (lower is better) Translates to: YHSEPFGHGLHL*SGSLLYSSRHS Trigger: GCTGTGCCGAGAGCTGTATAGCAAAGAACCAGAGCACAAATGTAAACCATGTCCAAAGGGTTCAGAATGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CAA 72 bp | TTGTACCATTCTGAACCCTTTGGACATGGTTTACATTaGTGCTCTGGTTCTTTGCTATACAGCTCTCGGCAC | + |
Preference number: 6 (lower is better) Translates to: LYHSEPFGHGLH*CSGSLLYSSRH Trigger: GTGCCGAGAGCTGTATAGCAAAGAACCAGAGCACAAATGTAAACCATGTCCAAAGGGTTCAGAATGGTACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CAA 72 bp | CGTAGCTTCTTGTACTTTATAAATTCCAGCACATCCTaGTTCTTAACCTTCAGGAGGCTGGCATTCCGAGCA | + |
Preference number: 6 (lower is better) Translates to: RSFLYFINSSTS*FLTFRRLAFRA Trigger: TGCTCGGAATGCCAGCCTCCTGAAGGTTAAGAACAAGGATGTGCTGGAATTTATAAAGTACAAGAAGCTACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS TCA 72 bp | ATTGAGTTGAGAATAACAGCTGTCCTTGTACCATTCTaGACCCTTTGGACATGGTTTACATTTGTGCTCTGG | + |
Preference number: 6 (lower is better) Translates to: IELRITAVLVPF*TLWTWFTFVLW Trigger: CCAGAGCACAAATGTAAACCATGTCCAAAGGGTTCAGAATGGTACAAGGACAGCTGTTATTCTCAACTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CCA 72 bp | TCTTCTCACTTAGTGGATATTGTGTGCGATCTTTTCTaGGCAACAATGCAAGCCAAAAATAGCGTAGCTTCT | + |
Preference number: 6 (lower is better) Translates to: SSHLVDIVCDLF*ATMQAKNSVAS Trigger: AGAAGCTACGCTATTTTTGGCTTGCATTGTTGCCCAGAAAAGATCGCACACAATATCCACTAAGTGAGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |
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CDS TCA 72 bp | TTGTATAAAAGATGCCTCCTAAGACCCCCATTCCAATaGACAGCAGAAGGCATAGAAGAATCAGAATCAAGA | + |
Preference number: 6 (lower is better) Translates to: LYKRCLLRPPFQ*TAEGIEESESR Trigger: TCTTGATTCTGATTCTTCTATGCCTTCTGCTGTTCATTGGAATGGGGGTCTTAGGAGGCATCTTTTATACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS CAA 72 bp | TGGCCCTTTGCAATTGATTCGATTTTATCATTTCTGTaGCCAAAGTTGTATAAAAGATGCCTCCTAAGACCC | + |
Preference number: 6 (lower is better) Translates to: WPFAIDSILSFL*PKLYKRCLLRP Trigger: GGGTCTTAGGAGGCATCTTTTATACAACTTTGGCAACAGAAATGATAAAATCGAATCAATTGCAAAGGGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065289.6 ENSMUST00000151671.8 |
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CDS TCA 72 bp | TTTCCAACTGCACCTTGCTGGCTGTCTCTTCACATATaGTATTGTTCTCATCAGTGCAGTATGTATAATAAA | + |
Preference number: 6 (lower is better) Translates to: FPTAPCWLSLHI*YCSHQCSMYNK Trigger: TTTATTATACATACTGCACTGATGAGAACAATATCATATGTGAAGAGACAGCCAGCAAGGTGCAGTTGGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065289.6 |