Pregenerated sensors for CLEC11A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004473Ensembl transcript IDs: ENSMUST00000004587.11
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCAGCCGGGATTGGCGGCAGTTCTGGCCCAAGGAGGGCTCAAGATaGAGGGTGCACTATAGAGTGCAGAGTGGAAGATGCACGGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: TSRDWRQFWPKEGSR*RVHYRVQSGRCTGW Trigger: CCACCCCGTGCATCTTCCACTCTGCACTCTATAGTGCACCCTGCATCTTGAGCCCTCCTTGGGCCAGAACTGCCGCCAATCCCGGCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR GCA 90 bp | GGGATTGGCGGCAGTTCTGGCCCAAGGAGGGCTCAAGATGCAGGGTaGACTATAGAGTGCAGAGTGGAAGATGCACGGGGTGGAGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: GIGGSSGPRRAQDAG*TIECRVEDARGGVQ Trigger: CTGAACTCCACCCCGTGCATCTTCCACTCTGCACTCTATAGTGCACCCTGCATCTTGAGCCCTCCTTGGGCCAGAACTGCCGCCAATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR GCA 90 bp | GGCTCCAGGGATCAGCTAGATTTGGGTGGAATCATTTCTTCAGACTaGCTTTGGTGCCCTATATGGAGTGAACAGACATCTGTTCACATC | + |
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Preference number: 1 (lower is better) Translates to: GSRDQLDLGGIISSD*LWCPIWSEQTSVHI Trigger: GATGTGAACAGATGTCTGTTCACTCCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATCTAGCTGATCCCTGGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR CCA 90 bp | AGGGATCAGCTAGATTTGGGTGGAATCATTTCTTCAGACTGCCTTTaGTGCCCTATATGGAGTGAACAGACATCTGTTCACATCACCTCA | + |
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Preference number: 1 (lower is better) Translates to: RDQLDLGGIISSDCL*CPIWSEQTSVHITS Trigger: TGAGGTGATGTGAACAGATGTCTGTTCACTCCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATCTAGCTGATCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR TCA 90 bp | GGGTGGAATCATTTCTTCAGACTGCCTTTGGTGCCCTATATGGAGTaGACAGACATCTGTTCACATCACCTCATAAAGTCACACATGCAT | + |
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Preference number: 1 (lower is better) Translates to: GWNHFFRLPLVPYME*TDICSHHLIKSHMH Trigger: ATGCATGTGTGACTTTATGAGGTGATGTGAACAGATGTCTGTTCACTCCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR CCA 90 bp | AAATTGTCCTATCAGAAAATAAAGCATAAAAGGTATGGGCAGGGATaGCTGTTTGGTACATGTTTGGCCACTTCCAGACTTCTGATGTTC | + |
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Preference number: 1 (lower is better) Translates to: KLSYQKIKHKRYGQG*LFGTCLATSRLLMF Trigger: GAACATCAGAAGTCTGGAAGTGGCCAAACATGTACCAAACAGCCATCCCTGCCCATACCTTTTATGCTTTATTTTCTGATAGGACAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR TCA 90 bp | CATAAAGTCACACATGCATGCAATGCTGAGGGTCAGGCTGGCCCAGGACAAGAAGTCCTAAAGGCCCCATaGGGAAGCAGGCTAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: HKVTHACNAEGQAGPGQEVLKAP*GSRLGM Trigger: CATCCCTAGCCTGCTTCCTCATGGGGCCTTTAGGAC...TTCTTGTCCTGGGCCAGCCTGACCCTCAGCATTGCATGCATGTGTGACTTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR CCA 90 bp | ACACATGCATGCAATGCTGAGGGTCAGGCTGGCCCAGGACAAGAAATTGTCCTAAAGAGGCGTGCAAAATaGGAGAGACTGCCCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: THACNAEGQAGPGQEIVLKRRAK*ERLPQL Trigger: TAGCTGGGGCAGTCTCTCCCATTTTGCACGCCTCTT...TAGGACAATTTCTTGTCCTGGGCCAGCCTGACCCTCAGCATTGCATGCATGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR GCA 90 bp | CAGCTAGATTTGGGTGGAATCATTTCTTCAGACTGCCTTTGGTGCCCTATATGGGTGCAGAGTGGAAGATaGACGGGGTGGAGTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QLDLGGIISSDCLWCPIWVQSGR*TGWSSG Trigger: CCCTGAACTCCACCCCGTGCATCTTCCACTCTGCAC...CCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATCTAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR GCA 90 bp | TTTGAGACCTTGAAGTTTCAAAGACAGGTGGGGACATGGAGAAGTCTGGGGCTGGGGTGCACTATAGAGTaGAGAGTGGAAGATGCACGG | + |
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Preference number: 2 (lower is better) Translates to: FETLKFQRQVGTWRSLGLGCTIE*RVEDAR Trigger: CCGTGCATCTTCCACTCTGCACTCTATAGTGCACCC...CAGCCCCAGACTTCTCCATGTCCCCACCTGTCTTTGAAACTTCAAGGTCTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR GCA 90 bp | CATAAAGTCACACATGCATGCAATGCTGAGGGTCAGGCTGGCCCAGGACAAGAAAAGGAGGGCTCAAGATaGAGGGTGCACTATAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: HKVTHACNAEGQAGPGQEKEGSR*RVHYRV Trigger: CACTCTATAGTGCACCCTGCATCTTGAGCCCTCCTT...TTCTTGTCCTGGGCCAGCCTGACCCTCAGCATTGCATGCATGTGTGACTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR GCA 90 bp | CATAAAGTCACACATGCATGCAATGCTGAGGGTCAGGCTGGCCCAGGACAAGAATGTAAGCAGGCTACATaGAATCTTGTGGGGTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: HKVTHACNAEGQAGPGQECKQAT*NLVGFA Trigger: GGCAAACCCCACAAGATTGCATGTAGCCTGCTTACA...TTCTTGTCCTGGGCCAGCCTGACCCTCAGCATTGCATGCATGTGTGACTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR CCA 90 bp | ACACATGCATGCAATGCTGAGGGTCAGGCTGGCCCAGGACAAGAAATTGTCCTAAGTTTCAAAGACAGGTaGGGACATGGAGAAGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: THACNAEGQAGPGQEIVLSFKDR*GHGEVW Trigger: CCAGACTTCTCCATGTCCCCACCTGTCTTTGAAACT...TAGGACAATTTCTTGTCCTGGGCCAGCCTGACCCTCAGCATTGCATGCATGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR TCA 90 bp | ACACATGCATGCAATGCTGAGGGTCAGGCTGGCCCAGGACAAGAAATTGTCCTAGCCTATTTGAGACCTTaGAGTTTCAAAGACAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: THACNAEGQAGPGQEIVLAYLRP*SFKDRW Trigger: CCACCTGTCTTTGAAACTTCAAGGTCTCAAATAGGC...TAGGACAATTTCTTGTCCTGGGCCAGCCTGACCCTCAGCATTGCATGCATGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR CAA 90 bp | CACATGCATGCAATGCTGAGGGTCAGGCTGGCCCAGGACAAGAAATaGTCCTATCAGAAAATAAAGCATAAAAGGTATGGGCAGGGATGG | + |
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Preference number: 2 (lower is better) Translates to: HMHAMLRVRLAQDKK*SYQKIKHKRYGQGW Trigger: CCATCCCTGCCCATACCTTTTATGCTTTATTTTCTGATAGGACAATTTCTTGTCCTGGGCCAGCCTGACCCTCAGCATTGCATGCATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR CAA 90 bp | ATAAAGCATAAAAGGTATGGGCAGGGATGGCTGTTTGGTACATGTTaGGCCACTTCCAGACTTCTGATGTTCATGTTACAAGGCCGCACC | + |
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Preference number: 2 (lower is better) Translates to: IKHKRYGQGWLFGTC*ATSRLLMFMLQGRT Trigger: GGTGCGGCCTTGTAACATGAACATCAGAAGTCTGGAAGTGGCCAAACATGTACCAAACAGCCATCCCTGCCCATACCTTTTATGCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR TCA 90 bp | AGTTCAGAAAGTTACAAATTCACAAGGCCCTTCCCCCAGGTCATCCAATCAGTATCCTCGCTTTGTGTGTaGCCTCACATACTAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SSESYKFTRPFPQVIQSVSSLCV*PHILRR Trigger: CCTCCTTAGTATGTGAGGTCACACACAAAGCGAGGA...TACTGATTGGATGACCTGGGGGAAGGGCCTTGTGAATTTGTAACTTTCTGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR GCA 90 bp | CAGCTAGATTTGGGTGGAATCATTTCTTCAGACTGCCTTTGGTGCCCTATATGGTACTCCAGACATCTGTaGACAAGTGTGCACAACCAC | + |
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Preference number: 2 (lower is better) Translates to: QLDLGGIISSDCLWCPIWYSRHL*TSVHNH Trigger: GTGGTTGTGCACACTTGTGCACAGATGTCTGGAGTA...CCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATCTAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR GCA 90 bp | AGTTCAGAAAGTTACAAATTCACAAGGCCCTTCCCCCAGGTCATCCAATCAGTAAAAGTCACACATGCATaGAATGCTGAGGGTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSESYKFTRPFPQVIQSVKVTHA*NAEGQA Trigger: AGCCTGACCCTCAGCATTGCATGCATGTGTGACTTT...TACTGATTGGATGACCTGGGGGAAGGGCCTTGTGAATTTGTAACTTTCTGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR GCA 90 bp | CATAAAGTCACACATGCATGCAATGCTGAGGGTCAGGCTGGCCCAGGACAAGAATATGTTAAATTTTTATaGTCCGGCCTACATGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: HKVTHACNAEGQAGPGQEYVKFL*SGLHVS Trigger: GCTTACATGTAGGCCGGAGCATAAAAATTTAACATA...TTCTTGTCCTGGGCCAGCCTGACCCTCAGCATTGCATGCATGTGTGACTTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR GCA 90 bp | CATAAAGTCACACATGCATGCAATGCTGAGGGTCAGGCTGGCCCAGGACAAGAATGGCCTTGTAAAATTTaGTGTCCTAGCAAATTTAGT | + |
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Preference number: 2 (lower is better) Translates to: HKVTHACNAEGQAGPGQEWPCKI*CPSKFS Trigger: ACTAAATTTGCTAGGACAGCAAATTTTACAAGGCCA...TTCTTGTCCTGGGCCAGCCTGACCCTCAGCATTGCATGCATGTGTGACTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR CCA 90 bp | GATTTGGGTGGAATCATTTCTTCAGACTGCCTTTGGTGCCCTATATGGAGTGAAGCTGATAATGCATCTTaGAAGCAATCTCAGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: DLGGIISSDCLWCPIWSEADNAS*KQSQEH Trigger: GTGCTCCTGAGATTGCTTCCAAGATGCATTATCAGC...TTCACTCCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR GCA 90 bp | TCCATCTACTTCCTCATTCTCCCAGATATTGAAGACTATTCTGAAATTGATTGGGTACGGTGCAAAATGTaGACTAGAGCTCCTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SIYFLILPDIEDYSEIDWVRCKM*TRAPGQ Trigger: CTGCCCAGGAGCTCTAGTGCACATTTTGCACCGTAC...CCAATCAATTTCAGAATAGTCTTCAATATCTGGGAGAATGAGGAAGTAGATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR GCA 90 bp | AGTTCAGAAAGTTACAAATTCACAAGGCCCTTCCCCCAGGTCATCCAATCAGTAATCATTTCTTCAGACTaGCTTTGGTGCCCTATATGG | + |
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Preference number: 2 (lower is better) Translates to: SSESYKFTRPFPQVIQSVIISSD*LWCPIW Trigger: CCATATAGGGCACCAAAGGCAGTCTGAAGAAATGAT...TACTGATTGGATGACCTGGGGGAAGGGCCTTGTGAATTTGTAACTTTCTGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR TCA 90 bp | CAGCTAGATTTGGGTGGAATCATTTCTTCAGACTGCCTTTGGTGCCCTATATGGTGCACATGTGCTCTATaGCATTCTGTACTTCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: QLDLGGIISSDCLWCPIWCTCAL*HSVLQK Trigger: TTTTTGAAGTACAGAATGTCATAGAGCACATGTGCA...CCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATCTAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR CCA 90 bp | GATTTGGGTGGAATCATTTCTTCAGACTGCCTTTGGTGCCCTATATGGAGTGAACTACATGCAATCTTGTaGGGTTTGCCTTTAAAATCC | + |
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Preference number: 2 (lower is better) Translates to: DLGGIISSDCLWCPIWSELHAIL*GLPLKS Trigger: GGATTTTAAAGGCAAACCCCACAAGATTGCATGTAG...TTCACTCCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR TCA 90 bp | CTGGGAAAACAGTTTCCGAGGCACAAGTCAACAGAAAAGAAGATTAAATGTCAGACCTATATAGGTGCATaGATACTCCAGACATCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LGKQFPRHKSTEKKIKCQTYIGA*ILQTSV Trigger: CACAGATGTCTGGAGTATTCATGCACCTATATAGGT...CTGACATTTAATCTTCTTTTCTGTTGACTTGTGCCTCGGAAACTGTTTTCCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR TCA 90 bp | AGTTCAGAAAGTTACAAATTCACAAGGCCCTTCCCCCAGGTCATCCAATCAGTAATACTAAGGAGGTTGTaGGACTTAAAAGTTGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: SSESYKFTRPFPQVIQSVILRRL*DLKVVV Trigger: TACCACAACTTTTAAGTCTCACAACCTCCTTAGTAT...TACTGATTGGATGACCTGGGGGAAGGGCCTTGTGAATTTGTAACTTTCTGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR TCA 90 bp | GCACATGTGCTCTATGACATTCTGTACTTCAAAAACACAATTACCCAAAGTCAGGGTCAGATGTCTCCATaGCCCCTCAAATTATATTTT | + |
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Preference number: 2 (lower is better) Translates to: AHVLYDILYFKNTITQSQGQMSP*PLKLYF Trigger: AAAATATAATTTGAGGGGTCATGGAGACATCTGACC...CTGACTTTGGGTAATTGTGTTTTTGAAGTACAGAATGTCATAGAGCACATGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR CAA 90 bp | CCATCTACTTCCTCATTCTCCCAGATATTGAAGACTATTCTGAAATaGATTGGCCTTGTAAAATTTGCTGTCCTAGCAAATTTAGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: PSTSSFSQILKTILK*IGLVKFAVLANLVV Trigger: TACAACTAAATTTGCTAGGACAGCAAATTTTACAAGGCCAATCAATTTCAGAATAGTCTTCAATATCTGGGAGAATGAGGAAGTAGATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR CCA 72 bp | CATGGAGAAGTCTGGGGCTGGGGGACCAGCCGGGATTaGCGGCAGTTCTGGCCCAAGGAGGGCTCAAGATGC | + |
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Preference number: 3 (lower is better) Translates to: HGEVWGWGTSRD*RQFWPKEGSRC Trigger: GCATCTTGAGCCCTCCTTGGGCCAGAACTGCCGCCAATCCCGGCTGGTCCCCCAGCCCCAGACTTCTCCATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR GCA 72 bp | GGCAGTTCTGGCCCAAGGAGGGCTCAAGATGCAGGGTaGACTATAGAGTGCAGAGTGGAAGATGCACGGGGT | + |
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Preference number: 3 (lower is better) Translates to: GSSGPRRAQDAG*TIECRVEDARG Trigger: ACCCCGTGCATCTTCCACTCTGCACTCTATAGTGCACCCTGCATCTTGAGCCCTCCTTGGGCCAGAACTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR CAA 90 bp | GACATCTGTTCACATCACCTCATAAAGTCACACATGCATGCAATGCTGAGGGTCACGAAAGCCCCTAGCTaGTGTGGGCTGTACACTAAC | + |
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Preference number: 3 (lower is better) Translates to: DICSHHLIKSHMHAMLRVTKAPS*CGLYTN Trigger: GTTAGTGTACAGCCCACACAAGCTAGGGGCTTTCGT...GACCCTCAGCATTGCATGCATGTGTGACTTTATGAGGTGATGTGAACAGATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR TCA 72 bp | ATTAGACTAGGAGACCTGGGCTCAGAGAGGAAAGACTaGCTTGGCTTCTCAGGCAGGAAAATAACTGAGCGA | + |
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Preference number: 3 (lower is better) Translates to: IRLGDLGSERKD*LGFSGRKITER Trigger: TCGCTCAGTTATTTTCCTGCCTGAGAAGCCAAGTCAGTCTTTCCTCTCTGAGCCCAGGTCTCCTAGTCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR CAA 90 bp | CTGGGAAAACAGTTTCCGAGGCACAAGTCAACAGAAAAGAAGATTAAATGTCAGCACCTTCGCGATTCCTaGGTCTCTGCTCAGGACCAA | + |
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Preference number: 3 (lower is better) Translates to: LGKQFPRHKSTEKKIKCQHLRDS*VSAQDQ Trigger: TTGGTCCTGAGCAGAGACCAAGGAATCGCGAAGGTG...CTGACATTTAATCTTCTTTTCTGTTGACTTGTGCCTCGGAAACTGTTTTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR GCA 72 bp | AGGTGCATGAATACTCCAGACATCTGTGCACAAGTGTaGACAACCACATGTACGTTCCTATGCACATGTGCT | + |
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Preference number: 3 (lower is better) Translates to: RCMNTPDICAQV*TTTCTFLCTCA Trigger: AGCACATGTGCATAGGAACGTACATGTGGTTGTGCACACTTGTGCACAGATGTCTGGAGTATTCATGCACCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR CCA 72 bp | GATAATGCATCTTGGAAGCAATCTCAGGAGCACACCTaGCCCCAATCAGTCTGGGTGCCAGTATCTAAAATA | + |
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Preference number: 3 (lower is better) Translates to: DNASWKQSQEHT*PQSVWVPVSKI Trigger: TATTTTAGATACTGGCACCCAGACTGATTGGGGCCAGGTGTGCTCCTGAGATTGCTTCCAAGATGCATTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR CAA 90 bp | GATTTGGGTGGAATCATTTCTTCAGACTGCCTTTGGTGCCCTATATGGAGTGAACTGTTTGGTACATGTTaGGCCACTTCCAGACTTCTG | + |
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Preference number: 3 (lower is better) Translates to: DLGGIISSDCLWCPIWSELFGTC*ATSRLL Trigger: CAGAAGTCTGGAAGTGGCCAAACATGTACCAAACAG...TTCACTCCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR TCA 72 bp | AAGCAGGCTAGGGATGTTGACACCTATATAGGTGCATaGATACTCCAGACATCTGTGCACAAGTGTGCACAA | + |
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Preference number: 3 (lower is better) Translates to: KQARDVDTYIGA*ILQTSVHKCAQ Trigger: TTGTGCACACTTGTGCACAGATGTCTGGAGTATTCATGCACCTATATAGGTGTCAACATCCCTAGCCTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR-3UTR CAA 90 bp | CTGGGAAAACAGTTTCCGAGGCACAAGTCAACAGAAAAGAAGATTAAATGTCAGGCAATCTTGTGGGGTTaGCCTTTAAAATCCCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: LGKQFPRHKSTEKKIKCQAILWG*PLKSLG Trigger: GCCCAGGGATTTTAAAGGCAAACCCCACAAGATTGC...CTGACATTTAATCTTCTTTTCTGTTGACTTGTGCCTCGGAAACTGTTTTCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR TCA 72 bp | AAAAGGATTTATTGGCACTGGGCCTATTTGAGACCTTaGAGTTTCAAAGACAGGTGGGGACATGGAGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: KRIYWHWAYLRP*SFKDRWGHGEV Trigger: GACTTCTCCATGTCCCCACCTGTCTTTGAAACTTCAAGGTCTCAAATAGGCCCAGTGCCAATAAATCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR GCA 72 bp | GATTTGGGTGGAATCATTTCTTCAGACTGCCTTTGGTaGCCTATATGGAGTGAACAGACATCTGTTCACATC | + |
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Preference number: 3 (lower is better) Translates to: DLGGIISSDCLW*PIWSEQTSVHI Trigger: GATGTGAACAGATGTCTGTTCACTCCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR GCA 72 bp | GATCAGCTAGATTTGGGTGGAATCATTTCTTCAGACTaGCTTTGGTGCCCTATATGGAGTGAACAGACATCT | + |
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Preference number: 3 (lower is better) Translates to: DQLDLGGIISSD*LWCPIWSEQTS Trigger: AGATGTCTGTTCACTCCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATCTAGCTGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR CCA 72 bp | CTAGATTTGGGTGGAATCATTTCTTCAGACTGCCTTTaGTGCCCTATATGGAGTGAACAGACATCTGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: LDLGGIISSDCL*CPIWSEQTSVH Trigger: GTGAACAGATGTCTGTTCACTCCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR TCA 72 bp | CATTTCTTCAGACTGCCTTTGGTGCCCTATATGGAGTaGACAGACATCTGTTCACATCACCTCATAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: HFFRLPLVPYME*TDICSHHLIKS Trigger: TGACTTTATGAGGTGATGTGAACAGATGTCTGTTCACTCCATATAGGGCACCAAAGGCAGTCTGAAGAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR CCA 72 bp | TATCAGAAAATAAAGCATAAAAGGTATGGGCAGGGATaGCTGTTTGGTACATGTTTGGCCACTTCCAGACTT | + |
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Preference number: 3 (lower is better) Translates to: YQKIKHKRYGQG*LFGTCLATSRL Trigger: AAGTCTGGAAGTGGCCAAACATGTACCAAACAGCCATCCCTGCCCATACCTTTTATGCTTTATTTTCTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| 3UTR TCA 72 bp | ACAACCACATGTACGTTCCTATGCACATGTGCTCTATaGCATTCTGTACTTCAAAAACACAATTACCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TTTCTFLCTCAL*HSVLQKHNYPK Trigger: CTTTGGGTAATTGTGTTTTTGAAGTACAGAATGTCATAGAGCACATGTGCATAGGAACGTACATGTGGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| 3UTR GCA 72 bp | CTAGGACAACTTCAAGACATATATGTTAAATTTTTATaGTCCGGCCTACATGTAAGCAGGCTACATGCAATC | + |
|
Preference number: 3 (lower is better) Translates to: LGQLQDIYVKFL*SGLHVSRLHAI Trigger: GATTGCATGTAGCCTGCTTACATGTAGGCCGGAGCATAAAAATTTAACATATATGTCTTGAAGTTGTCCTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| 3UTR CAA 72 bp | ACATGGAGAAGTCTGGGGCTGGGGGACCAGCCGGGATaGGCGGCAGTTCTGGCCCAAGGAGGGCTCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TWRSLGLGDQPG*AAVLAQGGLKM Trigger: CATCTTGAGCCCTCCTTGGGCCAGAACTGCCGCCAATCCCGGCTGGTCCCCCAGCCCCAGACTTCTCCATGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR GCA 90 bp | GGCTCAGGTCCTAAAGGCCCCATGAGGAAGCAGGCTAGGGATGTTGACACCTATACCTCCTTCAGGGCTTaGACTGAGTCGCGGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSGPKGPMRKQARDVDTYTSFRA*TESRVS Trigger: TGACACCCGCGACTCAGTGCAAGCCCTGAAGGAGGT...ATAGGTGTCAACATCCCTAGCCTGCTTCCTCATGGGGCCTTTAGGACCTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGATTTGGGTGGAATCATTTCTTCAGACTGCCTTTGGTGCCCTATATGGGCCTGCGCCGCCGCCTaGGTCTCGAAGTCTCGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLDLGGIISSDCLWCPIWACAAA*VSKSRE Trigger: CTCGCGAGACTTCGAGACCCAGGCGGCGGCGCAGGC...CCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATCTAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGAAAGTTACAAATTCACAAGGCCCTTCCCCCAGGTCATCCAATCAGTATCGGAGCGCCGATCGTaGACTCCCAGCCACACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSESYKFTRPFPQVIQSVSERRS*TPSHTG Trigger: GCCGGTGTGGCTGGGAGTGCACGATCGGCGCTCCGA...TACTGATTGGATGACCTGGGGGAAGGGCCTTGTGAATTTGTAACTTTCTGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR TCA 90 bp | ACACATGCATGCAATGCTGAGGGTCAGGCTGGCCCAGGACAAGAAATTGTCCTATCCTCTTCTTCCCCTTaGGTCTCTGTGGTCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: THACNAEGQAGPGQEIVLSSSSP*VSVVSQ Trigger: CTGGGAGACCACAGAGACTCAAGGGGAAGAAGAGGA...TAGGACAATTTCTTGTCCTGGGCCAGCCTGACCCTCAGCATTGCATGCATGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR CCA 90 bp | GATTTGGGTGGAATCATTTCTTCAGACTGCCTTTGGTGCCCTATATGGAGTGAACCGTCGTCTGAGGCCTaGGCCACGCAGTTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLGGIISSDCLWCPIWSEPSSEA*ATQFSR Trigger: CCTGGAGAACTGCGTGGCCCAGGCCTCAGACGACGG...TTCACTCCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR GCA 90 bp | TTTGAGACCTTGAAGTTTCAAAGACAGGTGGGGACATGGAGAAGTCTGGGGCTGACGTGCAGACGGACGTaGAATTGGTGTAGGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FETLKFQRQVGTWRSLGLTCRRT*NWCRPA Trigger: TGCAGGCCTACACCAATTGCACGTCCGTCTGCACGT...CAGCCCCAGACTTCTCCATGTCCCCACCTGTCTTTGAAACTTCAAGGTCTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR CCA 90 bp | CATAAAGTCACACATGCATGCAATGCTGAGGGTCAGGCTGGCCCAGGACAAGAAAGCCCTAGGGCCTCCTaGAGATTCTTCAACATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HKVTHACNAEGQAGPGQESPRAS*RFFNIC Trigger: ACAGATGTTGAAGAATCTCCAGGAGGCCCTAGGGCT...TTCTTGTCCTGGGCCAGCCTGACCCTCAGCATTGCATGCATGTGTGACTTTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR CCA 90 bp | TTTAAAATCCCTGGGCTGATAATGCATCTTGGAAGCAATCTCAGGAGCACACCTCAGTGTCCTCTGGTGTaGGAGAAGGGCTGGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FKIPGLIMHLGSNLRSTPQCPLV*EKGWGK Trigger: CTTTCCCCAGCCCTTCTCCCACACCAGAGGACACTG...AGGTGTGCTCCTGAGATTGCTTCCAAGATGCATTATCAGCCCAGGGATTTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGATTTGGGTGGAATCATTTCTTCAGACTGCCTTTGGTGCCCTATATGGCCCCTTGAGTCTCTGTaGTCTCCCAGACCTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLDLGGIISSDCLWCPIWPLESL*SPRPLC Trigger: ACAAAGAGGTCTGGGAGACCACAGAGACTCAAGGGG...CCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATCTAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| 3UTR CAA 72 bp | CCAAAGCAAAATATGCCTCAGACGAAAGCCCCTAGCTaGTGTGGGCTGTACACTAACAGTCCATCTACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKQNMPQTKAPS*CGLYTNSPSTS Trigger: GGAAGTAGATGGACTGTTAGTGTACAGCCCACACAAGCTAGGGGCTTTCGTCTGAGGCATATTTTGCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR TCA 90 bp | TCCATCTACTTCCTCATTCTCCCAGATATTGAAGACTATTCTGAAATTGATTGGCCAAGAACCGTCGTCTaGGGCCTGGGCCACGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SIYFLILPDIEDYSEIDWPRTVV*GLGHAV Trigger: AACTGCGTGGCCCAGGCCTCAGACGACGGTTCTTGG...CCAATCAATTTCAGAATAGTCTTCAATATCTGGGAGAATGAGGAAGTAGATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR CCA 90 bp | AAGAAATTGTCCTATCAGAAAATAAAGCATAAAAGGTATGGGCAGGGATGGCTGAGCAGGAAGCACTTGTaGCCAAGGCGCAGGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KKLSYQKIKHKRYGQGWLSRKHL*PRRRPF Trigger: GAAGGGCCTGCGCCTTGGCCACAAGTGCTTCCTGCT...CAGCCATCCCTGCCCATACCTTTTATGCTTTATTTTCTGATAGGACAATTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR TCA 90 bp | AAGAAATTGTCCTATCAGAAAATAAAGCATAAAAGGTATGGGCAGGGATGGCTGGGCCCAAGATGTAAGTaGCAGTGTCCTCTGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKLSYQKIKHKRYGQGWLGPRCK*QCPLVW Trigger: CCACACCAGAGGACACTGTCACTTACATCTTGGGCC...CAGCCATCCCTGCCCATACCTTTTATGCTTTATTTTCTGATAGGACAATTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR CCA 90 bp | AACCACATGTACGTTCCTATGCACATGTGCTCTATGACATTCTGTACTTCAAAAAGACGGACGTGCAATTaGTGTAGGCCTGCATCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NHMYVPMHMCSMTFCTSKRRTCN*CRPASR Trigger: CCTCGATGCAGGCCTACACCAATTGCACGTCCGTCT...TTTTGAAGTACAGAATGTCATAGAGCACATGTGCATAGGAACGTACATGTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR TCA 90 bp | CTGGGAAAACAGTTTCCGAGGCACAAGTCAACAGAAAAGAAGATTAAATGTCAGATTCTTCAACATCTGTaGCTCCCGCTCTCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKQFPRHKSTEKKIKCQILQHL*LPLSLL Trigger: GAGGAGAGAGAGCGGGAGTCACAGATGTTGAAGAAT...CTGACATTTAATCTTCTTTTCTGTTGACTTGTGCCTCGGAAACTGTTTTCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR GCA 90 bp | TCCATCTACTTCCTCATTCTCCCAGATATTGAAGACTATTCTGAAATTGATTGGCGGGTGTCCAAAACGTaGAGACGGACGTGCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIYFLILPDIEDYSEIDWRVSKT*RRTCNW Trigger: CCAATTGCACGTCCGTCTGCACGTTTTGGACACCCG...CCAATCAATTTCAGAATAGTCTTCAATATCTGGGAGAATGAGGAAGTAGATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR CCA 90 bp | CTAGGACAACTTCAAGACATATATGTTAAATTTTTATGCTCCGGCCTACATGTAAGTGACAGTGTCCTCTaGTGTGGGAGAAGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGQLQDIYVKFLCSGLHVSDSVL*CGRRAG Trigger: CCCAGCCCTTCTCCCACACCAGAGGACACTGTCACT...TACATGTAGGCCGGAGCATAAAAATTTAACATATATGTCTTGAAGTTGTCCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| 3UTR CAA 72 bp | AAAAGGTATGGGCAGGGATGGCTGTTTGGTACATGTTaGGCCACTTCCAGACTTCTGATGTTCATGTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: KRYGQGWLFGTC*ATSRLLMFMLQ Trigger: TTGTAACATGAACATCAGAAGTCTGGAAGTGGCCAAACATGTACCAAACAGCCATCCCTGCCCATACCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| 3UTR CAA 72 bp | GATGCACGGGGTGGAGTTCAGGGTGCGGAATGCACATaGTACGTATGGTGGTTAATATTACATTTAAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DARGGVQGAECT*YVWWLILHLKV Trigger: AACTTTTAAATGTAATATTAACCACCATACGTACAATGTGCATTCCGCACCCTGAACTCCACCCCGTGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR TCA 90 bp | AAGAAATTGTCCTATCAGAAAATAAAGCATAAAAGGTATGGGCAGGGATGGCTGAAGAAGGTGCTGTGGTaGTTTCCTCTTCCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKLSYQKIKHKRYGQGWLKKVLW*FPLPLL Trigger: AAGAAGAGGAAGAGGAAATCACCACAGCACCTTCTT...CAGCCATCCCTGCCCATACCTTTTATGCTTTATTTTCTGATAGGACAATTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS GCA 90 bp | TCCGCAGGCTGTGCTAAGCTCCCACCTCGCGCCTTGCACCGCGCCTaGGCCGCCGCCTGGGTCTCGAAGTCTCGCGAGAGCAGGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SAGCAKLPPRALHRA*AAAWVSKSRESRKH Trigger: GTGCTTCCTGCTCTCGCGAGACTTCGAGACCCAGGCGGCGGCGCAGGCGCGGTGCAAGGCGCGAGGTGGGAGCTTAGCACAGCCTGCGGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS CCA 90 bp | GCCGCCGCCTGGGTCTCGAAGTCTCGCGAGAGCAGGAAGCACTTGTaGCCAAGGCGCAGGCCCTTCAGGCAGCCCTCCAAGCGGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AAAWVSKSRESRKHL*PRRRPFRQPSKRPC Trigger: GCACGGCCGCTTGGAGGGCTGCCTGAAGGGCCTGCGCCTTGGCCACAAGTGCTTCCTGCTCTCGCGAGACTTCGAGACCCAGGCGGCGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS GCA 90 bp | CGGCCGTGCTCCTGCTCAGCACGGTCCTGGACCTCCTTCAGGGCTTaGACTGAGTCGCGGGTGTCACTCGCAGCATCCCGCAGCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPCSCSARSWTSFRA*TESRVSLAASRSCR Trigger: GCGGCAGCTGCGGGATGCTGCGAGTGACACCCGCGACTCAGTGCAAGCCCTGAAGGAGGTCCAGGACCGTGCTGAGCAGGAGCACGGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS CCA 90 bp | GCTAAGCTCCCACCTCGCGCCTTGCACCGCGCCTGCGCCGCCGCCTaGGTCTCGAAGTCTCGCGAGAGCAGGAAGCACTTGTGGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AKLPPRALHRACAAA*VSKSRESRKHLWPR Trigger: CCTTGGCCACAAGTGCTTCCTGCTCTCGCGAGACTTCGAGACCCAGGCGGCGGCGCAGGCGCGGTGCAAGGCGCGAGGTGGGAGCTTAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS TCA 90 bp | GTGCTCCTGCTCAGCACGGTCCTGGACCTCCTTCAGGGCTTGCACTaGGTCGCGGGTGTCACTCGCAGCATCCCGCAGCTGCCGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLLLSTVLDLLQGLH*VAGVTRSIPQLPQP Trigger: GGGCTGCGGCAGCTGCGGGATGCTGCGAGTGACACCCGCGACTCAGTGCAAGCCCTGAAGGAGGTCCAGGACCGTGCTGAGCAGGAGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS TCA 90 bp | TCTGAGGCCTGGGCCACGCAGTTCTCCAGGACGCCGCCATTGGGCTaGTCCGGGCTGAGTGGATGTGTTGCCGCACTAGGCTGGGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SEAWATQFSRTPPLG*SGLSGCVAALGWAP Trigger: CGGCGCCCAGCCTAGTGCGGCAACACATCCACTCAGCCCGGATCAGCCCAATGGCGGCGTCCTGGAGAACTGCGTGGCCCAGGCCTCAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS GCA 90 bp | CCAAGGCGCAGGCCCTTCAGGCAGCCCTCCAAGCGGCCGTGCTCCTaGTCAGCACGGTCCTGGACCTCCTTCAGGGCTTGCACTGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PRRRPFRQPSKRPCS*SARSWTSFRACTES Trigger: CGACTCAGTGCAAGCCCTGAAGGAGGTCCAGGACCGTGCTGAGCAGGAGCACGGCCGCTTGGAGGGCTGCCTGAAGGGCCTGCGCCTTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS CCA 90 bp | GAGTCGCGGGTGTCACTCGCAGCATCCCGCAGCTGCCGCAGCCCCTaGGTCAGCTCAACCACACGGGTGTCCAAAACGTGCAGACGGACG | + |
|
Preference number: 5 (lower is better) Translates to: ESRVSLAASRSCRSP*VSSTTRVSKTCRRT Trigger: CGTCCGTCTGCACGTTTTGGACACCCGTGTGGTTGAGCTGACCCAGGGGCTGCGGCAGCTGCGGGATGCTGCGAGTGACACCCGCGACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS TCA 90 bp | GTAGAGGCGCCGCTCACAGTCATGGTCCCACCAAGAACCGTCGTCTaGGGCCTGGGCCACGCAGTTCTCCAGGACGCCGCCATTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VEAPLTVMVPPRTVV*GLGHAVLQDAAIGL Trigger: CAGCCCAATGGCGGCGTCCTGGAGAACTGCGTGGCCCAGGCCTCAGACGACGGTTCTTGGTGGGACCATGACTGTGAGCGGCGCCTCTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS GCA 90 bp | TGGATGTGTTGCCGCACTAGGCTGGGCGCCGGACTCCAGGCTGAATaGGCGGTGCCAGGCGAAGAAAGACACGCGCTGGCCGTTCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: WMCCRTRLGAGLQAE*AVPGEERHALAVLE Trigger: TTCGAGAACGGCCAGCGCGTGTCTTTCTTCGCCTGGCACCGCGCATTCAGCCTGGAGTCCGGCGCCCAGCCTAGTGCGGCAACACATCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS GCA 90 bp | TGCCGCAGCCCCTGGGTCAGCTCAACCACACGGGTGTCCAAAACGTaGAGACGGACGTGCAATTGGTGTAGGCCTGCATCGAGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CRSPWVSSTTRVSKT*RRTCNWCRPASRLA Trigger: GGCCAGCCTCGATGCAGGCCTACACCAATTGCACGTCCGTCTGCACGTTTTGGACACCCGTGTGGTTGAGCTGACCCAGGGGCTGCGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS TCA 90 bp | GGTGTAGGCCTGCATCGAGGCTGGCCAAGCGGCCCAAGATGTAAGTaGCAGTGTCCTCTGGTGTGGGAGAAGGGCTGGGGAAAGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GVGLHRGWPSGPRCK*QCPLVWEKGWGKGW Trigger: CCAACCCTTTCCCCAGCCCTTCTCCCACACCAGAGGACACTGTCACTTACATCTTGGGCCGCTTGGCCAGCCTCGATGCAGGCCTACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS GCA 90 bp | TGGGTCAGCTCAACCACACGGGTGTCCAAAACGTGCAGACGGACGTaGAATTGGTGTAGGCCTGCATCGAGGCTGGCCAAGCGGCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: WVSSTTRVSKTCRRT*NWCRPASRLAKRPK Trigger: CTTGGGCCGCTTGGCCAGCCTCGATGCAGGCCTACACCAATTGCACGTCCGTCTGCACGTTTTGGACACCCGTGTGGTTGAGCTGACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS CCA 90 bp | ATCGAGGCTGGCCAAGCGGCCCAAGATGTAAGTGACAGTGTCCTCTaGTGTGGGAGAAGGGCTGGGGAAAGGGTTGGGACTAGAAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: IEAGQAAQDVSDSVL*CGRRAGERVGTRRR Trigger: CCTTCTTCTAGTCCCAACCCTTTCCCCAGCCCTTCTCCCACACCAGAGGACACTGTCACTTACATCTTGGGCCGCTTGGCCAGCCTCGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS CCA 90 bp | AGATTATCCTCATTTCCCACCCCAGTGGGCAGCCCTAGGGCCTCCTaGAGATTCTTCAACATCTGTGACTCCCGCTCTCTCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLSSFPTPVGSPRAS*RFFNICDSRSLSSS Trigger: GGAGGAGGAGAGAGAGCGGGAGTCACAGATGTTGAAGAATCTCCAGGAGGCCCTAGGGCTGCCCACTGGGGTGGGAAATGAGGATAATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS CCA 90 bp | TGTCTTCAGGGTTTTCAGCAAGATTATCCTCATTTCCCACCCCAGTaGGCAGCCCTAGGGCCTCCTGGAGATTCTTCAACATCTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: CLQGFQQDYPHFPPQ*AALGPPGDSSTSVT Trigger: AGTCACAGATGTTGAAGAATCTCCAGGAGGCCCTAGGGCTGCCCACTGGGGTGGGAAATGAGGATAATCTTGCTGAAAACCCTGAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR CAA 90 bp | CTGGGAAAACAGTTTCCGAGGCACAAGTCAACAGAAAAGAAGATTAAATGTCAGGAGAGCAGGAAGCACTaGTGGCCAAGGCGCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGKQFPRHKSTEKKIKCQESRKH*WPRRRP Trigger: GGGCCTGCGCCTTGGCCACAAGTGCTTCCTGCTCTC...CTGACATTTAATCTTCTTTTCTGTTGACTTGTGCCTCGGAAACTGTTTTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS TCA 90 bp | CTAGAAGAAGGTGCTGTGGTGATTTCCTCTTCCTCTTCTTCCCCTTaGGTCTCTGTGGTCTCCCAGACCTCTTTGTCTTCAGGGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LEEGAVVISSSSSSP*VSVVSQTSLSSGFS Trigger: TGAAAACCCTGAAGACAAAGAGGTCTGGGAGACCACAGAGACTCAAGGGGAAGAAGAGGAAGAGGAAATCACCACAGCACCTTCTTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS-3UTR CAA 90 bp | GATTTGGGTGGAATCATTTCTTCAGACTGCCTTTGGTGCCCTATATGGAGTGAAGTCTCCCAGACCTCTTaGTCTTCAGGGTTTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DLGGIISSDCLWCPIWSEVSQTS*SSGFSA Trigger: TGCTGAAAACCCTGAAGACAAAGAGGTCTGGGAGAC...TTCACTCCATATAGGGCACCAAAGGCAGTCTGAAGAAATGATTCCACCCAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS CAA 72 bp | CGGTCCGCAGGCTGTGCTAAGCTCCCACCTCGCGCCTaGCACCGCGCCTGCGCCGCCGCCTGGGTCTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RSAGCAKLPPRA*HRACAAAWVSK Trigger: CTTCGAGACCCAGGCGGCGGCGCAGGCGCGGTGCAAGGCGCGAGGTGGGAGCTTAGCACAGCCTGCGGACCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS GCA 72 bp | GGTCCGCAGGCTGTGCTAAGCTCCCACCTCGCGCCTTaGACCGCGCCTGCGCCGCCGCCTGGGTCTCGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GPQAVLSSHLAP*TAPAPPPGSRS Trigger: ACTTCGAGACCCAGGCGGCGGCGCAGGCGCGGTGCAAGGCGCGAGGTGGGAGCTTAGCACAGCCTGCGGACC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS GCA 72 bp | TGTGCTAAGCTCCCACCTCGCGCCTTGCACCGCGCCTaGGCCGCCGCCTGGGTCTCGAAGTCTCGCGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CAKLPPRALHRA*AAAWVSKSRES Trigger: GCTCTCGCGAGACTTCGAGACCCAGGCGGCGGCGCAGGCGCGGTGCAAGGCGCGAGGTGGGAGCTTAGCACA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS CAA 90 bp | TGCGCCGCCGCCTGGGTCTCGAAGTCTCGCGAGAGCAGGAAGCACTaGTGGCCAAGGCGCAGGCCCTTCAGGCAGCCCTCCAAGCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: CAAAWVSKSRESRKH*WPRRRPFRQPSKRP Trigger: CGGCCGCTTGGAGGGCTGCCTGAAGGGCCTGCGCCTTGGCCACAAGTGCTTCCTGCTCTCGCGAGACTTCGAGACCCAGGCGGCGGCGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS GCA 72 bp | AGGCCCTTCAGGCAGCCCTCCAAGCGGCCGTGCTCCTaGTCAGCACGGTCCTGGACCTCCTTCAGGGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RPFRQPSKRPCS*SARSWTSFRAC Trigger: GCAAGCCCTGAAGGAGGTCCAGGACCGTGCTGAGCAGGAGCACGGCCGCTTGGAGGGCTGCCTGAAGGGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
||
| CDS TCA 72 bp | CCGCTCACAGTCATGGTCCCACCAAGAACCGTCGTCTaGGGCCTGGGCCACGCAGTTCTCCAGGACGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: PLTVMVPPRTVV*GLGHAVLQDAA Trigger: GGCGGCGTCCTGGAGAACTGCGTGGCCCAGGCCTCAGACGACGGTTCTTGGTGGGACCATGACTGTGAGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| CDS GCA 72 bp | GCCGCCATTGGGCTGATCCGGGCTGAGTGGATGTGTTaGCGCACTAGGCTGGGCGCCGGACTCCAGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: AAIGLIRAEWMC*RTRLGAGLQAE Trigger: TTCAGCCTGGAGTCCGGCGCCCAGCCTAGTGCGGCAACACATCCACTCAGCCCGGATCAGCCCAATGGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| CDS TCA 72 bp | CTCAGCACGGTCCTGGACCTCCTTCAGGGCTTGCACTaGGTCGCGGGTGTCACTCGCAGCATCCCGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSTVLDLLQGLH*VAGVTRSIPQL Trigger: CAGCTGCGGGATGCTGCGAGTGACACCCGCGACTCAGTGCAAGCCCTGAAGGAGGTCCAGGACCGTGCTGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| CDS CCA 72 bp | CAGTCATGGTCCCACCAAGAACCGTCGTCTGAGGCCTaGGCCACGCAGTTCTCCAGGACGCCGCCATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QSWSHQEPSSEA*ATQFSRTPPLG Trigger: GCCCAATGGCGGCGTCCTGGAGAACTGCGTGGCCCAGGCCTCAGACGACGGTTCTTGGTGGGACCATGACTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| CDS CCA 72 bp | TGGGTCTCGAAGTCTCGCGAGAGCAGGAAGCACTTGTaGCCAAGGCGCAGGCCCTTCAGGCAGCCCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: WVSKSRESRKHL*PRRRPFRQPSK Trigger: CTTGGAGGGCTGCCTGAAGGGCCTGCGCCTTGGCCACAAGTGCTTCCTGCTCTCGCGAGACTTCGAGACCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| CDS CCA 72 bp | ACACGGGTGTCCAAAACGTGCAGACGGACGTGCAATTaGTGTAGGCCTGCATCGAGGCTGGCCAAGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: TRVSKTCRRTCN*CRPASRLAKRP Trigger: GGGCCGCTTGGCCAGCCTCGATGCAGGCCTACACCAATTGCACGTCCGTCTGCACGTTTTGGACACCCGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| CDS GCA 72 bp | CCCTGGGTCAGCTCAACCACACGGGTGTCCAAAACGTaGAGACGGACGTGCAATTGGTGTAGGCCTGCATCG | + |
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Preference number: 6 (lower is better) Translates to: PWVSSTTRVSKT*RRTCNWCRPAS Trigger: CGATGCAGGCCTACACCAATTGCACGTCCGTCTGCACGTTTTGGACACCCGTGTGGTTGAGCTGACCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| CDS GCA 72 bp | TCAACCACACGGGTGTCCAAAACGTGCAGACGGACGTaGAATTGGTGTAGGCCTGCATCGAGGCTGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: STTRVSKTCRRT*NWCRPASRLAK Trigger: CTTGGCCAGCCTCGATGCAGGCCTACACCAATTGCACGTCCGTCTGCACGTTTTGGACACCCGTGTGGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| CDS CCA 72 bp | TCATTTCCCACCCCAGTGGGCAGCCCTAGGGCCTCCTaGAGATTCTTCAACATCTGTGACTCCCGCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SFPTPVGSPRAS*RFFNICDSRSL Trigger: GAGAGAGCGGGAGTCACAGATGTTGAAGAATCTCCAGGAGGCCCTAGGGCTGCCCACTGGGGTGGGAAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| CDS GCA 72 bp | AGAAGGGCTGGGGAAAGGGTTGGGACTAGAAGAAGGTaGTGTGGTGATTTCCTCTTCCTCTTCTTCCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RRAGERVGTRRR*CGDFLFLFFPL Trigger: CAAGGGGAAGAAGAGGAAGAGGAAATCACCACAGCACCTTCTTCTAGTCCCAACCCTTTCCCCAGCCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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| CDS CCA 72 bp | GGTTTTCAGCAAGATTATCCTCATTTCCCACCCCAGTaGGCAGCCCTAGGGCCTCCTGGAGATTCTTCAACA | + |
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Preference number: 6 (lower is better) Translates to: GFQQDYPHFPPQ*AALGPPGDSST Trigger: TGTTGAAGAATCTCCAGGAGGCCCTAGGGCTGCCCACTGGGGTGGGAAATGAGGATAATCTTGCTGAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004587.11 |
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