Pregenerated sensors for CLDN19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066058Ensembl transcript IDs: ENSMUST00000084309.12, ENSMUST00000094823.4
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCTGTCTGGCCTCGAGTGCTGTGCGCTGAGATCCTTCTGTGGCTaGGAGGCCCTCAGGGCCCAGCCTGTATCAGGCAGATGGGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: RLSGLECCALRSFCG*EALRAQPVSGRWVL Trigger: AAGGACCCATCTGCCTGATACAGGCTGGGCCCTGAGGGCCTCCCAGCCACAGAAGGATCTCAGCGCACAGCACTCGAGGCCAGACAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 90 bp | TGGAAGGCTGTCTGGCCTCGAGTGCTGTGCGCTGAGATCCTTCTGTaGCTGGGAGGCCCTCAGGGCCCAGCCTGTATCAGGCAGATGGGT | + |
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Preference number: 1 (lower is better) Translates to: WKAVWPRVLCAEILL*LGGPQGPACIRQMG Trigger: ACCCATCTGCCTGATACAGGCTGGGCCCTGAGGGCCTCCCAGCCACAGAAGGATCTCAGCGCACAGCACTCGAGGCCAGACAGCCTTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR GCA 90 bp | GGGCAGGCAGAGATGCAAAGCAGGAACCCTAAGTGCCTCCTGCTCTaGCTGTACCCCACCTCTGGAACCCACCTCTACAGCCCCAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: GQAEMQSRNPKCLLL*LYPTSGTHLYSPKS Trigger: GCTCTTGGGGCTGTAGAGGTGGGTTCCAGAGGTGGGGTACAGGCAGAGCAGGAGGCACTTAGGGTTCCTGCTTTGCATCTCTGCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 90 bp | GGCGTCTCCTCCAGTGGCCAGGACTCCGGAAAGGCAGGAGGTCGATaGGACTTCCTTTCTAGTCTTGCCTCTCCCCCACCCTCTTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: GVSSSGQDSGKAGGR*DFLSSLASPPPSSG Trigger: ACCAGAAGAGGGTGGGGGAGAGGCAAGACTAGAAAGGAAGTCCCATCGACCTCCTGCCTTTCCGGAGTCCTGGCCACTGGAGGAGACGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR TCA 90 bp | CCTTCCTCACCAAGGGAGCTACTACAGGGTCCTCTCACTGGGCTGTaGCCCAGCCCCCAGTTGGGCCTCACAGAGACTGTCTTTTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: PSSPRELLQGPLTGL*PSPQLGLTETVFSL Trigger: GAGGGAAAAGACAGTCTCTGTGAGGCCCAACTGGGGGCTGGGTCACAGCCCAGTGAGAGGACCCTGTAGTAGCTCCCTTGGTGAGGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 90 bp | TTCTGTGGCTGGGAGGCCCTCAGGGCCCAGCCTGTATCAGGCAGATaGGTCCTTCAGCAAATACGTTGGCAAATGAAGGAGCTGGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: FCGWEALRAQPVSGR*VLQQIRWQMKELVA Trigger: AGCCACCAGCTCCTTCATTTGCCAACGTATTTGCTGAAGGACCCATCTGCCTGATACAGGCTGGGCCCTGAGGGCCTCCCAGCCACAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 90 bp | ACATTTTACCTATGGAATGGTCTCCAGGCCAGGGGCTCCTCACCCTaGGGTCCTGCTCTCTTACTAGACCAGGCATTAGGTGGCCACCAG | + |
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Preference number: 1 (lower is better) Translates to: TFYLWNGLQARGSSP*GPALLLDQALGGHQ Trigger: CTGGTGGCCACCTAATGCCTGGTCTAGTAAGAGAGCAGGACCCCAGGGTGAGGAGCCCCTGGCCTGGAGACCATTCCATAGGTAAAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 90 bp | CTCCTCACCCTGGGGTCCTGCTCTCTTACTAGACCAGGCATTAGGTaGCCACCAGGGGTAGCTGTGATCTTCCTTCATGGAAGTTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: LLTLGSCSLTRPGIR*PPGVAVIFLHGSSG Trigger: ACCAGAACTTCCATGAAGGAAGATCACAGCTACCCCTGGTGGCCACCTAATGCCTGGTCTAGTAAGAGAGCAGGACCCCAGGGTGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR TCA 90 bp | ACTAAGTCATTGTGTCTGAGTGGAGGCTGGCCATCCACTTCCAAATaGCTCCAGTGTGCACCCAAGGTCAAGGACCACCTGACGGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: TKSLCLSGGWPSTSK*LQCAPKVKDHLTAS Trigger: TGAGGCCGTCAGGTGGTCCTTGACCTTGGGTGCACACTGGAGTCATTTGGAAGTGGATGGCCAGCCTCCACTCAGACACAATGACTTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR TCA 90 bp | TCATCCCCTAACTTGCCAGTGGCAGCGATAGCTTTAGGACCCTTCTaGGTCTTGAACCTCATCTTCCCCGGTCTTTCCTGGAGCCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: SSPNLPVAAIALGPF*VLNLIFPGLSWSLQ Trigger: CTGAAGGCTCCAGGAAAGACCGGGGAAGATGAGGTTCAAGACTCAGAAGGGTCCTAAAGCTATCGCTGCCACTGGCAAGTTAGGGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 90 bp | TGTTGGGTAACCGACTGTCAGAGGCTGAGGCCTACTCTCACAGATTaGAGAGCCACGCCTCCAGGTTTCACTAAAGGTCAGTGTCCTTAC | + |
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Preference number: 1 (lower is better) Translates to: CWVTDCQRLRPTLTD*RATPPGFTKGQCPY Trigger: GTAAGGACACTGACCTTTAGTGAAACCTGGAGGCGTGGCTCTCCAATCTGTGAGAGTAGGCCTCAGCCTCTGACAGTCGGTTACCCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR TCA 90 bp | AAGGCGTGTGACTGTCTGTCCTTCCAGTCTCCAGTGAGAGTGGAATaGGCTTCCTTTCATAGAGGAACAGACAATGCCACCCCACTGCCA | + |
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Preference number: 1 (lower is better) Translates to: KACDCLSFQSPVRVE*ASFHRGTDNATPLP Trigger: TGGCAGTGGGGTGGCATTGTCTGTTCCTCTATGAAAGGAAGCTCATTCCACTCTCACTGGAGACTGGAAGGACAGACAGTCACACGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 90 bp | CATCTGAACCACACACTTCGAAGGAACTGTGTGAACCCTGAAGCCTaGGTCCATAGACCAACTAAGTCATTGTGTCTGAGTGGAGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: HLNHTLRRNCVNPEA*VHRPTKSLCLSGGW Trigger: CCAGCCTCCACTCAGACACAATGACTTAGTTGGTCTATGGACCCAGGCTTCAGGGTTCACACAGTTCCTTCGAAGTGTGTGGTTCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 90 bp | AGCCAGCCTCACAACCAAAGACCAAGGGCTGCTAAGGAACAGACCTaGGGAGAGGCTATCTGTGTCACATTTGGTTCACAGGTTTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: SQPHNQRPRAAKEQT*GEAICVTFGSQVSN Trigger: GTTTGAAACCTGTGAACCAAATGTGACACAGATAGCCTCTCCCCAGGTCTGTTCCTTAGCAGCCCTTGGTCTTTGGTTGTGAGGCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 90 bp | TATGTCACACTCCATTTTCAAGCTTCTTCCCAGGCTACGACTTCCTaGTCTCTTCCCCCAGGGCCTGGGACTTCAGGAACTGAACACATA | + |
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Preference number: 1 (lower is better) Translates to: YVTLHFQASSQATTS*SLPPGPGTSGTEHI Trigger: TATGTGTTCAGTTCCTGAAGTCCCAGGCCCTGGGGGAAGAGACCAGGAAGTCGTAGCCTGGGAAGAAGCTTGAAAATGGAGTGTGACATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR TCA 90 bp | GTGCCTCCTGCTCTGCCTGTACCCCACCTCTGGAACCCACCTCTACAGCCCCAACGCTGGTTAGTGGGATaGGTGAAGGTTGAGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: VPPALPVPHLWNPPLQPQRWLVG*VKVEGV Trigger: GACTCCCTCAACCTTCACTCATCCCACTAACCAGCG...TTGGGGCTGTAGAGGTGGGTTCCAGAGGTGGGGTACAGGCAGAGCAGGAGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR CCA 90 bp | ATGCAAAGCAGGAACCCTAAGTGCCTCCTGCTCTGCCTGTACCCCACCTCTGGAGCTGAGATCCTTCTGTaGCTGGGAGGCCCTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: MQSRNPKCLLLCLYPTSGAEILL*LGGPQG Trigger: GCCCTGAGGGCCTCCCAGCCACAGAAGGATCTCAGC...TCCAGAGGTGGGGTACAGGCAGAGCAGGAGGCACTTAGGGTTCCTGCTTTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR TCA 90 bp | CAAGGGAGCTACTACAGGGTCCTCTCACTGGGCTGTGACCCAGCCCCCAGTTGGGCTGGGTCTTGCCTCTaGTCTCTCTTTGAGTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: QGSYYRVLSLGCDPAPSWAGSCL*SLFECL Trigger: CAGACACTCAAAGAGAGATCAGAGGCAAGACCCAGC...CCAACTGGGGGCTGGGTCACAGCCCAGTGAGAGGACCCTGTAGTAGCTCCCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR TCA 90 bp | CAAGGGAGCTACTACAGGGTCCTCTCACTGGGCTGTGACCCAGCCCCCAGTTGGTGGGAACAGATAGGATaGTGTCACACTTGGGGCCGA | + |
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Preference number: 2 (lower is better) Translates to: QGSYYRVLSLGCDPAPSWWEQIG*CHTWGR Trigger: TCGGCCCCAAGTGTGACATCATCCTATCTGTTCCCA...CCAACTGGGGGCTGGGTCACAGCCCAGTGAGAGGACCCTGTAGTAGCTCCCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR GCA 90 bp | AGTTGGCTCAGGGCCGTCCTGATGCCATCCACGTCCCTCTCCATTCCCTTCCTCGGGGGCAGGCAGAGATaGAAAGCAGGAACCCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: SWLRAVLMPSTSLSIPFLGGRQR*KAGTLS Trigger: ACTTAGGGTTCCTGCTTTGCATCTCTGCCTGCCCCC...GAGGAAGGGAATGGAGAGGGACGTGGATGGCATCAGGACGGCCCTGAGCCAACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR CCA 90 bp | TCCACGTCCCTCTCCATTCCCTTCCTCACCAAGGGAGCTACTACAGGGTCCTCTGGGTCACGTGTGGGCTaGGTCTTGCCTCTGATCTCT | + |
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Preference number: 2 (lower is better) Translates to: STSLSIPFLTKGATTGSSGSRVG*VLPLIS Trigger: AGAGATCAGAGGCAAGACCCAGCCCACACGTGACCC...AGAGGACCCTGTAGTAGCTCCCTTGGTGAGGAAGGGAATGGAGAGGGACGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCTGGGTCCATAGACCAACTAAGTCATTGTGTCTGAGTGGAGGCTGGCCAGATGCAGGACACTGTTaGCCCTCTGCTCACCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: EAWVHRPTKSLCLSGGWPDAGHC*PSAHLG Trigger: GCCCAGGTGAGCAGAGGGCCAACAGTGTCCTGCATC...TGGCCAGCCTCCACTCAGACACAATGACTTAGTTGGTCTATGGACCCAGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTTTACACACCCAGGGGGCCCTTGACCGAGGCGGGCAACTTAACAACAGGGTGTCTGAGTCTCTTTaGCTCAGAGGCTATGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: WPLHTQGALDRGGQLNNRVSESL*LRGYVE Trigger: CTCAACATAGCCTCTGAGTCAAAGAGACTCAGACAC...CCTGTTGTTAAGTTGCCCGCCTCGGTCAAGGGCCCCCTGGGTGTGTAAAGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR CCA 90 bp | CAGATTGGAGAGCCACGCCTCCAGGTTTCACTAAAGGTCAGTGTCCTTACGTCTGTCTGGCTCGAGTTCTaGGCAAGAGGGTTGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: QIGEPRLQVSLKVSVLTSVWLEF*ARGLLG Trigger: CCCCAGCAACCCTCTTGCCCAGAACTCGAGCCAGAC...AGACGTAAGGACACTGACCTTTAGTGAAACCTGGAGGCGTGGCTCTCCAATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGAACTTTCACGCCTGCTCCTGACAACCACAAGATGTAGCCAGCACAGCCTGAGACCAGGCATTAGGTaGCCACCAGGGGTAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SELSRLLLTTTRCSQHSLRPGIR*PPGVAV Trigger: CACAGCTACCCCTGGTGGCCACCTAATGCCTGGTCT...CAGGCTGTGCTGGCTACATCTTGTGGTTGTCAGGAGCAGGCGTGAAAGTTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR TCA 90 bp | CAAACTCTTAGCTTTAAACTCCTTCAGTTTCTCCCACACTCTTCCTTCCCACTCCCTCTCACTGGGCTGTaGCCCAGCCCCCAGTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: QTLSFKLLQFLPHSSFPLPLTGL*PSPQLG Trigger: GCCCAACTGGGGGCTGGGTCACAGCCCAGTGAGAGG...GAGTGGGAAGGAAGAGTGTGGGAGAAACTGAAGGAGTTTAAAGCTAAGAGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR CCA 90 bp | TTCATAGAGGAACAGACAATGCCACCCCACTGCCAGGTCCTCTCCTTGCAAGGACCTACTCTCACAGATTaGAGAGCCACGCCTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: FIEEQTMPPHCQVLSLQGPTLTD*RATPPG Trigger: ACCTGGAGGCGTGGCTCTCCAATCTGTGAGAGTAGG...TCCTTGCAAGGAGAGGACCTGGCAGTGGGGTGGCATTGTCTGTTCCTCTATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CAA 90 bp | AGTCTGACCTCTGACCTCGTGACCTGTATGCGCATCCAAACAATGTaGGGTAACCGACTGTCAGAGGCTGAGGCCTACTCTCACAGATTG | + |
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Preference number: 2 (lower is better) Translates to: SLTSDLVTCMRIQTM*GNRLSEAEAYSHRL Trigger: CAATCTGTGAGAGTAGGCCTCAGCCTCTGACAGTCGGTTACCCAACATTGTTTGGATGCGCATACAGGTCACGAGGTCAGAGGTCAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGAACTTTCACGCCTGCTCCTGACAACCACAAGATGTAGCCAGCACAGCCTGGAATTGGAGGGAATATaGAAGGCTGTCTGGCCTCGA | + |
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Preference number: 2 (lower is better) Translates to: SELSRLLLTTTRCSQHSLELEGI*KAVWPR Trigger: TCGAGGCCAGACAGCCTTCCATATTCCCTCCAATTC...CAGGCTGTGCTGGCTACATCTTGTGGTTGTCAGGAGCAGGCGTGAAAGTTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCAGCGATAGCTTTAGGACCCTTCTGAGTCTTGAACCTCATCTTCCCCGGCTTCAGCAAATACGTTaGCAAATGAAGGAGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: SGSDSFRTLLSLEPHLPRLQQIR*QMKELV Trigger: CACCAGCTCCTTCATTTGCCAACGTATTTGCTGAAG...CCGGGGAAGATGAGGTTCAAGACTCAGAAGGGTCCTAAAGCTATCGCTGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR-3UTR CCA 90 bp | TTCATAGAGGAACAGACAATGCCACCCCACTGCCAGGTCCTCTCCTTGCAAGGACTAGTGAATAAATCCTaGTCCTCATTCTGGTGTCGA | + |
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Preference number: 2 (lower is better) Translates to: FIEEQTMPPHCQVLSLQGLVNKS*SSFWCR Trigger: TCGACACCAGAATGAGGACCAGGATTTATTCACTAG...TCCTTGCAAGGAGAGGACCTGGCAGTGGGGTGGCATTGTCTGTTCCTCTATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CAA 90 bp | GAACACATAGCTATCTATGGTCCTTCTGGAATCAAAATGTATAACTaGCCAATTTCACTTCTGGGACTAAAGGAGCGACAGCGGCGGCGG | + |
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Preference number: 2 (lower is better) Translates to: EHIAIYGPSGIKMYN*PISLLGLKERQRRR Trigger: CCGCCGCCGCTGTCGCTCCTTTAGTCCCAGAAGTGAAATTGGCAAGTTATACATTTTGATTCCAGAAGGACCATAGATAGCTATGTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CAA 90 bp | CTAGTTTCCCTCAGTCCCTCAAAGGACTTAATCTTTTCTAATACGTaGTTACCTGGACCTCAAGACCTGAAGCCCTGTCATCTGGCTACA | + |
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Preference number: 2 (lower is better) Translates to: LVSLSPSKDLIFSNT*LPGPQDLKPCHLAT Trigger: TGTAGCCAGATGACAGGGCTTCAGGTCTTGAGGTCCAGGTAACAACGTATTAGAAAAGATTAAGTCCTTTGAGGGACTGAGGGAAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 72 bp | GGCCTCGAGTGCTGTGCGCTGAGATCCTTCTGTGGCTaGGAGGCCCTCAGGGCCCAGCCTGTATCAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GLECCALRSFCG*EALRAQPVSGR Trigger: TCTGCCTGATACAGGCTGGGCCCTGAGGGCCTCCCAGCCACAGAAGGATCTCAGCGCACAGCACTCGAGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 72 bp | GTCTGGCCTCGAGTGCTGTGCGCTGAGATCCTTCTGTaGCTGGGAGGCCCTCAGGGCCCAGCCTGTATCAGG | + |
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Preference number: 3 (lower is better) Translates to: VWPRVLCAEILL*LGGPQGPACIR Trigger: CCTGATACAGGCTGGGCCCTGAGGGCCTCCCAGCCACAGAAGGATCTCAGCGCACAGCACTCGAGGCCAGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 72 bp | AGTGGTGGACACCTCATCCCAGGAGAGGGGCAGCCCTaGAGTCCAGGGATAGGGTTGGGTGGCAGAAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: SGGHLIPGEGQP*SPGIGLGGRSL Trigger: CAGGCTTCTGCCACCCAACCCTATCCCTGGACTCCAGGGCTGCCCCTCTCCTGGGATGAGGTGTCCACCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR TCA 72 bp | AATATGGAAGGCTGTCTGGCCTCGAGTGCTGTGCGCTaGGATCCTTCTGTGGCTGGGAGGCCCTCAGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: NMEGCLASSAVR*DPSVAGRPSGP Trigger: GGGCCCTGAGGGCCTCCCAGCCACAGAAGGATCTCAGCGCACAGCACTCGAGGCCAGACAGCCTTCCATATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR TCA 72 bp | CCAAGGGAGCTACTACAGGGTCCTCTCACTGGGCTGTaGCCCAGCCCCCAGTTGGGCCTCACAGAGACTGTC | + |
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Preference number: 3 (lower is better) Translates to: PRELLQGPLTGL*PSPQLGLTETV Trigger: GACAGTCTCTGTGAGGCCCAACTGGGGGCTGGGTCACAGCCCAGTGAGAGGACCCTGTAGTAGCTCCCTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 72 bp | CCCTGCCCAGGGTATTGTTTAGTCTGGCTCGAGTTCTaGGCAAGAGGGTTGCTGGGGAGAGGGGGCTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: PCPGYCLVWLEF*ARGLLGRGGWA Trigger: TGCCCAGCCCCCTCTCCCCAGCAACCCTCTTGCCCAGAACTCGAGCCAGACTAAACAATACCCTGGGCAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR TCA 72 bp | GAGCTGAGGGGCTTTGGAGTTGGCTCAGGGCCGTCCTaGTGCCATCCACGTCCCTCTCCATTCCCTTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: ELRGFGVGSGPS*CHPRPSPFPSS Trigger: TGAGGAAGGGAATGGAGAGGGACGTGGATGGCATCAGGACGGCCCTGAGCCAACTCCAAAGCCCCTCAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 72 bp | AGGGTCCTCTCACTGGGCTGTGACCCAGCCCCCAGTTaGGCCTCACAGAGACTGTCTTTTCCCTCAGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: RVLSLGCDPAPS*ASQRLSFPSGG Trigger: TCCTCCTGAGGGAAAAGACAGTCTCTGTGAGGCCCAACTGGGGGCTGGGTCACAGCCCAGTGAGAGGACCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 72 bp | TTCCTCACCAAGGGAGCTACTACAGGGTCCTCTCACTaGGCTGTGACCCAGCCCCCAGTTGGGCCTCACAGA | + |
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Preference number: 3 (lower is better) Translates to: FLTKGATTGSSH*AVTQPPVGPHR Trigger: TCTGTGAGGCCCAACTGGGGGCTGGGTCACAGCCCAGTGAGAGGACCCTGTAGTAGCTCCCTTGGTGAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 72 bp | TCCAGTGGCCAGGACTCCGGAAAGGCAGGAGGTCGATaGGACTTCCTTTCTAGTCTTGCCTCTCCCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: SSGQDSGKAGGR*DFLSSLASPPP Trigger: GGGTGGGGGAGAGGCAAGACTAGAAAGGAAGTCCCATCGACCTCCTGCCTTTCCGGAGTCCTGGCCACTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR TCA 72 bp | AATGACTCCAGTGTGCACCCAAGGTCAAGGACCACCTaGCGGCCTCAGGCATCAGGAGGGGGCTCTTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: NDSSVHPRSRTT*RPQASGGGSSV Trigger: CACAGAAGAGCCCCCTCCTGATGCCTGAGGCCGTCAGGTGGTCCTTGACCTTGGGTGCACACTGGAGTCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR GCA 72 bp | GAGATGCAAAGCAGGAACCCTAAGTGCCTCCTGCTCTaGCTGTACCCCACCTCTGGAACCCACCTCTACAGC | + |
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Preference number: 3 (lower is better) Translates to: EMQSRNPKCLLL*LYPTSGTHLYS Trigger: GCTGTAGAGGTGGGTTCCAGAGGTGGGGTACAGGCAGAGCAGGAGGCACTTAGGGTTCCTGCTTTGCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR CCA 72 bp | CTATGGAATGGTCTCCAGGCCAGGGGCTCCTCACCCTaGGGTCCTGCTCTCTTACTAGACCAGGCATTAGGT | + |
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Preference number: 3 (lower is better) Translates to: LWNGLQARGSSP*GPALLLDQALG Trigger: ACCTAATGCCTGGTCTAGTAAGAGAGCAGGACCCCAGGGTGAGGAGCCCCTGGCCTGGAGACCATTCCATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR TCA 72 bp | TGGAGTCCAGGGATAGGGTTGGGTGGCAGAAGCCTGTaGGTTAAAGCAGGGGCCAGCACTCTCTGGATAGAG | + |
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Preference number: 3 (lower is better) Translates to: WSPGIGLGGRSL*VKAGASTLWIE Trigger: CTCTATCCAGAGAGTGCTGGCCCCTGCTTTAACTCACAGGCTTCTGCCACCCAACCCTATCCCTGGACTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| 3UTR GCA 72 bp | GGCTACACTTCAGGGTGCGGGAGCGTTGACAGTCATTaGAGGAGTAGGGTAAGAGCTGAGCTGAGGGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GYTSGCGSVDSH*RSRVRAELRGF Trigger: AAAGCCCCTCAGCTCAGCTCTTACCCTACTCCTGCAATGACTGTCAACGCTCCCGCACCCTGAAGTGTAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CCA 72 bp | TGGGAGGCCCTCAGGGCCCAGCCTGTATCAGGCAGATaGGTCCTTCAGCAAATACGTTGGCAAATGAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WEALRAQPVSGR*VLQQIRWQMKE Trigger: CTCCTTCATTTGCCAACGTATTTGCTGAAGGACCCATCTGCCTGATACAGGCTGGGCCCTGAGGGCCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR TCA 72 bp | CCAGGCCCCACCCTAGGCGCATGGGAACAGATAGGATaGTGTCACACTTGGGGCCGAATGTTCACTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PGPTLGAWEQIG*CHTWGRMFTSL Trigger: AAGAGAAGTGAACATTCGGCCCCAAGTGTGACATCATCCTATCTGTTCCCATGCGCCTAGGGTGGGGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR TCA 72 bp | TTGTGTCTGAGTGGAGGCTGGCCATCCACTTCCAAATaGCTCCAGTGTGCACCCAAGGTCAAGGACCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LCLSGGWPSTSK*LQCAPKVKDHL Trigger: CAGGTGGTCCTTGACCTTGGGTGCACACTGGAGTCATTTGGAAGTGGATGGCCAGCCTCCACTCAGACACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR TCA 72 bp | TCCTTGCAAGGAGCTCTGAACTTTCACGCCTGCTCCTaGCAACCACAAGATGTAGCCAGCACAGCCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLQGALNFHACS*QPQDVASTACL Trigger: CAGGCAGGCTGTGCTGGCTACATCTTGTGGTTGTCAGGAGCAGGCGTGAAAGTTCAGAGCTCCTTGCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CCA 72 bp | ATACCCCATCTACCCTGCCCAGGGTATTGTTTAGTCTaGCTCGAGTTCTGGGCAAGAGGGTTGCTGGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: IPHLPCPGYCLV*LEFWARGLLGR Trigger: TCTCCCCAGCAACCCTCTTGCCCAGAACTCGAGCCAGACTAAACAATACCCTGGGCAGGGTAGATGGGGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CCA 72 bp | ACCGACTGTCAGAGGCTGAGGCCTACTCTCACAGATTaGAGAGCCACGCCTCCAGGTTTCACTAAAGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TDCQRLRPTLTD*RATPPGFTKGQ Trigger: CTGACCTTTAGTGAAACCTGGAGGCGTGGCTCTCCAATCTGTGAGAGTAGGCCTCAGCCTCTGACAGTCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CCA 72 bp | CTGGGGTCCTGCTCTCTTACTAGACCAGGCATTAGGTaGCCACCAGGGGTAGCTGTGATCTTCCTTCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGSCSLTRPGIR*PPGVAVIFLHG Trigger: TCCATGAAGGAAGATCACAGCTACCCCTGGTGGCCACCTAATGCCTGGTCTAGTAAGAGAGCAGGACCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CCA 72 bp | CAGGCATCAGGAGGGGGCTCTTCTGTGGTTCTCACTTaGGGAACTTGTTTAGGACCAGAGGTATCCATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QASGGGSSVVLT*GTCLGPEVSMG Trigger: CCCCATGGATACCTCTGGTCCTAAACAAGTTCCCCAAGTGAGAACCACAGAAGAGCCCCCTCCTGATGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CCA 72 bp | CTCCATTTTCAAGCTTCTTCCCAGGCTACGACTTCCTaGTCTCTTCCCCCAGGGCCTGGGACTTCAGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: LHFQASSQATTS*SLPPGPGTSGT Trigger: AGTTCCTGAAGTCCCAGGCCCTGGGGGAAGAGACCAGGAAGTCGTAGCCTGGGAAGAAGCTTGAAAATGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CCA 72 bp | CTGAGGATGCAGGACACTGTTGGCCCTCTGCTCACCTaGGCTAGTTTCCCTCAGTCCCTCAAAGGACTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LRMQDTVGPLLT*ASFPQSLKGLN Trigger: ATTAAGTCCTTTGAGGGACTGAGGGAAACTAGCCCAGGTGAGCAGAGGGCCAACAGTGTCCTGCATCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCATAGAGGAACAGACAATGCCACCCCACTGCCAGGTCCTCTCCTTGCAAGGAACTTCCTTTCTAGTCTaGCCTCTCCCCCACCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FIEEQTMPPHCQVLSLQGTSFLV*PLPHPL Trigger: AAGAGGGTGGGGGAGAGGCAAGACTAGAAAGGAAGT...TCCTTGCAAGGAGAGGACCTGGCAGTGGGGTGGCATTGTCTGTTCCTCTATGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR TCA 72 bp | AGAGAGAAATCGCTGGTTAGTGGGATGAGTGAAGGTTaGGGGAGTCAGACCATGAGTTCAGGGCCAGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: REKSLVSGMSEG*GSQTMSSGPGA Trigger: TGCTCCTGGCCCTGAACTCATGGTCTGACTCCCTCAACCTTCACTCATCCCACTAACCAGCGATTTCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR TCA 72 bp | AACTTGCCAGTGGCAGCGATAGCTTTAGGACCCTTCTaGGTCTTGAACCTCATCTTCCCCGGTCTTTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NLPVAAIALGPF*VLNLIFPGLSW Trigger: CCAGGAAAGACCGGGGAAGATGAGGTTCAAGACTCAGAAGGGTCCTAAAGCTATCGCTGCCACTGGCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR TCA 72 bp | TCCTTACTGGGTCACGTGTGGGCTGGGTCTTGCCTCTaGTCTCTCTTTGAGTGTCTGAGTCTCTTTGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLLGHVWAGSCL*SLFECLSLFDS Trigger: TGAGTCAAAGAGACTCAGACACTCAAAGAGAGATCAGAGGCAAGACCCAGCCCACACGTGACCCAGTAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR TCA 72 bp | AAGCCTGGGTCCATAGACCAACTAAGTCATTGTGTCTaGGTGGAGGCTGGCCATCCACTTCCAAATGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: KPGSIDQLSHCV*VEAGHPLPNDS Trigger: GGAGTCATTTGGAAGTGGATGGCCAGCCTCCACTCAGACACAATGACTTAGTTGGTCTATGGACCCAGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR TCA 72 bp | CTGGTCTCTTCCCCCAGGGCCTGGGACTTCAGGAACTaGACACATAGCTATCTATGGTCCTTCTGGAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LVSSPRAWDFRN*THSYLWSFWNQ Trigger: TTGATTCCAGAAGGACCATAGATAGCTATGTGTTCAGTTCCTGAAGTCCCAGGCCCTGGGGGAAGAGACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CCA 72 bp | TGGGGGCCGACGGCTGCCATCAATCAGAAGATTAATTaGTCAGCAGTTCAGCAGATAGGTGATTTCCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WGPTAAINQKIN*SAVQQIGDFLS Trigger: GCTCAGGAAATCACCTATCTGCTGAACTGCTGACCAATTAATCTTCTGATTGATGGCAGCCGTCGGCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CCA 72 bp | CACAACCAAAGACCAAGGGCTGCTAAGGAACAGACCTaGGGAGAGGCTATCTGTGTCACATTTGGTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: HNQRPRAAKEQT*GEAICVTFGSQ Trigger: CTGTGAACCAAATGTGACACAGATAGCCTCTCCCCAGGTCTGTTCCTTAGCAGCCCTTGGTCTTTGGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR TCA 72 bp | TCTTTTCTAATACGTTGTTACCTGGACCTCAAGACCTaGAGCCCTGTCATCTGGCTACACTTCAGGGTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: SFLIRCYLDLKT*SPVIWLHFRVR Trigger: CCGCACCCTGAAGTGTAGCCAGATGACAGGGCTTCAGGTCTTGAGGTCCAGGTAACAACGTATTAGAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR TCA 72 bp | GACTGTCTGTCCTTCCAGTCTCCAGTGAGAGTGGAATaGGCTTCCTTTCATAGAGGAACAGACAATGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: DCLSFQSPVRVE*ASFHRGTDNAT Trigger: GGTGGCATTGTCTGTTCCTCTATGAAAGGAAGCTCATTCCACTCTCACTGGAGACTGGAAGGACAGACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR TCA 72 bp | CAAAGGCGTGTGACTGTCTGTCCTTCCAGTCTCCAGTaGGAGTGGAATGAGCTTCCTTTCATAGAGGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: QRRVTVCPSSLQ*EWNELPFIEEQ Trigger: CTGTTCCTCTATGAAAGGAAGCTCATTCCACTCTCACTGGAGACTGGAAGGACAGACAGTCACACGCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR TCA 72 bp | GTCTTTGAACCTCAAGACTGCACAGAAGCAAGAAGCTaGGCTGGCTCCTGGAGATTCAGTAATTTGGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VFEPQDCTEARS*AGSWRFSNLVG Trigger: TCCCACCAAATTACTGAATCTCCAGGAGCCAGCTCAGCTTCTTGCTTCTGTGCAGTCTTGAGGTTCAAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CCA 72 bp | CCTGTATCAGGCAGATGGGTCCTTCAGCAAATACGTTaGCAAATGAAGGAGCTGGTGGCTAAGCTAGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PVSGRWVLQQIR*QMKELVAKLVN Trigger: ATTCACTAGCTTAGCCACCAGCTCCTTCATTTGCCAACGTATTTGCTGAAGGACCCATCTGCCTGATACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CCA 72 bp | CACACACTTCGAAGGAACTGTGTGAACCCTGAAGCCTaGGTCCATAGACCAACTAAGTCATTGTGTCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HTLRRNCVNPEA*VHRPTKSLCLS Trigger: ACTCAGACACAATGACTTAGTTGGTCTATGGACCCAGGCTTCAGGGTTCACACAGTTCCTTCGAAGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CCA 72 bp | GGAACAGACCTGGGGAGAGGCTATCTGTGTCACATTTaGTTCACAGGTTTCAAACTCTGGGTTAATCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GTDLGRGYLCHI*FTGFKLWVNQA Trigger: AGCCTGATTAACCCAGAGTTTGAAACCTGTGAACCAAATGTGACACAGATAGCCTCTCCCCAGGTCTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR-3UTR CAA 90 bp | CAAACTCTTAGCTTTAAACTCCTTCAGTTTCTCCCACACTCTTCCTTCCCACTCCCTTCAGCAAATACGTaGGCAAATGAAGGAGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: QTLSFKLLQFLPHSSFPLPSANT*ANEGAG Trigger: ACCAGCTCCTTCATTTGCCAACGTATTTGCTGAAGG...GAGTGGGAAGGAAGAGTGTGGGAGAAACTGAAGGAGTTTAAAGCTAAGAGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| CDS-3UTR CCA 90 bp | GTGCCTCCTGCTCTGCCTGTACCCCACCTCTGGAACCCACCTCTACAGCCCCAATGGCCACACGGCTCTTaGCAGTGGGGTTACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPPALPVPHLWNPPLQPQWPHGS*QWGYCL Trigger: GAGACAGTAACCCCACTGCCAAGAGCCGTGTGGCCA...TTGGGGCTGTAGAGGTGGGTTCCAGAGGTGGGGTACAGGCAGAGCAGGAGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CAA 72 bp | GGCTGGAACCCTGGCCTTTACACACCCAGGGGGCCCTaGACCGAGGCGGGCAACTTAACAACAGGTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GWNPGLYTPRGP*TEAGNLTTGLQ Trigger: TTGCAGACCTGTTGTTAAGTTGCCCGCCTCGGTCAAGGGCCCCCTGGGTGTGTAAAGGCCAGGGTTCCAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| CDS-3UTR TCA 90 bp | CAGATTGGAGAGCCACGCCTCCAGGTTTCACTAAAGGTCAGTGTCCTTACGTCTGGGCAGTGCTGGCGATaGTGCCCACCCAGCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QIGEPRLQVSLKVSVLTSGQCWR*CPPSRP Trigger: TGGGCGGCTGGGTGGGCATCATCGCCAGCACTGCCC...AGACGTAAGGACACTGACCTTTAGTGAAACCTGGAGGCGTGGCTCTCCAATCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| CDS-3UTR TCA 90 bp | TTTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCCTGGCTGGGCAGTGCTGGCGATaGTGCCCACCCAGCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPKISNTQSRGGRGKGLAGQCWR*CPPSRP Trigger: TGGGCGGCTGGGTGGGCATCATCGCCAGCACTGCCC...AGCCAGGCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
||
| CDS-3UTR TCA 90 bp | CGCCTCCAGGTTTCACTAAAGGTCAGTGTCCTTACGTCTGATGTGGAGACAGTCACCTGCCCGGTGCTCTaGGAGGCGCAAGACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLQVSLKVSVLTSDVETVTCPVL*EAQDIH Trigger: GTGGATGTCTTGCGCCTCTCAGAGCACCGGGCAGGT...GACTGTCTCCACATCAGACGTAAGGACACTGACCTTTAGTGAAACCTGGAGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| CDS-3UTR TCA 90 bp | TTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCCTGGCTGACCTGCCCGGTGCTCTaGGAGGCGCAAGACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FQKYQTHSLEVVGGRAWLTCPVL*EAQDIH Trigger: GTGGATGTCTTGCGCCTCTCAGAGCACCGGGCAGGT...CAGCCAGGCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
||
| 3UTR CAA 72 bp | TCAGGCATCAGGAGGGGGCTCTTCTGTGGTTCTCACTaGGGGAACTTGTTTAGGACCAGAGGTATCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGIRRGLFCGSH*GNLFRTRGIHG Trigger: CCCATGGATACCTCTGGTCCTAAACAAGTTCCCCAAGTGAGAACCACAGAAGAGCCCCCTCCTGATGCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| CDS-3UTR CCA 90 bp | TTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCCTGGCTGAGAGCGATAGGGCTGTaGGATGCTGTTCGCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQKYQTHSLEVVGGRAWLRAIGL*DAVRPL Trigger: GAGAGGGCGAACAGCATCCCACAGCCCTATCGCTCT...CAGCCAGGCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
||
| 3UTR CAA 72 bp | AGGGATCCATATACCCCATCTACCCTGCCCAGGGTATaGTTTAGTCTGGCTCGAGTTCTGGGCAAGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RDPYTPSTLPRV*FSLARVLGKRV Trigger: AACCCTCTTGCCCAGAACTCGAGCCAGACTAAACAATACCCTGGGCAGGGTAGATGGGGTATATGGATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CAA 72 bp | TCTGACCTCGTGACCTGTATGCGCATCCAAACAATGTaGGGTAACCGACTGTCAGAGGCTGAGGCCTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDLVTCMRIQTM*GNRLSEAEAYS Trigger: AGAGTAGGCCTCAGCCTCTGACAGTCGGTTACCCAACATTGTTTGGATGCGCATACAGGTCACGAGGTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| CDS-3UTR GCA 90 bp | GAAGCCTGGGTCCATAGACCAACTAAGTCATTGTGTCTGAGTGGAGGCTGGCCACAAAGTACAGAGACCTaGCAAGAGGAAGAGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: EAWVHRPTKSLCLSGGWPQSTET*QEEEST Trigger: GGTGCTCTCTTCCTCTTGGCAGGTCTCTGTACTTTG...TGGCCAGCCTCCACTCAGACACAATGACTTAGTTGGTCTATGGACCCAGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| CDS-3UTR CCA 90 bp | TTTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCCTGGCTTGGCCACACGGCTCTTaGCAGTGGGGTTACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FPKISNTQSRGGRGKGLAWPHGS*QWGYCL Trigger: GAGACAGTAACCCCACTGCCAAGAGCCGTGTGGCCA...AGCCAGGCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
||
| CDS-3UTR CCA 90 bp | TTTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCCTGGCTAGAGCGATAGGGCTGTaGGATGCTGTTCGCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FPKISNTQSRGGRGKGLARAIGL*DAVRPL Trigger: GAGAGGGCGAACAGCATCCCACAGCCCTATCGCTCT...AGCCAGGCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
||
| CDS-3UTR GCA 90 bp | CACTTCTCTTTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGCCGGCTCTGGGCATGTaGAGCAGAGAAAGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: HFSFQKYQTHSLEVVGGRPALGM*SRERNR Trigger: GCGGTTCCTTTCTCTGCTGCACATGCCCAGAGCCGG...CCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAAAGAGAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
||
| CDS-3UTR GCA 90 bp | TTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCCTGGCTGCAAAGTACAGAGACCTaGCAAGAGGAAGAGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FQKYQTHSLEVVGGRAWLQSTET*QEEEST Trigger: GGTGCTCTCTTCCTCTTGGCAGGTCTCTGTACTTTG...CAGCCAGGCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
||
| 3UTR CAA 72 bp | TTTGAGTGTCTGAGTCTCTTTGACTCAGAGGCTATGTaGAGGACCAGGTGTTTGGAGCTCCAGACCGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FECLSLFDSEAM*RTRCLELQTEF Trigger: GAACTCGGTCTGGAGCTCCAAACACCTGGTCCTCAACATAGCCTCTGAGTCAAAGAGACTCAGACACTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| CDS-3UTR TCA 90 bp | TTCTCTTTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCCCAGGAGTGCTGGGGTTaGAGAATTCCTGTGTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFQKYQTHSLEVVGGRAQECWG*RIPVLP Trigger: TGGTAACACAGGAATTCTTCAACCCCAGCACTCCTG...GGCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAAAGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCCGATGATGGCATCGCCTaGATAGGAAGACTGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFQKYQTHSLEVVGGRADDGIA*IGRLLP Trigger: TGGAAGCAGTCTTCCTATGCAGGCGATGCCATCATC...GGCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAAAGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
||
| CDS-3UTR GCA 90 bp | CACTTCTCTTTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGATGATGGCATCGCCTaGATAGGAAGACTGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HFSFQKYQTHSLEVVGGRDDGIA*IGRLLP Trigger: TGGAAGCAGTCTTCCTATGCAGGCGATGCCATCATC...CCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAAAGAGAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
||
| 3UTR CAA 72 bp | CCTAGGCGCATGGGAACAGATAGGATGATGTCACACTaGGGGCCGAATGTTCACTTCTCTTTCCAAAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: PRRMGTDRMMSH*GPNVHFSFQKY Trigger: ATATTTTTGGAAAGAGAAGTGAACATTCGGCCCCAAGTGTGACATCATCCTATCTGTTCCCATGCGCCTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CAA 72 bp | CTCAGTCCCTCAAAGGACTTAATCTTTTCTAATACGTaGTTACCTGGACCTCAAGACCTGAAGCCCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSPSKDLIFSNT*LPGPQDLKPCH Trigger: ATGACAGGGCTTCAGGTCTTGAGGTCCAGGTAACAACGTATTAGAAAAGATTAAGTCCTTTGAGGGACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| 3UTR CAA 72 bp | GCTATCTATGGTCCTTCTGGAATCAAAATGTATAACTaGCCAATTTCACTTCTGGGACTAAAGGAGCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AIYGPSGIKMYN*PISLLGLKERQ Trigger: CTGTCGCTCCTTTAGTCCCAGAAGTGAAATTGGCAAGTTATACATTTTGATTCCAGAAGGACCATAGATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
||
| CDS CCA 90 bp | TCCAGAGCGATAGGGCTGTGGGATGCTGTTCGCCCTCTCCGGCTCTaGGCATGTGCAGCAGAGAAAGGAACCGCCCAGCATGGCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRAIGLWDAVRPLRL*ACAAEKGTAQHGQA Trigger: GGCCTGGCCATGCTGGGCGGTTCCTTTCTCTGCTGCACATGCCCAGAGCCGGAGAGGGCGAACAGCATCCCACAGCCCTATCGCTCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS GCA 90 bp | ACTCTCTGGCAGCAGTTGAGGGTCCAGAGCGATAGGGCTGTGGGATaGTGTTCGCCCTCTCCGGCTCTGGGCATGTGCAGCAGAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: TLWQQLRVQSDRAVG*CSPSPALGMCSRER Trigger: CCTTTCTCTGCTGCACATGCCCAGAGCCGGAGAGGGCGAACAGCATCCCACAGCCCTATCGCTCTGGACCCTCAACTGCTGCCAGAGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| CDS GCA 90 bp | GTTCTCTGGCAGCAGTTGAGGGTCCAGAGCGATAGGGCTGTGGGATaGTGTTCGCCCTCTCCGGCTCTGGGCATGTGCAGCAGAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: VLWQQLRVQSDRAVG*CSPSPALGMCSRER Trigger: CCTTTCTCTGCTGCACATGCCCAGAGCCGGAGAGGGCGAACAGCATCCCACAGCCCTATCGCTCTGGACCCTCAACTGCTGCCAGAGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084309.12 |
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| CDS-3UTR CAA 90 bp | CAAGGGAGCTACTACAGGGTCCTCTCACTGGGCTGTGACCCAGCCCCCAGTTGGACTCTCTGGCAGCAGTaGAGGGTCCAGAGCGATAGG | + |
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Preference number: 5 (lower is better) Translates to: QGSYYRVLSLGCDPAPSWTLWQQ*RVQSDR Trigger: CCTATCGCTCTGGACCCTCAACTGCTGCCAGAGAGT...CCAACTGGGGGCTGGGTCACAGCCCAGTGAGAGGACCCTGTAGTAGCTCCCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| CDS CCA 90 bp | AGAGGAAGAGAGCACCTCCGGAGATGGCCACACGGCTCTTGGCAGTaGGGTTACTGTCTCCAACCCGAGTGCACTTCATGCCCACGACAC | + |
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Preference number: 5 (lower is better) Translates to: RGREHLRRWPHGSWQ*GYCLQPECTSCPRH Trigger: GTGTCGTGGGCATGAAGTGCACTCGGGTTGGAGACAGTAACCCCACTGCCAAGAGCCGTGTGGCCATCTCCGGAGGTGCTCTCTTCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS CCA 90 bp | CTGCCAAGAGGAAGAGAGCACCTCCGGAGATGGCCACACGGCTCTTaGCAGTGGGGTTACTGTCTCCAACCCGAGTGCACTTCATGCCCA | + |
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Preference number: 5 (lower is better) Translates to: LPRGREHLRRWPHGS*QWGYCLQPECTSCP Trigger: TGGGCATGAAGTGCACTCGGGTTGGAGACAGTAACCCCACTGCCAAGAGCCGTGTGGCCATCTCCGGAGGTGCTCTCTTCCTCTTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS-3UTR CAA 90 bp | GTGCCTCCTGCTCTGCCTGTACCCCACCTCTGGAACCCACCTCTACAGCCCCAAACAGGAGTGCTGGGGTaGAAGAATTCCTGTGTTACC | + |
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Preference number: 5 (lower is better) Translates to: VPPALPVPHLWNPPLQPQTGVLG*KNSCVT Trigger: GGTAACACAGGAATTCTTCAACCCCAGCACTCCTGT...TTGGGGCTGTAGAGGTGGGTTCCAGAGGTGGGGTACAGGCAGAGCAGGAGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094823.4 |
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| CDS-3UTR CAA 90 bp | TTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCCTGGCTGACACCCAGGGGGCCCTaGACCGAGGCGGGCAACTTA | + |
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Preference number: 5 (lower is better) Translates to: FQKYQTHSLEVVGGRAWLTPRGP*TEAGNL Trigger: TAAGTTGCCCGCCTCGGTCAAGGGCCCCCTGGGTGT...CAGCCAGGCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000084309.12 |
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| CDS GCA 90 bp | TACCAGGGTAGCATACCAGGAGACAGCAGTCAAAGTACAGAGACCTaGCAAGAGGAAGAGAGCACCTCCGGAGATGGCCACACGGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: YQGSIPGDSSQSTET*QEEESTSGDGHTAL Trigger: AAGAGCCGTGTGGCCATCTCCGGAGGTGCTCTCTTCCTCTTGGCAGGTCTCTGTACTTTGACTGCTGTCTCCTGGTATGCTACCCTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS-3UTR CAA 90 bp | TTCTCTTTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCCGTTCTCTGGCAGCAGTaGAGGGTCCAGAGCGATAGG | + |
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Preference number: 5 (lower is better) Translates to: FSFQKYQTHSLEVVGGRAVLWQQ*RVQSDR Trigger: CCTATCGCTCTGGACCCTCAACTGCTGCCAGAGAAC...GGCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAAAGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084309.12 |
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| CDS-3UTR CAA 90 bp | CTTCTCTTTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCATCGTAGAGTTTGCATaGCACCTGCCCGGTGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LLFPKISNTQSRGGRGKGIVEFA*HLPGAL Trigger: CAGAGCACCGGGCAGGTGCAATGCAAACTCTACGAT...GCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAAAGAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS-3UTR CAA 90 bp | CTCTTTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCCTGAATTCGTACCTGGCATaGACAGGAGTGCTGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: LFPKISNTQSRGGRGKGLNSYLA*TGVLGL Trigger: CAACCCCAGCACTCCTGTCAATGCCAGGTACGAATT...CAGGCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS-3UTR CAA 90 bp | TCTTTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGGCCTGGACAGGAGTGCTGGGGTaGAAGAATTCCTGTGTTACC | + |
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Preference number: 5 (lower is better) Translates to: SFQKYQTHSLEVVGGRAWTGVLG*KNSCVT Trigger: GGTAACACAGGAATTCTTCAACCCCAGCACTCCTGT...CCAGGCCCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS-3UTR CAA 90 bp | CACTTCTCTTTCCAAAAATATCAAACACACAGTCTAGAGGTGGTAGGGGGAAGGAATTCGTACCTGGCATaGACAGGAGTGCTGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: HFSFQKYQTHSLEVVGGRNSYLA*TGVLGL Trigger: CAACCCCAGCACTCCTGTCAATGCCAGGTACGAATT...CCTTCCCCCTACCACCTCTAGACTGTGTGTTTGATATTTTTGGAAAGAGAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS GCA 72 bp | GTGGGATGCTGTTCGCCCTCTCCGGCTCTGGGCATGTaGAGCAGAGAAAGGAACCGCCCAGCATGGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: VGCCSPSPALGM*SRERNRPAWPG Trigger: GCCTGGCCATGCTGGGCGGTTCCTTTCTCTGCTGCACATGCCCAGAGCCGGAGAGGGCGAACAGCATCCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS GCA 72 bp | CAGCAGTTGAGGGTCCAGAGCGATAGGGCTGTGGGATaGTGTTCGCCCTCTCCGGCTCTGGGCATGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QQLRVQSDRAVG*CSPSPALGMCS Trigger: GCTGCACATGCCCAGAGCCGGAGAGGGCGAACAGCATCCCACAGCCCTATCGCTCTGGACCCTCAACTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS CAA 90 bp | CCTGCCAAGAGGAAGAGAGCACCTCCGGAGATGGCCACACGGCTCTaGGCAGTGGGGTTACTGTCTCCAACCCGAGTGCACTTCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: PAKRKRAPPEMATRL*AVGLLSPTRVHFMP Trigger: GGGCATGAAGTGCACTCGGGTTGGAGACAGTAACCCCACTGCCAAGAGCCGTGTGGCCATCTCCGGAGGTGCTCTCTTCCTCTTGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS CCA 72 bp | GAGCACCTCCGGAGATGGCCACACGGCTCTTGGCAGTaGGGTTACTGTCTCCAACCCGAGTGCACTTCATGC | + |
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Preference number: 6 (lower is better) Translates to: EHLRRWPHGSWQ*GYCLQPECTSC Trigger: GCATGAAGTGCACTCGGGTTGGAGACAGTAACCCCACTGCCAAGAGCCGTGTGGCCATCTCCGGAGGTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS CCA 72 bp | GGAAGAGAGCACCTCCGGAGATGGCCACACGGCTCTTaGCAGTGGGGTTACTGTCTCCAACCCGAGTGCACT | + |
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Preference number: 6 (lower is better) Translates to: GREHLRRWPHGS*QWGYCLQPECT Trigger: AGTGCACTCGGGTTGGAGACAGTAACCCCACTGCCAAGAGCCGTGTGGCCATCTCCGGAGGTGCTCTCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS CCA 72 bp | ATAGGGCTGTGGGATGCTGTTCGCCCTCTCCGGCTCTaGGCATGTGCAGCAGAGAAAGGAACCGCCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: IGLWDAVRPLRL*ACAAEKGTAQH Trigger: ATGCTGGGCGGTTCCTTTCTCTGCTGCACATGCCCAGAGCCGGAGAGGGCGAACAGCATCCCACAGCCCTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS CAA 72 bp | AGGAAGAGAGCACCTCCGGAGATGGCCACACGGCTCTaGGCAGTGGGGTTACTGTCTCCAACCCGAGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: RKRAPPEMATRL*AVGLLSPTRVH Trigger: GTGCACTCGGGTTGGAGACAGTAACCCCACTGCCAAGAGCCGTGTGGCCATCTCCGGAGGTGCTCTCTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS CCA 72 bp | AGAGACCTGCCAAGAGGAAGAGAGCACCTCCGGAGATaGCCACACGGCTCTTGGCAGTGGGGTTACTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RDLPRGREHLRR*PHGSWQWGYCL Trigger: GAGACAGTAACCCCACTGCCAAGAGCCGTGTGGCCATCTCCGGAGGTGCTCTCTTCCTCTTGGCAGGTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS GCA 72 bp | TTCGTAGAGGCCCACGGCAGTGATGATGGCATCGCCTaGATAGGAAGACTGCTTCCACTGTGGCAGGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: FVEAHGSDDGIA*IGRLLPLWQGS Trigger: ACTGCCCTGCCACAGTGGAAGCAGTCTTCCTATGCAGGCGATGCCATCATCACTGCCGTGGGCCTCTACGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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| CDS TCA 72 bp | GGCGGGCAACTTAACAACAGGTTCTCTGGCAGCAGTTaGGGGTCCAGAGCGATAGGGCTGTGGGATGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GGQLNNRFSGSS*GSRAIGLWDAV Trigger: AACAGCATCCCACAGCCCTATCGCTCTGGACCCTCAACTGCTGCCAGAGAACCTGTTGTTAAGTTGCCCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084309.12 |
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| CDS CAA 90 bp | AGAGCTGGGCCAAATTCGTACCTGGCATTGACAGGAGTGCTGGGGTaGAAGAATTCCTGTGTTACCAGGGTAGCATACCAGGAGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: RAGPNSYLALTGVLG*KNSCVTRVAYQETA Trigger: TGCTGTCTCCTGGTATGCTACCCTGGTAACACAGGAATTCTTCAACCCCAGCACTCCTGTCAATGCCAGGTACGAATTTGGCCCAGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084309.12 ENSMUST00000094823.4 |
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