Pregenerated sensors for CLDN18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032473Ensembl transcript IDs: ENSMUST00000035048.12, ENSMUST00000112882.9, ENSMUST00000131922.2, ENSMUST00000136429.8
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTTCATCCCAGCCCCAGGTCAGACTCTCTTGTCTCCTAGGGCTATaGATAAGCGTCCTGGTGCGTCCATGGTCAGACAGGCTAAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: LSSQPQVRLSCLLGL*ISVLVRPWSDRLSC Trigger: ACAGCTTAGCCTGTCTGACCATGGACGCACCAGGACGCTTATCCATAGCCCTAGGAGACAAGAGAGTCTGACCTGGGGCTGGGATGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR GCA 90 bp | GTGGCCTCCAGGCACCCAGGCTTCTGCTCTGGCAGATACAGATTCTaGCAGCAAGAGCAATTCTGGGAAGACGCATGCATCTTTGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: VASRHPGFCSGRYRF*QQEQFWEDACIFEV Trigger: TACTTCAAAGATGCATGCGTCTTCCCAGAATTGCTCTTGCTGGCAGAATCTGTATCTGCCAGAGCAGAAGCCTGGGTGCCTGGAGGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR GCA 90 bp | TCACCCCGCTTGTTCCAAGAACCTCCCTTCATTACGGCTTCTGAGTaGTCAGAAACCATTAACCAGGCTGAGCCCAGACCTAAGTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: SPRLFQEPPFITASE*SETINQAEPRPKWP Trigger: AGGCCACTTAGGTCTGGGCTCAGCCTGGTTAATGGTTTCTGAGCACTCAGAAGCCGTAATGAAGGGAGGTTCTTGGAACAAGCGGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR CCA 90 bp | GGCGCAGCTGTCAGAACTGCAAAACTGCCTACAGGACCAAAGAAGTaGCCCTGTCGATTGGCAGTAACTGTAGCTATGCCAGACACACAG | + |
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Preference number: 1 (lower is better) Translates to: GAAVRTAKLPTGPKK*PCRLAVTVAMPDTQ Trigger: CTGTGTGTCTGGCATAGCTACAGTTACTGCCAATCGACAGGGCCACTTCTTTGGTCCTGTAGGCAGTTTTGCAGTTCTGACAGCTGCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR TCA 90 bp | TCTAGTGGAAAGCTCTGGAAGGGCCTTGCTGGAATCAGCAGATGCTaGGCAGAGCGAACAGGCTCGCTTGCCTTCTTTGAAAATCACTGT | + |
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Preference number: 1 (lower is better) Translates to: SSGKLWKGLAGISRC*AERTGSLAFFENHC Trigger: ACAGTGATTTTCAAAGAAGGCAAGCGAGCCTGTTCGCTCTGCTCAGCATCTGCTGATTCCAGCAAGGCCCTTCCAGAGCTTTCCACTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| 3UTR CCA 90 bp | TGTCAGTTGAAATCAACAAGGGAACAAGGTAGACTCCCGTTGCTTTaGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTT | + |
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Preference number: 1 (lower is better) Translates to: CQLKSTREQGRLPLL*GELFLGKGSSCTQV Trigger: AACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTCTACCTTGTTCCCTTGTTGATTTCAACTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAGACTCCCGTTGCTTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCCCCGTTGCTTTGGGGTaGGCTCTTCTTGGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: GRLPLLWGELFLGKGSSCPVALG*ALLGEG Trigger: CCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGG...GCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGGTGGGGTGAGCTCTTCTTaGGGAAGGGTTCCTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: FGVSSSWGRVPPAHRLAGGVSSS*GRVPPA Trigger: TGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCC...ACCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTCAGGTTCAGGTGGGTTTTAGAGAGCACCCTATCTCCATTTCCTGGGAGCCCGTTGCTTTGGGGTaGGCTCTTCTTGGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LFQVQVGFREHPISISWEPVALG*ALLGEG Trigger: CCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGG...CTCCCAGGAAATGGAGATAGGGTGCTCTCTAAAACCCACCTGAACCTGAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR-3UTR TCA 90 bp | ATGAGACTGTTCATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTCCCGTTGCTTTGGGGTaGGCTCTTCTTGGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: MRLFIVFCAGTPIVDLLVPVALG*ALLGEG Trigger: CCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGG...AACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATGAACAGTCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136429.8 |
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| 3UTR-3UTR CCA 90 bp | AGACTGTTCATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGGGGTGAGCTCTTCTTaGGGAAGGGTTCCTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RLFIVFCAGTPIVDLLVSGVSSS*GRVPPA Trigger: TGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCC...AGAAACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATGAACAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136429.8 |
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| 3UTR-3UTR GCA 90 bp | AACTGCAAAACTGCCTACAGGACCAAAGAAGTGGCCCTGTCGATTGGCAGTAACGCTCTGGAAGGGCCTTaGTGGAATCAGCAGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: NCKTAYRTKEVALSIGSNALEGP*WNQQML Trigger: CAGCATCTGCTGATTCCAGCAAGGCCCTTCCAGAGC...GTTACTGCCAATCGACAGGGCCACTTCTTTGGTCCTGTAGGCAGTTTTGCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGAACTGCAAAACTGCCTACAGGACCAAAGAAGTGGCCCTGTCGATTGGCAGAGGCAGACACATGTaGCCAAGACTGTCTAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: CQNCKTAYRTKEVALSIGRGRHM*PRLSSL Trigger: GAGGCTAGACAGTCTTGGCCACATGTGTCTGCCTCT...GCCAATCGACAGGGCCACTTCTTTGGTCCTGTAGGCAGTTTTGCAGTTCTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR-3UTR CCA 90 bp | TGCCCGGCGCAGCTGTCAGAACTGCAAAACTGCCTACAGGACCAAAGAAGTGGCTATTATCAGTCAAGTTaGGGGTGGGTAAGGCACAAT | + |
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Preference number: 2 (lower is better) Translates to: CPAQLSELQNCLQDQRSGYYQSS*GWVRHN Trigger: ATTGTGCCTTACCCACCCCCAACTTGACTGATAATA...GCCACTTCTTTGGTCCTGTAGGCAGTTTTGCAGTTCTGACAGCTGCGCCGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR CAA 90 bp | TTCAGATGTCAGTTGAAATCAACAAGGGAACAAGGTAGACTCCCGTaGCTTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: FRCQLKSTREQGRLP*LWGELFLGKGSSCT Trigger: TGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTCTACCTTGTTCCCTTGTTGATTTCAACTGACATCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
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| 3UTR CAA 90 bp | AGAACTGCAAAACTGCCTACAGGACCAAAGAAGTGGCCCTGTCGATaGGCAGTAACTGTAGCTATGCCAGACACACAGGTCTCTATTGGA | + |
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Preference number: 2 (lower is better) Translates to: RTAKLPTGPKKWPCR*AVTVAMPDTQVSIG Trigger: TCCAATAGAGACCTGTGTGTCTGGCATAGCTACAGTTACTGCCAATCGACAGGGCCACTTCTTTGGTCCTGTAGGCAGTTTTGCAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR-3UTR CCA 90 bp | GCTCGCTTGCCTTCTTTGAAAATCACTGTGGCGAGTAATGTTCTAGATCACCACAGAGGCAGACACATGTaGCCAAGACTGTCTAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: ARLPSLKITVASNVLDHHRGRHM*PRLSSL Trigger: GAGGCTAGACAGTCTTGGCCACATGTGTCTGCCTCT...GTGGTGATCTAGAACATTACTCGCCACAGTGATTTTCAAAGAAGGCAAGCGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| 3UTR CAA 90 bp | GGGCATTCCAGACTAAGCACTAATGTTCCAGCCAAGGAGGTGGCTTaGGGCTGGGAAAGGATTCATAGTCCAATGGATTTTGTTAGGACT | + |
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Preference number: 2 (lower is better) Translates to: GHSRLSTNVPAKEVA*GWERIHSPMDFVRT Trigger: AGTCCTAACAAAATCCATTGGACTATGAATCCTTTCCCAGCCCAAAGCCACCTCCTTGGCTGGAACATTAGTGCTTAGTCTGGAATGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR-3UTR TCA 90 bp | AACTGCAAAACTGCCTACAGGACCAAAGAAGTGGCCCTGTCGATTGGCAGTAACTCAGTGAGCTTTTGTTaGAGCTTGGATTTATATAGG | + |
|
Preference number: 2 (lower is better) Translates to: NCKTAYRTKEVALSIGSNSVSFC*SLDLYR Trigger: CCTATATAAATCCAAGCTTCAACAAAAGCTCACTGA...GTTACTGCCAATCGACAGGGCCACTTCTTTGGTCCTGTAGGCAGTTTTGCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR-3UTR CCA 90 bp | ACCATTAAAGTATTAGTCTGTGAGTCAAATTCCATTCCATCACCAGATGAAAAGGGGGTGAGCTCTTCTTaGGGAAGGGTTCCTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: TIKVLVCESNSIPSPDEKGVSSS*GRVPPA Trigger: TGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCC...CTTTTCATCTGGTGATGGAATGGAATTTGACTCACAGACTAATACTTTAATGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCGCTTGCCTTCTTTGAAAATCACTGTGGCGAGTAATGTTCTAGATCACCACCTTTCAGATGTCAGTTaGAATCAACAAGGGAACAAG | + |
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Preference number: 2 (lower is better) Translates to: ARLPSLKITVASNVLDHHLSDVS*NQQGNK Trigger: CTTGTTCCCTTGTTGATTTCAACTGACATCTGAAAG...GTGGTGATCTAGAACATTACTCGCCACAGTGATTTTCAAAGAAGGCAAGCGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| 3UTR-3UTR CAA 90 bp | TTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGGTTGGGGTGAGCTCTTCTaGGGGAAGGGTTCCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: FGVSSSWGRVPPAHRLAGWGELF*GKGSSC Trigger: GCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCA...ACCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
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| 3UTR CCA 72 bp | AAGGTAGACTCCCGTTGCTTTGGGGTGAGCTCTTCTTaGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGGT | + |
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Preference number: 3 (lower is better) Translates to: KVDSRCFGVSSS*GRVPPAHRLAG Trigger: ACCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTCTACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
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| 3UTR-3UTR CAA 90 bp | TGCCCGGCGCAGCTGTCAGAACTGCAAAACTGCCTACAGGACCAAAGAAGTGGCAGCTCTGGAAGGGCCTaGCTGGAATCAGCAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: CPAQLSELQNCLQDQRSGSSGRA*LESADA Trigger: AGCATCTGCTGATTCCAGCAAGGCCCTTCCAGAGCT...GCCACTTCTTTGGTCCTGTAGGCAGTTTTGCAGTTCTGACAGCTGCGCCGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR CCA 72 bp | TCAGAAACCATTAACCAGGCTGAGCCCAGACCTAAGTaGCCTCCAGGCACCCAGGCTTCTGCTCTGGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: SETINQAEPRPK*PPGTQASALAD Trigger: ATCTGCCAGAGCAGAAGCCTGGGTGCCTGGAGGCCACTTAGGTCTGGGCTCAGCCTGGTTAATGGTTTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR CCA 72 bp | GACCTAAGTGGCCTCCAGGCACCCAGGCTTCTGCTCTaGCAGATACAGATTCTGCCAGCAAGAGCAATTCTG | + |
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Preference number: 3 (lower is better) Translates to: DLSGLQAPRLLL*QIQILPARAIL Trigger: CAGAATTGCTCTTGCTGGCAGAATCTGTATCTGCCAGAGCAGAAGCCTGGGTGCCTGGAGGCCACTTAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR TCA 72 bp | GTCCTACAAGCACAGAGAAGGGTGTGGTCTGCATATTaGTGCCCGGCGCAGCTGTCAGAACTGCAAAACTGC | + |
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Preference number: 3 (lower is better) Translates to: VLQAQRRVWSAY*CPAQLSELQNC Trigger: GCAGTTTTGCAGTTCTGACAGCTGCGCCGGGCATCAATATGCAGACCACACCCTTCTCTGTGCTTGTAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR TCA 72 bp | CAGGTGCTACACCGAGACCCACTAACTGAAAACAGCTaGTTCTCACTGCCTCCAGTCCGACCAGGGACTTTC | + |
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Preference number: 3 (lower is better) Translates to: QVLHRDPLTENS*FSLPPVRPGTF Trigger: GAAAGTCCCTGGTCGGACTGGAGGCAGTGAGAATCAGCTGTTTTCAGTTAGTGGGTCTCGGTGTAGCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR-3UTR CAA 90 bp | CTATCACTGGATACAGATACAGTGACTACAGCTCGTCATGCTTTCATCCCAGCCTGGGGTGAGCTCTTCTaGGGGAAGGGTTCCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: LSLDTDTVTTARHAFIPAWGELF*GKGSSC Trigger: GCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCA...GGCTGGGATGAAAGCATGACGAGCTGTAGTCACTGTATCTGTATCCAGTGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR-3UTR CAA 90 bp | TGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGACCCAAAGCCCCTGTAGGCAACATTTaGGCCAGAGGCATGGTAAGA | + |
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Preference number: 3 (lower is better) Translates to: CAGTPIVDLLVSGVGPKAPVGNI*ARGMVR Trigger: TCTTACCATGCCTCTGGCCAAAATGTTGCCTACAGG...GGCTTTGGGTCCAACACCAGAAACAAGAAGATCTACGATGGGGGTGCCCGCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| 3UTR TCA 72 bp | TTGAAACAGCCAGGTGCTACACCGAGACCCACTAACTaGAAACAGCTGATTCTCACTGCCTCCAGTCCGACC | + |
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Preference number: 3 (lower is better) Translates to: LKQPGATPRPTN*KQLILTASSPT Trigger: GGTCGGACTGGAGGCAGTGAGAATCAGCTGTTTTCAGTTAGTGGGTCTCGGTGTAGCACCTGGCTGTTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR CCA 72 bp | AAATCAACAAGGGAACAAGGTAGACTCCCGTTGCTTTaGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: KSTREQGRLPLL*GELFLGKGSSC Trigger: GCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTCTACCTTGTTCCCTTGTTGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
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| 3UTR-3UTR CAA 90 bp | AACTGCAAAACTGCCTACAGGACCAAAGAAGTGGCCCTGTCGATTGGCAGTAACCAAGGTAGACTCCCGTaGCTTTGGGGTGAGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: NCKTAYRTKEVALSIGSNQGRLP*LWGELF Trigger: GAAGAGCTCACCCCAAAGCAACGGGAGTCTACCTTG...GTTACTGCCAATCGACAGGGCCACTTCTTTGGTCCTGTAGGCAGTTTTGCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR-3UTR CAA 90 bp | TCCATTCCATCACCAGATGAAAAGAAAGTCTACGGTAAAAAGCAGAGGGTTGGGTGGGGTGAGCTCTTCTaGGGGAAGGGTTCCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: SIPSPDEKKVYGKKQRVGWGELF*GKGSSC Trigger: GCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCA...CCCAACCCTCTGCTTTTTACCGTAGACTTTCTTTTCATCTGGTGATGGAATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGCACACAGGTTGGCGGGTCTTAGAGCACTACACATAGTCATACTTGGTAGGCCTGTAGGCAACATTTaGGCCAGAGGCATGGTAAGA | + |
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Preference number: 3 (lower is better) Translates to: PAHRLAGLRALHIVILGRPVGNI*ARGMVR Trigger: TCTTACCATGCCTCTGGCCAAAATGTTGCCTACAGG...CCTACCAAGTATGACTATGTGTAGTGCTCTAAGACCCGCCAACCTGTGTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136429.8 |
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| 3UTR TCA 72 bp | GCCTTGACTGTTGGCAAGGGCTTTCTGCTTGCCATGTaGTTAGTGCTCCGGACACCATTTGACCTTCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: ALTVGKGFLLAM*LVLRTPFDLLL Trigger: GAGAAGAAGGTCAAATGGTGTCCGGAGCACTAATCACATGGCAAGCAGAAAGCCCTTGCCAACAGTCAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR CCA 72 bp | CCCTATCTCCATTTCCTGGGAGCATTCAGGCTCACATaGAGATGGAGTTCATGCTTTCTCCTTGAACGGGTC | + |
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Preference number: 3 (lower is better) Translates to: PYLHFLGAFRLT*RWSSCFLLERV Trigger: GACCCGTTCAAGGAGAAAGCATGAACTCCATCTCCATGTGAGCCTGAATGCTCCCAGGAAATGGAGATAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR GCA 72 bp | TTGTTCCAAGAACCTCCCTTCATTACGGCTTCTGAGTaGTCAGAAACCATTAACCAGGCTGAGCCCAGACCT | + |
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Preference number: 3 (lower is better) Translates to: LFQEPPFITASE*SETINQAEPRP Trigger: AGGTCTGGGCTCAGCCTGGTTAATGGTTTCTGAGCACTCAGAAGCCGTAATGAAGGGAGGTTCTTGGAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR GCA 72 bp | ATCACTGGATACAGATACAGTGACTACAGCTCGTCATaGTTTCATCCCAGCCCCAGGTCAGACTCTCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: ITGYRYSDYSSS*FHPSPRSDSLV Trigger: GACAAGAGAGTCTGACCTGGGGCTGGGATGAAAGCATGACGAGCTGTAGTCACTGTATCTGTATCCAGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR CCA 72 bp | GTCAGAACTGCAAAACTGCCTACAGGACCAAAGAAGTaGCCCTGTCGATTGGCAGTAACTGTAGCTATGCCA | + |
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Preference number: 3 (lower is better) Translates to: VRTAKLPTGPKK*PCRLAVTVAMP Trigger: TGGCATAGCTACAGTTACTGCCAATCGACAGGGCCACTTCTTTGGTCCTGTAGGCAGTTTTGCAGTTCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR CCA 72 bp | CAGGTGGGTTTTAGAGAGCACCCTATCTCCATTTCCTaGGAGCATTCAGGCTCACATGGAGATGGAGTTCAT | + |
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Preference number: 3 (lower is better) Translates to: QVGFREHPISIS*EHSGSHGDGVH Trigger: ATGAACTCCATCTCCATGTGAGCCTGAATGCTCCCAGGAAATGGAGATAGGGTGCTCTCTAAAACCCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR TCA 72 bp | TCTGCTTGCCATGTGATTAGTGCTCCGGACACCATTTaGCCTTCTTCTCGGGAAACCGAACAACAGAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: SACHVISAPDTI*PSSRETEQQRR Trigger: TCTTCTCTGTTGTTCGGTTTCCCGAGAAGAAGGTCAAATGGTGTCCGGAGCACTAATCACATGGCAAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR CCA 72 bp | AGCACTAATGTTCCAGCCAAGGAGGTGGCTTTGGGCTaGGAAAGGATTCATAGTCCAATGGATTTTGTTAGG | + |
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Preference number: 3 (lower is better) Translates to: STNVPAKEVALG*ERIHSPMDFVR Trigger: CCTAACAAAATCCATTGGACTATGAATCCTTTCCCAGCCCAAAGCCACCTCCTTGGCTGGAACATTAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR-3UTR CAA 90 bp | TCCCCAGCTTTTTCTATATGTAAGGCTGAAACTAATTCACTGAGATACCAAACCCAAGGTAGACTCCCGTaGCTTTGGGGTGAGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: SPAFSICKAETNSLRYQTQGRLP*LWGELF Trigger: GAAGAGCTCACCCCAAAGCAACGGGAGTCTACCTTG...GGTTTGGTATCTCAGTGAATTAGTTTCAGCCTTACATATAGAAAAAGCTGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| 3UTR-3UTR CAA 90 bp | TCCCCAGCTTTTTCTATATGTAAGGCTGAAACTAATTCACTGAGATACCAAACCAGCTCTGGAAGGGCCTaGCTGGAATCAGCAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: SPAFSICKAETNSLRYQTSSGRA*LESADA Trigger: AGCATCTGCTGATTCCAGCAAGGCCCTTCCAGAGCT...GGTTTGGTATCTCAGTGAATTAGTTTCAGCCTTACATATAGAAAAAGCTGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| 3UTR TCA 72 bp | AACTCATTCCATTTCTATCACTGGATACAGATACAGTaGCTACAGCTCGTCATGCTTTCATCCCAGCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: NSFHFYHWIQIQ*LQLVMLSSQPQ Trigger: CTGGGGCTGGGATGAAAGCATGACGAGCTGTAGTCACTGTATCTGTATCCAGTGATAGAAATGGAATGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| 3UTR GCA 72 bp | TGTACATACTCGGAGCCACCACTGAATATTCATCCCTaGCCCCCAGAGGCCACTTATATATGCACTATTAAT | + |
|
Preference number: 3 (lower is better) Translates to: CTYSEPPLNIHP*PPEATYICTIN Trigger: ATTAATAGTGCATATATAAGTGGCCTCTGGGGGGCAGGGATGAATATTCAGTGGTGGCTCCGAGTATGTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
||
| 3UTR CCA 72 bp | AATGAGGCAAACAGTGTCCTATGGACTCAGTATTTGTaGCACATAACAGTCTGCCTTTTGATTGGGCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: NEANSVLWTQYL*HITVCLLIGHS Trigger: GGAATGCCCAATCAAAAGGCAGACTGTTATGTGCCACAAATACTGAGTCCATAGGACACTGTTTGCCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
||
| 3UTR CCA 72 bp | TCTGGCAGATACAGATTCTGCCAGCAAGAGCAATTCTaGGAAGACGCATGCATCTTTGAAGTAATGAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: SGRYRFCQQEQF*EDACIFEVMKL Trigger: AAGTTTCATTACTTCAAAGATGCATGCGTCTTCCCAGAATTGCTCTTGCTGGCAGAATCTGTATCTGCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCAGCTTTTTCTATATGTAAGGCTGAAACTAATTCACTGAGATACCAAACCAGCGAACAGGCTCGCTaGCCTTCTTTGAAAATCACT | + |
|
Preference number: 3 (lower is better) Translates to: SPAFSICKAETNSLRYQTSEQAR*PSLKIT Trigger: AGTGATTTTCAAAGAAGGCAAGCGAGCCTGTTCGCT...GGTTTGGTATCTCAGTGAATTAGTTTCAGCCTTACATATAGAAAAAGCTGGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| 3UTR TCA 72 bp | ATGAAAATCAGGCTTTACCAACTTTCAGATGTCAGTTaGAATCAACAAGGGAACAAGGTAGACTCCCGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: MKIRLYQLSDVS*NQQGNKVDSRC Trigger: GCAACGGGAGTCTACCTTGTTCCCTTGTTGATTTCAACTGACATCTGAAAGTTGGTAAAGCCTGATTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| 3UTR TCA 72 bp | AAAGAATCTATTTCTTACTCTTCTAGGGGGAATTTCTaGCTTCCGAGAGAAGGAGGACTTCTAGTGGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KESISYSSRGNF*LPREGGLLVES Trigger: GCTTTCCACTAGAAGTCCTCCTTCTCTCGGAAGTCAGAAATTCCCCCTAGAAGAGTAAGAAATAGATTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCAGCTTTTTCTATATGTAAGGCTGAAACTAATTCACTGAGATACCAAACCTTATTATCAGTCAAGTaGGGGGTGGGTAAGGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: SPAFSICKAETNSLRYQTLLSVK*GVGKAQ Trigger: TTGTGCCTTACCCACCCCCAACTTGACTGATAATAA...GGTTTGGTATCTCAGTGAATTAGTTTCAGCCTTACATATAGAAAAAGCTGGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| CDS-3UTR GCA 90 bp | GACTCCCGTTGCTTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACGCACCATGCCACCCATaGCGCCCATGCCGCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: DSRCFGVSSSWGRVPPAHAPCHP*RPCRCT Trigger: TGTACAGCGGCATGGGCGGCATGGGTGGCATGGTGC...GTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGGTCTGGCCACGGCAGGCGATaGACATCATCACTCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGELFLGKGSSCTQVGGSGHGRR*TSSLPQ Trigger: TTGGGGGAGTGATGATGTGCATCGCCTGCCGTGGCC...AGACCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGACCCCTCCCCCAATCAGGGTaGGGCCTCCAGCAACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VFCAGTPIVDLLVSGVGPLPQSG*GLQQPS Trigger: GCTGGGTTGCTGGAGGCCTCACCCTGATTGGGGGAG...GGGTCCAACACCAGAAACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGACTCCCGTTGCTTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACATGTCCATCCCAGTaGCGGCTATGCAGCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRLPLLWGELFLGKGSSCTCPSQ*RLCSRP Trigger: TGGCCGGCTGCATAGCCGCCACTGGGATGGACATGT...GCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGGTCTCAGAGCCCTTCATACTaGAACACGGCGGTGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WGELFLGKGSSCTQVGGSQSPSY*NTAVTG Trigger: CCCAGTCACCGCCGTGTTCCAGTATGAAGGGCTCTG...AGACCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
||
| 3UTR CAA 72 bp | CAAGGTAGACTCCCGTTGCTTTGGGGTGAGCTCTTCTaGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGRLPLLWGELF*GKGSSCTQVGG Trigger: CCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTCTACCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGGTCTACACGAGGATACCGATaGCCCCCAGAACAATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGELFLGKGSSCTQVGGSTRGYR*PPEQCP Trigger: TGGGCATTGTTCTGGGGGTCATCGGTATCCTCGTGT...AGACCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGGTCTAAGGTGTACCTGGTCTaGACGGTCTGCACCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGELFLGKGSSCTQVGGSKVYLV*TVCTMP Trigger: TGGCATGGTGCAGACCGTTCAGACCAGGTACACCTT...AGACCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGACCCAAAGCCGCAACCCCAACAGGGTaGAGTAGCCTCGGCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CAGTPIVDLLVSGVGPKAATPTG*SSLGTR Trigger: CCGAGTGCCGAGGCTACTTCACCCTGTTGGGGTTGC...GGCTTTGGGTCCAACACCAGAAACAAGAAGATCTACGATGGGGGTGCCCGCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131922.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGACCCGAACGGTCTGCACCATaGCACCCATGCCGCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VFCAGTPIVDLLVSGVGPERSAP*HPCRPC Trigger: GCATGGGCGGCATGGGTGGCATGGTGCAGACCGTTC...GGGTCCAACACCAGAAACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR GCA 90 bp | CCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGACCCAAAGCCAGTGCTGGCCTGAACGGTCTGCACCATaGCACCCATGCCGCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PHRRSSCFWCWTQSQCWPERSAP*HPCRPC Trigger: GCATGGGCGGCATGGGTGGCATGGTGCAGACCGTTC...AGGCCAGCACTGGCTTTGGGTCCAACACCAGAAACAAGAAGATCTACGATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR TCA 90 bp | CACATAGTCATACTTGGTAGGATGAGACTGTTCATCGTCTTCTGTGCGGGCACCCTCCCCCAATCAGGGTaGGGCCTCCAGCAACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HIVILGRMRLFIVFCAGTLPQSG*GLQQPS Trigger: GCTGGGTTGCTGGAGGCCTCACCCTGATTGGGGGAG...GGTGCCCGCACAGAAGACGATGAACAGTCTCATCCTACCAAGTATGACTATGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCGGCGCAGCTGTCAGAACTGCAAAACTGCCTACAGGACCAAAGAAGTGGCGCCCACGAACAGAGCTaGACCAAAGGTGTACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CPAQLSELQNCLQDQRSGAHEQS*TKGVPG Trigger: ACCAGGTACACCTTTGGTGCAGCTCTGTTCGTGGGC...GCCACTTCTTTGGTCCTGTAGGCAGTTTTGCAGTTCTGACAGCTGCGCCGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
||
| CDS-3UTR GCA 90 bp | GGCCTTAAAGCCTCCAGGCCTGTAGGCAACATTTTGGCCAGAGGCATGGTAAGAGGCCACGGCAGGCGATaGACATCATCACTCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLKASRPVGNILARGMVRGHGRR*TSSLPQ Trigger: TTGGGGGAGTGATGATGTGCATCGCCTGCCGTGGCC...TCTTACCATGCCTCTGGCCAAAATGTTGCCTACAGGCCTGGAGGCTTTAAGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGACCAAGGTGTACCTGGTCTaGACGGTCTGCACCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLCGHPHRRSSCFWCWTKVYLV*TVCTMP Trigger: TGGCATGGTGCAGACCGTTCAGACCAGGTACACCTT...GGTCCAACACCAGAAACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGACTGTTCATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTAGCCTCGGCACTCGGTaGAGCCAGAGCTCTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: MRLFIVFCAGTPIVDLLVSLGTR*SQSSLG Trigger: TCCGAGAGAGCTCTGGCTTCACCGAGTGCCGAGGCT...AACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATGAACAGTCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131922.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGACTGTTCATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTGCACCATGCCACCCATaGCGCCCATGCCGCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: MRLFIVFCAGTPIVDLLVAPCHP*RPCRCT Trigger: TGTACAGCGGCATGGGCGGCATGGGTGGCATGGTGC...AACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATGAACAGTCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR GCA 90 bp | GTAGATCTTCTTGTTTCTGGTGTTGGACCCAAAGCCAGTGCTGGCCTTAAAGCCGCACCATGCCACCCATaGCGCCCATGCCGCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VDLLVSGVGPKASAGLKAAPCHP*RPCRCT Trigger: TGTACAGCGGCATGGGCGGCATGGGTGGCATGGTGC...GGCTTTAAGGCCAGCACTGGCTTTGGGTCCAACACCAGAAACAAGAAGATCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGACCCAAAGCCAGCTTGCAGCATGGCTaGCAACCCCAACAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CAGTPIVDLLVSGVGPKASLQHG*QPQQGE Trigger: TTCACCCTGTTGGGGTTGCCAGCCATGCTGCAAGCT...GGCTTTGGGTCCAACACCAGAAACAAGAAGATCTACGATGGGGGTGCCCGCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131922.2 |
||
| CDS-3UTR TCA 90 bp | GGTAGACTCCCGTTGCTTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCGGTAAGACACAGCTTTaGAGTTGCTGTCATCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRLPLLWGELFLGKGSSCGKTQL*SCCHLV Trigger: CACCAGATGACAGCAACTTCAAAGCTGTGTCTTACC...GCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| CDS-3UTR TCA 90 bp | GTTCATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGGTGTCGCAAACCCGATCAGTaGCACCACAAACCCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VHRLLCGHPHRRSSCFWCRKPDQ*HHKPQA Trigger: GGCTTGGGGTTTGTGGTGTCACTGATCGGGTTTGCG...ACACCAGAAACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131922.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGGTCTAGACACACCAATGATTaGACAGATGCCGGAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: WGELFLGKGSSCTQVGGSRHTND*TDAGDD Trigger: ATCATCTCCGGCATCTGTGCAATCATTGGTGTGTCT...AGACCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGACCCAAAGCCAGTGCTGGCGCCCACGAACAGAGCTaGACCAAAGGTGTACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPIVDLLVSGVGPKASAGAHEQS*TKGVPG Trigger: ACCAGGTACACCTTTGGTGCAGCTCTGTTCGTGGGC...GCCAGCACTGGCTTTGGGTCCAACACCAGAAACAAGAAGATCTACGATGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | GACTCCCGTTGCTTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACTGGTCACCAGCATGTTaGCAAACACAGACACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSRCFGVSSSWGRVPPAHWSPAC*QTQTHQ Trigger: TTGGTGTGTCTGTGTTTGCCAACATGCTGGTGACCA...GTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGGTTGGTCACCAGCATGTTaGCAAACACAGACACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FGVSSSWGRVPPAHRLAGWSPAC*QTQTHQ Trigger: TTGGTGTGTCTGTGTTTGCCAACATGCTGGTGACCA...ACCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| 3UTR CAA 72 bp | GAAGGAGGACTTCTAGTGGAAAGCTCTGGAAGGGCCTaGCTGGAATCAGCAGATGCTGAGCAGAGCGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: EGGLLVESSGRA*LESADAEQSEQ Trigger: CTGTTCGCTCTGCTCAGCATCTGCTGATTCCAGCAAGGCCCTTCCAGAGCTTTCCACTAGAAGTCCTCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| CDS-3UTR TCA 90 bp | TCCATTCCATCACCAGATGAAAAGAAAGTCTACGGTAAAAAGCAGAGGGTTGGGCTCCCCCAATCAGGGTaGGGCCTCCAGCAACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIPSPDEKKVYGKKQRVGLPQSG*GLQQPS Trigger: GCTGGGTTGCTGGAGGCCTCACCCTGATTGGGGGAG...CCCAACCCTCTGCTTTTTACCGTAGACTTTCTTTTCATCTGGTGATGGAATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGACTCCCGTTGCTTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCAGACACACCAATGATTaGACAGATGCCGGAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRLPLLWGELFLGKGSSCRHTND*TDAGDD Trigger: ATCATCTCCGGCATCTGTGCAATCATTGGTGTGTCT...GCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR GCA 90 bp | GCTCGCTTGCCTTCTTTGAAAATCACTGTGGCGAGTAATGTTCTAGATCACCACGAACGGTCTGCACCATaGCACCCATGCCGCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ARLPSLKITVASNVLDHHERSAP*HPCRPC Trigger: GCATGGGCGGCATGGGTGGCATGGTGCAGACCGTTC...GTGGTGATCTAGAACATTACTCGCCACAGTGATTTTCAAAGAAGGCAAGCGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| CDS-3UTR GCA 90 bp | CATGGCCTCAAAGGGGTGACCTTCCATTTGGACCCCAAGAACCTTAACAATCTTGGCCACGGCAGGCGATaGACATCATCACTCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HGLKGVTFHLDPKNLNNLGHGRR*TSSLPQ Trigger: TTGGGGGAGTGATGATGTGCATCGCCTGCCGTGGCC...AAGATTGTTAAGGTTCTTGGGGTCCAAATGGAAGGTCACCCCTTTGAGGCCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
||
| CDS-3UTR CCA 90 bp | CATGGCCTCAAAGGGGTGACCTTCCATTTGGACCCCAAGAACCTTAACAATCTTACATGTCCATCCCAGTaGCGGCTATGCAGCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HGLKGVTFHLDPKNLNNLTCPSQ*RLCSRP Trigger: TGGCCGGCTGCATAGCCGCCACTGGGATGGACATGT...AAGATTGTTAAGGTTCTTGGGGTCCAAATGGAAGGTCACCCCTTTGAGGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
||
| CDS-3UTR CCA 90 bp | AGACTGTTCATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTCAGAGCCCTTCATACTaGAACACGGCGGTGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLFIVFCAGTPIVDLLVSQSPSY*NTAVTG Trigger: CCCAGTCACCGCCGTGTTCCAGTATGAAGGGCTCTG...AGAAACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATGAACAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCTGGACATCCAGAAGTTaGTCACCAGCATGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLWGELFLGKGSSCTQVGWTSRS*SPACWQ Trigger: TTGCCAACATGCTGGTGACCAACTTCTGGATGTCCA...GCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGATGTCAGTTGAAATCAACAAGGGAACAAGGTAGACTCCCGTTGCTTTGGGCAACCCCAACAGGGTaGAGTAGCCTCGGCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FRCQLKSTREQGRLPLLWATPTG*SSLGTR Trigger: CCGAGTGCCGAGGCTACTTCACCCTGTTGGGGTTGC...CCAAAGCAACGGGAGTCTACCTTGTTCCCTTGTTGATTTCAACTGACATCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112882.9 |
||
| CDS-3UTR GCA 90 bp | CATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGCATACAGGTCTTGAGTaGTCCACATGTCCATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRLLCGHPHRRSSCFWCWHTGLE*STCPSQ Trigger: CTGGGATGGACATGTGGAGCACTCAAGACCTGTATG...CCAACACCAGAAACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136429.8 |
||
| CDS-3UTR GCA 90 bp | TCCATTCCATCACCAGATGAAAAGAAAGTCTACGGTAAAAAGCAGAGGGTTGGGGCACCATGCCACCCATaGCGCCCATGCCGCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SIPSPDEKKVYGKKQRVGAPCHP*RPCRCT Trigger: TGTACAGCGGCATGGGCGGCATGGGTGGCATGGTGC...CCCAACCCTCTGCTTTTTACCGTAGACTTTCTTTTCATCTGGTGATGGAATGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR GCA 90 bp | AGACTGTTCATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGCCCACGAACAGAGCTaGACCAAAGGTGTACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLFIVFCAGTPIVDLLVSAHEQS*TKGVPG Trigger: ACCAGGTACACCTTTGGTGCAGCTCTGTTCGTGGGC...AGAAACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATGAACAGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTAAAGCCTCCAGGCCTGTAGGCAACATTTTGGCCAGAGGCATGGTAAGAGAGTCATCTTGGCCTTaGCAGAGTCATCCATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GLKASRPVGNILARGMVRESSWP*QSHPCY Trigger: GTAGCATGGATGACTCTGCCAAGGCCAAGATGACTC...TCTTACCATGCCTCTGGCCAAAATGTTGCCTACAGGCCTGGAGGCTTTAAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR GCA 90 bp | CGCTTGCCTTCTTTGAAAATCACTGTGGCGAGTAATGTTCTAGATCACCACATAGAACGGTCTGCACCATaGCACCCATGCCGCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RLPSLKITVASNVLDHHIERSAP*HPCRPC Trigger: GCATGGGCGGCATGGGTGGCATGGTGCAGACCGTTC...TATGTGGTGATCTAGAACATTACTCGCCACAGTGATTTTCAAAGAAGGCAAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| 3UTR CAA 72 bp | CAGTTGAAATCAACAAGGGAACAAGGTAGACTCCCGTaGCTTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLKSTREQGRLP*LWGELFLGKGS Trigger: GGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTCTACCTTGTTCCCTTGTTGATTTCAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGCTTTTTCTATATGTAAGGCTGAAACTAATTCACTGAGATACCAAACCCTCCCCCAATCAGGGTaGGGCCTCCAGCAACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPAFSICKAETNSLRYQTLPQSG*GLQQPS Trigger: GCTGGGTTGCTGGAGGCCTCACCCTGATTGGGGGAG...GGTTTGGTATCTCAGTGAATTAGTTTCAGCCTTACATATAGAAAAAGCTGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| CDS-3UTR TCA 90 bp | TCCATTCCATCACCAGATGAAAAGAAAGTCTACGGTAAAAAGCAGAGGGTTGGGCGCAAACCCGATCAGTaGCACCACAAACCCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SIPSPDEKKVYGKKQRVGRKPDQ*HHKPQA Trigger: GGCTTGGGGTTTGTGGTGTCACTGATCGGGTTTGCG...CCCAACCCTCTGCTTTTTACCGTAGACTTTCTTTTCATCTGGTGATGGAATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112882.9 |
||
| CDS-3UTR GCA 90 bp | CATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGTGTATAAATCCTGGGTaGTCCACTGGTCCATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRLLCGHPHRRSSCFWCWCINPG*STGPYK Trigger: CTTGTATGGACCAGTGGAGCACCCAGGATTTATACA...CCAACACCAGAAACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131922.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGTCAGTTGAAATCAACAAGGGAACAAGGTAGACTCCCGTTGCTTTGGGTACAGCTTGCAGCATaGCTGGAAGGCCCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: FRCQLKSTREQGRLPLLWVQLAA*LEGPGW Trigger: CCATCCTGGGCCTTCCAGCCATGCTGCAAGCTGTAC...CCAAAGCAACGGGAGTCTACCTTGTTCCCTTGTTGATTTCAACTGACATCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | AGACTGTTCATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGAGTCATCTTGGCCTTaGCAGAGTCATCCATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RLFIVFCAGTPIVDLLVSESSWP*QSHPCY Trigger: GTAGCATGGATGACTCTGCCAAGGCCAAGATGACTC...AGAAACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATGAACAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGAGACTGTTCATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTTGGTCACCAGCATGTTaGCAAACACAGACACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RMRLFIVFCAGTPIVDLLWSPAC*QTQTHQ Trigger: TTGGTGTGTCTGTGTTTGCCAACATGCTGGTGACCA...AAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATGAACAGTCTCATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGAGACTGTTCATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTTGGACATCCAGAAGTTaGTCACCAGCATGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RMRLFIVFCAGTPIVDLLWTSRS*SPACWQ Trigger: TTGCCAACATGCTGGTGACCAACTTCTGGATGTCCA...AAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATGAACAGTCTCATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | AACTGCAAAACTGCCTACAGGACCAAAGAAGTGGCCCTGTCGATTGGCAGTAACTCTTGTTTCTGGTGTTaGACCCAAAGCCAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NCKTAYRTKEVALSIGSNSCFWC*TQSQCW Trigger: CCAGCACTGGCTTTGGGTCCAACACCAGAAACAAGA...GTTACTGCCAATCGACAGGGCCACTTCTTTGGTCCTGTAGGCAGTTTTGCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
||
| CDS-3UTR TCA 90 bp | TTCAGATGTCAGTTGAAATCAACAAGGGAACAAGGTAGACTCCCGTTGCTTTGGACTGGAACACGGCGGTaGCTGGGTTGTCATACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FRCQLKSTREQGRLPLLWTGTRR*LGCHTG Trigger: ACCTGTATGACAACCCAGTCACCGCCGTGTTCCAGT...CCAAAGCAACGGGAGTCTACCTTGTTCCCTTGTTGATTTCAACTGACATCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGATGTCAGTTGAAATCAACAAGGGAACAAGGTAGACTCCCGTTGCTTTGGAAGGTGTACCTGGTCTaGACGGTCTGCACCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FRCQLKSTREQGRLPLLWKVYLV*TVCTMP Trigger: TGGCATGGTGCAGACCGTTCAGACCAGGTACACCTT...CCAAAGCAACGGGAGTCTACCTTGTTCCCTTGTTGATTTCAACTGACATCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGACTGTTCATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTGGACATCCAGAAGTTaGTCACCAGCATGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MRLFIVFCAGTPIVDLLVWTSRS*SPACWQ Trigger: TTGCCAACATGCTGGTGACCAACTTCTGGATGTCCA...AACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATGAACAGTCTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGACCCAAAGCCAGTGCTGGCTTGTTGTATAAATCCTaGGTGCTCCACTGGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TPIVDLLVSGVGPKASAGLLYKS*VLHWSI Trigger: TATGGACCAGTGGAGCACCCAGGATTTATACAACAA...GCCAGCACTGGCTTTGGGTCCAACACCAGAAACAAGAAGATCTACGATGGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131922.2 |
||
| 3UTR CAA 72 bp | GAATCAGCAGATGCTGAGCAGAGCGAACAGGCTCGCTaGCCTTCTTTGAAAATCACTGTGGCGAGTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESADAEQSEQAR*PSLKITVASNV Trigger: AACATTACTCGCCACAGTGATTTTCAAAGAAGGCAAGCGAGCCTGTTCGCTCTGCTCAGCATCTGCTGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| CDS-3UTR TCA 90 bp | TTCCTGGGTCCTTATTATCCACATGTTATAAATAAGGGAACGGAGATTCAGGGCACACGAGGATACCGATaGCCCCCAGAACAATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLGPYYPHVINKGTEIQGTRGYR*PPEQCP Trigger: TGGGCATTGTTCTGGGGGTCATCGGTATCCTCGTGT...GCCCTGAATCTCCGTTCCCTTATTTATAACATGTGGATAATAAGGACCCAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
||
| CDS-3UTR TCA 90 bp | AATCTATTTCTTACTCTTCTAGGGGGAATTTCTGACTTCCGAGAGAAGGAGGACAAGGTGTACCTGGTCTaGACGGTCTGCACCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLFLTLLGGISDFREKEDKVYLV*TVCTMP Trigger: TGGCATGGTGCAGACCGTTCAGACCAGGTACACCTT...GTCCTCCTTCTCTCGGAAGTCAGAAATTCCCCCTAGAAGAGTAAGAAATAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| CDS-3UTR GCA 90 bp | GTAGATCTTCTTGTTTCTGGTGTTGGACCCAAAGCCAGTGCTGGCCTTAAAGCCAGACACACCAATGATTaGACAGATGCCGGAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VDLLVSGVGPKASAGLKARHTND*TDAGDD Trigger: ATCATCTCCGGCATCTGTGCAATCATTGGTGTGTCT...GGCTTTAAGGCCAGCACTGGCTTTGGGTCCAACACCAGAAACAAGAAGATCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTCAGATGTCAGTTGAAATCAACAAGGGAACAAGGTAGACTCCCGTTGCTTGCCCACGAACAGAGCTaGACCAAAGGTGTACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TFRCQLKSTREQGRLPLLAHEQS*TKGVPG Trigger: ACCAGGTACACCTTTGGTGCAGCTCTGTTCGTGGGC...AAGCAACGGGAGTCTACCTTGTTCCCTTGTTGATTTCAACTGACATCTGAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCTATGGATGAAAATCAGGCTTTACCAACTTTCAGATGTCAGTTGAAATCAGGCCACGGCAGGCGATaGACATCATCACTCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPMDENQALPTFRCQLKSGHGRR*TSSLPQ Trigger: TTGGGGGAGTGATGATGTGCATCGCCTGCCGTGGCC...TGATTTCAACTGACATCTGAAAGTTGGTAAAGCCTGATTTTCATCCATAGGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | AATCTATTTCTTACTCTTCTAGGGGGAATTTCTGACTTCCGAGAGAAGGAGGACAGCTTGCAGCATGGCTaGCAACCCCAACAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLFLTLLGGISDFREKEDSLQHG*QPQQGE Trigger: TTCACCCTGTTGGGGTTGCCAGCCATGCTGCAAGCT...GTCCTCCTTCTCTCGGAAGTCAGAAATTCCCCCTAGAAGAGTAAGAAATAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112882.9 |
||
| CDS-3UTR TCA 90 bp | GCTCGCTTGCCTTCTTTGAAAATCACTGTGGCGAGTAATGTTCTAGATCACCACGGTAAGACACAGCTTTaGAGTTGCTGTCATCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARLPSLKITVASNVLDHHGKTQL*SCCHLV Trigger: CACCAGATGACAGCAACTTCAAAGCTGTGTCTTACC...GTGGTGATCTAGAACATTACTCGCCACAGTGATTTTCAAAGAAGGCAAGCGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| CDS-3UTR TCA 90 bp | ACCATTAAAGTATTAGTCTGTGAGTCAAATTCCATTCCATCACCAGATGAAAAGAGCCTCGGCACTCGGTaGAGCCAGAGCTCTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TIKVLVCESNSIPSPDEKSLGTR*SQSSLG Trigger: TCCGAGAGAGCTCTGGCTTCACCGAGTGCCGAGGCT...CTTTTCATCTGGTGATGGAATGGAATTTGACTCACAGACTAATACTTTAATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112882.9 |
||
| CDS-3UTR CCA 90 bp | TCCATTCCATCACCAGATGAAAAGAAAGTCTACGGTAAAAAGCAGAGGGTTGGGTCTTGTTTCTGGTGTTaGACCCAAAGCCAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIPSPDEKKVYGKKQRVGSCFWC*TQSQCW Trigger: CCAGCACTGGCTTTGGGTCCAACACCAGAAACAAGA...CCCAACCCTCTGCTTTTTACCGTAGACTTTCTTTTCATCTGGTGATGGAATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGCTTTTTCTATATGTAAGGCTGAAACTAATTCACTGAGATACCAAACCACTGGAACACGGCGGTaGCTGGGTTGTCATACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPAFSICKAETNSLRYQTTGTRR*LGCHTG Trigger: ACCTGTATGACAACCCAGTCACCGCCGTGTTCCAGT...GGTTTGGTATCTCAGTGAATTAGTTTCAGCCTTACATATAGAAAAAGCTGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
||
| CDS-3UTR CCA 90 bp | TGTCTAGCCTCCCTATGGATGAAAATCAGGCTTTACCAACTTTCAGATGTCAGTGAGTCATCTTGGCCTTaGCAGAGTCATCCATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: CLASLWMKIRLYQLSDVSESSWP*QSHPCY Trigger: GTAGCATGGATGACTCTGCCAAGGCCAAGATGACTC...ACTGACATCTGAAAGTTGGTAAAGCCTGATTTTCATCCATAGGGAGGCTAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | TCCATTCCATCACCAGATGAAAAGAAAGTCTACGGTAAAAAGCAGAGGGTTGGGTGGTCACCAGCATGTTaGCAAACACAGACACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIPSPDEKKVYGKKQRVGWSPAC*QTQTHQ Trigger: TTGGTGTGTCTGTGTTTGCCAACATGCTGGTGACCA...CCCAACCCTCTGCTTTTTACCGTAGACTTTCTTTTCATCTGGTGATGGAATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTCAGATGTCAGTTGAAATCAACAAGGGAACAAGGTAGACTCCCGTTGCTTTTGTCATACAGGTCTTaGGTGCTCCACATGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TFRCQLKSTREQGRLPLLLSYRS*VLHMSI Trigger: GATGGACATGTGGAGCACTCAAGACCTGTATGACAA...AAGCAACGGGAGTCTACCTTGTTCCCTTGTTGATTTCAACTGACATCTGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | CGCTTGCCTTCTTTGAAAATCACTGTGGCGAGTAATGTTCTAGATCACCACATATGGACATCCAGAAGTTaGTCACCAGCATGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLPSLKITVASNVLDHHIWTSRS*SPACWQ Trigger: TTGCCAACATGCTGGTGACCAACTTCTGGATGTCCA...TATGTGGTGATCTAGAACATTACTCGCCACAGTGATTTTCAAAGAAGGCAAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
||
| CDS-3UTR CCA 90 bp | GCTCGCTTGCCTTCTTTGAAAATCACTGTGGCGAGTAATGTTCTAGATCACCACTTGTTGTATAAATCCTaGGTGCTCCACTGGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: ARLPSLKITVASNVLDHHLLYKS*VLHWSI Trigger: TATGGACCAGTGGAGCACCCAGGATTTATACAACAA...GTGGTGATCTAGAACATTACTCGCCACAGTGATTTTCAAAGAAGGCAAGCGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112882.9 |
||
| CDS-3UTR GCA 90 bp | CTCCCTATGGATGAAAATCAGGCTTTACCAACTTTCAGATGTCAGTTGAAATCACATACAGGTCTTGAGTaGTCCACATGTCCATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPMDENQALPTFRCQLKSHTGLE*STCPSQ Trigger: CTGGGATGGACATGTGGAGCACTCAAGACCTGTATG...TGATTTCAACTGACATCTGAAAGTTGGTAAAGCCTGATTTTCATCCATAGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCTATGGATGAAAATCAGGCTTTACCAACTTTCAGATGTCAGTTGAAATCAGAGTCATCTTGGCCTTaGCAGAGTCATCCATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPMDENQALPTFRCQLKSESSWP*QSHPCY Trigger: GTAGCATGGATGACTCTGCCAAGGCCAAGATGACTC...TGATTTCAACTGACATCTGAAAGTTGGTAAAGCCTGATTTTCATCCATAGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
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| 3UTR CAA 72 bp | AGAAATGAGGCAAACAGTGTCCTATGGACTCAGTATTaGTGGCACATAACAGTCTGCCTTTTGATTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RNEANSVLWTQY*WHITVCLLIGH Trigger: ATGCCCAATCAAAAGGCAGACTGTTATGTGCCACAAATACTGAGTCCATAGGACACTGTTTGCCTCATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
||
| CDS-3UTR GCA 90 bp | TCCCCAGCTTTTTCTATATGTAAGGCTGAAACTAATTCACTGAGATACCAAACCTGTATAAATCCTGGGTaGTCCACTGGTCCATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPAFSICKAETNSLRYQTCINPG*STGPYK Trigger: CTTGTATGGACCAGTGGAGCACCCAGGATTTATACA...GGTTTGGTATCTCAGTGAATTAGTTTCAGCCTTACATATAGAAAAAGCTGGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112882.9 |
||
| CDS TCA 90 bp | TCAGGCCACGGCAGGCGATGCACATCATCACTCCCCCAATCAGGGTaGGGCCTCCAGCAACCCAGCCCACGAACAGAGCTGCACCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGHGRRCTSSLPQSG*GLQQPSPRTELHQR Trigger: CCTTTGGTGCAGCTCTGTTCGTGGGCTGGGTTGCTGGAGGCCTCACCCTGATTGGGGGAGTGATGATGTGCATCGCCTGCCGTGGCCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGGTCTCAGGGCTCGTACAGCTaGCAGCATGGCTGGCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: WGELFLGKGSSCTQVGGSQGSYS*QHGWQP Trigger: GGGTTGCCAGCCATGCTGCAAGCTGTACGAGCCCTG...AGACCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112882.9 |
||
| CDS-3UTR CAA 90 bp | CCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGACCCAAAGCCAGTGCTGGCCTCAGGGCTCGTACAGCTaGCAGCATGGCTGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PHRRSSCFWCWTQSQCWPQGSYS*QHGWKA Trigger: GGCCTTCCAGCCATGCTGCAAGCTGTACGAGCCCTG...AGGCCAGCACTGGCTTTGGGTCCAACACCAGAAACAAGAAGATCTACGATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136429.8 |
||
| CDS-3UTR CAA 90 bp | GACTCCCGTTGCTTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACGTGGACATCCAGAAGTaGGTCACCAGCATGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DSRCFGVSSSWGRVPPAHVDIQK*VTSMLA Trigger: TGCCAACATGCTGGTGACCAACTTCTGGATGTCCAC...GTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000136429.8 |
||
| CDS TCA 90 bp | GTTGCACGCAACTCCTCCAGAGCCCTTCATACTGGAACACGGCGGTaGCTGGGTTGTCATACAGGTCTTGAGTGCTCCACATGTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VARNSSRALHTGTRR*LGCHTGLECSTCPS Trigger: GGATGGACATGTGGAGCACTCAAGACCTGTATGACAACCCAGTCACCGCCGTGTTCCAGTATGAAGGGCTCTGGAGGAGTTGCGTGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
||
| CDS CCA 90 bp | CACGCAACTCCTCCAGAGCCCTTCATACTGGAACACGGCGGTGACTaGGTTGTCATACAGGTCTTGAGTGCTCCACATGTCCATCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HATPPEPFILEHGGD*VVIQVLSAPHVHPS Trigger: ACTGGGATGGACATGTGGAGCACTCAAGACCTGTATGACAACCCAGTCACCGCCGTGTTCCAGTATGAAGGGCTCTGGAGGAGTTGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGGTCTGTTGTCATACAGGTCTaGAGTGCTCCACATGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WGELFLGKGSSCTQVGGSVVIQV*SAPHVH Trigger: ATGGACATGTGGAGCACTCAAGACCTGTATGACAAC...AGACCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGGGTCCTGTAGGCAACATTTaGGCCAGAGGCATGGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FGVSSSWGRVPPAHRLAGPVGNI*ARGMVR Trigger: TCTTACCATGCCTCTGGCCAAAATGTTGCCTACAGG...ACCCGCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| CDS-3UTR CAA 90 bp | GGTAGACTCCCGTTGCTTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCTTCTTGTTTCTGGTGTaGGACCCAAAGCCAGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GRLPLLWGELFLGKGSSCFLFLV*DPKPVL Trigger: CAGCACTGGCTTTGGGTCCAACACCAGAAACAAGAA...GCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAACGGGAGTCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| CDS-3UTR CAA 90 bp | TGTGCGGGCACCCCCATCGTAGATCTTCTTGTTTCTGGTGTTGGACCCAAAGCCGCGGTCACCGGGTTGTaGTATAAATCCTGGGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: CAGTPIVDLLVSGVGPKAAVTGL*YKSWVL Trigger: GAGCACCCAGGATTTATACAACAACCCGGTGACCGC...GGCTTTGGGTCCAACACCAGAAACAAGAAGATCTACGATGGGGGTGCCCGCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131922.2 |
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| CDS-3UTR CAA 90 bp | ATGAGACTGTTCATCGTCTTCTGTGCGGGCACCCCCATCGTAGATCTTCTTGTTCAGGGCTCGTACAGCTaGCAGCATGGCTGGCAACCC | + |
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Preference number: 5 (lower is better) Translates to: MRLFIVFCAGTPIVDLLVQGSYS*QHGWQP Trigger: GGGTTGCCAGCCATGCTGCAAGCTGTACGAGCCCTG...AACAAGAAGATCTACGATGGGGGTGCCCGCACAGAAGACGATGAACAGTCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131922.2 |
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| CDS TCA 90 bp | CAATGCGAATGCACTTCAGGGCGAAGATGGACACGAGGATACCGATaGCCCCCAGAACAATGCCCACGATCATCAGGGCTCGTACAGCTT | + |
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Preference number: 5 (lower is better) Translates to: QCECTSGRRWTRGYR*PPEQCPRSSGLVQL Trigger: AAGCTGTACGAGCCCTGATGATCGTGGGCATTGTTCTGGGGGTCATCGGTATCCTCGTGTCCATCTTCGCCCTGAAGTGCATTCGCATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| CDS CCA 90 bp | TTGGCCAGAGGCATGGTAAGACACAGCTTTGAAGTTGCTGTCATCTaGTGTCAGGCCACGGCAGGCGATGCACATCATCACTCCCCCAAT | + |
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Preference number: 5 (lower is better) Translates to: LARGMVRHSFEVAVI*CQATAGDAHHHSPN Trigger: ATTGGGGGAGTGATGATGTGCATCGCCTGCCGTGGCCTGACACCAGATGACAGCAACTTCAAAGCTGTGTCTTACCATGCCTCTGGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| CDS TCA 90 bp | TGTATAAATCCTGGGTGCTCCACTGGTCCATACAAGTGGCTGCAATaGTGCCCGCAAACCCGATCAGTGACACCACAAACCCCAAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: CINPGCSTGPYKWLQ*CPQTRSVTPQTPSP Trigger: AGGGCTTGGGGTTTGTGGTGTCACTGATCGGGTTTGCGGGCATCATTGCAGCCACTTGTATGGACCAGTGGAGCACCCAGGATTTATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112882.9 ENSMUST00000131922.2 |
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| CDS-3UTR CAA 90 bp | TTGCTTTGGGGTGAGCTCTTCTTGGGGAAGGGTTCCTCCTGCACACAGGTTGGCGTTGTCATACAGGTCTaGAGTGCTCCACATGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LLWGELFLGKGSSCTQVGVVIQV*SAPHVH Trigger: ATGGACATGTGGAGCACTCAAGACCTGTATGACAAC...GCCAACCTGTGTGCAGGAGGAACCCTTCCCCAAGAAGAGCTCACCCCAAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
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| CDS GCA 90 bp | AGATCCCAGAAGTCAGAGTCATCTTGGCCTTGGCAGAGTCATCCATaGTACCAATGCGAATGCACTTCAGGGCGAAGATGGACACGAGGA | + |
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Preference number: 5 (lower is better) Translates to: RSQKSESSWPWQSHP*YQCECTSGRRWTRG Trigger: TCCTCGTGTCCATCTTCGCCCTGAAGTGCATTCGCATTGGTAGCATGGATGACTCTGCCAAGGCCAAGATGACTCTGACTTCTGGGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| CDS-3UTR CAA 90 bp | TTCCTGGGTCCTTATTATCCACATGTTATAAATAAGGGAACGGAGATTCAGGGCCAGGGCTCGTACAGCTaGCAGCATGGCTGGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: FLGPYYPHVINKGTEIQGQGSYS*QHGWKA Trigger: GGCCTTCCAGCCATGCTGCAAGCTGTACGAGCCCTG...GCCCTGAATCTCCGTTCCCTTATTTATAACATGTGGATAATAAGGACCCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035048.12 |
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| CDS GCA 90 bp | GAAGTTGGTCACCAGCATGTTGGCAAACACAGACACACCAATGATTaGACAGATGCCGGAGATGATGAACAAGATCCCAGAAGTCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: EVGHQHVGKHRHTND*TDAGDDEQDPRSQS Trigger: ACTCTGACTTCTGGGATCTTGTTCATCATCTCCGGCATCTGTGCAATCATTGGTGTGTCTGTGTTTGCCAACATGCTGGTGACCAACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| CDS-3UTR CAA 90 bp | CGCTTGCCTTCTTTGAAAATCACTGTGGCGAGTAATGTTCTAGATCACCACATACCTGTAGGCAACATTTaGGCCAGAGGCATGGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLPSLKITVASNVLDHHIPVGNI*ARGMVR Trigger: TCTTACCATGCCTCTGGCCAAAATGTTGCCTACAGG...TATGTGGTGATCTAGAACATTACTCGCCACAGTGATTTTCAAAGAAGGCAAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| CDS-3UTR CAA 90 bp | TGTCTAGCCTCCCTATGGATGAAAATCAGGCTTTACCAACTTTCAGATGTCAGTTTCTTGTTTCTGGTGTaGGACCCAAAGCCAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLASLWMKIRLYQLSDVSFLFLV*DPKPVL Trigger: CAGCACTGGCTTTGGGTCCAACACCAGAAACAAGAA...ACTGACATCTGAAAGTTGGTAAAGCCTGATTTTCATCCATAGGGAGGCTAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| CDS-3UTR CAA 90 bp | CTCCCTATGGATGAAAATCAGGCTTTACCAACTTTCAGATGTCAGTTGAAATCAGCGGTCACCGGGTTGTaGTATAAATCCTGGGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: LPMDENQALPTFRCQLKSAVTGL*YKSWVL Trigger: GAGCACCCAGGATTTATACAACAACCCGGTGACCGC...TGATTTCAACTGACATCTGAAAGTTGGTAAAGCCTGATTTTCATCCATAGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112882.9 |
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| CDS CAA 90 bp | CCCTTCATACTGGAACACGGCGGTGACTGGGTTGTCATACAGGTCTaGAGTGCTCCACATGTCCATCCCAGTGGCGGCTATGCAGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: PFILEHGGDWVVIQV*SAPHVHPSGGYAAG Trigger: GCCGGCTGCATAGCCGCCACTGGGATGGACATGTGGAGCACTCAAGACCTGTATGACAACCCAGTCACCGCCGTGTTCCAGTATGAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
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| CDS TCA 72 bp | TGCACTTCAGGGCGAAGATGGACACGAGGATACCGATaGCCCCCAGAACAATGCCCACGATCATCAGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CTSGRRWTRGYR*PPEQCPRSSGL Trigger: GAGCCCTGATGATCGTGGGCATTGTTCTGGGGGTCATCGGTATCCTCGTGTCCATCTTCGCCCTGAAGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| CDS TCA 72 bp | CCTGGGTGCTCCACTGGTCCATACAAGTGGCTGCAATaGTGCCCGCAAACCCGATCAGTGACACCACAAACC | + |
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Preference number: 6 (lower is better) Translates to: PGCSTGPYKWLQ*CPQTRSVTPQT Trigger: GGTTTGTGGTGTCACTGATCGGGTTTGCGGGCATCATTGCAGCCACTTGTATGGACCAGTGGAGCACCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112882.9 ENSMUST00000131922.2 |
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| CDS CAA 72 bp | CTGGAACACGGCGGTGACTGGGTTGTCATACAGGTCTaGAGTGCTCCACATGTCCATCCCAGTGGCGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: LEHGGDWVVIQV*SAPHVHPSGGY Trigger: ATAGCCGCCACTGGGATGGACATGTGGAGCACTCAAGACCTGTATGACAACCCAGTCACCGCCGTGTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
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| CDS CCA 72 bp | CTCTGTTGCACGCAACTCCTCCAGAGCCCTTCATACTaGAACACGGCGGTGACTGGGTTGTCATACAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LCCTQLLQSPSY*NTAVTGLSYRS Trigger: AGACCTGTATGACAACCCAGTCACCGCCGTGTTCCAGTATGAAGGGCTCTGGAGGAGTTGCGTGCAACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
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| CDS TCA 72 bp | AACTCCTCCAGAGCCCTTCATACTGGAACACGGCGGTaGCTGGGTTGTCATACAGGTCTTGAGTGCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: NSSRALHTGTRR*LGCHTGLECST Trigger: TGTGGAGCACTCAAGACCTGTATGACAACCCAGTCACCGCCGTGTTCCAGTATGAAGGGCTCTGGAGGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000136429.8 |
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| CDS GCA 72 bp | TGGCCTTGGCAGAGTCATCCATGCTACCAATGCGAATaGACTTCAGGGCGAAGATGGACACGAGGATACCGA | + |
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Preference number: 6 (lower is better) Translates to: WPWQSHPCYQCE*TSGRRWTRGYR Trigger: TCGGTATCCTCGTGTCCATCTTCGCCCTGAAGTGCATTCGCATTGGTAGCATGGATGACTCTGCCAAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| CDS CCA 72 bp | GGCATGGTAAGACACAGCTTTGAAGTTGCTGTCATCTaGTGTCAGGCCACGGCAGGCGATGCACATCATCAC | + |
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Preference number: 6 (lower is better) Translates to: GMVRHSFEVAVI*CQATAGDAHHH Trigger: GTGATGATGTGCATCGCCTGCCGTGGCCTGACACCAGATGACAGCAACTTCAAAGCTGTGTCTTACCATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| CDS GCA 72 bp | TCATCTTGGCCTTGGCAGAGTCATCCATGCTACCAATaGGAATGCACTTCAGGGCGAAGATGGACACGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSWPWQSHPCYQ*ECTSGRRWTRG Trigger: TCCTCGTGTCCATCTTCGCCCTGAAGTGCATTCGCATTGGTAGCATGGATGACTCTGCCAAGGCCAAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| CDS CAA 90 bp | CCGGAGATGATGAACAAGATCCCAGAAGTCAGAGTCATCTTGGCCTaGGCAGAGTCATCCATGCTACCAATGCGAATGCACTTCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PEMMNKIPEVRVILA*AESSMLPMRMHFRA Trigger: CGCCCTGAAGTGCATTCGCATTGGTAGCATGGATGACTCTGCCAAGGCCAAGATGACTCTGACTTCTGGGATCTTGTTCATCATCTCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| CDS CAA 90 bp | ATGCCGCCCATGCCGCTGTACATGTTAGCTGTGGACATCCAGAAGTaGGTCACCAGCATGTTGGCAAACACAGACACACCAATGATTGCA | + |
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Preference number: 6 (lower is better) Translates to: MPPMPLYMLAVDIQK*VTSMLANTDTPMIA Trigger: TGCAATCATTGGTGTGTCTGTGTTTGCCAACATGCTGGTGACCAACTTCTGGATGTCCACAGCTAACATGTACAGCGGCATGGGCGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| CDS CAA 90 bp | AAAGCCAGTGCTGGCCTTAAAGCCTCCAGGCCTGTAGGCAACATTTaGGCCAGAGGCATGGTAAGACACAGCTTTGAAGTTGCTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: KASAGLKASRPVGNI*ARGMVRHSFEVAVI Trigger: GATGACAGCAACTTCAAAGCTGTGTCTTACCATGCCTCTGGCCAAAATGTTGCCTACAGGCCTGGAGGCTTTAAGGCCAGCACTGGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| CDS GCA 72 bp | AAGTCAGAGTCATCTTGGCCTTGGCAGAGTCATCCATaGTACCAATGCGAATGCACTTCAGGGCGAAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: KSESSWPWQSHP*YQCECTSGRRW Trigger: CCATCTTCGCCCTGAAGTGCATTCGCATTGGTAGCATGGATGACTCTGCCAAGGCCAAGATGACTCTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| CDS CAA 72 bp | GCTGGCCTTAAAGCCTCCAGGCCTGTAGGCAACATTTaGGCCAGAGGCATGGTAAGACACAGCTTTGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: AGLKASRPVGNI*ARGMVRHSFEV Trigger: AACTTCAAAGCTGTGTCTTACCATGCCTCTGGCCAAAATGTTGCCTACAGGCCTGGAGGCTTTAAGGCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 |
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| CDS CAA 90 bp | CAGATGCCGGAGATGATGAACAAGATCCCAGAAGTCAGAGTCATCTaGGCCTTGGCAGAGTCATCCATGCTACCAATGCGAATGCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: QMPEMMNKIPEVRVI*ALAESSMLPMRMHF Trigger: GAAGTGCATTCGCATTGGTAGCATGGATGACTCTGCCAAGGCCAAGATGACTCTGACTTCTGGGATCTTGTTCATCATCTCCGGCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| CDS TCA 72 bp | TCTCTCGGACGCATGAACGCCATAGCCCTTGGTAGTTaGATACAGCGGTCACCGGGTTGTTGTATAAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLGRMNAIALGS*IQRSPGCCINP Trigger: AGGATTTATACAACAACCCGGTGACCGCTGTATTCAACTACCAAGGGCTATGGCGTTCATGCGTCCGAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112882.9 ENSMUST00000131922.2 |
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| CDS CCA 72 bp | TTGAATACAGCGGTCACCGGGTTGTTGTATAAATCCTaGGTGCTCCACTGGTCCATACAAGTGGCTGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LNTAVTGLLYKS*VLHWSIQVAAM Trigger: CATTGCAGCCACTTGTATGGACCAGTGGAGCACCCAGGATTTATACAACAACCCGGTGACCGCTGTATTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112882.9 ENSMUST00000131922.2 |
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| CDS CAA 72 bp | ATGCCGCTGTACATGTTAGCTGTGGACATCCAGAAGTaGGTCACCAGCATGTTGGCAAACACAGACACACCA | + |
|
Preference number: 6 (lower is better) Translates to: MPLYMLAVDIQK*VTSMLANTDTP Trigger: TGGTGTGTCTGTGTTTGCCAACATGCTGGTGACCAACTTCTGGATGTCCACAGCTAACATGTACAGCGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| CDS GCA 72 bp | CACCAGCATGTTGGCAAACACAGACACACCAATGATTaGACAGATGCCGGAGATGATGAACAAGATCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HQHVGKHRHTND*TDAGDDEQDPR Trigger: TCTGGGATCTTGTTCATCATCTCCGGCATCTGTGCAATCATTGGTGTGTCTGTGTTTGCCAACATGCTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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| CDS CAA 72 bp | ATGAACAAGATCCCAGAAGTCAGAGTCATCTTGGCCTaGGCAGAGTCATCCATGCTACCAATGCGAATGCAC | + |
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Preference number: 6 (lower is better) Translates to: MNKIPEVRVILA*AESSMLPMRMH Trigger: GTGCATTCGCATTGGTAGCATGGATGACTCTGCCAAGGCCAAGATGACTCTGACTTCTGGGATCTTGTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035048.12 ENSMUST00000112882.9 ENSMUST00000131922.2 ENSMUST00000136429.8 |
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