Pregenerated sensors for CLDN15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001739Ensembl transcript IDs: ENSMUST00000001790.6, ENSMUST00000111093.8
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGTCCTGAGGTTATTAACTGGAGACTGGTCTGCCTGCAGGTCCTaGAGACAGTGGGACAAGAAATGGTGTCCAGCAGGCCAGAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: PVLRLLTGDWSACRS*RQWDKKWCPAGQSF Trigger: GAAGCTCTGGCCTGCTGGACACCATTTCTTGTCCCACTGTCTCCAGGACCTGCAGGCAGACCAGTCTCCAGTTAATAACCTCAGGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR CCA 90 bp | CACAGGGTGAGGCCAGGAAATTTGGCCTGTCCTGAGGTTATTAACTaGAGACTGGTCTGCCTGCAGGTCCTGGAGACAGTGGGACAAGAA | + |
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Preference number: 1 (lower is better) Translates to: HRVRPGNLACPEVIN*RLVCLQVLETVGQE Trigger: TTCTTGTCCCACTGTCTCCAGGACCTGCAGGCAGACCAGTCTCCAGTTAATAACCTCAGGACAGGCCAAATTTCCTGGCCTCACCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR GCA 90 bp | CCAGGAAATTTGGCCTGTCCTGAGGTTATTAACTGGAGACTGGTCTaGCTGCAGGTCCTGGAGACAGTGGGACAAGAAATGGTGTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: PGNLACPEVINWRLV*LQVLETVGQEMVSS Trigger: GCTGGACACCATTTCTTGTCCCACTGTCTCCAGGACCTGCAGGCAGACCAGTCTCCAGTTAATAACCTCAGGACAGGCCAAATTTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR CCA 90 bp | GCCATTTACACAGGTTCTGGGGATTTGAACTCAGGTCCTCATACTTaGGTAGCAAACACTCAACTCACTGAGCCATCTCCCCAGCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: AIYTGSGDLNSGPHT*VANTQLTEPSPQLP Trigger: AGGGAGCTGGGGAGATGGCTCAGTGAGTTGAGTGTTTGCTACCCAAGTATGAGGACCTGAGTTCAAATCCCCAGAACCTGTGTAAATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR GCA 90 bp | TACCTCAACCTAGCATACTTGGGTTGCAGGATTGTATCCATGGCCTaGCATTTACACAGGTTCTGGGGATTTGAACTCAGGTCCTCATAC | + |
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Preference number: 1 (lower is better) Translates to: YLNLAYLGCRIVSMA*HLHRFWGFELRSSY Trigger: GTATGAGGACCTGAGTTCAAATCCCCAGAACCTGTGTAAATGGCAGGCCATGGATACAATCCTGCAACCCAAGTATGCTAGGTTGAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR TCA 90 bp | ACACATGCACCTACCAATGCCTGTTCTAGATCAACTGCCCCTGTGTaGGACTGTGAGAAAATAGGTCAAGAGTCAACAGAGAGGAACTTT | + |
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Preference number: 1 (lower is better) Translates to: THAPTNACSRSTAPV*DCEKIGQESTERNF Trigger: AAAGTTCCTCTCTGTTGACTCTTGACCTATTTTCTCACAGTCTCACACAGGGGCAGTTGATCTAGAACAGGCATTGGTAGGTGCATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR TCA 90 bp | CGCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGGTTCCAGGGAGAGGCTaGGTGCCAGATAAGGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: RAPPHSLKTASHMEPGARVPGRG*VPDKVC Trigger: GCACACCTTATCTGGCACTCAGCCTCTCCCTGGAAC...CCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGGTGGGAGACTGGTCTGCCTaGAGGTCCTGGAGACAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: APPHSLKTASHMEPGARVGDWSA*RSWRQW Trigger: CCACTGTCTCCAGGACCTGCAGGCAGACCAGTCTCC...CACCCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR TCA 90 bp | CATACTTGGGTAGCAAACACTCAACTCACTGAGCCATCTCCCCAGCTCCCTGACGTGGCTGTGACTCCATaGCCCCTGGTGCCCCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: HTWVANTQLTEPSPQLPDVAVTP*PLVPPE Trigger: TTCAGGGGGCACCAGGGGTCATGGAGTCACAGCCAC...GTCAGGGAGCTGGGGAGATGGCTCAGTGAGTTGAGTGTTTGCTACCCAAGTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR GCA 90 bp | CGCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGCTCCATGACCCCTGGTaGCCCCTGAACAATCACAAT | + |
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Preference number: 2 (lower is better) Translates to: RAPPHSLKTASHMEPGARLHDPW*PLNNHN Trigger: ATTGTGATTGTTCAGGGGGCACCAGGGGTCATGGAG...CCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR TCA 90 bp | CGCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGATCTCCCCAGCTCCCTaGCACACTATCTCACTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: RAPPHSLKTASHMEPGARISPAP*HTISLD Trigger: ATCTAGTGAGATAGTGTGTCAGGGAGCTGGGGAGAT...CCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGGTGTATGGAGTCACATGCTaGAGACACCTCTGTCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: APPHSLKTASHMEPGARVYGVTC*RHLCPL Trigger: AAGGGGACAGAGGTGTCTGCAGCATGTGACTCCATA...CACCCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTCCAGCTGTAAGAAGCAGGCAAGTTGCCCCTGAAGCTTCTGTTCCAGGGCAGTGGGACAAGAAATaGTGTCCAGCAGGCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LCPAVRSRQVAPEASVPGQWDKK*CPAGQS Trigger: GCTCTGGCCTGCTGGACACCATTTCTTGTCCCACTG...CCCTGGAACAGAAGCTTCAGGGGCAACTTGCCTGCTTCTTACAGCTGGACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR TCA 90 bp | AATAGGTCAAGAGTCAACAGAGAGGAACTTTCAGCAGGCCAGGAGCATCACAGCGTTCCAGGGAGAGGCTaGGTGCCAGATAAGGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: NRSRVNREELSAGQEHHSVPGRG*VPDKVC Trigger: GCACACCTTATCTGGCACTCAGCCTCTCCCTGGAAC...GCTGTGATGCTCCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR GCA 90 bp | GAGACAGCCCCCAAATTGGGCAGACTTGACAGTCTGTGGTTTGAAAAGGACTCCAACTGGAGACTGGTCTaGCTGCAGGTCCTGGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: ETAPKLGRLDSLWFEKDSNWRLV*LQVLET Trigger: TGTCTCCAGGACCTGCAGGCAGACCAGTCTCCAGTT...GGAGTCCTTTTCAAACCACAGACTGTCAAGTCTGCCCAATTTGGGGGCTGTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTGTCCAGCTGTAAGAAGCAGGCAAGTTGCCCCTGAAGCTTCTGTTCCAGGGGTGCCAGATAAGGTGTaGCTAGAGTGGGTAGTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LCPAVRSRQVAPEASVPGVPDKV*LEWVVA Trigger: AGCCACTACCCACTCTAGGCACACCTTATCTGGCAC...CCCTGGAACAGAAGCTTCAGGGGCAACTTGCCTGCTTCTTACAGCTGGACACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CCA 90 bp | AATAGGTCAAGAGTCAACAGAGAGGAACTTTCAGCAGGCCAGGAGCATCACAGCGTCTCATATGGAGCCTaGAGCCAGGGTGGAAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: NRSRVNREELSAGQEHHSVSYGA*SQGGSQ Trigger: CTGGCTTCCACCCTGGCTCCAGGCTCCATATGAGAC...GCTGTGATGCTCCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATTGTATCCATGGCCTGCCATTTACACAGGTTCTGGGGATTTGAACTCAGGCTTCCAGGCACAGGGTaGGGCCAGGAAATTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RIVSMACHLHRFWGFELRLPGTG*GQEIWP Trigger: AGGCCAAATTTCCTGGCCTCACCCTGTGCCTGGAAG...CCTGAGTTCAAATCCCCAGAACCTGTGTAAATGGCAGGCCATGGATACAATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTATATGGAGTCACATGCTGCAGACACCTCTGTCCCCTTGTGTCCAGCTGTACTTCCAGGCACAGGGTaGGGCCAGGAAATTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: IYMESHAADTSVPLCPAVLPGTG*GQEIWP Trigger: AGGCCAAATTTCCTGGCCTCACCCTGTGCCTGGAAG...TACAGCTGGACACAAGGGGACAGAGGTGTCTGCAGCATGTGACTCCATATAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGTGGGTGACTCAGATCAGTTGTTAGTGACTCCCCCTTTCAAATCCTTTTGTGGAGACTGGTCTGCCTaGAGGTCCTGGAGACAGTGG | + |
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Preference number: 2 (lower is better) Translates to: EVGDSDQLLVTPPFKSFCGDWSA*RSWRQW Trigger: CCACTGTCTCCAGGACCTGCAGGCAGACCAGTCTCC...ACAAAAGGATTTGAAAGGGGGAGTCACTAACAACTGATCTGAGTCACCCACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CCA 90 bp | CATACTTGGGTAGCAAACACTCAACTCACTGAGCCATCTCCCCAGCTCCCTGACAGGTCCTGGAGACAGTaGGACAAGAAATGGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: HTWVANTQLTEPSPQLPDRSWRQ*DKKWCP Trigger: TGGACACCATTTCTTGTCCCACTGTCTCCAGGACCT...GTCAGGGAGCTGGGGAGATGGCTCAGTGAGTTGAGTGTTTGCTACCCAAGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CCA 90 bp | ATCGCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGCAGGATTGTATCCATaGCCTGCCATTTACACAGGT | + |
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Preference number: 2 (lower is better) Translates to: IALHLIPLRLRLIWSLEPAGLYP*PAIYTG Trigger: ACCTGTGTAAATGGCAGGCCATGGATACAATCCTGC...TGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR CAA 90 bp | GCACACATTTATATGGAGTCACATGCTGCAGACACCTCTGTCCCCTaGTGTCCAGCTGTAAGAAGCAGGCAAGTTGCCCCTGAAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: AHIYMESHAADTSVP*CPAVRSRQVAPEAS Trigger: AGAAGCTTCAGGGGCAACTTGCCTGCTTCTTACAGCTGGACACAAGGGGACAGAGGTGTCTGCAGCATGTGACTCCATATAAATGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATTGTATCCATGGCCTGCCATTTACACAGGTTCTGGGGATTTGAACTCAGGAAACACTCAACTCACTaGGCCATCTCCCCAGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RIVSMACHLHRFWGFELRKHSTH*AISPAP Trigger: GGGAGCTGGGGAGATGGCTCAGTGAGTTGAGTGTTT...CCTGAGTTCAAATCCCCAGAACCTGTGTAAATGGCAGGCCATGGATACAATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR TCA 90 bp | AATAGGTCAAGAGTCAACAGAGAGGAACTTTCAGCAGGCCAGGAGCATCACAGCATCTCCCCAGCTCCCTaGCACACTATCTCACTAGAT | + |
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Preference number: 2 (lower is better) Translates to: NRSRVNREELSAGQEHHSISPAP*HTISLD Trigger: ATCTAGTGAGATAGTGTGTCAGGGAGCTGGGGAGAT...GCTGTGATGCTCCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR GCA 90 bp | TTACACAGGTTCTGGGGATTTGAACTCAGGTCCTCATACTTGGGTAGCAAACACAACTGGAGACTGGTCTaGCTGCAGGTCCTGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: LHRFWGFELRSSYLGSKHNWRLV*LQVLET Trigger: TGTCTCCAGGACCTGCAGGCAGACCAGTCTCCAGTT...GTGTTTGCTACCCAAGTATGAGGACCTGAGTTCAAATCCCCAGAACCTGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAAATAGGTCAAGAGTCAACAGAGAGGAACTTTCAGCAGGCCAGGAGCATCTCTGCCTGCAGGTCCTaGAGACAGTGGGACAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: EKIGQESTERNFQQARSISACRS*RQWDKK Trigger: TTTCTTGTCCCACTGTCTCCAGGACCTGCAGGCAGA...GATGCTCCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATTGTATCCATGGCCTGCCATTTACACAGGTTCTGGGGATTTGAACTCAGGCACTATCTCACTAGATaGGACAGCCCCCAAATTGGG | + |
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Preference number: 2 (lower is better) Translates to: RIVSMACHLHRFWGFELRHYLTR*DSPQIG Trigger: CCCAATTTGGGGGCTGTCTCATCTAGTGAGATAGTG...CCTGAGTTCAAATCCCCAGAACCTGTGTAAATGGCAGGCCATGGATACAATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CCA 90 bp | GACTTGACAGTCTGTGGTTTGAAAAGGACTCCCTTATGTGGCTGTGACTCCATGAGGTCCTGGAGACAGTaGGACAAGAAATGGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: DLTVCGLKRTPLCGCDSMRSWRQ*DKKWCP Trigger: TGGACACCATTTCTTGTCCCACTGTCTCCAGGACCT...CATGGAGTCACAGCCACATAAGGGAGTCCTTTTCAAACCACAGACTGTCAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CCA 90 bp | GACTGTGAGAAAATAGGTCAAGAGTCAACAGAGAGGAACTTTCAGCAGGCCAGGTTATTAACTGGAGACTaGTCTGCCTGCAGGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: DCEKIGQESTERNFQQARLLTGD*SACRSW Trigger: CCAGGACCTGCAGGCAGACCAGTCTCCAGTTAATAA...CCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATTTTCTCACAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CCA 90 bp | CATACTTGGGTAGCAAACACTCAACTCACTGAGCCATCTCCCCAGCTCCCTGACAGACTTGACAGTCTGTaGTTTGAAAAGGACTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: HTWVANTQLTEPSPQLPDRLDSL*FEKDSL Trigger: AAGGGAGTCCTTTTCAAACCACAGACTGTCAAGTCT...GTCAGGGAGCTGGGGAGATGGCTCAGTGAGTTGAGTGTTTGCTACCCAAGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR CAA 90 bp | GCAGGATTGTATCCATGGCCTGCCATTTACACAGGTTCTGGGGATTaGAACTCAGGTCCTCATACTTGGGTAGCAAACACTCAACTCACT | + |
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Preference number: 2 (lower is better) Translates to: AGLYPWPAIYTGSGD*NSGPHTWVANTQLT Trigger: AGTGAGTTGAGTGTTTGCTACCCAAGTATGAGGACCTGAGTTCAAATCCCCAGAACCTGTGTAAATGGCAGGCCATGGATACAATCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAAATAGGTCAAGAGTCAACAGAGAGGAACTTTCAGCAGGCCAGGAGCATCCATTTACACAGGTTCTaGGGATTTGAACTCAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: EKIGQESTERNFQQARSIHLHRF*GFELRS Trigger: GGACCTGAGTTCAAATCCCCAGAACCTGTGTAAATG...GATGCTCCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGGTGACTCAGATCAGTTGTTAGTGACTCCCCCTTTCAAATCCTTTTGTGCAGGATTGTATCCATaGCCTGCCATTTACACAGGT | + |
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Preference number: 2 (lower is better) Translates to: EVGDSDQLLVTPPFKSFCAGLYP*PAIYTG Trigger: ACCTGTGTAAATGGCAGGCCATGGATACAATCCTGC...ACAAAAGGATTTGAAAGGGGGAGTCACTAACAACTGATCTGAGTCACCCACCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CCA 90 bp | TTACACAGGTTCTGGGGATTTGAACTCAGGTCCTCATACTTGGGTAGCAAACACAGACTTGACAGTCTGTaGTTTGAAAAGGACTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LHRFWGFELRSSYLGSKHRLDSL*FEKDSL Trigger: AAGGGAGTCCTTTTCAAACCACAGACTGTCAAGTCT...GTGTTTGCTACCCAAGTATGAGGACCTGAGTTCAAATCCCCAGAACCTGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR GCA 90 bp | AATAGGTCAAGAGTCAACAGAGAGGAACTTTCAGCAGGCCAGGAGCATCACAGCTTTGTTGAGAATGTGTaGATGTGTGTAGTCTATGTA | + |
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Preference number: 2 (lower is better) Translates to: NRSRVNREELSAGQEHHSFVENV*MCVVYV Trigger: TACATAGACTACACACATGCACACATTCTCAACAAA...GCTGTGATGCTCCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGGTGACTCAGATCAGTTGTTAGTGACTCCCCCTTTCAAATCCTTTTGTATGCACACATTTATATaGAGTCACATGCTGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: EVGDSDQLLVTPPFKSFCMHTFI*SHMLQT Trigger: TGTCTGCAGCATGTGACTCCATATAAATGTGTGCAT...ACAAAAGGATTTGAAAGGGGGAGTCACTAACAACTGATCTGAGTCACCCACCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR CCA 72 bp | GCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATaGAGCCTGGAGCCAGGGTGGAAGCCAGGAAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: ALHLIPLRLRLI*SLEPGWKPGSL Trigger: GAGGCTTCCTGGCTTCCACCCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CAA 90 bp | GCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGGTGGACACCTCTGTCCCCTaGTGTCCAGCTGTAAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: APPHSLKTASHMEPGARVDTSVP*CPAVRS Trigger: GCTTCTTACAGCTGGACACAAGGGGACAGAGGTGTC...CACCCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CAA 90 bp | ATCGCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCACCTAGCATACTTGGGTaGCAGGATTGTATCCATGGC | + |
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Preference number: 3 (lower is better) Translates to: IALHLIPLRLRLIWSLEPPSILG*QDCIHG Trigger: GCCATGGATACAATCCTGCAACCCAAGTATGCTAGG...TGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR GCA 72 bp | CCTGTCCTGAGGTTATTAACTGGAGACTGGTCTGCCTaGAGGTCCTGGAGACAGTGGGACAAGAAATGGTGT | + |
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Preference number: 3 (lower is better) Translates to: PVLRLLTGDWSA*RSWRQWDKKWC Trigger: ACACCATTTCTTGTCCCACTGTCTCCAGGACCTGCAGGCAGACCAGTCTCCAGTTAATAACCTCAGGACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR GCA 72 bp | TTGGCCTGTCCTGAGGTTATTAACTGGAGACTGGTCTaGCTGCAGGTCCTGGAGACAGTGGGACAAGAAATG | + |
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Preference number: 3 (lower is better) Translates to: LACPEVINWRLV*LQVLETVGQEM Trigger: CATTTCTTGTCCCACTGTCTCCAGGACCTGCAGGCAGACCAGTCTCCAGTTAATAACCTCAGGACAGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR CCA 72 bp | GAAATTTGGCCTGTCCTGAGGTTATTAACTGGAGACTaGTCTGCCTGCAGGTCCTGGAGACAGTGGGACAAG | + |
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Preference number: 3 (lower is better) Translates to: EIWPVLRLLTGD*SACRSWRQWDK Trigger: CTTGTCCCACTGTCTCCAGGACCTGCAGGCAGACCAGTCTCCAGTTAATAACCTCAGGACAGGCCAAATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR-3UTR CAA 90 bp | CATACTTGGGTAGCAAACACTCAACTCACTGAGCCATCTCCCCAGCTCCCTGACCCAAATTGGGCAGACTaGACAGTCTGTGGTTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: HTWVANTQLTEPSPQLPDPNWAD*TVCGLK Trigger: TTTCAAACCACAGACTGTCAAGTCTGCCCAATTTGG...GTCAGGGAGCTGGGGAGATGGCTCAGTGAGTTGAGTGTTTGCTACCCAAGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| 3UTR CCA 72 bp | ACAGGTTCTGGGGATTTGAACTCAGGTCCTCATACTTaGGTAGCAAACACTCAACTCACTGAGCCATCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TGSGDLNSGPHT*VANTQLTEPSP Trigger: GGGAGATGGCTCAGTGAGTTGAGTGTTTGCTACCCAAGTATGAGGACCTGAGTTCAAATCCCCAGAACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| 3UTR GCA 72 bp | CTAGCATACTTGGGTTGCAGGATTGTATCCATGGCCTaGCATTTACACAGGTTCTGGGGATTTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LAYLGCRIVSMA*HLHRFWGFELR Trigger: CCTGAGTTCAAATCCCCAGAACCTGTGTAAATGGCAGGCCATGGATACAATCCTGCAACCCAAGTATGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| 3UTR CCA 72 bp | AGGATTGTATCCATGGCCTGCCATTTACACAGGTTCTaGGGATTTGAACTCAGGTCCTCATACTTGGGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: RIVSMACHLHRF*GFELRSSYLGS Trigger: GCTACCCAAGTATGAGGACCTGAGTTCAAATCCCCAGAACCTGTGTAAATGGCAGGCCATGGATACAATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| 3UTR TCA 72 bp | CCTACCAATGCCTGTTCTAGATCAACTGCCCCTGTGTaGGACTGTGAGAAAATAGGTCAAGAGTCAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PTNACSRSTAPV*DCEKIGQESTE Trigger: CTCTGTTGACTCTTGACCTATTTTCTCACAGTCTCACACAGGGGCAGTTGATCTAGAACAGGCATTGGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| 3UTR TCA 72 bp | TTATGTGGCTGTGACTCCATGACCCCTGGTGCCCCCTaGACAATCACAATATACATTTATTCATGCACACAT | + |
|
Preference number: 3 (lower is better) Translates to: LCGCDSMTPGAP*TITIYIYSCTH Trigger: ATGTGTGCATGAATAAATGTATATTGTGATTGTTCAGGGGGCACCAGGGGTCATGGAGTCACAGCCACATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR TCA 90 bp | CGCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGGTCCCAGGGCTGACATaGAGAAGCCGAAGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAPPHSLKTASHMEPGARVPGLT*RSRRSP Trigger: TGGAGACCTTCGGCTTCTTCATGTCAGCCCTGGGAC...CCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR GCA 90 bp | CGCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGTATGTGGAGGGTCCCTaGAATGGCCAGCAGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAPPHSLKTASHMEPGARYVEGP*NGQQLG Trigger: GCCAAGCTGCTGGCCATTGCAGGGACCCTCCACATA...CCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | CTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGGTGGCTCCCAGGGAGTCGGTaGCACAGCTGTACCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHLIPLRLRLIWSLEPGWLPGSR*HSCTTG Trigger: ACCTGTGGTACAGCTGTGCCACCGACTCCCTGGGAG...CCACCCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | CGCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGTGGCTGGTTCCTCCTTaGAGGAACAGCAGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAPPHSLKTASHMEPGARWLVPP*RNSSRW Trigger: CCACCTGCTGCTGTTCCTCCAAGGAGGAACCAGCCA...CCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGGTCCTGGAGACAGTGGGACAAGAAATGGTGTCCAGCAGGCCAGAGCTTCCCAGCCCTGGTGGCTaGTTCCTCCTTGGAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LQVLETVGQEMVSSRPELPSPGG*FLLGGT Trigger: TGTTCCTCCAAGGAGGAACCAGCCACCAGGGCTGGG...AAGCTCTGGCCTGCTGGACACCATTTCTTGTCCCACTGTCTCCAGGACCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGGTGCAGCAGTCCCAGGGCTaGCATGAAGAAGCCGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: APPHSLKTASHMEPGARVQQSQG*HEEAEG Trigger: ACCTTCGGCTTCTTCATGTCAGCCCTGGGACTGCTG...CACCCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | ATCGCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGAAAGTCCCAGCAGTTaGAGACTCCCAGGGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: IALHLIPLRLRLIWSLEPESPSS*RLPGSR Trigger: CCGACTCCCTGGGAGTCTCCAACTGCTGGGACTTTC...TGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | CGCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGCAATGGCCAGCAGCTTaGCCTTCTTGGAGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAPPHSLKTASHMEPGARQWPAA*PSWRDP Trigger: TGGATCTCTCCAAGAAGGCCAAGCTGCTGGCCATTG...CCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCTGAGGTTATTAACTGGAGACTGGTCTGCCTGCAGGTCCTGGAGACAGTGGGAGGGTCCCTGCAATaGCCAGCAGCTTGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPEVINWRLVCLQVLETVGGSLQ*PAAWPS Trigger: AGAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCC...CACTGTCTCCAGGACCTGCAGGCAGACCAGTCTCCAGTTAATAACCTCAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGTCCAGCTGTAAGAAGCAGGCAAGTTGCCCCTGAAGCTTCTGTTCCAGGGGGAGGGTCCCTGCAATaGCCAGCAGCTTGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCPAVRSRQVAPEASVPGGGSLQ*PAAWPS Trigger: AGAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCC...CCCTGGAACAGAAGCTTCAGGGGCAACTTGCCTGCTTCTTACAGCTGGACACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | GAGACAGCCCCCAAATTGGGCAGACTTGACAGTCTGTGGTTTGAAAAGGACTCCAGATGCCGCCCAGGATaGAGAGCAGGGAGGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETAPKLGRLDSLWFEKDSRCRPG*RAGRHS Trigger: GGAGTGCCTCCCTGCTCTCCATCCTGGGCGGCATCT...GGAGTCCTTTTCAAACCACAGACTGTCAAGTCTGCCCAATTTGGGGGCTGTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | GAGACAGCCCCCAAATTGGGCAGACTTGACAGTCTGTGGTTTGAAAAGGACTCCAGGGAAGCCCAGCCCTaGTGGCTGGTTCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETAPKLGRLDSLWFEKDSREAQP*WLVPPW Trigger: CCAAGGAGGAACCAGCCACCAGGGCTGGGCTTCCCT...GGAGTCCTTTTCAAACCACAGACTGTCAAGTCTGCCCAATTTGGGGGCTGTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGTCCAGCTGTAAGAAGCAGGCAAGTTGCCCCTGAAGCTTCTGTTCCAGGGCAGCAGTCCCAGGGCTaGCATGAAGAAGCCGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCPAVRSRQVAPEASVPGQQSQG*HEEAEG Trigger: ACCTTCGGCTTCTTCATGTCAGCCCTGGGACTGCTG...CCCTGGAACAGAAGCTTCAGGGGCAACTTGCCTGCTTCTTACAGCTGGACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTGAGGCCAGGAAATTTGGCCTGTCCTGAGGTTATTAACTGGAGACTGGTCCTCCCAGGGAGTCGGTaGCACAGCTGTACCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVRPGNLACPEVINWRLVLPGSR*HSCTTG Trigger: ACCTGTGGTACAGCTGTGCCACCGACTCCCTGGGAG...GACCAGTCTCCAGTTAATAACCTCAGGACAGGCCAAATTTCCTGGCCTCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | AATAGGTCAAGAGTCAACAGAGAGGAACTTTCAGCAGGCCAGGAGCATCACAGCAGATGCCGCCCAGGATaGAGAGCAGGGAGGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRSRVNREELSAGQEHHSRCRPG*RAGRHS Trigger: GGAGTGCCTCCCTGCTCTCCATCCTGGGCGGCATCT...GCTGTGATGCTCCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | ACATGCTGCAGACACCTCTGTCCCCTTGTGTCCAGCTGTAAGAAGCAGGCAAGTTGGCTGGTTCCTCCTTaGAGGAACAGCAGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TCCRHLCPLVSSCKKQASWLVPP*RNSSRW Trigger: CCACCTGCTGCTGTTCCTCCAAGGAGGAACCAGCCA...ACTTGCCTGCTTCTTACAGCTGGACACAAGGGGACAGAGGTGTCTGCAGCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | ACATGCTGCAGACACCTCTGTCCCCTTGTGTCCAGCTGTAAGAAGCAGGCAAGTAGGAACAGCAGCAGGTaGAGAAGACACAGATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TCCRHLCPLVSSCKKQASRNSSR*RRHRCR Trigger: GCGGCATCTGTGTCTTCTCCACCTGCTGCTGTTCCT...ACTTGCCTGCTTCTTACAGCTGGACACAAGGGGACAGAGGTGTCTGCAGCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | AGGATTGTATCCATGGCCTGCCATTTACACAGGTTCTGGGGATTTGAACTCAGGAGGGAAGCCCAGCCCTaGTGGCTGGTTCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIVSMACHLHRFWGFELRREAQP*WLVPPW Trigger: CCAAGGAGGAACCAGCCACCAGGGCTGGGCTTCCCT...CCTGAGTTCAAATCCCCAGAACCTGTGTAAATGGCAGGCCATGGATACAATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| 3UTR CAA 72 bp | TATATGGAGTCACATGCTGCAGACACCTCTGTCCCCTaGTGTCCAGCTGTAAGAAGCAGGCAAGTTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YMESHAADTSVP*CPAVRSRQVAP Trigger: AGGGGCAACTTGCCTGCTTCTTACAGCTGGACACAAGGGGACAGAGGTGTCTGCAGCATGTGACTCCATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR GCA 90 bp | GACTTGACAGTCTGTGGTTTGAAAAGGACTCCCTTATGTGGCTGTGACTCCATGTATGTGGAGGGTCCCTaGAATGGCCAGCAGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLTVCGLKRTPLCGCDSMYVEGP*NGQQLG Trigger: GCCAAGCTGCTGGCCATTGCAGGGACCCTCCACATA...CATGGAGTCACAGCCACATAAGGGAGTCCTTTTCAAACCACAGACTGTCAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | GACTTGACAGTCTGTGGTTTGAAAAGGACTCCCTTATGTGGCTGTGACTCCATGGAAAGTCCCAGCAGTTaGAGACTCCCAGGGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DLTVCGLKRTPLCGCDSMESPSS*RLPGSR Trigger: CCGACTCCCTGGGAGTCTCCAACTGCTGGGACTTTC...CATGGAGTCACAGCCACATAAGGGAGTCCTTTTCAAACCACAGACTGTCAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | AATAGGTCAAGAGTCAACAGAGAGGAACTTTCAGCAGGCCAGGAGCATCACAGCAGGAACAGCAGCAGGTaGAGAAGACACAGATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NRSRVNREELSAGQEHHSRNSSR*RRHRCR Trigger: GCGGCATCTGTGTCTTCTCCACCTGCTGCTGTTCCT...GCTGTGATGCTCCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR TCA 90 bp | TTACACAGGTTCTGGGGATTTGAACTCAGGTCCTCATACTTGGGTAGCAAACACGTCCCAGGGCTGACATaGAGAAGCCGAAGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHRFWGFELRSSYLGSKHVPGLT*RSRRSP Trigger: TGGAGACCTTCGGCTTCTTCATGTCAGCCCTGGGAC...GTGTTTGCTACCCAAGTATGAGGACCTGAGTTCAAATCCCCAGAACCTGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | TTACACAGGTTCTGGGGATTTGAACTCAGGTCCTCATACTTGGGTAGCAAACACCAGAGAGGGCCAGCATaGACGGAAAGTCCCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHRFWGFELRSSYLGSKHQRGPA*TESPSS Trigger: ACTGCTGGGACTTTCCGTCCATGCTGGCCCTCTCTG...GTGTTTGCTACCCAAGTATGAGGACCTGAGTTCAAATCCCCAGAACCTGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| 3UTR CAA 72 bp | CAGCCCCCAAATTGGGCAGACTTGACAGTCTGTGGTTaGAAAAGGACTCCCTTATGTGGCTGTGACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QPPNWADLTVCG*KRTPLCGCDSM Trigger: CATGGAGTCACAGCCACATAAGGGAGTCCTTTTCAAACCACAGACTGTCAAGTCTGCCCAATTTGGGGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | GACTTGACAGTCTGTGGTTTGAAAAGGACTCCCTTATGTGGCTGTGACTCCATGGCAGCTTGGCCTTCTTaGAGAGATCCATGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLTVCGLKRTPLCGCDSMAAWPS*RDPCCP Trigger: TGGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGC...CATGGAGTCACAGCCACATAAGGGAGTCCTTTTCAAACCACAGACTGTCAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | AGGATTGTATCCATGGCCTGCCATTTACACAGGTTCTGGGGATTTGAACTCAGGGCAGCTTGGCCTTCTTaGAGAGATCCATGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RIVSMACHLHRFWGFELRAAWPS*RDPCCP Trigger: TGGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGC...CCTGAGTTCAAATCCCCAGAACCTGTGTAAATGGCAGGCCATGGATACAATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAAATAGGTCAAGAGTCAACAGAGAGGAACTTTCAGCAGGCCAGGAGCATCTCTCCAGTAGCTGTTTaGAAGGGTCAACCCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EKIGQESTERNFQQARSISPVAV*KGQPQH Trigger: ATGCTGGGGTTGACCCTTTCAAACAGCTACTGGAGA...GATGCTCCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGGTGACTCAGATCAGTTGTTAGTGACTCCCCCTTTCAAATCCTTTTGTCAATGGCCAGCAGCTTaGCCTTCTTGGAGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVGDSDQLLVTPPFKSFCQWPAA*PSWRDP Trigger: TGGATCTCTCCAAGAAGGCCAAGCTGCTGGCCATTG...ACAAAAGGATTTGAAAGGGGGAGTCACTAACAACTGATCTGAGTCACCCACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| 3UTR CAA 72 bp | TATCCATGGCCTGCCATTTACACAGGTTCTGGGGATTaGAACTCAGGTCCTCATACTTGGGTAGCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: YPWPAIYTGSGD*NSGPHTWVANT Trigger: AGTGTTTGCTACCCAAGTATGAGGACCTGAGTTCAAATCCCCAGAACCTGTGTAAATGGCAGGCCATGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS CCA 90 bp | GCCCAGCCCTGGTGGCTGGTTCCTCCTTGGAGGAACAGCAGCAGGTaGAGAAGACACAGATGCCGCCCAGGATGGAGAGCAGGGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AQPWWLVPPWRNSSR*RRHRCRPGWRAGRH Trigger: GTGCCTCCCTGCTCTCCATCCTGGGCGGCATCTGTGTCTTCTCCACCTGCTGCTGTTCCTCCAAGGAGGAACCAGCCACCAGGGCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS CCA 90 bp | TGGCCAGCAGCTTGGCCTTCTTGGAGAGATCCATGTTGCCCACGTTaGTGCAGCGGAGTCCCACCATGCCTAGAAAGAGGCCCAGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: WPAAWPSWRDPCCPR*CSGVPPCLERGPGS Trigger: GCTTCCTGGGCCTCTTTCTAGGCATGGTGGGACTCCGCTGCACCAACGTGGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGCTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS CCA 90 bp | CAAGTATGTGGAGGGTCCCTGCAATGGCCAGCAGCTTGGCCTTCTTaGAGAGATCCATGTTGCCCACGTTGGTGCAGCGGAGTCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QVCGGSLQWPAAWPS*RDPCCPRWCSGVPP Trigger: TGGTGGGACTCCGCTGCACCAACGTGGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCCACATACTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS CCA 90 bp | AGGCTCCAGCAAGTATGTGGAGGGTCCCTGCAATGGCCAGCAGCTTaGCCTTCTTGGAGAGATCCATGTTGCCCACGTTGGTGCAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLQQVCGGSLQWPAA*PSWRDPCCPRWCSG Trigger: TCCGCTGCACCAACGTGGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCCACATACTTGCTGGAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS CCA 90 bp | GCGTACCACGAGATAGCCACCATCCCACAGGCTCCAGCAAGTATGTaGAGGGTCCCTGCAATGGCCAGCAGCTTGGCCTTCTTGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AYHEIATIPQAPASM*RVPAMASSLAFLER Trigger: TCTCTCCAAGAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCCACATACTTGCTGGAGCCTGTGGGATGGTGGCTATCTCGTGGTACGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CAA 90 bp | CTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGGTGGTTGGAGAGATCCATGTaGCCCACGTTGGTGCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LHLIPLRLRLIWSLEPGWLERSM*PTLVQR Trigger: CCGCTGCACCAACGTGGGCAACATGGATCTCTCCAA...CCACCCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CAA 90 bp | CGCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGCTCTCCAGTAGCTGTTaGAAAGGGTCAACCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RAPPHSLKTASHMEPGARLSSSC*KGSTPA Trigger: TGCTGGGGTTGACCCTTTCAAACAGCTACTGGAGAG...CCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGGTCCTGGAGACAGTGGGACAAGAAATGGTGTCCAGCAGGCCAGAGCTTAGCAGCTTGGCCTTCTaGGAGAGATCCATGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LQVLETVGQEMVSSRPELSSLAF*ERSMLP Trigger: GGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGCT...AAGCTCTGGCCTGCTGGACACCATTTCTTGTCCCACTGTCTCCAGGACCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS CCA 90 bp | TATCACAACCGTAGAAGGCTTGTAGGGAAGCCCAGCCCTGGTGGCTaGTTCCTCCTTGGAGGAACAGCAGCAGGTGGAGAAGACACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: YHNRRRLVGKPSPGG*FLLGGTAAGGEDTD Trigger: ATCTGTGTCTTCTCCACCTGCTGCTGTTCCTCCAAGGAGGAACCAGCCACCAGGGCTGGGCTTCCCTACAAGCCTTCTACGGTTGTGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGGTCCTGGAGACAGTGGGACAAGAAATGGTGTCCAGCAGGCCAGAGCTTTTGGTGGTGATGACGTaGCCATGGACCGTAGACACT | + |
|
Preference number: 5 (lower is better) Translates to: LQVLETVGQEMVSSRPELLVVMT*PWTVDT Trigger: AGTGTCTACGGTCCATGGCAACGTCATCACCACCAA...AAGCTCTGGCCTGCTGGACACCATTTCTTGTCCCACTGTCTCCAGGACCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
||
| CDS-3UTR CAA 90 bp | CGCGCTCCACCTCATTCCCTTAAGACTGCGTCTCATATGGAGCCTGGAGCCAGGAAGTCAGTAGTGATGTaGACGGCGTACCACGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: RAPPHSLKTASHMEPGARKSVVM*TAYHEI Trigger: TATCTCGTGGTACGCCGTCAACATCACTACTGACTT...CCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS-3UTR CAA 90 bp | TGTCCTGAGGTTATTAACTGGAGACTGGTCTGCCTGCAGGTCCTGGAGACAGTGTTGGTGGTGATGACGTaGCCATGGACCGTAGACACT | + |
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Preference number: 5 (lower is better) Translates to: CPEVINWRLVCLQVLETVLVVMT*PWTVDT Trigger: AGTGTCTACGGTCCATGGCAACGTCATCACCACCAA...CACTGTCTCCAGGACCTGCAGGCAGACCAGTCTCCAGTTAATAACCTCAGGACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CCA 90 bp | CAAGTAGAGGGCGGGGCCCAGTTCATACTTGGTTCCAGCATACAGTaGGTTGAAGAAGTCAGTAGTGATGTTGACGGCGTACCACGAGAT | + |
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Preference number: 5 (lower is better) Translates to: QVEGGAQFILGSSIQ*VEEVSSDVDGVPRD Trigger: ATCTCGTGGTACGCCGTCAACATCACTACTGACTTCTTCAACCCACTGTATGCTGGAACCAAGTATGAACTGGGCCCCGCCCTCTACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS-3UTR CAA 90 bp | TGTCCTGAGGTTATTAACTGGAGACTGGTCTGCCTGCAGGTCCTGGAGACAGTGTTCTCAAAGATGGTGTaGGTGGTGATGACGTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: CPEVINWRLVCLQVLETVFSKMV*VVMTLP Trigger: TGGCAACGTCATCACCACCAACACCATCTTTGAGAA...CACTGTCTCCAGGACCTGCAGGCAGACCAGTCTCCAGTTAATAACCTCAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS-3UTR CAA 90 bp | TTACACAGGTTCTGGGGATTTGAACTCAGGTCCTCATACTTGGGTAGCAAACACTTGGAGAGATCCATGTaGCCCACGTTGGTGCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: LHRFWGFELRSSYLGSKHLERSM*PTLVQR Trigger: CCGCTGCACCAACGTGGGCAACATGGATCTCTCCAA...GTGTTTGCTACCCAAGTATGAGGACCTGAGTTCAAATCCCCAGAACCTGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS-3UTR CAA 90 bp | GAGAAAATAGGTCAAGAGTCAACAGAGAGGAACTTTCAGCAGGCCAGGAGCATCCTCTCCAGTAGCTGTTaGAAAGGGTCAACCCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: EKIGQESTERNFQQARSILSSSC*KGSTPA Trigger: TGCTGGGGTTGACCCTTTCAAACAGCTACTGGAGAG...GATGCTCCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS-3UTR CAA 90 bp | GAGGTGGGTGACTCAGATCAGTTGTTAGTGACTCCCCCTTTCAAATCCTTTTGTAGCAGCTTGGCCTTCTaGGAGAGATCCATGTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: EVGDSDQLLVTPPFKSFCSSLAF*ERSMLP Trigger: GGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGCT...ACAAAAGGATTTGAAAGGGGGAGTCACTAACAACTGATCTGAGTCACCCACCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS-3UTR CAA 90 bp | AATAGGTCAAGAGTCAACAGAGAGGAACTTTCAGCAGGCCAGGAGCATCACAGCCCAGCATACAGTGGGTaGAAGAAGTCAGTAGTGATG | + |
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Preference number: 5 (lower is better) Translates to: NRSRVNREELSAGQEHHSPAYSG*KKSVVM Trigger: CATCACTACTGACTTCTTCAACCCACTGTATGCTGG...GCTGTGATGCTCCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS-3UTR CAA 90 bp | GAGGTGGGTGACTCAGATCAGTTGTTAGTGACTCCCCCTTTCAAATCCTTTTGTAAGTCAGTAGTGATGTaGACGGCGTACCACGAGATA | + |
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Preference number: 5 (lower is better) Translates to: EVGDSDQLLVTPPFKSFCKSVVM*TAYHEI Trigger: TATCTCGTGGTACGCCGTCAACATCACTACTGACTT...ACAAAAGGATTTGAAAGGGGGAGTCACTAACAACTGATCTGAGTCACCCACCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS GCA 72 bp | CCTTGGAGGAACAGCAGCAGGTGGAGAAGACACAGATaGCGCCCAGGATGGAGAGCAGGGAGGCACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PWRNSSRWRRHR*RPGWRAGRHSS Trigger: GCTGGAGTGCCTCCCTGCTCTCCATCCTGGGCGGCATCTGTGTCTTCTCCACCTGCTGCTGTTCCTCCAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CCA 72 bp | GGAGGGTCCCTGCAATGGCCAGCAGCTTGGCCTTCTTaGAGAGATCCATGTTGCCCACGTTGGTGCAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: GGSLQWPAAWPS*RDPCCPRWCSG Trigger: TCCGCTGCACCAACGTGGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CAA 72 bp | TGGAGGGTCCCTGCAATGGCCAGCAGCTTGGCCTTCTaGGAGAGATCCATGTTGCCCACGTTGGTGCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: WRVPAMASSLAF*ERSMLPTLVQR Trigger: CCGCTGCACCAACGTGGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CAA 90 bp | GCAAGTATGTGGAGGGTCCCTGCAATGGCCAGCAGCTTGGCCTTCTaGGAGAGATCCATGTTGCCCACGTTGGTGCAGCGGAGTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: ASMWRVPAMASSLAF*ERSMLPTLVQRSPT Trigger: GGTGGGACTCCGCTGCACCAACGTGGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCCACATACTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CAA 90 bp | CAGGCTCCAGCAAGTATGTGGAGGGTCCCTGCAATGGCCAGCAGCTaGGCCTTCTTGGAGAGATCCATGTTGCCCACGTTGGTGCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: QAPASMWRVPAMASS*AFLERSMLPTLVQR Trigger: CCGCTGCACCAACGTGGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCCACATACTTGCTGGAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS GCA 72 bp | TGGCCAGCAGCTTGGCCTTCTTGGAGAGATCCATGTTaGCCACGTTGGTGCAGCGGAGTCCCACCATGCCTA | + |
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Preference number: 6 (lower is better) Translates to: WPAAWPSWRDPC*PRWCSGVPPCL Trigger: TAGGCATGGTGGGACTCCGCTGCACCAACGTGGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGCTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CCA 72 bp | GAGATAGCCACCATCCCACAGGCTCCAGCAAGTATGTaGAGGGTCCCTGCAATGGCCAGCAGCTTGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: EIATIPQAPASM*RVPAMASSLAF Trigger: GAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCCACATACTTGCTGGAGCCTGTGGGATGGTGGCTATCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CCA 72 bp | TGGTGGCTGGTTCCTCCTTGGAGGAACAGCAGCAGGTaGAGAAGACACAGATGCCGCCCAGGATGGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: WWLVPPWRNSSR*RRHRCRPGWRA Trigger: TGCTCTCCATCCTGGGCGGCATCTGTGTCTTCTCCACCTGCTGCTGTTCCTCCAAGGAGGAACCAGCCACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CCA 72 bp | TGTAGGGAAGCCCAGCCCTGGTGGCTGGTTCCTCCTTaGAGGAACAGCAGCAGGTGGAGAAGACACAGATGC | + |
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Preference number: 6 (lower is better) Translates to: CREAQPWWLVPP*RNSSRWRRHRC Trigger: GCATCTGTGTCTTCTCCACCTGCTGCTGTTCCTCCAAGGAGGAACCAGCCACCAGGGCTGGGCTTCCCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CAA 72 bp | ATGGCCAGCAGCTTGGCCTTCTTGGAGAGATCCATGTaGCCCACGTTGGTGCAGCGGAGTCCCACCATGCCT | + |
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Preference number: 6 (lower is better) Translates to: MASSLAFLERSM*PTLVQRSPTMP Trigger: AGGCATGGTGGGACTCCGCTGCACCAACGTGGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGCTGGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS GCA 72 bp | TGGCCTTCTTGGAGAGATCCATGTTGCCCACGTTGGTaGAGCGGAGTCCCACCATGCCTAGAAAGAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: WPSWRDPCCPRW*SGVPPCLERGP Trigger: TGGGCCTCTTTCTAGGCATGGTGGGACTCCGCTGCACCAACGTGGGCAACATGGATCTCTCCAAGAAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS GCA 72 bp | CATCCCACAGGCTCCAGCAAGTATGTGGAGGGTCCCTaGAATGGCCAGCAGCTTGGCCTTCTTGGAGAGATC | + |
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Preference number: 6 (lower is better) Translates to: HPTGSSKYVEGP*NGQQLGLLGEI Trigger: GATCTCTCCAAGAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCCACATACTTGCTGGAGCCTGTGGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CCA 72 bp | GCTTGGCCTTCTTGGAGAGATCCATGTTGCCCACGTTaGTGCAGCGGAGTCCCACCATGCCTAGAAAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: AWPSWRDPCCPR*CSGVPPCLERG Trigger: GCCTCTTTCTAGGCATGGTGGGACTCCGCTGCACCAACGTGGGCAACATGGATCTCTCCAAGAAGGCCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS TCA 72 bp | GTTGCCATGGACCGTAGACACTCTCCAGTAGCTGTTTaGAAGGGTCAACCCCAGCATCAGCAGTCCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: VAMDRRHSPVAV*KGQPQHQQSQG Trigger: GCCCTGGGACTGCTGATGCTGGGGTTGACCCTTTCAAACAGCTACTGGAGAGTGTCTACGGTCCATGGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CCA 72 bp | CAAGTATGTGGAGGGTCCCTGCAATGGCCAGCAGCTTaGCCTTCTTGGAGAGATCCATGTTGCCCACGTTGG | + |
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Preference number: 6 (lower is better) Translates to: QVCGGSLQWPAA*PSWRDPCCPRW Trigger: CCAACGTGGGCAACATGGATCTCTCCAAGAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCCACATACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CCA 72 bp | GGCGGGGCCCAGTTCATACTTGGTTCCAGCATACAGTaGGTTGAAGAAGTCAGTAGTGATGTTGACGGCGTA | + |
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Preference number: 6 (lower is better) Translates to: GGAQFILGSSIQ*VEEVSSDVDGV Trigger: TACGCCGTCAACATCACTACTGACTTCTTCAACCCACTGTATGCTGGAACCAAGTATGAACTGGGCCCCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CAA 72 bp | GTGGCACAGCTGTACCACAGGTTCTCAAAGATGGTGTaGGTGGTGATGACGTTGCCATGGACCGTAGACACT | + |
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Preference number: 6 (lower is better) Translates to: VAQLYHRFSKMV*VVMTLPWTVDT Trigger: AGTGTCTACGGTCCATGGCAACGTCATCACCACCAACACCATCTTTGAGAACCTGTGGTACAGCTGTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CAA 90 bp | TACTTGGTTCCAGCATACAGTGGGTTGAAGAAGTCAGTAGTGATGTaGACGGCGTACCACGAGATAGCCACCATCCCACAGGCTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: YLVPAYSGLKKSVVM*TAYHEIATIPQAPA Trigger: TGCTGGAGCCTGTGGGATGGTGGCTATCTCGTGGTACGCCGTCAACATCACTACTGACTTCTTCAACCCACTGTATGCTGGAACCAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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| CDS CAA 72 bp | GGGCCCAGTTCATACTTGGTTCCAGCATACAGTGGGTaGAAGAAGTCAGTAGTGATGTTGACGGCGTACCAC | + |
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Preference number: 6 (lower is better) Translates to: GPSSYLVPAYSG*KKSVVMLTAYH Trigger: GTGGTACGCCGTCAACATCACTACTGACTTCTTCAACCCACTGTATGCTGGAACCAAGTATGAACTGGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001790.6 ENSMUST00000111093.8 |
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