Pregenerated sensors for CLDN14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047109Ensembl transcript IDs: ENSMUST00000050962.5, ENSMUST00000137163.2, ENSMUST00000142083.2, ENSMUST00000169391.8, ENSMUST00000177648.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTaGTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGCC | + |
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Preference number: 1 (lower is better) Translates to: EVFALKSTSFPVFRA*SLHPSHIHHWSFGA Trigger: GGCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCACTTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGGGGCCCAGCATCCCTaGCAGAAGCCCGGGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: QHFLEVFALKSTSFPVFRGAQHP*QKPGEG Trigger: TCCTTCCCCGGGCTTCTGCCAGGGATGCTGGGCCCC...CCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAAGTGCTG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| 3UTR-3UTR CCA 90 bp | AACCAGCACTTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCGGGGCCCAGCATCCCTaGCAGAAGCCCGGGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: NQHFLEVFALKSTSFPVFGAQHP*QKPGEG Trigger: TCCTTCCCCGGGCTTCTGCCAGGGATGCTGGGCCCC...GAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAAGTGCTGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| 3UTR CAA 90 bp | AGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTaGCTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: RSLCFEEHLLPCVPG*LSASFPHPSLVLWG Trigger: GCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCACTTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGCCATCATTGGTCCTTTaGGGCCCAGCATCCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: QHFLEVFALKSTSFPVFRPSLVL*GPASLA Trigger: TGCCAGGGATGCTGGGCCCCAAAGGACCAATGATGG...CCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAAGTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCACTTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGCCATCATTGGTCCTTTaGGGCCCAGCATCCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: PALFRSLCFEEHLLPCVPPSLVL*GPASLA Trigger: TGCCAGGGATGCTGGGCCCCAAAGGACCAATGATGG...CGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAAGTGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTTCCCACATCCATCATTaGTCCTTTGGGGCCCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LEVFALKSTSFPVFRACSSHIHH*SFGAQH Trigger: ATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGA...AGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| 3UTR CCA 72 bp | CGGGCTTGCTCTCTGCATCCTTCCCACATCCATCATTaGTCCTTTGGGGCCCAGCATCCCTGGCAGAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: RACSLHPSHIHH*SFGAQHPWQKP Trigger: GGGCTTCTGCCAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| 3UTR GCA 72 bp | AGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTaGATCCTTCCCACATCCATCATTGGTCCTTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: RAPPSLCSGLAL*ILPTSIIGPLG Trigger: CCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| 3UTR GCA 72 bp | GCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTaGTCTCTGCATCCTTCCCACATCCATCATTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: ALKSTSFPVFRA*SLHPSHIHHWS Trigger: GGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCACTTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGTCCATCATTGGTCCTTaGGGGCCCAGCATCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QHFLEVFALKSTSFPVFRSIIGP*GPSIPG Trigger: GCCAGGGATGCTGGGCCCCAAAGGACCAATGATGGA...CCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAAGTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR TCA 90 bp | CCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTGGCAGAAGCCCGGGGGGGCAGCGCCAGCAGTaGGCGGTAGATCTGACACTG | + |
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Preference number: 4 (lower is better) Translates to: PTSIIGPLGPSIPGRSPGGQRQQ*AVDLTL Trigger: CAGTGTCAGATCTACCGCTCACTGCTGGCGCTGCCC...CCCCGGGCTTCTGCCAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGG 64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | GCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATCAGGACACGGCCACCATaGACAGCAGGCCGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: APPSLCSGLALCILPTSIRTRPP*TAGRPA Trigger: TGCTGGCCGGCCTGCTGTGCATGGTGGCCGTGTCCT...GATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| 3UTR CAA 72 bp | CCGGGCTTGCTCTCTGCATCCTTCCCACATCCATCATaGGTCCTTTGGGGCCCAGCATCCCTGGCAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: PGLLSASFPHPS*VLWGPASLAEA Trigger: GGCTTCTGCCAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR TCA 90 bp | AGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATGGGCAGCGCCAGCAGTaGGCGGTAGATCTGACACTG | + |
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Preference number: 4 (lower is better) Translates to: STSFPVFRACSLHPSHIHGQRQQ*AVDLTL Trigger: CAGTGTCAGATCTACCGCTCACTGCTGGCGCTGCCC...ATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | AGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCCAGTCAGGATGTTGGTaGCCACATGGGCCGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RAPPSLCSGLALCILPTSQSGCW*PHGPSS Trigger: GGAGGACGGCCCATGTGGGCACCAACATCCTGACTG...GGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | GCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCTTCATGCCCACTACTaGGCAGGCGCAGGCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: ALKSTSFPVFRACSLHPSLHAHY*AGAGHA Trigger: GGCATGGCCTGCGCCTGCGCAGTAGTGGGCATGAAG...GGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | CATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTGGCAGAAGCTTCATGCCCACTACTaGGCAGGCGCAGGCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: HPSHIHHWSFGAQHPWQKLHAHY*AGAGHA Trigger: GGCATGGCCTGCGCCTGCGCAGTAGTGGGCATGAAG...CTTCTGCCAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTGGTGGTCTTGGCGGGTGTaGCTTTGGCGCAGCGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SLHPSHIHHWSFGAQHPWWSWRV*LWRSVC Trigger: GCACACGCTGCGCCAAAGGCACACCCGCCAAGACCA...CCAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | ATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTGGCAGAAGCTGGTCTTGGCGGGTGTaGCTTTGGCGCAGCGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: ILPTSIIGPLGPSIPGRSWSWRV*LWRSVC Trigger: GCACACGCTGCGCCAAAGGCACACCCGCCAAGACCA...GCTTCTGCCAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | ATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTGGCAGAAGCCGGCAGTCAGGATGTTaGTGCCCACATGGGCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: ILPTSIIGPLGPSIPGRSRQSGC*CPHGPS Trigger: GGACGGCCCATGTGGGCACCAACATCCTGACTGCCG...GCTTCTGCCAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | GCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATCCTGCAAAGGTGGTCTTaGCGGGTGTGCCTTTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: APPSLCSGLALCILPTSILQRWS*RVCLWR Trigger: GCGCCAAAGGCACACCCGCCAAGACCACCTTTGCAG...GATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCAGTCAGGATGTTGGTaGCCACATGGGCCGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: EEHLLPCVPGLLSASFPHQSGCW*PHGPSS Trigger: GGAGGACGGCCCATGTGGGCACCAACATCCTGACTG...ATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | CCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTGGCAGAAGCCCGGGGACTGGTAGATGCCTGTaGTGTGCCACACACATTCCA | + |
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Preference number: 4 (lower is better) Translates to: PTSIIGPLGPSIPGRSPGTGRCL*CATHIP Trigger: TGGAATGTGTGTGGCACAGCACAGGCATCTACCAGT...CCCCGGGCTTCTGCCAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | CTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCCTTCATGCCCACTACTaGGCAGGCGCAGGCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: LCFEEHLLPCVPGLLSASLHAHY*AGAGHA Trigger: GGCATGGCCTGCGCCTGCGCAGTAGTGGGCATGAAG...GGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | AGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATATGTTGGTGCCCACATaGGCCGTCCTCCGCCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: STSFPVFRACSLHPSHIHMLVPT*AVLRQC Trigger: ACACTGGCGGAGGACGGCCCATGTGGGCACCAACAT...ATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | CTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTGTGGCGGGTGTGCCTTTaGCGCAGCGTGTGCACTTCA | + |
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Preference number: 4 (lower is better) Translates to: LSASFPHPSLVLWGPASLWRVCL*RSVCTS Trigger: TGAAGTGCACACGCTGCGCCAAAGGCACACCCGCCA...CAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | GCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCTGGCGGGTGTGCCTTTaGCGCAGCGTGTGCACTTCA | + |
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Preference number: 4 (lower is better) Translates to: ALKSTSFPVFRACSLHPSWRVCL*RSVCTS Trigger: TGAAGTGCACACGCTGCGCCAAAGGCACACCCGCCA...GGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTGGCTGCAAAGGTGGTCTTaGCGGGTGTGCCTTTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SLHPSHIHHWSFGAQHPWLQRWS*RVCLWR Trigger: GCGCCAAAGGCACACCCGCCAAGACCACCTTTGCAG...CCAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | CTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTGGCAGCCAGCACTGCAAAGGTaGTCTTGGCGGGTGTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LHPSHIHHWSFGAQHPWQPALQR*SWRVCL Trigger: AAGGCACACCCGCCAAGACCACCTTTGCAGTGCTGG...CTGCCAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR TCA 90 bp | CTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGCAGCGCCAGCAGTaGGCGGTAGATCTGACACTG | + |
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Preference number: 4 (lower is better) Translates to: LCSGLALCILPTSIIGPLGQRQQ*AVDLTL Trigger: CAGTGTCAGATCTACCGCTCACTGCTGGCGCTGCCC...CAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | CCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTCAGTCAGGATGTTGGTaGCCACATGGGCCGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PCVPGLLSASFPHPSLVLQSGCW*PHGPSS Trigger: GGAGGACGGCCCATGTGGGCACCAACATCCTGACTG...AAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | CTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGTGGTCTTGGCGGGTGTaGCTTTGGCGCAGCGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LCSGLALCILPTSIIGPLWSWRV*LWRSVC Trigger: GCACACGCTGCGCCAAAGGCACACCCGCCAAGACCA...CAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | CTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGAGCCTGTACCCACTGTaGGCGGCTGAGGTCACCGAG | + |
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Preference number: 4 (lower is better) Translates to: LCSGLALCILPTSIIGPLSLYPL*AAEVTE Trigger: CTCGGTGACCTCAGCCGCGCACAGTGGGTACAGGCT...CAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | TGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGATGTTGGTGCCCACATaGGCCGTCCTCCGCCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: CSGLALCILPTSIIGPLGMLVPT*AVLRQC Trigger: ACACTGGCGGAGGACGGCCCATGTGGGCACCAACAT...CCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | GCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATCTCTGACACTGGTAGATaGCTGTGCTGTGCCACACAC | + |
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Preference number: 4 (lower is better) Translates to: APPSLCSGLALCILPTSISDTGR*LCCATH Trigger: GTGTGTGGCACAGCACAGGCATCTACCAGTGTCAGA...GATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | TTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCAGGACACGGCCACCATaGACAGCAGGCCGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FRSLCFEEHLLPCVPGLLRTRPP*TAGRPA Trigger: TGCTGGCCGGCCTGCTGTGCATGGTGGCCGTGTCCT...GAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | CTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGATGTTGGTGCCCACATaGGCCGTCCTCCGCCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: LCSGLALCILPTSIIGPLMLVPT*AVLRQC Trigger: ACACTGGCGGAGGACGGCCCATGTGGGCACCAACAT...CAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | TGCTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTCTGACACTGGTAGATaGCTGTGCTGTGCCACACAC | + |
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Preference number: 4 (lower is better) Translates to: CSLHPSHIHHWSFGAQHPSDTGR*LCCATH Trigger: GTGTGTGGCACAGCACAGGCATCTACCAGTGTCAGA...GGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | AGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATTCTGACACTGGTAGATaGCTGTGCTGTGCCACACAC | + |
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Preference number: 4 (lower is better) Translates to: STSFPVFRACSLHPSHIHSDTGR*LCCATH Trigger: GTGTGTGGCACAGCACAGGCATCTACCAGTGTCAGA...ATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTGGCGATTTCAAACTTCATaGCACTGGGCAGCAGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: SLHPSHIHHWSFGAQHPWRFQTS*HWAAAG Trigger: ACCCGCTGCTGCCCAGTGGCATGAAGTTTGAAATCG...CCAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCCAGGTACAGGGCCTaGCCGATTTCAAACTTCATG | + |
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Preference number: 4 (lower is better) Translates to: EEHLLPCVPGLLSASFPHPRYRA*PISNFM Trigger: CATGAAGTTTGAAATCGGCCAGGCCCTGTACCTGGG...ATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | CTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTGACTGGTAGATGCCTGTaGTGTGCCACACACATTCCA | + |
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Preference number: 4 (lower is better) Translates to: LSASFPHPSLVLWGPASLTGRCL*CATHIP Trigger: TGGAATGTGTGTGGCACAGCACAGGCATCTACCAGT...CAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | CCAGCACTTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGAGCCTGTACCCACTGTaGGCGGCTGAGGTCACCGAG | + |
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Preference number: 4 (lower is better) Translates to: PALFRSLCFEEHLLPCVPSLYPL*AAEVTE Trigger: CTCGGTGACCTCAGCCGCGCACAGTGGGTACAGGCT...CGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAAGTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | CAGCACTTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGAGCCTGTACCCACTGTaGGCGGCTGAGGTCACCGAG | + |
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Preference number: 4 (lower is better) Translates to: QHFLEVFALKSTSFPVFRSLYPL*AAEVTE Trigger: CTCGGTGACCTCAGCCGCGCACAGTGGGTACAGGCT...CCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAAGTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | CCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTCCCAGGTACAGGGCCTaGCCGATTTCAAACTTCATG | + |
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Preference number: 4 (lower is better) Translates to: PCVPGLLSASFPHPSLVLPRYRA*PISNFM Trigger: CATGAAGTTTGAAATCGGCCAGGCCCTGTACCTGGG...AAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| 3UTR CAA 72 bp | TGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTaGCTCTCTGCATCCTTCCCACATCCATCATTGGTC | + |
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Preference number: 4 (lower is better) Translates to: CFEEHLLPCVPG*LSASFPHPSLV Trigger: GACCAATGATGGATGTGGGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | AACCAGCACTTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCAGGACACGGCCACCATaGACAGCAGGCCGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NQHFLEVFALKSTSFPVFRTRPP*TAGRPA Trigger: TGCTGGCCGGCCTGCTGTGCATGGTGGCCGTGTCCT...GAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAAGTGCTGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | TGCTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCCAAACTTCATGCCACTaGGCAGCAGCGGGTTATAAA | + |
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Preference number: 4 (lower is better) Translates to: CSLHPSHIHHWSFGAQHPQTSCH*AAAGYK Trigger: TTTATAACCCGCTGCTGCCCAGTGGCATGAAGTTTG...GGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | TTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCCCAGCACTGCAAAGGTaGTCTTGGCGGGTGTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: FLEVFALKSTSFPVFRACPALQR*SWRVCL Trigger: AAGGCACACCCGCCAAGACCACCTTTGCAGTGCTGG...GCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | CTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCCAAACTTCATGCCACTaGGCAGCAGCGGGTTATAAA | + |
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Preference number: 4 (lower is better) Translates to: LCFEEHLLPCVPGLLSASQTSCH*AAAGYK Trigger: TTTATAACCCGCTGCTGCCCAGTGGCATGAAGTTTG...GGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | TTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCGATTTCAAACTTCATaGCACTGGGCAGCAGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: LEVFALKSTSFPVFRACSRFQTS*HWAAAG Trigger: ACCCGCTGCTGCCCAGTGGCATGAAGTTTGAAATCG...AGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | AACCAGCACTTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCTGGCGGGTGTGCCTTTaGCGCAGCGTGTGCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NQHFLEVFALKSTSFPVFWRVCL*RSVCTS Trigger: TGAAGTGCACACGCTGCGCCAAAGGCACACCCGCCA...GAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAAGTGCTGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR GCA 90 bp | TTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCCGATTTCAAACTTCATaGCACTGGGCAGCAGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLEVFALKSTSFPVFRACRFQTS*HWAAAG Trigger: ACCCGCTGCTGCCCAGTGGCATGAAGTTTGAAATCG...GCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | GCTTCCAAGACACTCTTTATTGAGCTCTTATTAAGCCACCCGCATAAATACATACGGCAGTCAGGATGTTaGTGCCCACATGGGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASKTLFIELLLSHPHKYIRQSGC*CPHGPS Trigger: GGACGGCCCATGTGGGCACCAACATCCTGACTGCCG...TATGTATTTATGCGGGTGGCTTAATAAGAGCTCAATAAAGAGTGTCTTGGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | TTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCCAAACTTCATGCCACTaGGCAGCAGCGGGTTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRSLCFEEHLLPCVPGLLQTSCH*AAAGYK Trigger: TTTATAACCCGCTGCTGCCCAGTGGCATGAAGTTTG...GAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | GCTTCCAAGACACTCTTTATTGAGCTCTTATTAAGCCACCCGCATAAATACATACTGCAAAGGTGGTCTTaGCGGGTGTGCCTTTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASKTLFIELLLSHPHKYILQRWS*RVCLWR Trigger: GCGCCAAAGGCACACCCGCCAAGACCACCTTTGCAG...TATGTATTTATGCGGGTGGCTTAATAAGAGCTCAATAAAGAGTGTCTTGGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CCA 90 bp | AACCAGCACTTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCCCAGGTACAGGGCCTaGCCGATTTCAAACTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: NQHFLEVFALKSTSFPVFPRYRA*PISNFM Trigger: CATGAAGTTTGAAATCGGCCAGGCCCTGTACCTGGG...GAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAAGTGCTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS GCA 90 bp | AGGTGGTCTTGGCGGGTGTGCCTTTGGCGCAGCGTGTGCACTTCATaGCCACTACTGCGCAGGCGCAGGCCATGCCCGACAACAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RWSWRVCLWRSVCTS*PLLRRRRPCPTTGR Trigger: CCTGCCTGTTGTCGGGCATGGCCTGCGCCTGCGCAGTAGTGGGCATGAAGTGCACACGCTGCGCCAAAGGCACACCCGCCAAGACCACCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS GCA 90 bp | GGCGGGTGTGCCTTTGGCGCAGCGTGTGCACTTCATGCCCACTACTaGGCAGGCGCAGGCCATGCCCGACAACAGGCAGGAGATGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: GGCAFGAACALHAHY*AGAGHARQQAGDDH Trigger: ATGGTCATCTCCTGCCTGTTGTCGGGCATGGCCTGCGCCTGCGCAGTAGTGGGCATGAAGTGCACACGCTGCGCCAAAGGCACACCCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS GCA 90 bp | GCACTGCAAAGGTGGTCTTGGCGGGTGTGCCTTTGGCGCAGCGTGTaGACTTCATGCCCACTACTGCGCAGGCGCAGGCCATGCCCGACA | + |
|
Preference number: 5 (lower is better) Translates to: ALQRWSWRVCLWRSV*TSCPLLRRRRPCPT Trigger: TGTCGGGCATGGCCTGCGCCTGCGCAGTAGTGGGCATGAAGTGCACACGCTGCGCCAAAGGCACACCCGCCAAGACCACCTTTGCAGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS CCA 90 bp | GGCAGTCAGGATGTTGGTGCCCACATGGGCCGTCCTCCGCCAGTGTaGCAGGATGGTGGTGATGAGCGTTCCTACCATGCCCAGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: GSQDVGAHMGRPPPV*QDGGDERSYHAQEA Trigger: AGCTTCCTGGGCATGGTAGGAACGCTCATCACCACCATCCTGCCACACTGGCGGAGGACGGCCCATGTGGGCACCAACATCCTGACTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050962.5 ENSMUST00000137163.2 ENSMUST00000142083.2 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS CCA 90 bp | CACTGGGCAGCAGCGGGTTATAAAAATTCTGCACCACGTCATTCGTaGTCCAGGACACGGCCACCATGCACAGCAGGCCGGCCAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HWAAAGYKNSAPRHS*SRTRPPCTAGRPAG Trigger: TCCTGCTGGCCGGCCTGCTGTGCATGGTGGCCGTGTCCTGGACCACGAATGACGTGGTGCAGAATTTTTATAACCCGCTGCTGCCCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CAA 90 bp | CATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCTGGCAGAAGTTGGCGGGTGTGCCTTaGGCGCAGCGTGTGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: HPSHIHHWSFGAQHPWQKLAGVP*AQRVHF Trigger: GAAGTGCACACGCTGCGCCAAAGGCACACCCGCCAA...CTTCTGCCAGGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CAA 90 bp | GCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCTCTCTGCATCCTTCCACTGCAAAGGTGGTCTaGGCGGGTGTGCCTTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ALKSTSFPVFRACSLHPSTAKVV*AGVPLA Trigger: CGCCAAAGGCACACCCGCCAAGACCACCTTTGCAGT...GGAAGGATGCAGAGAGCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CAA 90 bp | TGCTCTCTGCATCCTTCCCACATCCATCATTGGTCCTTTGGGGCCCAGCATCCCACTGCAAAGGTGGTCTaGGCGGGTGTGCCTTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CSLHPSHIHHWSFGAQHPTAKVV*AGVPLA Trigger: CGCCAAAGGCACACCCGCCAAGACCACCTTTGCAGT...GGGATGCTGGGCCCCAAAGGACCAATGATGGATGTGGGAAGGATGCAGAGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CAA 90 bp | TTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCCGGGCTTGCACTGCAAAGGTGGTCTaGGCGGGTGTGCCTTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FLEVFALKSTSFPVFRACTAKVV*AGVPLA Trigger: CGCCAAAGGCACACCCGCCAAGACCACCTTTGCAGT...GCAAGCCCGGAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS-3UTR CAA 90 bp | AACCAGCACTTTTTAGAAGTCTTTGCTTTGAAGAGCACCTCCTTCCCTGTGTTCTTGGCGGGTGTGCCTTaGGCGCAGCGTGTGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: NQHFLEVFALKSTSFPVFLAGVP*AQRVHF Trigger: GAAGTGCACACGCTGCGCCAAAGGCACACCCGCCAA...GAACACAGGGAAGGAGGTGCTCTTCAAAGCAAAGACTTCTAAAAAGTGCTGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS GCA 72 bp | TGGCGGGTGTGCCTTTGGCGCAGCGTGTGCACTTCATaGCCACTACTGCGCAGGCGCAGGCCATGCCCGACA | + |
|
Preference number: 6 (lower is better) Translates to: WRVCLWRSVCTS*PLLRRRRPCPT Trigger: TGTCGGGCATGGCCTGCGCCTGCGCAGTAGTGGGCATGAAGTGCACACGCTGCGCCAAAGGCACACCCGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS GCA 72 bp | GCCTTTGGCGCAGCGTGTGCACTTCATGCCCACTACTaGGCAGGCGCAGGCCATGCCCGACAACAGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AFGAACALHAHY*AGAGHARQQAG Trigger: TCCTGCCTGTTGTCGGGCATGGCCTGCGCCTGCGCAGTAGTGGGCATGAAGTGCACACGCTGCGCCAAAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS GCA 72 bp | AGGTGGTCTTGGCGGGTGTGCCTTTGGCGCAGCGTGTaGACTTCATGCCCACTACTGCGCAGGCGCAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RWSWRVCLWRSV*TSCPLLRRRRP Trigger: TGGCCTGCGCCTGCGCAGTAGTGGGCATGAAGTGCACACGCTGCGCCAAAGGCACACCCGCCAAGACCACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS TCA 72 bp | CACGTAGTCATTCAGCCTGTACCCACTGTGCGCGGCTaGGGTCACCGAGGGGGCACGGTTGTCCTTGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HVVIQPVPTVRG*GHRGGTVVLVG Trigger: GCCTACAAGGACAACCGTGCCCCCTCGGTGACCTCAGCCGCGCACAGTGGGTACAGGCTGAATGACTACGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS GCA 72 bp | GTCCCTTCAGGTAGGATACGGCAGTCAGGATGTTGGTaGCCACATGGGCCGTCCTCCGCCAGTGTGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VPSGRIRQSGCW*PHGPSSASVAG Trigger: TCCTGCCACACTGGCGGAGGACGGCCCATGTGGGCACCAACATCCTGACTGCCGTATCCTACCTGAAGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050962.5 ENSMUST00000137163.2 ENSMUST00000142083.2 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS CCA 72 bp | CCAGCACTGCAAAGGTGGTCTTGGCGGGTGTGCCTTTaGCGCAGCGTGTGCACTTCATGCCCACTACTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PALQRWSWRVCL*RSVCTSCPLLR Trigger: GCGCAGTAGTGGGCATGAAGTGCACACGCTGCGCCAAAGGCACACCCGCCAAGACCACCTTTGCAGTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS CAA 72 bp | CCCAGCACTGCAAAGGTGGTCTTGGCGGGTGTGCCTTaGGCGCAGCGTGTGCACTTCATGCCCACTACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSTAKVVLAGVP*AQRVHFMPTTA Trigger: CGCAGTAGTGGGCATGAAGTGCACACGCTGCGCCAAAGGCACACCCGCCAAGACCACCTTTGCAGTGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS CCA 72 bp | ACAGTCCCTTCAGGTAGGATACGGCAGTCAGGATGTTaGTGCCCACATGGGCCGTCCTCCGCCAGTGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TVPSGRIRQSGC*CPHGPSSASVA Trigger: TGCCACACTGGCGGAGGACGGCCCATGTGGGCACCAACATCCTGACTGCCGTATCCTACCTGAAGGGACTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050962.5 ENSMUST00000142083.2 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS CCA 72 bp | GCAGCGGGTTATAAAAATTCTGCACCACGTCATTCGTaGTCCAGGACACGGCCACCATGCACAGCAGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: AAGYKNSAPRHS*SRTRPPCTAGR Trigger: CCGGCCTGCTGTGCATGGTGGCCGTGTCCTGGACCACGAATGACGTGGTGCAGAATTTTTATAACCCGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS GCA 72 bp | AGCCCAGGTACAGGGCCTGGCCGATTTCAAACTTCATaGCACTGGGCAGCAGCGGGTTATAAAAATTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPGTGPGRFQTS*HWAAAGYKNSA Trigger: TGCAGAATTTTTATAACCCGCTGCTGCCCAGTGGCATGAAGTTTGAAATCGGCCAGGCCCTGTACCTGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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| CDS CCA 72 bp | GGTACAGGGCCTGGCCGATTTCAAACTTCATGCCACTaGGCAGCAGCGGGTTATAAAAATTCTGCACCACGT | + |
|
Preference number: 6 (lower is better) Translates to: GTGPGRFQTSCH*AAAGYKNSAPR Trigger: ACGTGGTGCAGAATTTTTATAACCCGCTGCTGCCCAGTGGCATGAAGTTTGAAATCGGCCAGGCCCTGTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050962.5 ENSMUST00000169391.8 ENSMUST00000177648.8 |
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