Pregenerated sensors for CLDN12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046798

Ensembl transcript IDs: ENSMUST00000060947.14, ENSMUST00000115445.8, ENSMUST00000115446.8, ENSMUST00000179804.8

Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	GGAGGAGACCTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCTaGTGGTGGACCACAGGCTGTCTGTGTCACAAAGACATCTTTCAG	+
Preference number: 1 (lower is better) Translates to: GGDLIKGNFQRPGYC*WWTTGCLCHKDIFQ Trigger: CTGAAAGATGTCTTTGTGACACAGACAGCCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAGGTCTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR GCA 90 bp	GGAACTTGCTATGGAGACCAGAATTTCCAGAAATGCACCTGTCACTaGCTCCTGAGTGCTGGTATTAAAGTCAAAAGCCACTACACCTGG	+
Preference number: 1 (lower is better) Translates to: GTCYGDQNFQKCTCH*LLSAGIKVKSHYTW Trigger: CCAGGTGTAGTGGCTTTTGACTTTAATACCAGCACTCAGGAGGCAGTGACAGGTGCATTTCTGGAAATTCTGGTCTCCATAGCAAGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR GCA 90 bp	TTTAAAGACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTaGTATGGAGACCAGAATTTCCAGAAATGCACCTGTCACTGCCTC	+
Preference number: 1 (lower is better) Translates to: FKDRFSLCSSDWPGT*YGDQNFQKCTCHCL Trigger: GAGGCAGTGACAGGTGCATTTCTGGAAATTCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGTCTTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CCA 90 bp	ATAAACATGAGGCAGCACAGCACACCCACTGAGGATTCTACCTTGTaGTTTACAGCACACACTATCCGTCATAGGGCGTATGTACAAGCA	+
Preference number: 1 (lower is better) Translates to: INMRQHSTPTEDSTL*FTAHTIRHRAYVQA Trigger: TGCTTGTACATACGCCCTATGACGGATAGTGTGTGCTGTAAACCACAAGGTAGAATCCTCAGTGGGTGTGCTGTGCTGCCTCATGTTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CCA 90 bp	CACTGCCTCCTGAGTGCTGGTATTAAAGTCAAAAGCCACTACACCTaGCCCTACTTTTATCTCTGTATACTAACACCAAGGCATGGTAGA	+
Preference number: 1 (lower is better) Translates to: HCLLSAGIKVKSHYT*PYFYLCILTPRHGR Trigger: TCTACCATGCCTTGGTGTTAGTATACAGAGATAAAAGTAGGGCCAGGTGTAGTGGCTTTTGACTTTAATACCAGCACTCAGGAGGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 90 bp	TTTACAGCACACACTATCCGTCATAGGGCGTATGTACAAGCAGAGTaGACTCAGAATCTCAGGTTTATTCTTCTCCCAAAGCTGGGTAAC	+
Preference number: 1 (lower is better) Translates to: FTAHTIRHRAYVQAE*TQNLRFILLPKLGN Trigger: GTTACCCAGCTTTGGGAGAAGAATAAACCTGAGATTCTGAGTTCACTCTGCTTGTACATACGCCCTATGACGGATAGTGTGTGCTGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 90 bp	TCCACCTTTCAATCATCGGAGTCAATGCACAATCTGAAATACGGGTaGAGATCAAACAGCATTGTTCAATATGCTGTCTTCACTGCCTCC	+
Preference number: 1 (lower is better) Translates to: STFQSSESMHNLKYG*RSNSIVQYAVFTAS Trigger: GGAGGCAGTGAAGACAGCATATTGAACAATGCTGTTTGATCTTCACCCGTATTTCAGATTGTGCATTGACTCCGATGATTGAAAGGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CCA 90 bp	ACAGCATTGTTCAATATGCTGTCTTCACTGCCTCCAGTGTTATCATaGGTCCTTTCACATAAGCTATTGATCAGACATCAACAAGGAGGC	+
Preference number: 1 (lower is better) Translates to: TALFNMLSSLPPVLS*VLSHKLLIRHQQGG Trigger: GCCTCCTTGTTGATGTCTGATCAATAGCTTATGTGAAAGGACCCATGATAACACTGGAGGCAGTGAAGACAGCATATTGAACAATGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 90 bp	AAACTGCCCCTTCCACCTTTCAATCATCGGAGTCAATGCACAATCTaGAATACGGGTGAAGATCAAACAGCATTGTTCAATATGCTGTCT	+
Preference number: 1 (lower is better) Translates to: KLPLPPFNHRSQCTI*NTGEDQTALFNMLS Trigger: AGACAGCATATTGAACAATGCTGTTTGATCTTCACCCGTATTTCAGATTGTGCATTGACTCCGATGATTGAAAGGTGGAAGGGGCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 90 bp	ACTACAGTCCTTACAAACAATGCTAGTACGTGGACATTATCTAAATaGGCAGCTCAAATCCCTAAGCTAAGACCCAACACCCCTCAATGT	+
Preference number: 1 (lower is better) Translates to: TTVLTNNASTWTLSK*AAQIPKLRPNTPQC Trigger: ACATTGAGGGGTGTTGGGTCTTAGCTTAGGGATTTGAGCTGCTCATTTAGATAATGTCCACGTACTAGCATTGTTTGTAAGGACTGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR GCA 90 bp	GCACAATCTGAAATACGGGTGAAGATCAAACAGCATTGTTCAATATaGTGTCTTCACTGCCTCCAGTGTTATCATGGGTCCTTTCACATA	+
Preference number: 1 (lower is better) Translates to: AQSEIRVKIKQHCSI*CLHCLQCYHGSFHI Trigger: TATGTGAAAGGACCCATGATAACACTGGAGGCAGTGAAGACAGCATATTGAACAATGCTGTTTGATCTTCACCCGTATTTCAGATTGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CCA 90 bp	AAGCAGAGTGAACTCAGAATCTCAGGTTTATTCTTCTCCCAAAGCTaGGTAACAGAAATTCTATGCACCGTCTCACATTCAAGGTTCTTT	+
Preference number: 1 (lower is better) Translates to: KQSELRISGLFFSQS*VTEILCTVSHSRFF Trigger: AAAGAACCTTGAATGTGAGACGGTGCATAGAATTTCTGTTACCCAGCTTTGGGAGAAGAATAAACCTGAGATTCTGAGTTCACTCTGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 90 bp	AATCTTCAGTATACTGATGCCTATTCAATTAGTCCCCAGAGAGAATaGAATTATACCTTCAAGCTGGAAGAGTTCTGGAGACAGACAAAC	+
Preference number: 1 (lower is better) Translates to: NLQYTDAYSISPQRE*NYTFKLEEFWRQTN Trigger: GTTTGTCTGTCTCCAGAACTCTTCCAGCTTGAAGGTATAATTTCATTCTCTCTGGGGACTAATTGAATAGGCATCAGTATACTGAAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 90 bp	TCTAGCAGCATTTCATTCTACCAAGATATACAAATTTGGCTCCACTaGCTGATAAGGAACATAGGAAAAATGTACACAGGTCCAAAAAGG	+
Preference number: 1 (lower is better) Translates to: SSSISFYQDIQIWLH*LIRNIGKMYTGPKR Trigger: CCTTTTTGGACCTGTGTACATTTTTCCTATGTTCCTTATCAGTCAGTGGAGCCAAATTTGTATATCTTGGTAGAATGAAATGCTGCTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGACGTCCAGGCTATTGCTaGTGGTGGACCACAGGCTGT	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRRPGYC*WWTTGC Trigger: ACAGCCTGTGGTCCACCACCAGCAATAGCCTGGACG...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	TGGCCTGGAACTTGCTATGGAGACCAGAATTTCCAGAAATGCACCTGTCACTGCCCAGGCTATTGCTGGTaGTGGACCACAGGCTGTCTG	+
Preference number: 2 (lower is better) Translates to: WPGTCYGDQNFQKCTCHCPGYCW*WTTGCL Trigger: CAGACAGCCTGTGGTCCACCACCAGCAATAGCCTGG...GCAGTGACAGGTGCATTTCTGGAAATTCTGGTCTCCATAGCAAGTTCCAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGAGCCACTGTCTTGGAATaGCCAACACTCAGCTCCATT	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRATVLE*PTLSSI Trigger: AATGGAGCTGAGTGTTGGTCATTCCAAGACAGTGGC...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGAGAGCTGCCACTGTCTTaGAATGACCAACACTCAGCT	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRELPLS*NDQHSA Trigger: AGCTGAGTGTTGGTCATTCCAAGACAGTGGCAGCTC...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGACTATGGGAGGAGACCTaGTTAAAGGGAATTTCCAGC	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRLWEET*LKGISS Trigger: GCTGGAAATTCCCTTTAATCAGGTCTCCTCCCATAG...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	ACGGCTATGGGAGGAGACCTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCAGTCTGAGTACACACTaGTCTGCAGTGATCTCTAGG	+
Preference number: 2 (lower is better) Translates to: TAMGGDLIKGNFQRPGYCSLSTH*SAVISR Trigger: CCTAGAGATCACTGCAGACCAGTGTGTACTCAGACT...GCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAGGTCTCCTCCCATAGCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	GGGCGTATGTACAAGCAGAGTGAACTCAGAATCTCAGGTTTATTCTTCTCCCAACGTCCAGGCTATTGCTaGTGGTGGACCACAGGCTGT	+
Preference number: 2 (lower is better) Translates to: GRMYKQSELRISGLFFSQRPGYC*WWTTGC Trigger: ACAGCCTGTGGTCCACCACCAGCAATAGCCTGGACG...TTGGGAGAAGAATAAACCTGAGATTCTGAGTTCACTCTGCTTGTACATACGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGAACTCAGCTCCATTTATaGGTGAGAAGAACCAGAGGT	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRTQLHL*VRRTRG Trigger: ACCTCTGGTTCTTCTCACTCATAAATGGAGCTGAGT...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR GCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGAATATGCTGTCTTCACTaGCTCCAGTGTTATCATGGG	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRICCLH*LQCYHG Trigger: CCCATGATAACACTGGAGGCAGTGAAGACAGCATAT...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR GCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGACAGCATTGTTCAATATaGTGTCTTCACTGCCTCCAG	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRQHCSI*CLHCLQ Trigger: CTGGAGGCAGTGAAGACAGCATATTGAACAATGCTG...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGACCTGATAAGGGGATCTaGAAAGGGATTCTTGCTTCA	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRPDKGI*KGILAS Trigger: TGAAGCAAGAATCCCTTTCCAGATCCCCTTATCAGG...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CAA 90 bp	CCAGCGCATGAGCACTACCTGATAAGGGGATCTGGAAAGGGATTCTaGCTTCAAATGAAGCAACATACTGACTGTCTCCTGACGCATTGT	+
Preference number: 2 (lower is better) Translates to: PAHEHYLIRGSGKGF*LQMKQHTDCLLTHC Trigger: ACAATGCGTCAGGAGACAGTCAGTATGTTGCTTCATTTGAAGCAAGAATCCCTTTCCAGATCCCCTTATCAGGTAGTGCTCATGCGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGAAGTCCCCAGAGAGAATaGAATTATACCTTCAAGCTG	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRSPQRE*NYTFKL Trigger: CAGCTTGAAGGTATAATTTCATTCTCTCTGGGGACT...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	CTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCTGGTGGTGGACCACAGGCGATTCTTGCTTCAAATaGAGCAACATACTGACTGTC	+
Preference number: 2 (lower is better) Translates to: LIKGNFQRPGYCWWWTTGDSCFK*SNILTV Trigger: GACAGTCAGTATGTTGCTTCATTTGAAGCAAGAATC...GCCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	TGGCCTGGAACTTGCTATGGAGACCAGAATTTCCAGAAATGCACCTGTCACTGCACTCAGCTCCATTTATaGGTGAGAAGAACCAGAGGT	+
Preference number: 2 (lower is better) Translates to: WPGTCYGDQNFQKCTCHCTQLHL*VRRTRG Trigger: ACCTCTGGTTCTTCTCACTCATAAATGGAGCTGAGT...GCAGTGACAGGTGCATTTCTGGAAATTCTGGTCTCCATAGCAAGTTCCAGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGACCACTGGTTATCAGGTaGATTAGATCAACATTCCTA	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRPLVIR*IRSTFL Trigger: TAGGAATGTTGATCTAATTCACCTGATAACCAGTGG...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGATGGACATTATCTAAATaGGCAGCTCAAATCCCTAAG	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRWTLSK*AAQIPK Trigger: CTTAGGGATTTGAGCTGCTCATTTAGATAATGTCCA...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGAATTATACCTTCAAGCTaGAAGAGTTCTGGAGACAGA	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRIIPSS*KSSGDR Trigger: TCTGTCTCCAGAACTCTTCCAGCTTGAAGGTATAAT...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	ATCTCAATAACAGCCCCAGTGACTCAAAAGCATTGTAAATACGTGCTTTCCTTTCGTCCAGGCTATTGCTaGTGGTGGACCACAGGCTGT	+
Preference number: 2 (lower is better) Translates to: ISITAPVTQKHCKYVLSFRPGYC*WWTTGC Trigger: ACAGCCTGTGGTCCACCACCAGCAATAGCCTGGACG...AAAGGAAAGCACGTATTTACAATGCTTTTGAGTCACTGGGGCTGTTATTGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	GGGCGTATGTACAAGCAGAGTGAACTCAGAATCTCAGGTTTATTCTTCTCCCAACTGTGTAGCTCTGACTaGCCTGGAACTTGCTATGGA	+
Preference number: 2 (lower is better) Translates to: GRMYKQSELRISGLFFSQLCSSD*PGTCYG Trigger: TCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAG...TTGGGAGAAGAATAAACCTGAGATTCTGAGTTCACTCTGCTTGTACATACGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CAA 90 bp	TTAATAAACATGAGGCAGCACAGCACACCCACTGAGGATTCTACCTaGTGGTTTACAGCACACACTATCCGTCATAGGGCGTATGTACAA	+
Preference number: 2 (lower is better) Translates to: LINMRQHSTPTEDST*WFTAHTIRHRAYVQ Trigger: TTGTACATACGCCCTATGACGGATAGTGTGTGCTGTAAACCACAAGGTAGAATCCTCAGTGGGTGTGCTGTGCTGCCTCATGTTTATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ACGGCTATGGGAGGAGACCTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCAATCTGAAATACGGGTaGAGATCAAACAGCATTGTT	+
Preference number: 2 (lower is better) Translates to: TAMGGDLIKGNFQRPGYCNLKYG*RSNSIV Trigger: AACAATGCTGTTTGATCTTCACCCGTATTTCAGATT...GCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAGGTCTCCTCCCATAGCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	CTTCTCCCAAAGCTGGGTAACAGAAATTCTATGCACCGTCTCACATTCAAGGTTCTATGGGAGGAGACCTaGTTAAAGGGAATTTCCAGC	+
Preference number: 2 (lower is better) Translates to: LLPKLGNRNSMHRLTFKVLWEET*LKGISS Trigger: GCTGGAAATTCCCTTTAATCAGGTCTCCTCCCATAG...AACCTTGAATGTGAGACGGTGCATAGAATTTCTGTTACCCAGCTTTGGGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	CTATCTTACCATTCTCATGATCTGAGACCATTATTACGGCTATGGGAGGAGACCAGTCTGAGTACACACTaGTCTGCAGTGATCTCTAGG	+
Preference number: 2 (lower is better) Translates to: LSYHSHDLRPLLRLWEETSLSTH*SAVISR Trigger: CCTAGAGATCACTGCAGACCAGTGTGTACTCAGACT...GGTCTCCTCCCATAGCCGTAATAATGGTCTCAGATCATGAGAATGGTAAGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	TACTACATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGCCAGGCTATTGCTGGTaGTGGACCACAGGCTGTCTG	+
Preference number: 2 (lower is better) Translates to: YYISLQKDSDLQKRHQKLPGYCW*WTTGCL Trigger: CAGACAGCCTGTGGTCCACCACCAGCAATAGCCTGG...CAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATATGTAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	GAGAGAATGAAATTATACCTTCAAGCTGGAAGAGTTCTGGAGACAGACAAACTCTTATGCAGGGGGCTGTaGGGCTACAAGACATCCTTT	+
Preference number: 2 (lower is better) Translates to: ERMKLYLQAGRVLETDKLLCRGL*GYKTSF Trigger: AAAGGATGTCTTGTAGCCTCACAGCCCCCTGCATAA...GAGTTTGTCTGTCTCCAGAACTCTTCCAGCTTGAAGGTATAATTTCATTCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ATAAGGGGATCTGGAAAGGGATTCTTGCTTCAAATGAAGCAACATACTGACTGTTTATGCAGGGGGCTGTaGGGCTACAAGACATCCTTT	+
Preference number: 2 (lower is better) Translates to: IRGSGKGFLLQMKQHTDCLCRGL*GYKTSF Trigger: AAAGGATGTCTTGTAGCCTCACAGCCCCCTGCATAA...ACAGTCAGTATGTTGCTTCATTTGAAGCAAGAATCCCTTTCCAGATCCCCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	CTTCTCCCAAAGCTGGGTAACAGAAATTCTATGCACCGTCTCACATTCAAGGTTATAGTAGCCACCAAATaGATCTTTGGCGCTGACACT	+
Preference number: 2 (lower is better) Translates to: LLPKLGNRNSMHRLTFKVIVATK*IFGADT Trigger: AGTGTCAGCGCCAAAGATTCATTTGGTGGCTACTAT...AACCTTGAATGTGAGACGGTGCATAGAATTTCTGTTACCCAGCTTTGGGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	CTATCTTACCATTCTCATGATCTGAGACCATTATTACGGCTATGGGAGGAGACCATAGTAGCCACCAAATaGATCTTTGGCGCTGACACT	+
Preference number: 2 (lower is better) Translates to: LSYHSHDLRPLLRLWEETIVATK*IFGADT Trigger: AGTGTCAGCGCCAAAGATTCATTTGGTGGCTACTAT...GGTCTCCTCCCATAGCCGTAATAATGGTCTCAGATCATGAGAATGGTAAGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR GCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGAACAATTGGATTAACTTaGCTACATACAGTAGTGTTG	+
Preference number: 2 (lower is better) Translates to: TGSHCVALTGLELAMETRTIGLT*LHTVVL Trigger: CAACACTACTGTATGTAGGCAAGTTAATCCAATTGT...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	CTTCTCCCAAAGCTGGGTAACAGAAATTCTATGCACCGTCTCACATTCAAGGTTCCTGATAAGGGGATCTaGAAAGGGATTCTTGCTTCA	+
Preference number: 2 (lower is better) Translates to: LLPKLGNRNSMHRLTFKVPDKGI*KGILAS Trigger: TGAAGCAAGAATCCCTTTCCAGATCCCCTTATCAGG...AACCTTGAATGTGAGACGGTGCATAGAATTTCTGTTACCCAGCTTTGGGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCACGTCCAGGCTATTGCTaGTGGTGGACCACAGGCTGT	+
Preference number: 2 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSRPGYC*WWTTGC Trigger: ACAGCCTGTGGTCCACCACCAGCAATAGCCTGGACG...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	AATGAGGTAGAAGATAGCAATCTTCAGTATACTGATGCCTATTCAATTAGTCCCTTATGCAGGGGGCTGTaGGGCTACAAGACATCCTTT	+
Preference number: 2 (lower is better) Translates to: NEVEDSNLQYTDAYSISPLCRGL*GYKTSF Trigger: AAAGGATGTCTTGTAGCCTCACAGCCCCCTGCATAA...GGGACTAATTGAATAGGCATCAGTATACTGAAGATTGCTATCTTCTACCTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	CTATCTTACCATTCTCATGATCTGAGACCATTATTACGGCTATGGGAGGAGACCGATTCTTGCTTCAAATaGAGCAACATACTGACTGTC	+
Preference number: 2 (lower is better) Translates to: LSYHSHDLRPLLRLWEETDSCFK*SNILTV Trigger: GACAGTCAGTATGTTGCTTCATTTGAAGCAAGAATC...GGTCTCCTCCCATAGCCGTAATAATGGTCTCAGATCATGAGAATGGTAAGATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	GGGCGTATGTACAAGCAGAGTGAACTCAGAATCTCAGGTTTATTCTTCTCCCAAGATTCTTGCTTCAAATaGAGCAACATACTGACTGTC	+
Preference number: 2 (lower is better) Translates to: GRMYKQSELRISGLFFSQDSCFK*SNILTV Trigger: GACAGTCAGTATGTTGCTTCATTTGAAGCAAGAATC...TTGGGAGAAGAATAAACCTGAGATTCTGAGTTCACTCTGCTTGTACATACGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	AAGCTAAGACCCAACACCCCTCAATGTCATGTTAGTACTAACATGGTTTTATCCATAGTAGCCACCAAATaGATCTTTGGCGCTGACACT	+
Preference number: 2 (lower is better) Translates to: KLRPNTPQCHVSTNMVLSIVATK*IFGADT Trigger: AGTGTCAGCGCCAAAGATTCATTTGGTGGCTACTAT...GGATAAAACCATGTTAGTACTAACATGACATTGAGGGGTGTTGGGTCTTAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	CTTCTCCCAAAGCTGGGTAACAGAAATTCTATGCACCGTCTCACATTCAAGGTTCCACTGGTTATCAGGTaGATTAGATCAACATTCCTA	+
Preference number: 2 (lower is better) Translates to: LLPKLGNRNSMHRLTFKVPLVIR*IRSTFL Trigger: TAGGAATGTTGATCTAATTCACCTGATAACCAGTGG...AACCTTGAATGTGAGACGGTGCATAGAATTTCTGTTACCCAGCTTTGGGAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	CTTCTCCCAAAGCTGGGTAACAGAAATTCTATGCACCGTCTCACATTCAAGGTTACCATTCTCATGATCTaGGACCATTATTACGGCTAT	+
Preference number: 2 (lower is better) Translates to: LLPKLGNRNSMHRLTFKVTILMI*DHYYGY Trigger: ATAGCCGTAATAATGGTCTCAGATCATGAGAATGGT...AACCTTGAATGTGAGACGGTGCATAGAATTTCTGTTACCCAGCTTTGGGAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	CTTCTCCCAAAGCTGGGTAACAGAAATTCTATGCACCGTCTCACATTCAAGGTTTACAATCCTGTGAGCTaGAAACTGTCTAGTATTCTC	+
Preference number: 2 (lower is better) Translates to: LLPKLGNRNSMHRLTFKVYNPVS*KLSSIL Trigger: GAGAATACTAGACAGTTTTCAGCTCACAGGATTGTA...AACCTTGAATGTGAGACGGTGCATAGAATTTCTGTTACCCAGCTTTGGGAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	CTTCTCCCAAAGCTGGGTAACAGAAATTCTATGCACCGTCTCACATTCAAGGTTGTAGTTACAATCCTGTaGGCTGAAAACTGTCTAGTA	+
Preference number: 2 (lower is better) Translates to: LLPKLGNRNSMHRLTFKVVVTIL*AENCLV Trigger: TACTAGACAGTTTTCAGCTCACAGGATTGTAACTAC...AACCTTGAATGTGAGACGGTGCATAGAATTTCTGTTACCCAGCTTTGGGAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR GCA 90 bp	AAGCTAAGACCCAACACCCCTCAATGTCATGTTAGTACTAACATGGTTTTATCCATATGCTGTCTTCACTaGCTCCAGTGTTATCATGGG	+
Preference number: 2 (lower is better) Translates to: KLRPNTPQCHVSTNMVLSICCLH*LQCYHG Trigger: CCCATGATAACACTGGAGGCAGTGAAGACAGCATAT...GGATAAAACCATGTTAGTACTAACATGACATTGAGGGGTGTTGGGTCTTAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	CTATCTTACCATTCTCATGATCTGAGACCATTATTACGGCTATGGGAGGAGACCATTATACCTTCAAGCTaGAAGAGTTCTGGAGACAGA	+
Preference number: 2 (lower is better) Translates to: LSYHSHDLRPLLRLWEETIIPSS*KSSGDR Trigger: TCTGTCTCCAGAACTCTTCCAGCTTGAAGGTATAAT...GGTCTCCTCCCATAGCCGTAATAATGGTCTCAGATCATGAGAATGGTAAGATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCATTATGCAGGGGGCTGTaGGGCTACAAGACATCCTTT	+
Preference number: 2 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSLCRGL*GYKTSF Trigger: AAAGGATGTCTTGTAGCCTCACAGCCCCCTGCATAA...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	AAGCTAAGACCCAACACCCCTCAATGTCATGTTAGTACTAACATGGTTTTATCCAGTCCCCAGAGAGAATaGAATTATACCTTCAAGCTG	+
Preference number: 2 (lower is better) Translates to: KLRPNTPQCHVSTNMVLSSPQRE*NYTFKL Trigger: CAGCTTGAAGGTATAATTTCATTCTCTCTGGGGACT...GGATAAAACCATGTTAGTACTAACATGACATTGAGGGGTGTTGGGTCTTAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	ATCTCAATAACAGCCCCAGTGACTCAAAAGCATTGTAAATACGTGCTTTCCTTTCCTGATAAGGGGATCTaGAAAGGGATTCTTGCTTCA	+
Preference number: 2 (lower is better) Translates to: ISITAPVTQKHCKYVLSFPDKGI*KGILAS Trigger: TGAAGCAAGAATCCCTTTCCAGATCCCCTTATCAGG...AAAGGAAAGCACGTATTTACAATGCTTTTGAGTCACTGGGGCTGTTATTGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	AAGCTAAGACCCAACACCCCTCAATGTCATGTTAGTACTAACATGGTTTTATCCCCACTGGTTATCAGGTaGATTAGATCAACATTCCTA	+
Preference number: 2 (lower is better) Translates to: KLRPNTPQCHVSTNMVLSPLVIR*IRSTFL Trigger: TAGGAATGTTGATCTAATTCACCTGATAACCAGTGG...GGATAAAACCATGTTAGTACTAACATGACATTGAGGGGTGTTGGGTCTTAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	AAGCTAAGACCCAACACCCCTCAATGTCATGTTAGTACTAACATGGTTTTATCCACCATTCTCATGATCTaGGACCATTATTACGGCTAT	+
Preference number: 2 (lower is better) Translates to: KLRPNTPQCHVSTNMVLSTILMI*DHYYGY Trigger: ATAGCCGTAATAATGGTCTCAGATCATGAGAATGGT...GGATAAAACCATGTTAGTACTAACATGACATTGAGGGGTGTTGGGTCTTAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR GCA 90 bp	AATGAGGTAGAAGATAGCAATCTTCAGTATACTGATGCCTATTCAATTAGTCCCCAGCATTGTTCAATATaGTGTCTTCACTGCCTCCAG	+
Preference number: 2 (lower is better) Translates to: NEVEDSNLQYTDAYSISPQHCSI*CLHCLQ Trigger: CTGGAGGCAGTGAAGACAGCATATTGAACAATGCTG...GGGACTAATTGAATAGGCATCAGTATACTGAAGATTGCTATCTTCTACCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCAATAGTAGCCACCAAATaGATCTTTGGCGCTGACACT	+
Preference number: 2 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSIVATK*IFGADT Trigger: AGTGTCAGCGCCAAAGATTCATTTGGTGGCTACTAT...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR GCA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCAATATGCTGTCTTCACTaGCTCCAGTGTTATCATGGG	+
Preference number: 2 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSICCLH*LQCYHG Trigger: CCCATGATAACACTGGAGGCAGTGAAGACAGCATAT...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	ATCTCAATAACAGCCCCAGTGACTCAAAAGCATTGTAAATACGTGCTTTCCTTTATTATACCTTCAAGCTaGAAGAGTTCTGGAGACAGA	+
Preference number: 2 (lower is better) Translates to: ISITAPVTQKHCKYVLSFIIPSS*KSSGDR Trigger: TCTGTCTCCAGAACTCTTCCAGCTTGAAGGTATAAT...AAAGGAAAGCACGTATTTACAATGCTTTTGAGTCACTGGGGCTGTTATTGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	ATCTCAATAACAGCCCCAGTGACTCAAAAGCATTGTAAATACGTGCTTTCCTTTCGTTTTACTTTTCCCTaGAATGAGGTAGAAGATAGC	+
Preference number: 2 (lower is better) Translates to: ISITAPVTQKHCKYVLSFRFTFP*NEVEDS Trigger: GCTATCTTCTACCTCATTCCAGGGAAAAGTAAAACG...AAAGGAAAGCACGTATTTACAATGCTTTTGAGTCACTGGGGCTGTTATTGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCAAGTCCCCAGAGAGAATaGAATTATACCTTCAAGCTG	+
Preference number: 2 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSSPQRE*NYTFKL Trigger: CAGCTTGAAGGTATAATTTCATTCTCTCTGGGGACT...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	TACTACATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGAAGACATCTTTCAGATaGAATACACTCCTGGGTCAA	+
Preference number: 2 (lower is better) Translates to: YYISLQKDSDLQKRHQKLKTSFR*NTLLGQ Trigger: TTGACCCAGGAGTGTATTTCATCTGAAAGATGTCTT...CAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATATGTAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CCA 90 bp	CAACATTCCTACATAGACATGGCTATTTCTCCTATTTGTGTATCCTCTGAAGTACGTTTTACTTTTCCCTaGAATGAGGTAGAAGATAGC	+
Preference number: 2 (lower is better) Translates to: QHSYIDMAISPICVSSEVRFTFP*NEVEDS Trigger: GCTATCTTCTACCTCATTCCAGGGAAAAGTAAAACG...TACTTCAGAGGATACACAAATAGGAGAAATAGCCATGTCTATGTAGGAATGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CAA 90 bp	ATGCTTTGTATTGACGGCGTTTTAAAATTATACAATTGGATTAACTaGCCTACATACAGTAGTGTTGGCCTACATACAGTAGTGTTGGAC	+
Preference number: 2 (lower is better) Translates to: MLCIDGVLKLYNWIN*PTYSSVGLHTVVLD Trigger: GTCCAACACTACTGTATGTAGGCCAACACTACTGTATGTAGGCAAGTTAATCCAATTGTATAATTTTAAAACGCCGTCAATACAAAGCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCAGATTCTTGCTTCAAATaGAGCAACATACTGACTGTC	+
Preference number: 2 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSDSCFK*SNILTV Trigger: GACAGTCAGTATGTTGCTTCATTTGAAGCAAGAATC...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCAAAGACATCTTTCAGATaGAATACACTCCTGGGTCAA	+
Preference number: 2 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSKTSFR*NTLLGQ Trigger: TTGACCCAGGAGTGTATTTCATCTGAAAGATGTCTT...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR TCA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCATGGACATTATCTAAATaGGCAGCTCAAATCCCTAAG	+
Preference number: 2 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSWTLSK*AAQIPK Trigger: CTTAGGGATTTGAGCTGCTCATTTAGATAATGTCCA...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CCA 72 bp	TCAGGAGGCAAGCGGGTAGAAAGTCTGAGTACACACTaGTCTGCAGTGATCTCTAGGCCAGCCAGAGCTACA	+
Preference number: 3 (lower is better) Translates to: SGGKRVESLSTH*SAVISRPARAT Trigger: TGTAGCTCTGGCTGGCCTAGAGATCACTGCAGACCAGTGTGTACTCAGACTTTCTACCCGCTTGCCTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CAA 90 bp	GGGCGTATGTACAAGCAGAGTGAACTCAGAATCTCAGGTTTATTCTTCTCCCAACCAGCGTCCAGGCTATaGCTGGTGGTGGACCACAGG	+
Preference number: 3 (lower is better) Translates to: GRMYKQSELRISGLFFSQPASRL*LVVDHR Trigger: CCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGG...TTGGGAGAAGAATAAACCTGAGATTCTGAGTTCACTCTGCTTGTACATACGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CAA 90 bp	CTATCTTACCATTCTCATGATCTGAGACCATTATTACGGCTATGGGAGGAGACCCCAGCGTCCAGGCTATaGCTGGTGGTGGACCACAGG	+
Preference number: 3 (lower is better) Translates to: LSYHSHDLRPLLRLWEETPASRL*LVVDHR Trigger: CCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGG...GGTCTCCTCCCATAGCCGTAATAATGGTCTCAGATCATGAGAATGGTAAGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR GCA 72 bp	GACCTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTaGTGGTGGTGGACCACAGGCTGTCTGTGTCACAAA	+
Preference number: 3 (lower is better) Translates to: DLIKGNFQRPGY*WWWTTGCLCHK Trigger: TTTGTGACACAGACAGCCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CCA 72 bp	CTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCTaGTGGTGGACCACAGGCTGTCTGTGTCACAAAGAC	+
Preference number: 3 (lower is better) Translates to: LIKGNFQRPGYC*WWTTGCLCHKD Trigger: GTCTTTGTGACACAGACAGCCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CAA 90 bp	AAGCTAAGACCCAACACCCCTCAATGTCATGTTAGTACTAACATGGTTTTATCCCCAGCGTCCAGGCTATaGCTGGTGGTGGACCACAGG	+
Preference number: 3 (lower is better) Translates to: KLRPNTPQCHVSTNMVLSPASRL*LVVDHR Trigger: CCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGG...GGATAAAACCATGTTAGTACTAACATGACATTGAGGGGTGTTGGGTCTTAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CCA 72 bp	AAAGGGAATTTCCAGCGTCCAGGCTATTGCTGGTGGTaGACCACAGGCTGTCTGTGTCACAAAGACATCTTT	+
Preference number: 3 (lower is better) Translates to: KGNFQRPGYCWW*TTGCLCHKDIF Trigger: AAAGATGTCTTTGTGACACAGACAGCCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGGAAATTCCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CCA 72 bp	ATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCTGGTaGTGGACCACAGGCTGTCTGTGTCACAAAGACATC	+
Preference number: 3 (lower is better) Translates to: IKGNFQRPGYCW*WTTGCLCHKDI Trigger: GATGTCTTTGTGACACAGACAGCCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGGAAATTCCCTTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR GCA 72 bp	AGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTaGTATGGAGACCAGAATTTCCAGAAATGCACCTGT	+
Preference number: 3 (lower is better) Translates to: RFSLCSSDWPGT*YGDQNFQKCTC Trigger: ACAGGTGCATTTCTGGAAATTCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 72 bp	GATCTGAGACCATTATTACGGCTATGGGAGGAGACCTaGTTAAAGGGAATTTCCAGCGTCCAGGCTATTGCT	+
Preference number: 3 (lower is better) Translates to: DLRPLLRLWEET*LKGISSVQAIA Trigger: AGCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAGGTCTCCTCCCATAGCCGTAATAATGGTCTCAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CAA 90 bp	ACGGCTATGGGAGGAGACCTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCCTTTCACATAAGCTATaGATCAGACATCAACAAGGA	+
Preference number: 3 (lower is better) Translates to: TAMGGDLIKGNFQRPGYCLSHKL*IRHQQG Trigger: TCCTTGTTGATGTCTGATCAATAGCTTATGTGAAAG...GCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAGGTCTCCTCCCATAGCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 72 bp	ACCAGAATTTCCAGAAATGCACCTGTCACTGCCTCCTaGGTGCTGGTATTAAAGTCAAAAGCCACTACACCT	+
Preference number: 3 (lower is better) Translates to: TRISRNAPVTAS*VLVLKSKATTP Trigger: AGGTGTAGTGGCTTTTGACTTTAATACCAGCACTCAGGAGGCAGTGACAGGTGCATTTCTGGAAATTCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR GCA 72 bp	TATGGAGACCAGAATTTCCAGAAATGCACCTGTCACTaGCTCCTGAGTGCTGGTATTAAAGTCAAAAGCCAC	+
Preference number: 3 (lower is better) Translates to: YGDQNFQKCTCH*LLSAGIKVKSH Trigger: GTGGCTTTTGACTTTAATACCAGCACTCAGGAGGCAGTGACAGGTGCATTTCTGGAAATTCTGGTCTCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 72 bp	CACACTATCCGTCATAGGGCGTATGTACAAGCAGAGTaGACTCAGAATCTCAGGTTTATTCTTCTCCCAAAG	+
Preference number: 3 (lower is better) Translates to: HTIRHRAYVQAE*TQNLRFILLPK Trigger: CTTTGGGAGAAGAATAAACCTGAGATTCTGAGTTCACTCTGCTTGTACATACGCCCTATGACGGATAGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR GCA 72 bp	GAAATACGGGTGAAGATCAAACAGCATTGTTCAATATaGTGTCTTCACTGCCTCCAGTGTTATCATGGGTCC	+
Preference number: 3 (lower is better) Translates to: EIRVKIKQHCSI*CLHCLQCYHGS Trigger: GGACCCATGATAACACTGGAGGCAGTGAAGACAGCATATTGAACAATGCTGTTTGATCTTCACCCGTATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CCA 72 bp	TTAGTCCCCAGAGAGAATGAAATTATACCTTCAAGCTaGAAGAGTTCTGGAGACAGACAAACTCCTAGCCTC	+
Preference number: 3 (lower is better) Translates to: LVPRENEIIPSS*KSSGDRQTPSL Trigger: GAGGCTAGGAGTTTGTCTGTCTCCAGAACTCTTCCAGCTTGAAGGTATAATTTCATTCTCTCTGGGGACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 72 bp	TCTTTTAATAAACATGAGGCAGCACAGCACACCCACTaGGGATTCTACCTTGTGGTTTACAGCACACACTAT	+
Preference number: 3 (lower is better) Translates to: SFNKHEAAQHTH*GFYLVVYSTHY Trigger: ATAGTGTGTGCTGTAAACCACAAGGTAGAATCCTCAGTGGGTGTGCTGTGCTGCCTCATGTTTATTAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CCA 72 bp	CTATTATTAGTCTCAGAATTCGAGCTGCCACTGTCTTaGAATGACCAACACTCAGCTCCATTTATGAGTGAG	+
Preference number: 3 (lower is better) Translates to: LLLVSEFELPLS*NDQHSAPFMSE Trigger: CTCACTCATAAATGGAGCTGAGTGTTGGTCATTCCAAGACAGTGGCAGCTCGAATTCTGAGACTAATAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR GCA 72 bp	AAGATCAAACAGCATTGTTCAATATGCTGTCTTCACTaGCTCCAGTGTTATCATGGGTCCTTTCACATAAGC	+
Preference number: 3 (lower is better) Translates to: KIKQHCSICCLH*LQCYHGSFHIS Trigger: GCTTATGTGAAAGGACCCATGATAACACTGGAGGCAGTGAAGACAGCATATTGAACAATGCTGTTTGATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CCA 72 bp	TATGCACCGTCTCACATTCAAGGTTCTTTGCCTAACTaGCTCCTTAGAAGGCCTTTAAAATCAACAGCTTTT	+
Preference number: 3 (lower is better) Translates to: YAPSHIQGSLPN*LLRRPLKSTAF Trigger: AAAAGCTGTTGATTTTAAAGGCCTTCTAAGGAGCCAGTTAGGCAAAGAACCTTGAATGTGAGACGGTGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CCA 72 bp	GAACTCAGAATCTCAGGTTTATTCTTCTCCCAAAGCTaGGTAACAGAAATTCTATGCACCGTCTCACATTCA	+
Preference number: 3 (lower is better) Translates to: ELRISGLFFSQS*VTEILCTVSHS Trigger: TGAATGTGAGACGGTGCATAGAATTTCTGTTACCCAGCTTTGGGAGAAGAATAAACCTGAGATTCTGAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CAA 90 bp	CTTCTCCCAAAGCTGGGTAACAGAAATTCTATGCACCGTCTCACATTCAAGGTTGAAGATCAAACAGCATaGTTCAATATGCTGTCTTCA	+
Preference number: 3 (lower is better) Translates to: LLPKLGNRNSMHRLTFKVEDQTA*FNMLSS Trigger: TGAAGACAGCATATTGAACAATGCTGTTTGATCTTC...AACCTTGAATGTGAGACGGTGCATAGAATTTCTGTTACCCAGCTTTGGGAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 72 bp	CAATCATCGGAGTCAATGCACAATCTGAAATACGGGTaGAGATCAAACAGCATTGTTCAATATGCTGTCTTC	+
Preference number: 3 (lower is better) Translates to: QSSESMHNLKYG*RSNSIVQYAVF Trigger: GAAGACAGCATATTGAACAATGCTGTTTGATCTTCACCCGTATTTCAGATTGTGCATTGACTCCGATGATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 72 bp	GCTACCATAATGTCAGACTTCCCACTGGTTATCAGGTaGATTAGATCAACATTCCTACATAGACATGGCTAT	+
Preference number: 3 (lower is better) Translates to: ATIMSDFPLVIR*IRSTFLHRHGY Trigger: ATAGCCATGTCTATGTAGGAATGTTGATCTAATTCACCTGATAACCAGTGGGAAGTCTGACATTATGGTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CAA 90 bp	ATAAGGGGATCTGGAAAGGGATTCTTGCTTCAAATGAAGCAACATACTGACTGTCTTTCACATAAGCTATaGATCAGACATCAACAAGGA	+
Preference number: 3 (lower is better) Translates to: IRGSGKGFLLQMKQHTDCLSHKL*IRHQQG Trigger: TCCTTGTTGATGTCTGATCAATAGCTTATGTGAAAG...ACAGTCAGTATGTTGCTTCATTTGAAGCAAGAATCCCTTTCCAGATCCCCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CAA 90 bp	AAGCTAAGACCCAACACCCCTCAATGTCATGTTAGTACTAACATGGTTTTATCCGAAGATCAAACAGCATaGTTCAATATGCTGTCTTCA	+
Preference number: 3 (lower is better) Translates to: KLRPNTPQCHVSTNMVLSEDQTA*FNMLSS Trigger: TGAAGACAGCATATTGAACAATGCTGTTTGATCTTC...GGATAAAACCATGTTAGTACTAACATGACATTGAGGGGTGTTGGGTCTTAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CAA 90 bp	ATCTCAATAACAGCCCCAGTGACTCAAAAGCATTGTAAATACGTGCTTTCCTTTTCTGGAAAGGGATTCTaGCTTCAAATGAAGCAACAT	+
Preference number: 3 (lower is better) Translates to: ISITAPVTQKHCKYVLSFSGKGF*LQMKQH Trigger: ATGTTGCTTCATTTGAAGCAAGAATCCCTTTCCAGA...AAAGGAAAGCACGTATTTACAATGCTTTTGAGTCACTGGGGCTGTTATTGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 72 bp	TATACTGATGCCTATTCAATTAGTCCCCAGAGAGAATaGAATTATACCTTCAAGCTGGAAGAGTTCTGGAGA	+
Preference number: 3 (lower is better) Translates to: YTDAYSISPQRE*NYTFKLEEFWR Trigger: TCTCCAGAACTCTTCCAGCTTGAAGGTATAATTTCATTCTCTCTGGGGACTAATTGAATAGGCATCAGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 72 bp	CATAGACATGGCTATTTCTCCTATTTGTGTATCCTCTaGAGTACTTACTCAAACGTTAAGCAGTGTCAGAAG	+
Preference number: 3 (lower is better) Translates to: HRHGYFSYLCIL*STYSNVKQCQK Trigger: CTTCTGACACTGCTTAACGTTTGAGTAAGTACTTCAGAGGATACACAAATAGGAGAAATAGCCATGTCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR-3UTR CAA 90 bp	CAACATTCCTACATAGACATGGCTATTTCTCCTATTTGTGTATCCTCTGAAGTACTTTCACATAAGCTATaGATCAGACATCAACAAGGA	+
Preference number: 3 (lower is better) Translates to: QHSYIDMAISPICVSSEVLSHKL*IRHQQG Trigger: TCCTTGTTGATGTCTGATCAATAGCTTATGTGAAAG...TACTTCAGAGGATACACAAATAGGAGAAATAGCCATGTCTATGTAGGAATGTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR TCA 72 bp	ATTTCATTCTACCAAGATATACAAATTTGGCTCCACTaGCTGATAAGGAACATAGGAAAAATGTACACAGGT	+
Preference number: 3 (lower is better) Translates to: ISFYQDIQIWLH*LIRNIGKMYTG Trigger: ACCTGTGTACATTTTTCCTATGTTCCTTATCAGTCAGTGGAGCCAAATTTGTATATCTTGGTAGAATGAAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	ACGGCTATGGGAGGAGACCTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCGGAAGGACAGGACGGTaGCTGCGTGGACATCTCGGC	+
Preference number: 4 (lower is better) Translates to: TAMGGDLIKGNFQRPGYCGRTGR*LRGHLG Trigger: GCCGAGATGTCCACGCAGCCACCGTCCTGTCCTTCC...GCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAGGTCTCCTCCCATAGCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	CTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCTGGTGGTGGACCACAGGCAGAGGCAGGGCAAACTaGAGGACACGCAGGTCCAGC	+
Preference number: 4 (lower is better) Translates to: LIKGNFQRPGYCWWWTTGRGRAN*RTRRSS Trigger: GCTGGACCTGCGTGTCCTCCAGTTTGCCCTGCCTCT...GCCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	TGGCCTGGAACTTGCTATGGAGACCAGAATTTCCAGAAATGCACCTGTCACTGCAGAGGCAGGGCAAACTaGAGGACACGCAGGTCCAGC	+
Preference number: 4 (lower is better) Translates to: WPGTCYGDQNFQKCTCHCRGRAN*RTRRSS Trigger: GCTGGACCTGCGTGTCCTCCAGTTTGCCCTGCCTCT...GCAGTGACAGGTGCATTTCTGGAAATTCTGGTCTCCATAGCAAGTTCCAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	CTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCTGGTGGTGGACCACAGGCAAAAGATGGCCCAGATaGACGGAGAGAGGCTCACGG	+
Preference number: 4 (lower is better) Translates to: LIKGNFQRPGYCWWWTTGKRWPR*TERGSR Trigger: CCGTGAGCCTCTCTCCGTCCATCTGGGCCATCTTTT...GCCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR TCA 90 bp	TGGCCTGGAACTTGCTATGGAGACCAGAATTTCCAGAAATGCACCTGTCACTGCGGCAGCCTGCACTATTaGCCAGACACTTGGCCAGTT	+
Preference number: 4 (lower is better) Translates to: WPGTCYGDQNFQKCTCHCGSLHY*PDTWPV Trigger: AACTGGCCAAGTGTCTGGTCAATAGTGCAGGCTGCC...GCAGTGACAGGTGCATTTCTGGAAATTCTGGTCTCCATAGCAAGTTCCAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	CTATCTTACCATTCTCATGATCTGAGACCATTATTACGGCTATGGGAGGAGACCGGAAGGACAGGACGGTaGCTGCGTGGACATCTCGGC	+
Preference number: 4 (lower is better) Translates to: LSYHSHDLRPLLRLWEETGRTGR*LRGHLG Trigger: GCCGAGATGTCCACGCAGCCACCGTCCTGTCCTTCC...GGTCTCCTCCCATAGCCGTAATAATGGTCTCAGATCATGAGAATGGTAAGATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	AACTGCCCCTTCCACCTTTCAATCATCGGAGTCAATGCACAATCTGAAATACGGAGAGGCAGGGCAAACTaGAGGACACGCAGGTCCAGC	+
Preference number: 4 (lower is better) Translates to: NCPFHLSIIGVNAQSEIRRGRAN*RTRRSS Trigger: GCTGGACCTGCGTGTCCTCCAGTTTGCCCTGCCTCT...CCGTATTTCAGATTGTGCATTGACTCCGATGATTGAAAGGTGGAAGGGGCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	ACGGCTATGGGAGGAGACCTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCGAATGTCGATTTCAATaGCAGAGAGGCGGGACCGTG	+
Preference number: 4 (lower is better) Translates to: TAMGGDLIKGNFQRPGYCECRFQ*QRGGTV Trigger: CACGGTCCCGCCTCTCTGCCATTGAAATCGACATTC...GCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAGGTCTCCTCCCATAGCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGAGAATGTCGATTTCAATaGCAGAGAGGCGGGACCGTG	+
Preference number: 4 (lower is better) Translates to: TGSHCVALTGLELAMETRECRFQ*QRGGTV Trigger: CACGGTCCCGCCTCTCTGCCATTGAAATCGACATTC...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	TGGCCTGGAACTTGCTATGGAGACCAGAATTTCCAGAAATGCACCTGTCACTGCCACCAGGTGGCAGCCTaGACTATTGACCAGACACTT	+
Preference number: 4 (lower is better) Translates to: WPGTCYGDQNFQKCTCHCHQVAA*TIDQTL Trigger: AAGTGTCTGGTCAATAGTGCAGGCTGCCACCTGGTG...GCAGTGACAGGTGCATTTCTGGAAATTCTGGTCTCCATAGCAAGTTCCAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	CTTCTCCCAAAGCTGGGTAACAGAAATTCTATGCACCGTCTCACATTCAAGGTTAGAGGCAGGGCAAACTaGAGGACACGCAGGTCCAGC	+
Preference number: 4 (lower is better) Translates to: LLPKLGNRNSMHRLTFKVRGRAN*RTRRSS Trigger: GCTGGACCTGCGTGTCCTCCAGTTTGCCCTGCCTCT...AACCTTGAATGTGAGACGGTGCATAGAATTTCTGTTACCCAGCTTTGGGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR TCA 90 bp	CTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCTGGTGGTGGACCACAGGCCATAAACAGACCCCCTaGGCTAGCAATAGTGACAAA	+
Preference number: 4 (lower is better) Translates to: LIKGNFQRPGYCWWWTTGHKQTP*ASNSDK Trigger: TTTGTCACTATTGCTAGCTCAGGGGGTCTGTTTATG...GCCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	AAGCTAAGACCCAACACCCCTCAATGTCATGTTAGTACTAACATGGTTTTATCCGGAAGGACAGGACGGTaGCTGCGTGGACATCTCGGC	+
Preference number: 4 (lower is better) Translates to: KLRPNTPQCHVSTNMVLSGRTGR*LRGHLG Trigger: GCCGAGATGTCCACGCAGCCACCGTCCTGTCCTTCC...GGATAAAACCATGTTAGTACTAACATGACATTGAGGGGTGTTGGGTCTTAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	GGGCGTATGTACAAGCAGAGTGAACTCAGAATCTCAGGTTTATTCTTCTCCCAAACACGCAGGTCCAGCTaGTCAACCGACAGGTACCAC	+
Preference number: 4 (lower is better) Translates to: GRMYKQSELRISGLFFSQTRRSS*STDRYH Trigger: GTGGTACCTGTCGGTTGACCAGCTGGACCTGCGTGT...TTGGGAGAAGAATAAACCTGAGATTCTGAGTTCACTCTGCTTGTACATACGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	CTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCTGGTGGTGGACCACAGGCGGACAAAGACTTGCATaGACAATACCAAACGAACAG	+
Preference number: 4 (lower is better) Translates to: LIKGNFQRPGYCWWWTTGGQRLA*TIPNEQ Trigger: CTGTTCGTTTGGTATTGTGCATGCAAGTCTTTGTCC...GCCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	CTATCTTACCATTCTCATGATCTGAGACCATTATTACGGCTATGGGAGGAGACCAAAAGATGGCCCAGATaGACGGAGAGAGGCTCACGG	+
Preference number: 4 (lower is better) Translates to: LSYHSHDLRPLLRLWEETKRWPR*TERGSR Trigger: CCGTGAGCCTCTCTCCGTCCATCTGGGCCATCTTTT...GGTCTCCTCCCATAGCCGTAATAATGGTCTCAGATCATGAGAATGGTAAGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	ATAAGGGGATCTGGAAAGGGATTCTTGCTTCAAATGAAGCAACATACTGACTGTCCCCGCAAAGAGGCCTaGGACAGAGGCAATACCACA	+
Preference number: 4 (lower is better) Translates to: IRGSGKGFLLQMKQHTDCPRKEA*DRGNTT Trigger: TGTGGTATTGCCTCTGTCGCAGGCCTCTTTGCGGGG...ACAGTCAGTATGTTGCTTCATTTGAAGCAAGAATCCCTTTCCAGATCCCCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	CTATCTTACCATTCTCATGATCTGAGACCATTATTACGGCTATGGGAGGAGACCCACCAGGTGGCAGCCTaGACTATTGACCAGACACTT	+
Preference number: 4 (lower is better) Translates to: LSYHSHDLRPLLRLWEETHQVAA*TIDQTL Trigger: AAGTGTCTGGTCAATAGTGCAGGCTGCCACCTGGTG...GGTCTCCTCCCATAGCCGTAATAATGGTCTCAGATCATGAGAATGGTAAGATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	CAACATTCCTACATAGACATGGCTATTTCTCCTATTTGTGTATCCTCTGAAGTAGGAAGGACAGGACGGTaGCTGCGTGGACATCTCGGC	+
Preference number: 4 (lower is better) Translates to: QHSYIDMAISPICVSSEVGRTGR*LRGHLG Trigger: GCCGAGATGTCCACGCAGCCACCGTCCTGTCCTTCC...TACTTCAGAGGATACACAAATAGGAGAAATAGCCATGTCTATGTAGGAATGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	CTTCTCCCAAAGCTGGGTAACAGAAATTCTATGCACCGTCTCACATTCAAGGTTGAATGTCGATTTCAATaGCAGAGAGGCGGGACCGTG	+
Preference number: 4 (lower is better) Translates to: LLPKLGNRNSMHRLTFKVECRFQ*QRGGTV Trigger: CACGGTCCCGCCTCTCTGCCATTGAAATCGACATTC...AACCTTGAATGTGAGACGGTGCATAGAATTTCTGTTACCCAGCTTTGGGAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	GGGCGTATGTACAAGCAGAGTGAACTCAGAATCTCAGGTTTATTCTTCTCCCAAGAATGTCGATTTCAATaGCAGAGAGGCGGGACCGTG	+
Preference number: 4 (lower is better) Translates to: GRMYKQSELRISGLFFSQECRFQ*QRGGTV Trigger: CACGGTCCCGCCTCTCTGCCATTGAAATCGACATTC...TTGGGAGAAGAATAAACCTGAGATTCTGAGTTCACTCTGCTTGTACATACGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR TCA 90 bp	ATAAGGGGATCTGGAAAGGGATTCTTGCTTCAAATGAAGCAACATACTGACTGTGGCAGCCTGCACTATTaGCCAGACACTTGGCCAGTT	+
Preference number: 4 (lower is better) Translates to: IRGSGKGFLLQMKQHTDCGSLHY*PDTWPV Trigger: AACTGGCCAAGTGTCTGGTCAATAGTGCAGGCTGCC...ACAGTCAGTATGTTGCTTCATTTGAAGCAAGAATCCCTTTCCAGATCCCCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	TACTACATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGCCCCGCAAAGAGGCCTaGGACAGAGGCAATACCACA	+
Preference number: 4 (lower is better) Translates to: YYISLQKDSDLQKRHQKLPRKEA*DRGNTT Trigger: TGTGGTATTGCCTCTGTCGCAGGCCTCTTTGCGGGG...CAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATATGTAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	CAACATTCCTACATAGACATGGCTATTTCTCCTATTTGTGTATCCTCTGAAGTACCCCGCAAAGAGGCCTaGGACAGAGGCAATACCACA	+
Preference number: 4 (lower is better) Translates to: QHSYIDMAISPICVSSEVPRKEA*DRGNTT Trigger: TGTGGTATTGCCTCTGTCGCAGGCCTCTTTGCGGGG...TACTTCAGAGGATACACAAATAGGAGAAATAGCCATGTCTATGTAGGAATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CAA 72 bp	GAGCACTACCTGATAAGGGGATCTGGAAAGGGATTCTaGCTTCAAATGAAGCAACATACTGACTGTCTCCTG	+
Preference number: 4 (lower is better) Translates to: EHYLIRGSGKGF*LQMKQHTDCLL Trigger: CAGGAGACAGTCAGTATGTTGCTTCATTTGAAGCAAGAATCCCTTTCCAGATCCCCTTATCAGGTAGTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR TCA 90 bp	AATGAGGTAGAAGATAGCAATCTTCAGTATACTGATGCCTATTCAATTAGTCCCGGCAGCCTGCACTATTaGCCAGACACTTGGCCAGTT	+
Preference number: 4 (lower is better) Translates to: NEVEDSNLQYTDAYSISPGSLHY*PDTWPV Trigger: AACTGGCCAAGTGTCTGGTCAATAGTGCAGGCTGCC...GGGACTAATTGAATAGGCATCAGTATACTGAAGATTGCTATCTTCTACCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCACCCCGCAAAGAGGCCTaGGACAGAGGCAATACCACA	+
Preference number: 4 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSPRKEA*DRGNTT Trigger: TGTGGTATTGCCTCTGTCGCAGGCCTCTTTGCGGGG...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	ATCTCAATAACAGCCCCAGTGACTCAAAAGCATTGTAAATACGTGCTTTCCTTTCACCAGGTGGCAGCCTaGACTATTGACCAGACACTT	+
Preference number: 4 (lower is better) Translates to: ISITAPVTQKHCKYVLSFHQVAA*TIDQTL Trigger: AAGTGTCTGGTCAATAGTGCAGGCTGCCACCTGGTG...AAAGGAAAGCACGTATTTACAATGCTTTTGAGTCACTGGGGCTGTTATTGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	AATGAGGTAGAAGATAGCAATCTTCAGTATACTGATGCCTATTCAATTAGTCCCAAAAGATGGCCCAGATaGACGGAGAGAGGCTCACGG	+
Preference number: 4 (lower is better) Translates to: NEVEDSNLQYTDAYSISPKRWPR*TERGSR Trigger: CCGTGAGCCTCTCTCCGTCCATCTGGGCCATCTTTT...GGGACTAATTGAATAGGCATCAGTATACTGAAGATTGCTATCTTCTACCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	TACTACATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGACATCAGGCAGTCACTaGTTCCATCATACCGGGCAC	+
Preference number: 4 (lower is better) Translates to: YYISLQKDSDLQKRHQKLTSGSH*FHHTGH Trigger: GTGCCCGGTATGATGGAAGCAGTGACTGCCTGATGT...CAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATATGTAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	GGGCGTATGTACAAGCAGAGTGAACTCAGAATCTCAGGTTTATTCTTCTCCCAAGGACAAAGACTTGCATaGACAATACCAAACGAACAG	+
Preference number: 4 (lower is better) Translates to: GRMYKQSELRISGLFFSQGQRLA*TIPNEQ Trigger: CTGTTCGTTTGGTATTGTGCATGCAAGTCTTTGTCC...TTGGGAGAAGAATAAACCTGAGATTCTGAGTTCACTCTGCTTGTACATACGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060947.14 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCAAAAAGATGGCCCAGATaGACGGAGAGAGGCTCACGG	+
Preference number: 4 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSKRWPR*TERGSR Trigger: CCGTGAGCCTCTCTCCGTCCATCTGGGCCATCTTTT...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	ATAAGGGGATCTGGAAAGGGATTCTTGCTTCAAATGAAGCAACATACTGACTGTGGCTGTTATAAAAGATaGCCCAGATGGACGGAGAGA	+
Preference number: 4 (lower is better) Translates to: IRGSGKGFLLQMKQHTDCGCYKR*PRWTER Trigger: TCTCTCCGTCCATCTGGGCCATCTTTTATAACAGCC...ACAGTCAGTATGTTGCTTCATTTGAAGCAAGAATCCCTTTCCAGATCCCCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	AAGCTAAGACCCAACACCCCTCAATGTCATGTTAGTACTAACATGGTTTTATCCGGCTGTTATAAAAGATaGCCCAGATGGACGGAGAGA	+
Preference number: 4 (lower is better) Translates to: KLRPNTPQCHVSTNMVLSGCYKR*PRWTER Trigger: TCTCTCCGTCCATCTGGGCCATCTTTTATAACAGCC...GGATAAAACCATGTTAGTACTAACATGACATTGAGGGGTGTTGGGTCTTAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCACACCAGGTGGCAGCCTaGACTATTGACCAGACACTT	+
Preference number: 4 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSHQVAA*TIDQTL Trigger: AAGTGTCTGGTCAATAGTGCAGGCTGCCACCTGGTG...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	ATCTCAATAACAGCCCCAGTGACTCAAAAGCATTGTAAATACGTGCTTTCCTTTGGCTGTTATAAAAGATaGCCCAGATGGACGGAGAGA	+
Preference number: 4 (lower is better) Translates to: ISITAPVTQKHCKYVLSFGCYKR*PRWTER Trigger: TCTCTCCGTCCATCTGGGCCATCTTTTATAACAGCC...AAAGGAAAGCACGTATTTACAATGCTTTTGAGTCACTGGGGCTGTTATTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CAA 72 bp	CAGAAATTCTATGCACCGTCTCACATTCAAGGTTCTTaGCCTAACTGGCTCCTTAGAAGGCCTTTAAAATCA	+
Preference number: 4 (lower is better) Translates to: QKFYAPSHIQGS*PNWLLRRPLKS Trigger: TGATTTTAAAGGCCTTCTAAGGAGCCAGTTAGGCAAAGAACCTTGAATGTGAGACGGTGCATAGAATTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	GAGAGAATGAAATTATACCTTCAAGCTGGAAGAGTTCTGGAGACAGACAAACTCGGACAAAGACTTGCATaGACAATACCAAACGAACAG	+
Preference number: 4 (lower is better) Translates to: ERMKLYLQAGRVLETDKLGQRLA*TIPNEQ Trigger: CTGTTCGTTTGGTATTGTGCATGCAAGTCTTTGTCC...GAGTTTGTCTGTCTCCAGAACTCTTCCAGCTTGAAGGTATAATTTCATTCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CCA 90 bp	AATGAGGTAGAAGATAGCAATCTTCAGTATACTGATGCCTATTCAATTAGTCCCGGCTGTTATAAAAGATaGCCCAGATGGACGGAGAGA	+
Preference number: 4 (lower is better) Translates to: NEVEDSNLQYTDAYSISPGCYKR*PRWTER Trigger: TCTCTCCGTCCATCTGGGCCATCTTTTATAACAGCC...GGGACTAATTGAATAGGCATCAGTATACTGAAGATTGCTATCTTCTACCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR TCA 90 bp	AATGAGGTAGAAGATAGCAATCTTCAGTATACTGATGCCTATTCAATTAGTCCCCATAAACAGACCCCCTaGGCTAGCAATAGTGACAAA	+
Preference number: 4 (lower is better) Translates to: NEVEDSNLQYTDAYSISPHKQTP*ASNSDK Trigger: TTTGTCACTATTGCTAGCTCAGGGGGTCTGTTTATG...GGGACTAATTGAATAGGCATCAGTATACTGAAGATTGCTATCTTCTACCTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR GCA 90 bp	TACTACATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGGGACAAAGACTTGCATaGACAATACCAAACGAACAG	+
Preference number: 4 (lower is better) Translates to: YYISLQKDSDLQKRHQKLGQRLA*TIPNEQ Trigger: CTGTTCGTTTGGTATTGTGCATGCAAGTCTTTGTCC...CAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATATGTAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
3UTR CAA 72 bp	ATTGACGGCGTTTTAAAATTATACAATTGGATTAACTaGCCTACATACAGTAGTGTTGGCCTACATACAGTA	+
Preference number: 4 (lower is better) Translates to: IDGVLKLYNWIN*PTYSSVGLHTV Trigger: TACTGTATGTAGGCCAACACTACTGTATGTAGGCAAGTTAATCCAATTGTATAATTTTAAAACGCCGTCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS GCA 90 bp	CCGCAGTTTCCTCCAGTTAGGAAGCAGAGTCCCCGCAAAGAGGCCTaGGACAGAGGCAATACCACACAGGAAGGACAGGACGGTGGCTGC	+
Preference number: 5 (lower is better) Translates to: PQFPPVRKQSPRKEA*DRGNTTQEGQDGGC Trigger: GCAGCCACCGTCCTGTCCTTCCTGTGTGGTATTGCCTCTGTCGCAGGCCTCTTTGCGGGGACTCTGCTTCCTAACTGGAGGAAACTGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS CCA 90 bp	ACGATGCTGAGAGGCAGGGCAAACTGGAGGACACGCAGGTCCAGCTaGTCAACCGACAGGTACCACGTACGGTCGTACATCAGGCAGTCA	+
Preference number: 5 (lower is better) Translates to: TMLRGRANWRTRRSS*STDRYHVRSYIRQS Trigger: TGACTGCCTGATGTACGACCGTACGTGGTACCTGTCGGTTGACCAGCTGGACCTGCGTGTCCTCCAGTTTGCCCTGCCTCTCAGCATCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS CCA 90 bp	AGCAAGGCACCCATTGCGATCACGATGCTGAGAGGCAGGGCAAACTaGAGGACACGCAGGTCCAGCTGGTCAACCGACAGGTACCACGTA	+
Preference number: 5 (lower is better) Translates to: SKAPIAITMLRGRAN*RTRRSSWSTDRYHV Trigger: TACGTGGTACCTGTCGGTTGACCAGCTGGACCTGCGTGTCCTCCAGTTTGCCCTGCCTCTCAGCATCGTGATCGCAATGGGTGCCTTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS TCA 90 bp	TTCCAATCAGGCAGAGTAGCAAGGCACCCATTGCGATCACGATGCTaGGAGGCAGGGCAAACTGGAGGACACGCAGGTCCAGCTGGTCAA	+
Preference number: 5 (lower is better) Translates to: FQSGRVARHPLRSRC*EAGQTGGHAGPAGQ Trigger: TTGACCAGCTGGACCTGCGTGTCCTCCAGTTTGCCCTGCCTCTCAGCATCGTGATCGCAATGGGTGCCTTGCTACTCTGCCTGATTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS GCA 90 bp	GGTCAACCGACAGGTACCACGTACGGTCGTACATCAGGCAGTCACTaGTTCCATCATACCGGGCACACTTCACCCACAGGCCCGTGTAAA	+
Preference number: 5 (lower is better) Translates to: GQPTGTTYGRTSGSH*FHHTGHTSPTGPCK Trigger: TTTACACGGGCCTGTGGGTGAAGTGTGCCCGGTATGATGGAAGCAGTGACTGCCTGATGTACGACCGTACGTGGTACCTGTCGGTTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	ACGGCTATGGGAGGAGACCTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCTGGCAGCCTGCACTATaGACCAGACACTTGGCCAGT	+
Preference number: 5 (lower is better) Translates to: TAMGGDLIKGNFQRPGYCWQPAL*TRHLAS Trigger: ACTGGCCAAGTGTCTGGTCAATAGTGCAGGCTGCCA...GCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAGGTCTCCTCCCATAGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	CTGATTAAAGGGAATTTCCAGCGTCCAGGCTATTGCTGGTGGTGGACCACAGGCGGAGAGGACAAAGACTaGCATGCACAATACCAAACG	+
Preference number: 5 (lower is better) Translates to: LIKGNFQRPGYCWWWTTGGEDKD*HAQYQT Trigger: CGTTTGGTATTGTGCATGCAAGTCTTTGTCCTCTCC...GCCTGTGGTCCACCACCAGCAATAGCCTGGACGCTGGAAATTCCCTTTAATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	TGGCCTGGAACTTGCTATGGAGACCAGAATTTCCAGAAATGCACCTGTCACTGCGTGAGAGTACAGCGGTaGCCAGAAAGGAGAGGACAA	+
Preference number: 5 (lower is better) Translates to: WPGTCYGDQNFQKCTCHCVRVQR*PERRGQ Trigger: TTGTCCTCTCCTTTCTGGCAACCGCTGTACTCTCAC...GCAGTGACAGGTGCATTTCTGGAAATTCTGGTCTCCATAGCAAGTTCCAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS GCA 90 bp	GTGAGAGTACAGCGGTTGCCAGAAAGGAGAGGACAAAGACTTGCATaGACAATACCAAACGAACAGCAGGAGAGCAGTCATAAACAGACC	+
Preference number: 5 (lower is better) Translates to: VRVQRLPERRGQRLA*TIPNEQQESSHKQT Trigger: GGTCTGTTTATGACTGCTCTCCTGCTGTTCGTTTGGTATTGTGCATGCAAGTCTTTGTCCTCTCCTTTCTGGCAACCGCTGTACTCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	ACAGGTTCTCACTGTGTAGCTCTGACTGGCCTGGAACTTGCTATGGAGACCAGATTCTTCTCGTTTCTGTaGAATGTGATCAGCCGCAGT	+
Preference number: 5 (lower is better) Translates to: TGSHCVALTGLELAMETRFFSFL*NVISRS Trigger: ACTGCGGCTGATCACATTCAACAGAAACGAGAAGAA...TCTGGTCTCCATAGCAAGTTCCAGGCCAGTCAGAGCTACACAGTGAGAACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	CTATCTTACCATTCTCATGATCTGAGACCATTATTACGGCTATGGGAGGAGACCTGGCAGCCTGCACTATaGACCAGACACTTGGCCAGT	+
Preference number: 5 (lower is better) Translates to: LSYHSHDLRPLLRLWEETWQPAL*TRHLAS Trigger: ACTGGCCAAGTGTCTGGTCAATAGTGCAGGCTGCCA...GGTCTCCTCCCATAGCCGTAATAATGGTCTCAGATCATGAGAATGGTAAGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	AACTGCCCCTTCCACCTTTCAATCATCGGAGTCAATGCACAATCTGAAATACGGCTATTGACCAGACACTaGGCCAGTTTGATGTTAGGC	+
Preference number: 5 (lower is better) Translates to: NCPFHLSIIGVNAQSEIRLLTRH*ASLMLG Trigger: GCCTAACATCAAACTGGCCAAGTGTCTGGTCAATAG...CCGTATTTCAGATTGTGCATTGACTCCGATGATTGAAAGGTGGAAGGGGCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	ATAAGGGGATCTGGAAAGGGATTCTTGCTTCAAATGAAGCAACATACTGACTGTTGGCAGCCTGCACTATaGACCAGACACTTGGCCAGT	+
Preference number: 5 (lower is better) Translates to: IRGSGKGFLLQMKQHTDCWQPAL*TRHLAS Trigger: ACTGGCCAAGTGTCTGGTCAATAGTGCAGGCTGCCA...ACAGTCAGTATGTTGCTTCATTTGAAGCAAGAATCCCTTTCCAGATCCCCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	AAGCTAAGACCCAACACCCCTCAATGTCATGTTAGTACTAACATGGTTTTATCCGTGAGAGTACAGCGGTaGCCAGAAAGGAGAGGACAA	+
Preference number: 5 (lower is better) Translates to: KLRPNTPQCHVSTNMVLSVRVQR*PERRGQ Trigger: TTGTCCTCTCCTTTCTGGCAACCGCTGTACTCTCAC...GGATAAAACCATGTTAGTACTAACATGACATTGAGGGGTGTTGGGTCTTAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	GAGAGAATGAAATTATACCTTCAAGCTGGAAGAGTTCTGGAGACAGACAAACTCGTGAGAGTACAGCGGTaGCCAGAAAGGAGAGGACAA	+
Preference number: 5 (lower is better) Translates to: ERMKLYLQAGRVLETDKLVRVQR*PERRGQ Trigger: TTGTCCTCTCCTTTCTGGCAACCGCTGTACTCTCAC...GAGTTTGTCTGTCTCCAGAACTCTTCCAGCTTGAAGGTATAATTTCATTCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS TCA 90 bp	ACAATACCAAACGAACAGCAGGAGAGCAGTCATAAACAGACCCCCTaGGCTAGCAATAGTGACAAATACTGCATAGTCAAAGGTAAAGAC	+
Preference number: 5 (lower is better) Translates to: TIPNEQQESSHKQTP*ASNSDKYCIVKGKD Trigger: GTCTTTACCTTTGACTATGCAGTATTTGTCACTATTGCTAGCTCAGGGGGTCTGTTTATGACTGCTCTCCTGCTGTTCGTTTGGTATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCATGGCAGCCTGCACTATaGACCAGACACTTGGCCAGT	+
Preference number: 5 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSWQPAL*TRHLAS Trigger: ACTGGCCAAGTGTCTGGTCAATAGTGCAGGCTGCCA...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	GAGAGAATGAAATTATACCTTCAAGCTGGAAGAGTTCTGGAGACAGACAAACTCTTCTTCTCGTTTCTGTaGAATGTGATCAGCCGCAGT	+
Preference number: 5 (lower is better) Translates to: ERMKLYLQAGRVLETDKLFFSFL*NVISRS Trigger: ACTGCGGCTGATCACATTCAACAGAAACGAGAAGAA...GAGTTTGTCTGTCTCCAGAACTCTTCCAGCTTGAAGGTATAATTTCATTCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	CAACATTCCTACATAGACATGGCTATTTCTCCTATTTGTGTATCCTCTGAAGTAGGAGAGGACAAAGACTaGCATGCACAATACCAAACG	+
Preference number: 5 (lower is better) Translates to: QHSYIDMAISPICVSSEVGEDKD*HAQYQT Trigger: CGTTTGGTATTGTGCATGCAAGTCTTTGTCCTCTCC...TACTTCAGAGGATACACAAATAGGAGAAATAGCCATGTCTATGTAGGAATGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	AATGAGGTAGAAGATAGCAATCTTCAGTATACTGATGCCTATTCAATTAGTCCCGGAGAGGACAAAGACTaGCATGCACAATACCAAACG	+
Preference number: 5 (lower is better) Translates to: NEVEDSNLQYTDAYSISPGEDKD*HAQYQT Trigger: CGTTTGGTATTGTGCATGCAAGTCTTTGTCCTCTCC...GGGACTAATTGAATAGGCATCAGTATACTGAAGATTGCTATCTTCTACCTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	AATGAGGTAGAAGATAGCAATCTTCAGTATACTGATGCCTATTCAATTAGTCCCTTCTTCTCGTTTCTGTaGAATGTGATCAGCCGCAGT	+
Preference number: 5 (lower is better) Translates to: NEVEDSNLQYTDAYSISPFFSFL*NVISRS Trigger: ACTGCGGCTGATCACATTCAACAGAAACGAGAAGAA...GGGACTAATTGAATAGGCATCAGTATACTGAAGATTGCTATCTTCTACCTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	CAACATTCCTACATAGACATGGCTATTTCTCCTATTTGTGTATCCTCTGAAGTATTCTTCTCGTTTCTGTaGAATGTGATCAGCCGCAGT	+
Preference number: 5 (lower is better) Translates to: QHSYIDMAISPICVSSEVFFSFL*NVISRS Trigger: ACTGCGGCTGATCACATTCAACAGAAACGAGAAGAA...TACTTCAGAGGATACACAAATAGGAGAAATAGCCATGTCTATGTAGGAATGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS-3UTR CAA 90 bp	ATATCTCTACAGAAAGACTCAGATTTGCAAAAGAGGCATCAGAAACTGTTATCAGGAGAGGACAAAGACTaGCATGCACAATACCAAACG	+
Preference number: 5 (lower is better) Translates to: ISLQKDSDLQKRHQKLLSGEDKD*HAQYQT Trigger: CGTTTGGTATTGTGCATGCAAGTCTTTGTCCTCTCC...TGATAACAGTTTCTGATGCCTCTTTTGCAAATCTGAGTCTTTCTGTAGAGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS CCA 72 bp	CCCATTGCGATCACGATGCTGAGAGGCAGGGCAAACTaGAGGACACGCAGGTCCAGCTGGTCAACCGACAGG	+
Preference number: 6 (lower is better) Translates to: PIAITMLRGRAN*RTRRSSWSTDR Trigger: CCTGTCGGTTGACCAGCTGGACCTGCGTGTCCTCCAGTTTGCCCTGCCTCTCAGCATCGTGATCGCAATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS TCA 72 bp	GGCAGAGTAGCAAGGCACCCATTGCGATCACGATGCTaGGAGGCAGGGCAAACTGGAGGACACGCAGGTCCA	+
Preference number: 6 (lower is better) Translates to: GRVARHPLRSRC*EAGQTGGHAGP Trigger: TGGACCTGCGTGTCCTCCAGTTTGCCCTGCCTCTCAGCATCGTGATCGCAATGGGTGCCTTGCTACTCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS CCA 72 bp	AGAGGCAGGGCAAACTGGAGGACACGCAGGTCCAGCTaGTCAACCGACAGGTACCACGTACGGTCGTACATC	+
Preference number: 6 (lower is better) Translates to: RGRANWRTRRSS*STDRYHVRSYI Trigger: GATGTACGACCGTACGTGGTACCTGTCGGTTGACCAGCTGGACCTGCGTGTCCTCCAGTTTGCCCTGCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS GCA 72 bp	CCTCCAGTTAGGAAGCAGAGTCCCCGCAAAGAGGCCTaGGACAGAGGCAATACCACACAGGAAGGACAGGAC	+
Preference number: 6 (lower is better) Translates to: PPVRKQSPRKEA*DRGNTTQEGQD Trigger: GTCCTGTCCTTCCTGTGTGGTATTGCCTCTGTCGCAGGCCTCTTTGCGGGGACTCTGCTTCCTAACTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS GCA 72 bp	ACAGGTACCACGTACGGTCGTACATCAGGCAGTCACTaGTTCCATCATACCGGGCACACTTCACCCACAGGC	+
Preference number: 6 (lower is better) Translates to: TGTTYGRTSGSH*FHHTGHTSPTG Trigger: GCCTGTGGGTGAAGTGTGCCCGGTATGATGGAAGCAGTGACTGCCTGATGTACGACCGTACGTGGTACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS CAA 90 bp	AGGAGTCCGGCCACCAGGTGGCAGCCTGCACTATTGACCAGACACTaGGCCAGTTTGATGTTAGGCACGGAAGAATTGAAGGCCGTGTTA	+
Preference number: 6 (lower is better) Translates to: RSPATRWQPALLTRH*ASLMLGTEELKAVL Trigger: TAACACGGCCTTCAATTCTTCCGTGCCTAACATCAAACTGGCCAAGTGTCTGGTCAATAGTGCAGGCTGCCACCTGGTGGCCGGACTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS CAA 72 bp	GTAAGTGTGCATCCCGGGAGCGTGAGAGTACAGCGGTaGCCAGAAAGGAGAGGACAAAGACTTGCATGCACA	+
Preference number: 6 (lower is better) Translates to: VSVHPGSVRVQR*PERRGQRLACT Trigger: TGTGCATGCAAGTCTTTGTCCTCTCCTTTCTGGCAACCGCTGTACTCTCACGCTCCCGGGATGCACACTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS CAA 72 bp	GCCACCAGGTGGCAGCCTGCACTATTGACCAGACACTaGGCCAGTTTGATGTTAGGCACGGAAGAATTGAAG	+
Preference number: 6 (lower is better) Translates to: ATRWQPALLTRH*ASLMLGTEELK Trigger: CTTCAATTCTTCCGTGCCTAACATCAAACTGGCCAAGTGTCTGGTCAATAGTGCAGGCTGCCACCTGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS CAA 90 bp	GCCACCAGGTGGCAGCCTGCACTATTGACCAGACACTTGGCCAGTTaGATGTTAGGCACGGAAGAATTGAAGGCCGTGTTACACATTCCA	+
Preference number: 6 (lower is better) Translates to: ATRWQPALLTRHLAS*MLGTEELKAVLHIP Trigger: TGGAATGTGTAACACGGCCTTCAATTCTTCCGTGCCTAACATCAAACTGGCCAAGTGTCTGGTCAATAGTGCAGGCTGCCACCTGGTGGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS GCA 72 bp	AGTACAGCGGTTGCCAGAAAGGAGAGGACAAAGACTTaGATGCACAATACCAAACGAACAGCAGGAGAGCAG	+
Preference number: 6 (lower is better) Translates to: STAVARKERTKT*MHNTKRTAGEQ Trigger: CTGCTCTCCTGCTGTTCGTTTGGTATTGTGCATGCAAGTCTTTGTCCTCTCCTTTCTGGCAACCGCTGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS CAA 72 bp	GAGTACAGCGGTTGCCAGAAAGGAGAGGACAAAGACTaGCATGCACAATACCAAACGAACAGCAGGAGAGCA	+
Preference number: 6 (lower is better) Translates to: EYSGCQKGEDKD*HAQYQTNSRRA Trigger: TGCTCTCCTGCTGTTCGTTTGGTATTGTGCATGCAAGTCTTTGTCCTCTCCTTTCTGGCAACCGCTGTACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS CAA 90 bp	CTATTGACCAGACACTTGGCCAGTTTGATGTTAGGCACGGAAGAATaGAAGGCCGTGTTACACATTCCAATCAGGCAGAGTAGCAAGGCA	+
Preference number: 6 (lower is better) Translates to: LLTRHLASLMLGTEE*KAVLHIPIRQSSKA Trigger: TGCCTTGCTACTCTGCCTGATTGGAATGTGTAACACGGCCTTCAATTCTTCCGTGCCTAACATCAAACTGGCCAAGTGTCTGGTCAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8
CDS CAA 72 bp	AGACACTTGGCCAGTTTGATGTTAGGCACGGAAGAATaGAAGGCCGTGTTACACATTCCAATCAGGCAGAGT	+
Preference number: 6 (lower is better) Translates to: RHLASLMLGTEE*KAVLHIPIRQS Trigger: ACTCTGCCTGATTGGAATGTGTAACACGGCCTTCAATTCTTCCGTGCCTAACATCAAACTGGCCAAGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060947.14 ENSMUST00000115445.8 ENSMUST00000115446.8 ENSMUST00000179804.8

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