Pregenerated sensors for CLDN10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022132Ensembl transcript IDs: ENSMUST00000047761.13, ENSMUST00000071546.14, ENSMUST00000100314.4
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCCCAGAGCTTCCTTAGCTGGCTTTAGATTCAGCCGCCACCAGTaGCCAGCTCAGCTAGTGGTCACATGCTCTCGCTCAGACAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GPRASLAGFRFSRHQ*PAQLVVTCSRSDKP Trigger: GGGCTTGTCTGAGCGAGAGCATGTGACCACTAGCTGAGCTGGCCACTGGTGGCGGCTGAATCTAAAGCCAGCTAAGGAAGCTCTGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CCA 90 bp | CCAGCTCAGCTAGTGGTCACATGCTCTCGCTCAGACAAGCCCGTGTaGTTTATGGTCCACACACAGGGCAAAGGCACCTTGGCCTCACCA | + |
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Preference number: 1 (lower is better) Translates to: PAQLVVTCSRSDKPV*FMVHTQGKGTLASP Trigger: TGGTGAGGCCAAGGTGCCTTTGCCCTGTGTGTGGACCATAAACCACACGGGCTTGTCTGAGCGAGAGCATGTGACCACTAGCTGAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR TCA 90 bp | CTGTCCCCTTCACACGACACCATCCATCGTCTGCACACTTGTGTTTaGTCTGTGGGTGGAACGAGGGAAGCTCTCAGCACATTAAGGATC | + |
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Preference number: 1 (lower is better) Translates to: LSPSHDTIHRLHTCV*SVGGTREALSTLRI Trigger: GATCCTTAATGTGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAAACACAAGTGTGCAGACGATGGATGGTGTCGTGTGAAGGGGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR TCA 90 bp | AGGGCAAAGGCACCTTGGCCTCACCAGCCCTTTCTTTGGCCATCATaGCAAATGACAGCCCTGACGGACAGAACCAAGAAACTAGAAATC | + |
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Preference number: 1 (lower is better) Translates to: RAKAPWPHQPFLWPS*QMTALTDRTKKLEI Trigger: GATTTCTAGTTTCTTGGTTCTGTCCGTCAGGGCTGTCATTTGTCATGATGGCCAAAGAAAGGGCTGGTGAGGCCAAGGTGCCTTTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CCA 90 bp | CTAGAAATCAACGACATGGCACATTGGTTGTGTGATTGTTTGACTTaGATACTGGATGAGGGGTCTGAGATTATCGCTGTCCCCTTCACA | + |
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Preference number: 1 (lower is better) Translates to: LEINDMAHWLCDCLT*ILDEGSEIIAVPFT Trigger: TGTGAAGGGGACAGCGATAATCTCAGACCCCTCATCCAGTATCCAAGTCAAACAATCACACAACCAATGTGCCATGTCGTTGATTTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CAA 90 bp | GTCCACACACAGGGCAAAGGCACCTTGGCCTCACCAGCCCTTTCTTaGGCCATCATGACAAATGACAGCCCTGACGGACAGAACCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: VHTQGKGTLASPALS*AIMTNDSPDGQNQE Trigger: TTCTTGGTTCTGTCCGTCAGGGCTGTCATTTGTCATGATGGCCAAAGAAAGGGCTGGTGAGGCCAAGGTGCCTTTGCCCTGTGTGTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CAA 90 bp | GACAAGCCCGTGTGGTTTATGGTCCACACACAGGGCAAAGGCACCTaGGCCTCACCAGCCCTTTCTTTGGCCATCATGACAAATGACAGC | + |
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Preference number: 2 (lower is better) Translates to: DKPVWFMVHTQGKGT*ASPALSLAIMTNDS Trigger: GCTGTCATTTGTCATGATGGCCAAAGAAAGGGCTGGTGAGGCCAAGGTGCCTTTGCCCTGTGTGTGGACCATAAACCACACGGGCTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAAGTCATGTAGTCAGCCATGTGACTCGTTGTGGGCGATTTATAGCATATGCCTTTGTGGGTAAGTaGCATGCAGGGCTGGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: WESHVVSHVTRCGRFIAYAFVGK*HAGLAS Trigger: TGAGGCCAGCCCTGCATGTCACTTACCCACAAAGGC...ATATGCTATAAATCGCCCACAACGAGTCACATGGCTGACTACATGACTTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCCTTTCCTTTCCGTTGAATCCCTGCAAACAGTGTCCTCTATTTCCTTTTTTCAGCCGCCACCAGTaGCCAGCTCAGCTAGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: PFLSFPLNPCKQCPLFPFFSRHQ*PAQLVV Trigger: GACCACTAGCTGAGCTGGCCACTGGTGGCGGCTGAA...AAAAGGAAATAGAGGACACTGTTTGCAGGGATTCAACGGAAAGGAAAGGAAAGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR-3UTR TCA 90 bp | ATCGTCTGCACACTTGTGTTTGATCTGTGGGTGGAACGAGGGAAGCTCTCAGCATTGGAAGGACTATTGTaGGGACAGTTCTCTTGCACA | + |
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Preference number: 2 (lower is better) Translates to: IVCTLVFDLWVERGKLSALEGLL*GQFSCT Trigger: TGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAA...TGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAAACACAAGTGTGCAGACGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR-3UTR CCA 90 bp | TTGATCTGTGGGTGGAACGAGGGAAGCTCTCAGCACATTAAGGATCCAGTGGCTATTACAGGAGAGCCTTaGAAGGACTATTGTGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LICGWNEGSSQHIKDPVAITGEP*KDYCED Trigger: GTCCTCACAATAGTCCTTCCAAGGCTCTCCTGTAAT...AGCCACTGGATCCTTAATGTGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCCTTTCCTTTCCGTTGAATCCCTGCAAACAGTGTCCTCTATTTCCTTTTCCTGATCAAGTTCCATaGCTTGAAAAATGGCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: PFLSFPLNPCKQCPLFPFPDQVP*LEKWPV Trigger: CACTGGCCATTTTTCAAGGCATGGAACTTGATCAGG...AAAAGGAAATAGAGGACACTGTTTGCAGGGATTCAACGGAAAGGAAAGGAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR GCA 72 bp | AGCCGCCACCAGTGGCCAGCTCAGCTAGTGGTCACATaGTCTCGCTCAGACAAGCCCGTGTGGTTTATGGTC | + |
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Preference number: 3 (lower is better) Translates to: SRHQWPAQLVVT*SRSDKPVWFMV Trigger: GACCATAAACCACACGGGCTTGTCTGAGCGAGAGCATGTGACCACTAGCTGAGCTGGCCACTGGTGGCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CCA 72 bp | TCACATGCTCTCGCTCAGACAAGCCCGTGTGGTTTATaGTCCACACACAGGGCAAAGGCACCTTGGCCTCAC | + |
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Preference number: 3 (lower is better) Translates to: SHALAQTSPCGL*STHRAKAPWPH Trigger: GTGAGGCCAAGGTGCCTTTGCCCTGTGTGTGGACCATAAACCACACGGGCTTGTCTGAGCGAGAGCATGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CCA 72 bp | GCTTCCTTAGCTGGCTTTAGATTCAGCCGCCACCAGTaGCCAGCTCAGCTAGTGGTCACATGCTCTCGCTCA | + |
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Preference number: 3 (lower is better) Translates to: ASLAGFRFSRHQ*PAQLVVTCSRS Trigger: TGAGCGAGAGCATGTGACCACTAGCTGAGCTGGCCACTGGTGGCGGCTGAATCTAAAGCCAGCTAAGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CCA 72 bp | CTAGTGGTCACATGCTCTCGCTCAGACAAGCCCGTGTaGTTTATGGTCCACACACAGGGCAAAGGCACCTTG | + |
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Preference number: 3 (lower is better) Translates to: LVVTCSRSDKPV*FMVHTQGKGTL Trigger: CAAGGTGCCTTTGCCCTGTGTGTGGACCATAAACCACACGGGCTTGTCTGAGCGAGAGCATGTGACCACTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR TCA 72 bp | TCACACGACACCATCCATCGTCTGCACACTTGTGTTTaGTCTGTGGGTGGAACGAGGGAAGCTCTCAGCACA | + |
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Preference number: 3 (lower is better) Translates to: SHDTIHRLHTCV*SVGGTREALST Trigger: TGTGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAAACACAAGTGTGCAGACGATGGATGGTGTCGTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR TCA 72 bp | GCACCTTGGCCTCACCAGCCCTTTCTTTGGCCATCATaGCAAATGACAGCCCTGACGGACAGAACCAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: APWPHQPFLWPS*QMTALTDRTKK Trigger: TTTCTTGGTTCTGTCCGTCAGGGCTGTCATTTGTCATGATGGCCAAAGAAAGGGCTGGTGAGGCCAAGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CCA 72 bp | GGAACGAGGGAAGCTCTCAGCACATTAAGGATCCAGTaGCTACCATTCCCTGAGCCTTATGAACTAAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: GTREALSTLRIQ*LPFPEPYELRV Trigger: TACCCTTAGTTCATAAGGCTCAGGGAATGGTAGCCACTGGATCCTTAATGTGCTGAGAGCTTCCCTCGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CCA 72 bp | CATCCATCGTCTGCACACTTGTGTTTGATCTGTGGGTaGAACGAGGGAAGCTCTCAGCACATTAAGGATCCA | + |
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Preference number: 3 (lower is better) Translates to: HPSSAHLCLICG*NEGSSQHIKDP Trigger: TGGATCCTTAATGTGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAAACACAAGTGTGCAGACGATGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR-3UTR CAA 90 bp | ACCTTGGCCTCACCAGCCCTTTCTTTGGCCATCATGACAAATGACAGCCCTGACTGGTTGTGTGATTGTTaGACTTGGATACTGGATGAG | + |
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Preference number: 3 (lower is better) Translates to: TLASPALSLAIMTNDSPDWLCDC*TWILDE Trigger: CTCATCCAGTATCCAAGTCAAACAATCACACAACCA...GTCAGGGCTGTCATTTGTCATGATGGCCAAAGAAAGGGCTGGTGAGGCCAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR TCA 72 bp | GTGCTAGTGAGAACAATTACTGCCTTTGTGGGTAAGTaGCATGCAGGGCTGGCCTCAGGAATTCACCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: VLVRTITAFVGK*HAGLASGIHLY Trigger: ATACAGGTGAATTCCTGAGGCCAGCCCTGCATGTCACTTACCCACAAAGGCAGTAATTGTTCTCACTAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CCA 72 bp | AACGACATGGCACATTGGTTGTGTGATTGTTTGACTTaGATACTGGATGAGGGGTCTGAGATTATCGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: NDMAHWLCDCLT*ILDEGSEIIAV Trigger: GACAGCGATAATCTCAGACCCCTCATCCAGTATCCAAGTCAAACAATCACACAACCAATGTGCCATGTCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CAA 72 bp | CAGGGCAAAGGCACCTTGGCCTCACCAGCCCTTTCTTaGGCCATCATGACAAATGACAGCCCTGACGGACAG | + |
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Preference number: 4 (lower is better) Translates to: QGKGTLASPALS*AIMTNDSPDGQ Trigger: CTGTCCGTCAGGGCTGTCATTTGTCATGATGGCCAAAGAAAGGGCTGGTGAGGCCAAGGTGCCTTTGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| CDS-3UTR CCA 90 bp | ACCTTGGCCTCACCAGCCCTTTCTTTGGCCATCATGACAAATGACAGCCCTGACCAGTGCCATCGATGGTaGAGACCTTCCAGTAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: TLASPALSLAIMTNDSPDQCHRW*RPSSSR Trigger: CCGACTACTGGAAGGTCTCCACCATCGATGGCACTG...GTCAGGGCTGTCATTTGTCATGATGGCCAAAGAAAGGGCTGGTGAGGCCAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CAA 72 bp | GTCCCCTTCACACGACACCATCCATCGTCTGCACACTaGTGTTTGATCTGTGGGTGGAACGAGGGAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VPFTRHHPSSAH*CLICGWNEGSS Trigger: AGAGCTTCCCTCGTTCCACCCACAGATCAAACACAAGTGTGCAGACGATGGATGGTGTCGTGTGAAGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| CDS-3UTR TCA 90 bp | ATCGTCTGCACACTTGTGTTTGATCTGTGGGTGGAACGAGGGAAGCTCTCAGCACTCCTGCCCATCCGATaGAGAGAGCAGCCCCTAATT | + |
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Preference number: 4 (lower is better) Translates to: IVCTLVFDLWVERGKLSALLPIR*REQPLI Trigger: AATTAGGGGCTGCTCTCTTCATCGGATGGGCAGGAG...TGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAAACACAAGTGTGCAGACGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| CDS-3UTR CCA 90 bp | GTGGGTGGAACGAGGGAAGCTCTCAGCACATTAAGGATCCAGTGGCTACCATTCCTCCGCCTTGATACTTaGTCCGAGAAGACATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VGGTREALSTLRIQWLPFLRLDT*SEKTWQ Trigger: CTGCCATGTCTTCTCGGACCAAGTATCAAGGCGGAG...GAATGGTAGCCACTGGATCCTTAATGTGCTGAGAGCTTCCCTCGTTCCACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| CDS-3UTR CCA 90 bp | GCACACTTGTGTTTGATCTGTGGGTGGAACGAGGGAAGCTCTCAGCACATTAAGAGTCGGTGGGCAGTGTaGAAGACACTAGCACCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AHLCLICGWNEGSSQHIKSRWAV*KTLAPS Trigger: GCTGGGTGCTAGTGTCTTCCACACTGCCCACCGACT...CTTAATGTGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAAACACAAGTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| 3UTR CAA 72 bp | TTCACACGACACCATCCATCGTCTGCACACTTGTGTTaGATCTGTGGGTGGAACGAGGGAAGCTCTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: FTRHHPSSAHLC*ICGWNEGSSQH Trigger: GTGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAAACACAAGTGTGCAGACGATGGATGGTGTCGTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| CDS-3UTR TCA 90 bp | ATCGTCTGCACACTTGTGTTTGATCTGTGGGTGGAACGAGGGAAGCTCTCAGCACGAAAAATCCCAGGCTaGCCGCAGCGATCATTAGTC | + |
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Preference number: 4 (lower is better) Translates to: IVCTLVFDLWVERGKLSARKIPG*PQRSLV Trigger: GACTAATGATCGCTGCGGTCAGCCTGGGATTTTTCG...TGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAAACACAAGTGTGCAGACGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| CDS-3UTR GCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCGCCCAGAGCGTTACCTaGGCAGTTCATCCACAGACC | + |
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Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSAQSVT*AVHPQT Trigger: GGTCTGTGGATGAACTGCGCAGGTAACGCTCTGGGC...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
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| CDS-3UTR TCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCCTCCTGCCCATCCGATaGAGAGAGCAGCCCCTAATT | + |
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Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSLLPIR*REQPLI Trigger: AATTAGGGGCTGCTCTCTTCATCGGATGGGCAGGAG...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000100314.4 |
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| CDS-3UTR CCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCCAGACGACGCTCGGGTaGTCACTTTCCATTCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSQTTLG*SLSIRW Trigger: CCAACGAATGGAAAGTGACCACCCGAGCGTCGTCTG...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
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| CDS-3UTR CCA 90 bp | ATCGTCTGCACACTTGTGTTTGATCTGTGGGTGGAACGAGGGAAGCTCTCAGCAAAGACATGGCAGACGTaGGTCCGTTGTATGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: IVCTLVFDLWVERGKLSAKTWQT*VRCMCS Trigger: GCTACACATACAACGGACCCACGTCTGCCATGTCTT...TGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAAACACAAGTGTGCAGACGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| CDS-3UTR CCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCTGGTCCGAGAAGACATaGCAGACGTGGGTCCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSWSEKT*QTWVRC Trigger: ACAACGGACCCACGTCTGCCATGTCTTCTCGGACCA...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS-3UTR CCA 90 bp | CCTGACGGACAGAACCAAGAAACTAGAAATCAACGACATGGCACATTGGTTGTGGGAACTCCTTGCAGTTaGCGACACCGGTGGAATCGG | + |
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Preference number: 4 (lower is better) Translates to: PDGQNQETRNQRHGTLVVGTPCS*RHRWNR Trigger: CCGATTCCACCGGTGTCGCCAACTGCAAGGAGTTCC...CACAACCAATGTGCCATGTCGTTGATTTCTAGTTTCTTGGTTCTGTCCGTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| CDS-3UTR TCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGACCACACACCAGAGCTaGGATCTGTGCCCTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQTTHQS*DLCPGH Trigger: ATGTCCAGGGCACAGATCTCAGCTCTGGTGTGTGGT...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
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| CDS-3UTR TCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCCGAAAAATCCCAGGCTaGCCGCAGCGATCATTAGTC | + |
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Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSRKIPG*PQRSLV Trigger: GACTAATGATCGCTGCGGTCAGCCTGGGATTTTTCG...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS-3UTR TCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCTCTCCTTCTCCGCCTTaGTACTTGGTCCGAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSSPSPP*YLVRED Trigger: GTCTTCTCGGACCAAGTATCAAGGCGGAGAAGGAGA...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS-3UTR CCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCATTCGTTGGATGTGGTaGCAGCGACGAGAGCACCAA | + |
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Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSIRWMW*QRREHQ Trigger: TTGGTGCTCTCGTCGCTGCCACCACATCCAACGAAT...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
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| CDS-3UTR CCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGAAATGTGGCCGGCAGTaGAAGGAGCCCAGAGCGTTA | + |
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Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQKCGRQ*KEPRAL Trigger: TAACGCTCTGGGCTCCTTCCACTGCCGGCCACATTT...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
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| CDS-3UTR CCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGTGGTCCGAGAAGACATaGCAGACGTGGGTCCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQWSEKT*QTWVRC Trigger: ACAACGGACCCACGTCTGCCATGTCTTCTCGGACCA...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS-3UTR CCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCCTCCGCCTTGATACTTaGTCCGAGAAGACATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSLRLDT*SEKTWQ Trigger: CTGCCATGTCTTCTCGGACCAAGTATCAAGGCGGAG...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS-3UTR TCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGCGAAAAATCCCAGGCTaGCCGCAGCGATCATTAGTC | + |
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Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQRKIPG*PQRSLV Trigger: GACTAATGATCGCTGCGGTCAGCCTGGGATTTTTCG...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS-3UTR TCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGTCTCCTTCTCCGCCTTaGTACTTGGTCCGAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQSPSPP*YLVRED Trigger: GTCTTCTCGGACCAAGTATCAAGGCGGAGAAGGAGA...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS-3UTR TCA 90 bp | CCTGACGGACAGAACCAAGAAACTAGAAATCAACGACATGGCACATTGGTTGTGTCTCCTTCTCCGCCTTaGTACTTGGTCCGAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PDGQNQETRNQRHGTLVVSPSPP*YLVRED Trigger: GTCTTCTCGGACCAAGTATCAAGGCGGAGAAGGAGA...CACAACCAATGTGCCATGTCGTTGATTTCTAGTTTCTTGGTTCTGTCCGTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGATTCGTTGGATGTGGTaGCAGCGACGAGAGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQIRWMW*QRREHQ Trigger: TTGGTGCTCTCGTCGCTGCCACCACATCCAACGAAT...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAAGATAGTGAAATGTaGCCGGCAGTGGAAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQEDSEM*PAVEGA Trigger: GGCTCCTTCCACTGCCGGCCACATTTCACTATCTTC...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
||
| CDS-3UTR CCA 90 bp | GCACACTTGTGTTTGATCTGTGGGTGGAACGAGGGAAGCTCTCAGCACATTAAGGGGAACAGCCTGTCATaGAACACAGACCTGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: AHLCLICGWNEGSSQHIKGNSLS*NTDLTI Trigger: TATTGTCAGGTCTGTGTTCCATGACAGGCTGTTCCC...CTTAATGTGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAAACACAAGTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCAAGACATGGCAGACGTaGGTCCGTTGTATGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSKTWQT*VRCMCS Trigger: GCTACACATACAACGGACCCACGTCTGCCATGTCTT...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGCTCCGCCTTGATACTTaGTCCGAGAAGACATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQLRLDT*SEKTWQ Trigger: CTGCCATGTCTTCTCGGACCAAGTATCAAGGCGGAG...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| 3UTR CAA 72 bp | ACATGCAGGGCTGGCCTCAGGAATTCACCTGTATCTTaGTTCCAAAACCACCTGATCAAGTTCCATGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TCRAGLRNSPVS*FQNHLIKFHAL Trigger: CAAGGCATGGAACTTGATCAGGTGGTTTTGGAACAAAGATACAGGTGAATTCCTGAGGCCAGCCCTGCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGAGCTTTGGCTTGATCTaGGCCTCCGACTTTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQSFGLI*ASDFGT Trigger: TGTACCAAAGTCGGAGGCTCAGATCAAGCCAAAGCT...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR TCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCACAGACCTGACAATATaGATACAATCCCGGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSTDLTI*IQSRPS Trigger: GCTTGGCCGGGATTGTATTCATATTGTCAGGTCTGT...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR TCA 90 bp | TTGATCTGTGGGTGGAACGAGGGAAGCTCTCAGCACATTAAGGATCCAGTGGCTCATGGAACACAGACCTaGCAATATGAATACAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LICGWNEGSSQHIKDPVAHGTQT*QYEYNP Trigger: GGGATTGTATTCATATTGTCAGGTCTGTGTTCCATG...AGCCACTGGATCCTTAATGTGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCGGGAACAGCCTGTCATaGAACACAGACCTGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSGNSLS*NTDLTI Trigger: TATTGTCAGGTCTGTGTTCCATGACAGGCTGTTCCC...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGAAGACATGGCAGACGTaGGTCCGTTGTATGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQKTWQT*VRCMCS Trigger: GCTACACATACAACGGACCCACGTCTGCCATGTCTT...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR CCA 90 bp | CCTTTCCTTTCCTTTCCGTTGAATCCCTGCAAACAGTGTCCTCTATTTCCTTTTTGGTCCGAGAAGACATaGCAGACGTGGGTCCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PFLSFPLNPCKQCPLFPFWSEKT*QTWVRC Trigger: ACAACGGACCCACGTCTGCCATGTCTTCTCGGACCA...AAAAGGAAATAGAGGACACTGTTTGCAGGGATTCAACGGAAAGGAAAGGAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS-3UTR CCA 90 bp | TGGGAAAGTCATGTAGTCAGCCATGTGACTCGTTGTGGGCGATTTATAGCATATCCTTCCAGTAGTCGGTaGGCAGTGTGGAAGACACTA | + |
|
Preference number: 4 (lower is better) Translates to: WESHVVSHVTRCGRFIAYPSSSR*AVWKTL Trigger: TAGTGTCTTCCACACTGCCCACCGACTACTGGAAGG...ATATGCTATAAATCGCCCACAACGAGTCACATGGCTGACTACATGACTTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGGGAACAGCCTGTCATaGAACACAGACCTGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQGNSLS*NTDLTI Trigger: TATTGTCAGGTCTGTGTTCCATGACAGGCTGTTCCC...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGATTTTAGCTTTGGCTTaGTCTGAGCCTCCGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQILALA*SEPPTL Trigger: CAAAGTCGGAGGCTCAGATCAAGCCAAAGCTAAAAT...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR TCA 90 bp | TGGGAAAGTCATGTAGTCAGCCATGTGACTCGTTGTGGGCGATTTATAGCATATACAGACCTGACAATATaGATACAATCCCGGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WESHVVSHVTRCGRFIAYTDLTI*IQSRPS Trigger: GCTTGGCCGGGATTGTATTCATATTGTCAGGTCTGT...ATATGCTATAAATCGCCCACAACGAGTCACATGGCTGACTACATGACTTTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS-3UTR TCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCCATGGAACACAGACCTaGCAATATGAATACAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSHGTQT*QYEYNP Trigger: GGGATTGTATTCATATTGTCAGGTCTGTGTTCCATG...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGCATGGAACACAGACCTaGCAATATGAATACAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQHGTQT*QYEYNP Trigger: GGGATTGTATTCATATTGTCAGGTCTGTGTTCCATG...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR GCA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCTGTTGTGATTTTGTTTaGATACAGGGAACAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSCCDFV*IQGTAC Trigger: ACAGGCTGTTCCCTGTATGCAAACAAAATCACAACA...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGCTGAGCCTCCGACTTTaGTACATTTCATTCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQLSLRL*YISFQR Trigger: TCTTTGGAATGAAATGTACCAAAGTCGGAGGCTCAG...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| 3UTR CAA 72 bp | TCTTTGTTCCAAAACCACCTGATCAAGTTCCATGCCTaGAAAAATGGCCAGTGTCTCAGTGACCTAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLFQNHLIKFHA*KNGQCLSDLVS Trigger: ACTCACTAGGTCACTGAGACACTGGCCATTTTTCAAGGCATGGAACTTGATCAGGTGGTTTTGGAACAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS-3UTR GCA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGTGTTGTGATTTTGTTTaGATACAGGGAACAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQCCDFV*IQGTAC Trigger: ACAGGCTGTTCCCTGTATGCAAACAAAATCACAACA...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR GCA 90 bp | CCTGACGGACAGAACCAAGAAACTAGAAATCAACGACATGGCACATTGGTTGTGTGTTGTGATTTTGTTTaGATACAGGGAACAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PDGQNQETRNQRHGTLVVCCDFV*IQGTAC Trigger: ACAGGCTGTTCCCTGTATGCAAACAAAATCACAACA...CACAACCAATGTGCCATGTCGTTGATTTCTAGTTTCTTGGTTCTGTCCGTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS-3UTR CCA 90 bp | TGGGAAAGTCATGTAGTCAGCCATGTGACTCGTTGTGGGCGATTTATAGCATATCTGAGCCTCCGACTTTaGTACATTTCATTCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WESHVVSHVTRCGRFIAYLSLRL*YISFQR Trigger: TCTTTGGAATGAAATGTACCAAAGTCGGAGGCTCAG...ATATGCTATAAATCGCCCACAACGAGTCACATGGCTGACTACATGACTTTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| 3UTR CAA 72 bp | ACCAAGAAACTAGAAATCAACGACATGGCACATTGGTaGTGTGATTGTTTGACTTGGATACTGGATGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKKLEINDMAHW*CDCLTWILDEG Trigger: CCCCTCATCCAGTATCCAAGTCAAACAATCACACAACCAATGTGCCATGTCGTTGATTTCTAGTTTCTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS CCA 90 bp | CAGTGCCATCGATGGTGGAGACCTTCCAGTAGTCGGTGGGCAGTGTaGAAGACACTAGCACCCAGCCCGAGATGGAGACTACGAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QCHRWWRPSSSRWAV*KTLAPSPRWRLRRR Trigger: TCGCCTTCGTAGTCTCCATCTCGGGCTGGGTGCTAGTGTCTTCCACACTGCCCACCGACTACTGGAAGGTCTCCACCATCGATGGCACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS GCA 90 bp | GATAGTGAAATGTGGCCGGCAGTGGAAGGAGCCCAGAGCGTTACCTaGGCAGTTCATCCACAGACCCTGGTAAACCCAGGTGGCGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: DSEMWPAVEGAQSVT*AVHPQTLVNPGGGN Trigger: ATTACCGCCACCTGGGTTTACCAGGGTCTGTGGATGAACTGCGCAGGTAACGCTCTGGGCTCCTTCCACTGCCGGCCACATTTCACTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
||
| CDS-3UTR CAA 90 bp | GTGGGTGGAACGAGGGAAGCTCTCAGCACATTAAGGATCCAGTGGCTACCATTCATGGAGGGGAACTCCTaGCAGTTGGCGACACCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGGTREALSTLRIQWLPFMEGNS*QLATPV Trigger: CACCGGTGTCGCCAACTGCAAGGAGTTCCCCTCCAT...GAATGGTAGCCACTGGATCCTTAATGTGCTGAGAGCTTCCCTCGTTCCACCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS CCA 90 bp | CTCCTTCTCCGCCTTGATACTTGGTCCGAGAAGACATGGCAGACGTaGGTCCGTTGTATGTGTAGCCCATTCTGGGTGTCTTGTTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLRLDTWSEKTWQT*VRCMCSPFWVSCCC Trigger: ACAACAACAAGACACCCAGAATGGGCTACACATACAACGGACCCACGTCTGCCATGTCTTCTCGGACCAAGTATCAAGGCGGAGAAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000100314.4 |
||
| CDS-3UTR CAA 90 bp | GTGGGTGGAACGAGGGAAGCTCTCAGCACATTAAGGATCCAGTGGCTACCATTCATCTCCTTCTCCGCCTaGATACTTGGTCCGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VGGTREALSTLRIQWLPFISFSA*ILGPRR Trigger: TCTTCTCGGACCAAGTATCAAGGCGGAGAAGGAGAT...GAATGGTAGCCACTGGATCCTTAATGTGCTGAGAGCTTCCCTCGTTCCACCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS CCA 90 bp | TCTACATGCCTGGATGTAACCTTCTACTTTGAAGATAGTGAAATGTaGCCGGCAGTGGAAGGAGCCCAGAGCGTTACCTGCGCAGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: STCLDVTFYFEDSEM*PAVEGAQSVTCAVH Trigger: ATGAACTGCGCAGGTAACGCTCTGGGCTCCTTCCACTGCCGGCCACATTTCACTATCTTCAAAGTAGAAGGTTACATCCAGGCATGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
||
| CDS-3UTR CAA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGTCACTTTCCATTCGTaGGATGTGGTGGCAGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQVTFHS*DVVAAT Trigger: CGTCGCTGCCACCACATCCAACGAATGGAAAGTGAC...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
||
| CDS-3UTR CAA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCATCTCCTTCTCCGCCTaGATACTTGGTCCGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSISFSA*ILGPRR Trigger: TCTTCTCGGACCAAGTATCAAGGCGGAGAAGGAGAT...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR CAA 90 bp | ACCTTGGCCTCACCAGCCCTTTCTTTGGCCATCATGACAAATGACAGCCCTGACCTGGGTGTCTTGTTGTaGTCGGATATTGAAAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TLASPALSLAIMTNDSPDLGVLL*SDIEKQ Trigger: TTGCTTTTCAATATCCGACAACAACAAGACACCCAG...GTCAGGGCTGTCATTTGTCATGATGGCCAAAGAAAGGGCTGGTGAGGCCAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS-3UTR CAA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGATCTCCTTCTCCGCCTaGATACTTGGTCCGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQISFSA*ILGPRR Trigger: TCTTCTCGGACCAAGTATCAAGGCGGAGAAGGAGAT...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR CAA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCTCTGAGCCTCCGACTTaGGTACATTTCATTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSSEPPT*VHFIPK Trigger: CTTTGGAATGAAATGTACCAAAGTCGGAGGCTCAGA...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
||
| CDS-3UTR CAA 90 bp | ATCGTCTGCACACTTGTGTTTGATCTGTGGGTGGAACGAGGGAAGCTCTCAGCAATTCTGGGTGTCTTGTaGTTGTCGGATATTGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IVCTLVFDLWVERGKLSAILGVL*LSDIEK Trigger: CTTTTCAATATCCGACAACAACAAGACACCCAGAAT...TGCTGAGAGCTTCCCTCGTTCCACCCACAGATCAAACACAAGTGTGCAGACGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS TCA 90 bp | ATTTCATTCCAAAGAGTGCAAAAATGGAACCGAAAAATCCCAGGCTaGCCGCAGCGATCATTAGTCCTCTACATGCCTGGATGTAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: ISFQRVQKWNRKIPG*PQRSLVLYMPGCNL Trigger: AAGGTTACATCCAGGCATGTAGAGGACTAATGATCGCTGCGGTCAGCCTGGGATTTTTCGGTTCCATTTTTGCACTCTTTGGAATGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
||
| CDS TCA 90 bp | GTTGTATGTGTAGCCCATTCTGGGTGTCTTGTTGTTGTCGGATATTaGAAAGCAAAATATGACTCCCCCAATGATGCAGAGAGAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVCVAHSGCLVVVGY*KAKYDSPNDAERSS Trigger: GGAGCTTCTCTCTGCATCATTGGGGGAGTCATATTTTGCTTTTCAATATCCGACAACAACAAGACACCCAGAATGGGCTACACATACAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000100314.4 |
||
| CDS TCA 90 bp | ATTTCATTCCAAAGAGTGCAAAAATGGAACCGAAAAATCCCAGGCTaGCCGCAGCGATCATTAGTCCTCTACATGCCTGGATGTAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: ISFQRVQKWNRKIPG*PQRSLVLYMPGCNH Trigger: ATGGTTACATCCAGGCATGTAGAGGACTAATGATCGCTGCGGTCAGCCTGGGATTTTTCGGTTCCATTTTTGCACTCTTTGGAATGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS-3UTR CAA 90 bp | TGGGAAAGTCATGTAGTCAGCCATGTGACTCGTTGTGGGCGATTTATAGCATATTCTGAGCCTCCGACTTaGGTACATTTCATTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WESHVVSHVTRCGRFIAYSEPPT*VHFIPK Trigger: CTTTGGAATGAAATGTACCAAAGTCGGAGGCTCAGA...ATATGCTATAAATCGCCCACAACGAGTCACATGGCTGACTACATGACTTTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
||
| CDS-3UTR CAA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGCTGGGTGTCTTGTTGTaGTCGGATATTGAAAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQLGVLL*SDIEKQ Trigger: TTGCTTTTCAATATCCGACAACAACAAGACACCCAG...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000100314.4 |
||
| CDS-3UTR CAA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCATTCTGGGTGTCTTGTaGTTGTCGGATATTGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSILGVL*LSDIEK Trigger: CTTTTCAATATCCGACAACAACAAGACACCCAGAAT...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000100314.4 |
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| CDS-3UTR CAA 90 bp | TGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGGAGGCAGCAATTCTGTTGTGATTTaGTTTGCATACAGGGAACAG | + |
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Preference number: 5 (lower is better) Translates to: WKDYCEDSSLAQQNSGGSNSVVI*FAYREQ Trigger: CTGTTCCCTGTATGCAAACAAAATCACAACAGAATT...GCTGCCTCCTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS TCA 90 bp | GAATACAATCCCGGCCAAGCAAGCAATTTTAGCTTTGGCTTGATCTaGGCCTCCGACTTTGGTACATTTCATTCCAAAGAGTGCAAAAAT | + |
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Preference number: 5 (lower is better) Translates to: EYNPGQASNFSFGLI*ASDFGTFHSKECKN Trigger: ATTTTTGCACTCTTTGGAATGAAATGTACCAAAGTCGGAGGCTCAGATCAAGCCAAAGCTAAAATTGCTTGCTTGGCCGGGATTGTATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS TCA 90 bp | AATATGAATACAATCCCGGCCAAGCAAGCAATTTTAGCTTTGGCTTaGTCTGAGCCTCCGACTTTGGTACATTTCATTCCAAAGAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: NMNTIPAKQAILALA*SEPPTLVHFIPKSA Trigger: TGCACTCTTTGGAATGAAATGTACCAAAGTCGGAGGCTCAGATCAAGCCAAAGCTAAAATTGCTTGCTTGGCCGGGATTGTATTCATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS-3UTR CAA 90 bp | GAGAGCCTTGGAAGGACTATTGTGAGGACAGTTCTCTTGCACAACAAAACTCAGAATTCTGTTGTGATTTaGTTTGCATACAGGGAACAG | + |
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Preference number: 5 (lower is better) Translates to: ESLGRTIVRTVLLHNKTQNSVVI*FAYREQ Trigger: CTGTTCCCTGTATGCAAACAAAATCACAACAGAATT...CTGAGTTTTGTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS CCA 72 bp | TGGGCAGTGTGGAAGACACTAGCACCCAGCCCGAGATaGAGACTACGAAGGCGACGATTTCCAAGGCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: WAVWKTLAPSPR*RLRRRRFPRPC Trigger: GCACGGCCTTGGAAATCGTCGCCTTCGTAGTCTCCATCTCGGGCTGGGTGCTAGTGTCTTCCACACTGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| CDS CCA 72 bp | CAGTGCCATCGATGGTGGAGACCTTCCAGTAGTCGGTaGGCAGTGTGGAAGACACTAGCACCCAGCCCGAGA | + |
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Preference number: 6 (lower is better) Translates to: QCHRWWRPSSSR*AVWKTLAPSPR Trigger: TCTCGGGCTGGGTGCTAGTGTCTTCCACACTGCCCACCGACTACTGGAAGGTCTCCACCATCGATGGCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| CDS CAA 90 bp | GTGGCGGTAATCACAGACGACGCTCGGGTGGTCACTTTCCATTCGTaGGATGTGGTGGCAGCGACGAGAGCACCAAACCCTCCAACACCA | + |
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Preference number: 6 (lower is better) Translates to: VAVITDDARVVTFHS*DVVAATRAPNPPTP Trigger: TGGTGTTGGAGGGTTTGGTGCTCTCGTCGCTGCCACCACATCCAACGAATGGAAAGTGACCACCCGAGCGTCGTCTGTGATTACCGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
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| CDS CCA 72 bp | ACGCTCGGGTGGTCACTTTCCATTCGTTGGATGTGGTaGCAGCGACGAGAGCACCAAACCCTCCAACACCAC | + |
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Preference number: 6 (lower is better) Translates to: TLGWSLSIRWMW*QRREHQTLQHH Trigger: GTGGTGTTGGAGGGTTTGGTGCTCTCGTCGCTGCCACCACATCCAACGAATGGAAAGTGACCACCCGAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
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| CDS CCA 72 bp | ACGACGCTCGGGTGGTCACTTTCCATTCGTTGGATGTaGTGGCAGCGACGAGAGCACCAAACCCTCCAACAC | + |
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Preference number: 6 (lower is better) Translates to: TTLGWSLSIRWM*WQRREHQTLQH Trigger: GTGTTGGAGGGTTTGGTGCTCTCGTCGCTGCCACCACATCCAACGAATGGAAAGTGACCACCCGAGCGTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
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| CDS CCA 72 bp | TCACAGACGACGCTCGGGTGGTCACTTTCCATTCGTTaGATGTGGTGGCAGCGACGAGAGCACCAAACCCTC | + |
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Preference number: 6 (lower is better) Translates to: SQTTLGWSLSIR*MWWQRREHQTL Trigger: GAGGGTTTGGTGCTCTCGTCGCTGCCACCACATCCAACGAATGGAAAGTGACCACCCGAGCGTCGTCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
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| CDS CCA 72 bp | CGATGGTGGAGACCTTCCAGTAGTCGGTGGGCAGTGTaGAAGACACTAGCACCCAGCCCGAGATGGAGACTA | + |
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Preference number: 6 (lower is better) Translates to: RWWRPSSSRWAV*KTLAPSPRWRL Trigger: TAGTCTCCATCTCGGGCTGGGTGCTAGTGTCTTCCACACTGCCCACCGACTACTGGAAGGTCTCCACCATCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| CDS CCA 72 bp | CTCTACATGCCTGGATGTAACCATCCAACGCCAGCATaGAGGGGAACTCCTTGCAGTTGGCGACACCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LYMPGCNHPTPA*RGTPCSWRHRW Trigger: CCACCGGTGTCGCCAACTGCAAGGAGTTCCCCTCCATGCTGGCGTTGGATGGTTACATCCAGGCATGTAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100314.4 |
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| CDS CAA 72 bp | ATCACAGACGACGCTCGGGTGGTCACTTTCCATTCGTaGGATGTGGTGGCAGCGACGAGAGCACCAAACCCT | + |
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Preference number: 6 (lower is better) Translates to: ITDDARVVTFHS*DVVAATRAPNP Trigger: AGGGTTTGGTGCTCTCGTCGCTGCCACCACATCCAACGAATGGAAAGTGACCACCCGAGCGTCGTCTGTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
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| CDS CCA 72 bp | CGCCTTGATACTTGGTCCGAGAAGACATGGCAGACGTaGGTCCGTTGTATGTGTAGCCCATTCTGGGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RLDTWSEKTWQT*VRCMCSPFWVS Trigger: AGACACCCAGAATGGGCTACACATACAACGGACCCACGTCTGCCATGTCTTCTCGGACCAAGTATCAAGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000100314.4 |
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| CDS CCA 72 bp | CTCCTTCTCCGCCTTGATACTTGGTCCGAGAAGACATaGCAGACGTGGGTCCGTTGTATGTGTAGCCCATTC | + |
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Preference number: 6 (lower is better) Translates to: LLLRLDTWSEKT*QTWVRCMCSPF Trigger: GAATGGGCTACACATACAACGGACCCACGTCTGCCATGTCTTCTCGGACCAAGTATCAAGGCGGAGAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000100314.4 |
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| CDS CCA 72 bp | CCTTCTACTTTGAAGATAGTGAAATGTGGCCGGCAGTaGAAGGAGCCCAGAGCGTTACCTGCGCAGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: PSTLKIVKCGRQ*KEPRALPAQFI Trigger: GATGAACTGCGCAGGTAACGCTCTGGGCTCCTTCCACTGCCGGCCACATTTCACTATCTTCAAAGTAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 |
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| CDS CCA 72 bp | CTCCTTCTCCGCCTTGATACTTGGTCCGAGAAGACATaGCAGACGTGGGTCCGTTGTATGTGTAGCCCATTT | + |
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Preference number: 6 (lower is better) Translates to: LLLRLDTWSEKT*QTWVRCMCSPF Trigger: AAATGGGCTACACATACAACGGACCCACGTCTGCCATGTCTTCTCGGACCAAGTATCAAGGCGGAGAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071546.14 |
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| CDS TCA 72 bp | GAAGGGCCTGTGGTTTTAAAATCTCCTTCTCCGCCTTaGTACTTGGTCCGAGAAGACATGGCAGACGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: EGPVVLKSPSPP*YLVREDMADVG Trigger: ACCCACGTCTGCCATGTCTTCTCGGACCAAGTATCAAGGCGGAGAAGGAGATTTTAAAACCACAGGCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS TCA 72 bp | CAAAGAGTGCAAAAATGGAACCGAAAAATCCCAGGCTaGCCGCAGCGATCATTAGTCCTCTACATGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: QRVQKWNRKIPG*PQRSLVLYMPG Trigger: TCCAGGCATGTAGAGGACTAATGATCGCTGCGGTCAGCCTGGGATTTTTCGGTTCCATTTTTGCACTCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS TCA 72 bp | TGCATACAGGGAACAGCCTGTCATGGAACACAGACCTaGCAATATGAATACAATCCCGGCCAAGCAAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: CIQGTACHGTQT*QYEYNPGQASN Trigger: ATTGCTTGCTTGGCCGGGATTGTATTCATATTGTCAGGTCTGTGTTCCATGACAGGCTGTTCCCTGTATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS CCA 72 bp | TGGCAGACGTGGGTCCGTTGTATGTGTAGCCCATTCTaGGTGTCTTGTTGTTGTCGGATATTGAAAAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: WQTWVRCMCSPF*VSCCCRILKSK Trigger: TTTGCTTTTCAATATCCGACAACAACAAGACACCCAGAATGGGCTACACATACAACGGACCCACGTCTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000100314.4 |
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| CDS TCA 72 bp | ACAATCCCGGCCAAGCAAGCAATTTTAGCTTTGGCTTaGTCTGAGCCTCCGACTTTGGTACATTTCATTCCA | + |
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Preference number: 6 (lower is better) Translates to: TIPAKQAILALA*SEPPTLVHFIP Trigger: TGGAATGAAATGTACCAAAGTCGGAGGCTCAGATCAAGCCAAAGCTAAAATTGCTTGCTTGGCCGGGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047761.13 ENSMUST00000071546.14 ENSMUST00000100314.4 |
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| CDS TCA 72 bp | GTAGCCCATTCTGGGTGTCTTGTTGTTGTCGGATATTaGAAAGCAAAATATGACTCCCCCAATGATGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: VAHSGCLVVVGY*KAKYDSPNDAE Trigger: CTCTGCATCATTGGGGGAGTCATATTTTGCTTTTCAATATCCGACAACAACAAGACACCCAGAATGGGCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047761.13 ENSMUST00000100314.4 |
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| CDS CAA 72 bp | GGCAGACGTGGGTCCGTTGTATGTGTAGCCCATTTTTaGCTCCATATAAAGAGGATCAAAGAATTCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: GRRGSVVCVAHF*LHIKRIKEFCC Trigger: ACAACAGAATTCTTTGATCCTCTTTATATGGAGCAAAAAATGGGCTACACATACAACGGACCCACGTCTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071546.14 |
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