Pregenerated sensors for CLCN6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029016Ensembl transcript IDs: ENSMUST00000030879.12, ENSMUST00000105711.3, ENSMUST00000131232.2, ENSMUST00000137724.8
Found 392 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCACCTaGAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCA | + |
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Preference number: 1 (lower is better) Translates to: EPSCRLWGPVSERAT*RGTSGRVGWLQPGA Trigger: TGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| 3UTR CCA 90 bp | CTGAGGTCCACAGGAGCCAAGGGCAACTCTCCTTGTCAACATGGCTaGGCCAGGAAGGCTGGGCTGGCCTCTCCGGAAGCTTTCTTGTCA | + |
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Preference number: 1 (lower is better) Translates to: LRSTGAKGNSPCQHG*ARKAGLASPEAFLS Trigger: TGACAAGAAAGCTTCCGGAGAGGCCAGCCCAGCCTTCCTGGCCCAGCCATGTTGACAAGGAGAGTTGCCCTTGGCTCCTGTGGACCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR CCA 90 bp | GCAGGTTCAGCAGGGACCCAGAAAACTGAGTGTCCTAGAGGAGCATaGGCCAGGGTGGGTATGCCTGGACCCTGTCCACTCTGGGCTAAA | + |
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Preference number: 1 (lower is better) Translates to: AGSAGTQKTECPRGA*ARVGMPGPCPLWAK Trigger: TTTAGCCCAGAGTGGACAGGGTCCAGGCATACCCACCCTGGCCCATGCTCCTCTAGGACACTCAGTTTTCTGGGTCCCTGCTGAACCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR CCA 90 bp | GTTTGCCTCAGTCCAACACCTTCCCGGGAGGGTCTGGGCAAGAGCTaGGCTCTCCAAGAAACAGCAACAGAGAGGTACCAAGTGTCCACC | + |
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Preference number: 1 (lower is better) Translates to: VCLSPTPSREGLGKS*ALQETATERYQVST Trigger: GGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACCCTCCCGGGAAGGTGTTGGACTGAGGCAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| 3UTR CCA 90 bp | AGAGGAGCATGGGCCAGGGTGGGTATGCCTGGACCCTGTCCACTCTaGGCTAAACTGATGGTCACACACACACACACACACACTCGATGG | + |
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Preference number: 1 (lower is better) Translates to: RGAWARVGMPGPCPL*AKLMVTHTHTHTRW Trigger: CCATCGAGTGTGTGTGTGTGTGTGTGTGACCATCAGTTTAGCCCAGAGTGGACAGGGTCCAGGCATACCCACCCTGGCCCATGCTCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR TCA 90 bp | GACAAATCACAACAGGACTGGCTTGGAGGCAGGGAAGCTGTGGACTaGGGTCCTCCACAGGCTACAATTCTGCAAACCCACCAGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: DKSQQDWLGGREAVD*GPPQATILQTHQAG Trigger: CCCAGCCTGGTGGGTTTGCAGAATTGTAGCCTGTGGAGGACCTCAGTCCACAGCTTCCCTGCCTCCAAGCCAGTCCTGTTGTGATTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR GCA 90 bp | GAGGCAGGGAAGCTGTGGACTGAGGTCCTCCACAGGCTACAATTCTaGAAACCCACCAGGCTGGGAAGACAGTTCTGTGGTGTGTCACAC | + |
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Preference number: 1 (lower is better) Translates to: EAGKLWTEVLHRLQF*KPTRLGRQFCGVSH Trigger: GTGTGACACACCACAGAACTGTCTTCCCAGCCTGGTGGGTTTGCAGAATTGTAGCCTGTGGAGGACCTCAGTCCACAGCTTCCCTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR CCA 90 bp | CGGGTATCGCGGGTAGTCCTCAGCCATCTCAGCGTAAGAAAGACGTaGTTGGCTGGCACTGGACTGACTTTCCGAATAGCACACTCCTCG | + |
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Preference number: 1 (lower is better) Translates to: RVSRVVLSHLSVRKT*LAGTGLTFRIAHSS Trigger: CGAGGAGTGTGCTATTCGGAAAGTCAGTCCAGTGCCAGCCAACCACGTCTTTCTTACGCTGAGATGGCTGAGGACTACCCGCGATACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
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| 3UTR CCA 90 bp | AGGGCAACTCTCCTTGTCAACATGGCTGGGCCAGGAAGGCTGGGCTaGCCTCTCCGGAAGCTTTCTTGTCACCAAGGTCTGCATCAAACT | + |
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Preference number: 1 (lower is better) Translates to: RATLLVNMAGPGRLG*PLRKLSCHQGLHQT Trigger: AGTTTGATGCAGACCTTGGTGACAAGAAAGCTTCCGGAGAGGCCAGCCCAGCCTTCCTGGCCCAGCCATGTTGACAAGGAGAGTTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR TCA 90 bp | GGGCCAGGGTGGGTATGCCTGGACCCTGTCCACTCTGGGCTAAACTaGTGGTCACACACACACACACACACACTCGATGGACAAATCACA | + |
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Preference number: 1 (lower is better) Translates to: GPGWVCLDPVHSGLN*WSHTHTHTLDGQIT Trigger: TGTGATTTGTCCATCGAGTGTGTGTGTGTGTGTGTGTGACCATCAGTTTAGCCCAGAGTGGACAGGGTCCAGGCATACCCACCCTGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR GCA 90 bp | CCAAAGAACAGCTGCCACAAGGGCCTTGGGTTGCAGGAAGATGAATaGAAATGTCCCTACTCAGATGTTGGTTCCGAGAGGACCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: PKNSCHKGLGLQEDE*KCPYSDVGSERTSS Trigger: GCTGCTGGTCCTCTCGGAACCAACATCTGAGTAGGGACATTTGCATTCATCTTCCTGCAACCCAAGGCCCTTGTGGCAGCTGTTCTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR CCA 90 bp | ACACACACACACACACTCGATGGACAAATCACAACAGGACTGGCTTaGAGGCAGGGAAGCTGTGGACTGAGGTCCTCCACAGGCTACAAT | + |
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Preference number: 1 (lower is better) Translates to: THTHTLDGQITTGLA*RQGSCGLRSSTGYN Trigger: ATTGTAGCCTGTGGAGGACCTCAGTCCACAGCTTCCCTGCCTCCAAGCCAGTCCTGTTGTGATTTGTCCATCGAGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR CCA 90 bp | CTCTGGGCTAAACTGATGGTCACACACACACACACACACACTCGATaGACAAATCACAACAGGACTGGCTTGGAGGCAGGGAAGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: LWAKLMVTHTHTHTR*TNHNRTGLEAGKLW Trigger: CCACAGCTTCCCTGCCTCCAAGCCAGTCCTGTTGTGATTTGTCCATCGAGTGTGTGTGTGTGTGTGTGTGACCATCAGTTTAGCCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR TCA 90 bp | ACAGGCAAGTGGCGCAGGCCCATGGTTCTGAACAGGTTGAACACTTaGGAAACATGGGTGTTGGGGGAGACGGTAAATGGTGAAGGATTC | + |
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Preference number: 1 (lower is better) Translates to: TGKWRRPMVLNRLNT*ETWVLGETVNGEGF Trigger: GAATCCTTCACCATTTACCGTCTCCCCCAACACCCATGTTTCTCAAGTGTTCAACCTGTTCAGAACCATGGGCCTGCGCCACTTGCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
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| 3UTR CCA 90 bp | GGACTGAGGTCCTCCACAGGCTACAATTCTGCAAACCCACCAGGCTaGGAAGACAGTTCTGTGGTGTGTCACACTTTTCTCTTAGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: GLRSSTGYNSANPPG*EDSSVVCHTFLLVG Trigger: TCCCACTAAGAGAAAAGTGTGACACACCACAGAACTGTCTTCCCAGCCTGGTGGGTTTGCAGAATTGTAGCCTGTGGAGGACCTCAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR TCA 90 bp | ACAGAAGGAGAAGAAAGTTGGGCCAATGAAGAGGCAGAATGTATCTaGAGTCTTGGTTCTGATCCCAGGCCTCCCCAAACATGGGGAACA | + |
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Preference number: 1 (lower is better) Translates to: TEGEESWANEEAECI*SLGSDPRPPQTWGT Trigger: TGTTCCCCATGTTTGGGGAGGCCTGGGATCAGAACCAAGACTTCAGATACATTCTGCCTCTTCATTGGCCCAACTTTCTTCTCCTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| 3UTR TCA 90 bp | ATCCTCTTCTTCCTGTGTCTCCCCAAGGATGGTCTTCAGGACACCTaGAAGATGTCTGATGGCAGCTTCGTTGGAGGAGAAAATTCGTGT | + |
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Preference number: 1 (lower is better) Translates to: ILFFLCLPKDGLQDT*KMSDGSFVGGENSC Trigger: ACACGAATTTTCTCCTCCAACGAAGCTGCCATCAGACATCTTTCAGGTGTCCTGAAGACCATCCTTGGGGAGACACAGGAAGAAGAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
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| 3UTR TCA 90 bp | CCTGTGTCTCCCCAAGGATGGTCTTCAGGACACCTGAAAGATGTCTaGTGGCAGCTTCGTTGGAGGAGAAAATTCGTGTTTCATTTGACA | + |
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Preference number: 1 (lower is better) Translates to: PVSPQGWSSGHLKDV*WQLRWRRKFVFHLT Trigger: TGTCAAATGAAACACGAATTTTCTCCTCCAACGAAGCTGCCATCAGACATCTTTCAGGTGTCCTGAAGACCATCCTTGGGGAGACACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
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| 3UTR CCA 90 bp | GGGACTACTGAATGTTCACAGAAGGGAGAAGCTGTCCCCCTGTGGTaGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCAT | + |
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Preference number: 1 (lower is better) Translates to: GTTECSQKGEAVPLW*DLMLQRLLAGILVH Trigger: ATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCACCACAGGGGGACAGCTTCTCCCTTCTGTGAACATTCAGTAGTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR CCA 90 bp | AATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTaGTCAGGAATGAGTCTAAAGACATTCAAGCCACGGGGTCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: NASKAVSWNFSASRI*SGMSLKTFKPRGQS Trigger: GCTCTGACCCCGTGGCTTGAATGTCTTTAGACTCATTCCTGACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| 3UTR CCA 90 bp | AGCTGTCCCCCTGTGGTGGGATTTAATGCTTCAAAGGCTGTTAGCTaGAATTTTAGTGCATCAAGGATCTGGTCAGGAATGAGTCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: SCPPVVGFNASKAVS*NFSASRIWSGMSLK Trigger: CTTTAGACTCATTCCTGACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCACCACAGGGGGACAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| 3UTR TCA 90 bp | AATGAATCCAAGATAAAGTTGTGGCTGTCCCACCAGGAAGACAGATaGAGGCTTAGAAAGTCGAGTAGTTGTAGAGAGGAAAGGAATGAC | + |
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Preference number: 1 (lower is better) Translates to: NESKIKLWLSHQEDR*RLRKSSSCREERND Trigger: GTCATTCCTTTCCTCTCTACAACTACTCGACTTTCTAAGCCTTCATCTGTCTTCCTGGTGGGACAGCCACAACTTTATCTTGGATTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR GCA 90 bp | AAAGAATCTAAAACAAATGAATGCCACATGTATCCAAAGAACAGCTaGCACAAGGGCCTTGGGTTGCAGGAAGATGAATGCAAATGTCCC | + |
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Preference number: 1 (lower is better) Translates to: KESKTNECHMYPKNS*HKGLGLQEDECKCP Trigger: GGGACATTTGCATTCATCTTCCTGCAACCCAAGGCCCTTGTGGCAGCTGTTCTTTGGATACATGTGGCATTCATTTGTTTTAGATTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCGGGCCACCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGGGGGCCAGTAAGTaGGCGGGCCACCTGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VSGPPAEAPLGEWAGFSRVGASK*AGHLQR Trigger: CCTCTGCAGGTGGCCCGCTCACTTACTGGCCCCCAC...CCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGCCCGCTCAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAAGCCCGACGGCACCCTaGCGTCTCCTTAGGGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: QASEQTGEWEPSCRLWGPSPTAP*RLLRGA Trigger: AGCTCCCCTAAGGAGACGTCAGGGTGCCGTCGGGCT...TGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCAAGGGCAACTCTCCTTGTCAACATGGCTGGGCCAGGAAGGCTGGGCTGGCAGGCCGAGTCGGGAGTaGACTGGGAAGCTGGGCTCG | + |
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Preference number: 2 (lower is better) Translates to: SQGQLSLSTWLGQEGWAGRPSRE*TGKLGS Trigger: CGAGCCCAGCTTCCCAGTGCACTCCCGACTCGGCCT...GCCAGCCCAGCCTTCCTGGCCCAGCCATGTTGACAAGGAGAGTTGCCCTTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGCCTTCATGCCGGCTGTaGGGGCCAGTAAGTGAGCGG | + |
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Preference number: 2 (lower is better) Translates to: RHLSKRVSGSLHAGCGGQPSCRL*GPVSER Trigger: CCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGG...CTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCACTGCAGAGGCACCTCTaGGAGAGTGGGCTGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: QASEQTGEWEPSCRLWGPLQRHL*ESGLAS Trigger: TGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAG...TGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAGGACTCCAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTTCCCGGGAGGGTCTaGGCAAGAGCTGGGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LPGLQASEQTGEWEPSCRLPGRV*ARAGLS Trigger: GGAGAGCCCAGCTCTTGCCCAGACCCTCCCGGGAAG...CCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTGGAGTCCTGGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGGTCATGTATGTCCGGGTATCGCGGGTAGTCCTCAGCCATCTCAGCGTAAGGTGGGGGCCAGTAAGTaGGCGGGCCACCTGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PGHVCPGIAGSPQPSQRKVGASK*AGHLQR Trigger: CCTCTGCAGGTGGCCCGCTCACTTACTGGCCCCCAC...CTTACGCTGAGATGGCTGAGGACTACCCGCGATACCCGGACATACATGACCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
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| 3UTR-3UTR GCA 90 bp | TGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGTCAGATGCCGCAGCCGGGCCTaGAGGAATTCATTTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: CRGTSGRVGWLQPGATVRCRSRA*RNSFVR Trigger: CCTGACAAATGAATTCCTGCAGGCCCGGCTGCGGCA...TCTGACAGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAGGACTCCAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGTTCACCACAGGCAAGTaGCGCAGGCCCATGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LPGLQASEQTGEWEPSCRFTTGK*RRPMVL Trigger: CAGAACCATGGGCCTGCGCCACTTGCCTGTGGTGAA...CCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTGGAGTCCTGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
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| 3UTR CAA 90 bp | GCTCGAGTAGCGACCACAACAGGGGCCATTGGCTTTCTCCTAAGGTaGGACCTTTGGTCGGTCCTGGCTCAGGACAGCTTGCTTGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: ARVATTTGAIGFLLR*DLWSVLAQDSLLAS Trigger: GCTGGCAAGCAAGCTGTCCTGAGCCAGGACCGACCAAAGGTCCAACCTTAGGAGAAAGCCAATGGCCCCTGTTGTGGTCGCTACTCGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCCACGGGGTCAGAGCATGAACCCGCTCCTAGGAAACAGAAGGAGAAGAAAGAGCCCGACGGCACCCTaGCGTCTCCTTAGGGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: KPRGQSMNPLLGNRRRRKSPTAP*RLLRGA Trigger: AGCTCCCCTAAGGAGACGTCAGGGTGCCGTCGGGCT...CTTTCTTCTCCTTCTGTTTCCTAGGAGCGGGTTCATGCTCTGACCCCGTGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| 3UTR-3UTR TCA 90 bp | GACCCACCAGCCCCGTACAGACGCCAATGGCGAACACCACCATCCACTTCACCGGGTCTTCAGGACACCTaGAAGATGTCTGATGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: DPPAPYRRQWRTPPSTSPGLQDT*KMSDGS Trigger: GCTGCCATCAGACATCTTTCAGGTGTCCTGAAGACC...CGGTGAAGTGGATGGTGGTGTTCGCCATTGGCGTCTGTACGGGGCTGGTGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
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| 3UTR-3UTR TCA 90 bp | AGACCCACCAGCCCCGTACAGACGCCAATGGCGAACACCACCATCCACTTCACCCCAGGTAAGGGTCATTaGTGCAGCGGTCATAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: RPTSPVQTPMANTTIHFTPGKGH*CSGHSP Trigger: TGGACTATGACCGCTGCATCAATGACCCTTACCTGG...GGTGAAGTGGATGGTGGTGTTCGCCATTGGCGTCTGTACGGGGCTGGTGGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
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| 3UTR CAA 90 bp | AGCGACCACAACAGGGGCCATTGGCTTTCTCCTAAGGTTGGACCTTaGGTCGGTCCTGGCTCAGGACAGCTTGCTTGCCAGCTTGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: SDHNRGHWLSPKVGP*VGPGSGQLACQLVE Trigger: CTCTACAAGCTGGCAAGCAAGCTGTCCTGAGCCAGGACCGACCAAAGGTCCAACCTTAGGAGAAAGCCAATGGCCCCTGTTGTGGTCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR CAA 90 bp | GTATCGCGGGTAGTCCTCAGCCATCTCAGCGTAAGAAAGACGTGGTaGGCTGGCACTGGACTGACTTTCCGAATAGCACACTCCTCGGAC | + |
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Preference number: 2 (lower is better) Translates to: VSRVVLSHLSVRKTW*AGTGLTFRIAHSSD Trigger: GTCCGAGGAGTGTGCTATTCGGAAAGTCAGTCCAGTGCCAGCCAACCACGTCTTTCTTACGCTGAGATGGCTGAGGACTACCCGCGATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
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| 3UTR-3UTR TCA 90 bp | GGCCGTGGAACAATTTCCCGAGTGCTGGTCAGAGGACTCTGCCAGGCCTGGTGGAGAAAGTTGGGCCAATaGAGAGGCAGAATGTATCTG | + |
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Preference number: 2 (lower is better) Translates to: GRGTISRVLVRGLCQAWWRKLGQ*RGRMYL Trigger: CAGATACATTCTGCCTCTTCATTGGCCCAACTTTCT...CCACCAGGCCTGGCAGAGTCCTCTGACCAGCACTCGGGAAATTGTTCCACGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR-3UTR TCA 90 bp | TACCCAACTCCCACAGCAGTACCGGAGCCACACAAATGCCCAGGCGCAGAAGCCTGGGTTGCAGGAAGATaGATGCAAATGTCCCTACTC | + |
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Preference number: 2 (lower is better) Translates to: YPTPTAVPEPHKCPGAEAWVAGR*MQMSLL Trigger: GAGTAGGGACATTTGCATTCATCTTCCTGCAACCCA...GGCTTCTGCGCCTGGGCATTTGTGTGGCTCCGGTACTGCTGTGGGAGTTGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR-3UTR CCA 90 bp | TATCCAAAGAACAGCTGCCACAAGGGCCTTGGGTTGCAGGAAGATGAATGCAAACATCCCACTCCTACCTaGGCCCCGAGACCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: YPKNSCHKGLGLQEDECKHPTPT*APRPAA Trigger: GGCTGCTGGTCTCGGGGCCCAGGTAGGAGTGGGATG...TTTGCATTCATCTTCCTGCAACCCAAGGCCCTTGTGGCAGCTGTTCTTTGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGTTGGACCTTTGGTCGGTCCTGGCTCAGGACAGCTTGCTTGCCAGCTTGGCTGTCCCCCTGTGGTaGGATTTAATGCTTCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LRLDLWSVLAQDSLLASLAVPLW*DLMLQR Trigger: CCTTTGAAGCATTAAATCCCACCACAGGGGGACAGC...CAAGCTGGCAAGCAAGCTGTCCTGAGCCAGGACCGACCAAAGGTCCAACCTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGTTGGACCTTTGGTCGGTCCTGGCTCAGGACAGCTTGCTTGCCAGCTTGAGGGGAGCTGGGGAATaGAAGATTCTTACAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LRLDLWSVLAQDSLLASLRGAGE*KILTEE Trigger: TTCCTCTGTAAGAATCTTCCATTCCCCAGCTCCCCT...CAAGCTGGCAAGCAAGCTGTCCTGAGCCAGGACCGACCAAAGGTCCAACCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGAGCATGAACCCGCTCCTAGGAAACAGAAGGAGAAGAAAGTTGGGCCAAGGTCTGGGCAAGAGCTaGGCTCTCCAAGAAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: GQSMNPLLGNRRRRKLGQGLGKS*ALQETA Trigger: TGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACC...TTGGCCCAACTTTCTTCTCCTTCTGTTTCCTAGGAGCGGGTTCATGCTCTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAATGAGTCTAAAGACATTCAAGCCACGGGGTCAGAGCATGAACCCGCTCGGTCTGGGCAAGAGCTaGGCTCTCCAAGAAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: SGMSLKTFKPRGQSMNPLGLGKS*ALQETA Trigger: TGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACC...GAGCGGGTTCATGCTCTGACCCCGTGGCTTGAATGTCTTTAGACTCATTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCGTGGAACAATTTCCCGAGTGCTGGTCAGAGGACTCTGCCAGGCCTGGTGGGGGGTTCCTCAATTTTaGTTGACTTTGGGAATGAAT | + |
|
Preference number: 2 (lower is better) Translates to: GRGTISRVLVRGLCQAWWGVPQF*LTLGMN Trigger: ATTCATTCCCAAAGTCAACCAAAATTGAGGAACCCC...CCACCAGGCCTGGCAGAGTCCTCTGACCAGCACTCGGGAAATTGTTCCACGGCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCGGAGCCACACAAATGCCCAGGCGCAGAAGCCAGCCAGGAAACTGCCTCAAGTTGCAGGAAGATGAATaGAAATGTCCCTACTCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: TGATQMPRRRSQPGNCLKLQEDE*KCPYSD Trigger: ATCTGAGTAGGGACATTTGCATTCATCTTCCTGCAA...CTTGAGGCAGTTTCCTGGCTGGCTTCTGCGCCTGGGCATTTGTGTGGCTCCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR-3UTR CCA 90 bp | TACCCAACTCCCACAGCAGTACCGGAGCCACACAAATGCCCAGGCGCAGAAGCCTCAAAGGCTGTTAGCTaGAATTTTAGTGCATCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: YPTPTAVPEPHKCPGAEASKAVS*NFSASR Trigger: CCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGA...GGCTTCTGCGCCTGGGCATTTGTGTGGCTCCGGTACTGCTGTGGGAGTTGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR-3UTR CCA 90 bp | GGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGCCTTCATGCCGGCTGTaGGGGCCAGTAAGTGAGCGG | + |
|
Preference number: 2 (lower is better) Translates to: GFNASKAVSWNFSASRIWPSCRL*GPVSER Trigger: CCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGG...CCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGTTCCTCAATTTTGGTTGACTTTGGGAATGAATCCAAGATAAAGTTGTGGCCTTCATGCCGGCTGTaGGGGCCAGTAAGTGAGCGG | + |
|
Preference number: 2 (lower is better) Translates to: RGSSILVDFGNESKIKLWPSCRL*GPVSER Trigger: CCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGG...CCACAACTTTATCTTGGATTCATTCCCAAAGTCAACCAAAATTGAGGAACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCAATGGCGAACACCACCATCCACTTCACCGCCTCGTATCTTCGCCCTTTCTTCTCATAGTCTTTCCTTaGAAGAATCTCATCCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ANGEHHHPLHRLVSSPFLLIVFP*KNLILF Trigger: GAAGAGGATGAGATTCTTCCAAGGAAAGACTATGAG...AAGAAAGGGCGAAGATACGAGGCGGTGAAGTGGATGGTGGTGTTCGCCATTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
||
| 3UTR CAA 90 bp | GAGAAGAAAGTTGGGCCAATGAAGAGGCAGAATGTATCTGAAGTCTaGGTTCTGATCCCAGGCCTCCCCAAACATGGGGAACAGTTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: EKKVGPMKRQNVSEV*VLIPGLPKHGEQFL Trigger: TAAGAACTGTTCCCCATGTTTGGGGAGGCCTGGGATCAGAACCAAGACTTCAGATACATTCTGCCTCTTCATTGGCCCAACTTTCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACCTAGTAATGAACATGATATGCAAATAACATCCTCAATGTTTGCCTCAGTCCTGCAGAGGCACCTCTaGGAGAGTGGGCTGGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: EPSNEHDMQITSSMFASVLQRHL*ESGLAS Trigger: TGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAG...GACTGAGGCAAACATTGAGGATGTTATTTGCATATCATGTTCATTACTAGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR-3UTR CCA 90 bp | TATCCAAAGAACAGCTGCCACAAGGGCCTTGGGTTGCAGGAAGATGAATGCAAAGAAGGAGAAGAAAGTTaGGCCAATGAAGAGGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: YPKNSCHKGLGLQEDECKEGEES*ANEEAE Trigger: TTCTGCCTCTTCATTGGCCCAACTTTCTTCTCCTTC...TTTGCATTCATCTTCCTGCAACCCAAGGCCCTTGTGGCAGCTGTTCTTTGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAAATGGTGAAGGATTCATATATGGGGTGACATCCACAATCATTCGGGGATTCGTGGTTGGCTGGCACTaGACTGACTTTCCGAATAGC | + |
|
Preference number: 2 (lower is better) Translates to: VNGEGFIYGVTSTIIRGFVVGWH*TDFPNS Trigger: GCTATTCGGAAAGTCAGTCCAGTGCCAGCCAACCAC...GAATCCCCGAATGATTGTGGATGTCACCCCATATATGAATCCTTCACCATTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| 3UTR CAA 90 bp | TTCACCAGGACTCTGGTAGTGGTTCTGTCTAGGGGTTCCTCAATTTaGGTTGACTTTGGGAATGAATCCAAGATAAAGTTGTGGCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: FTRTLVVVLSRGSSI*VDFGNESKIKLWLS Trigger: GGACAGCCACAACTTTATCTTGGATTCATTCCCAAAGTCAACCAAAATTGAGGAACCCCTAGACAGAACCACTACCAGAGTCCTGGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGGTTCTGTCTAGGGGTTCCTCAATTTTGGTTGACTTTGGGAATGAATCCAAGAACATCCTCAATGTTTaGCTCAGTCCAACACCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: VVLSRGSSILVDFGNESKNILNV*LSPTPS Trigger: GGAAGGTGTTGGACTGAGGCAAACATTGAGGATGTT...CTTGGATTCATTCCCAAAGTCAACCAAAATTGAGGAACCCCTAGACAGAACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR-3UTR CCA 90 bp | CCGTCCCAGCTGGAACTGCTTAACAAGGTCACATGCAGACATCTCATAAAATACAGTGCATCAAGGATCTaGTCAGGAATGAGTCTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PSQLELLNKVTCRHLIKYSASRI*SGMSLK Trigger: CTTTAGACTCATTCCTGACCAGATCCTTGATGCACT...GTATTTTATGAGATGTCTGCATGTGACCTTGTTAAGCAGTTCCAGCTGGGACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR-3UTR CCA 90 bp | GGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGGAAGGAGAAGAAAGTTaGGCCAATGAAGAGGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GFNASKAVSWNFSASRIWEGEES*ANEEAE Trigger: TTCTGCCTCTTCATTGGCCCAACTTTCTTCTCCTTC...CCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACCTAGTAATGAACATGATATGCAAATAACATCCTCAATGTTTGCCTCAGTCAGGGGAGCTGGGGAATaGAAGATTCTTACAGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: EPSNEHDMQITSSMFASVRGAGE*KILTEE Trigger: TTCCTCTGTAAGAATCTTCCATTCCCCAGCTCCCCT...GACTGAGGCAAACATTGAGGATGTTATTTGCATATCATGTTCATTACTAGGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | GAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTaGGGGCCAGTAAGTGAGCGGGCCACCTGCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: EQTGEWEPSCRL*GPVSERATCRG Trigger: GCCTCTGCAGGTGGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | GTGAGCGGGCCACCTGCAGAGGCACCTCTGGGAGAGTaGGCTGGCTTCAGCCGGGTGCAACTGTCAGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VSGPPAEAPLGE*AGFSRVQLSEG Trigger: ACCCTCTGACAGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGCCCGCTCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| 3UTR GCA 72 bp | CAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATaGCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: QASEQTGEWEPS*RLWGPVSERAT Trigger: GGTGGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| 3UTR GCA 72 bp | CCCCTACAAGTCCTCGGGAAGAGGCCGAGTCGGGAGTaGACTGGGAAGCTGGGCTCGAGTAGCGACCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: PLQVLGKRPSRE*TGKLGSSSDHN Trigger: GTTGTGGTCGCTACTCGAGCCCAGCTTCCCAGTGCACTCCCGACTCGGCCTCTTCCCGAGGACTTGTAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | ACAGGAGCCAAGGGCAACTCTCCTTGTCAACATGGCTaGGCCAGGAAGGCTGGGCTGGCCTCTCCGGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TGAKGNSPCQHG*ARKAGLASPEA Trigger: AGCTTCCGGAGAGGCCAGCCCAGCCTTCCTGGCCCAGCCATGTTGACAAGGAGAGTTGCCCTTGGCTCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | CTTCCAGGACTCCAGGCATCTGAGCAAACGGGTGAGTaGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LPGLQASEQTGE*EPSCRLWGPVS Trigger: ACTTACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTGGAGTCCTGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| 3UTR TCA 72 bp | CCAAGTGTCCACCTAGGATCCAGCCCGACGGCACCCTaGCGTCTCCTTAGGGGAGCTGGGGAATGGAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: PSVHLGSSPTAP*RLLRGAGEWKI Trigger: AATCTTCCATTCCCCAGCTCCCCTAAGGAGACGTCAGGGTGCCGTCGGGCTGGATCCTAGGTGGACACTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR GCA 72 bp | TACCCAACTCCCACAGCAGTACCGGAGCCACACAAATaGCCAGGCGCAGAAGCCAGCCAGGAAACTGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: YPTPTAVPEPHK*PGAEASQETAS Trigger: TGAGGCAGTTTCCTGGCTGGCTTCTGCGCCTGGGCATTTGTGTGGCTCCGGTACTGCTGTGGGAGTTGGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | CCACAAAGAGACCCACCAGCCCCGTACAGACGCCAATaGCGAACACCACCATCCACTTCACCGCCTCGTATC | + |
|
Preference number: 3 (lower is better) Translates to: PQRDPPAPYRRQ*RTPPSTSPPRI Trigger: GATACGAGGCGGTGAAGTGGATGGTGGTGTTCGCCATTGGCGTCTGTACGGGGCTGGTGGGTCTCTTTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
||
| 3UTR CCA 72 bp | CTCCTTGTCAACATGGCTGGGCCAGGAAGGCTGGGCTaGCCTCTCCGGAAGCTTTCTTGTCACCAAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLVNMAGPGRLG*PLRKLSCHQGL Trigger: CAGACCTTGGTGACAAGAAAGCTTCCGGAGAGGCCAGCCCAGCCTTCCTGGCCCAGCCATGTTGACAAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | ACAGGGGCCATTGGCTTTCTCCTAAGGTTGGACCTTTaGTCGGTCCTGGCTCAGGACAGCTTGCTTGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TGAIGFLLRLDL*SVLAQDSLLAS Trigger: GCTGGCAAGCAAGCTGTCCTGAGCCAGGACCGACCAAAGGTCCAACCTTAGGAGAAAGCCAATGGCCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | TGGGCCAGGGTGGGTATGCCTGGACCCTGTCCACTCTaGGCTAAACTGATGGTCACACACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: WARVGMPGPCPL*AKLMVTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGACCATCAGTTTAGCCCAGAGTGGACAGGGTCCAGGCATACCCACCCTGGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | CAACTCTCCTTGTCAACATGGCTGGGCCAGGAAGGCTaGGCTGGCCTCTCCGGAAGCTTTCTTGTCACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QLSLSTWLGQEG*AGLSGSFLVTK Trigger: CTTGGTGACAAGAAAGCTTCCGGAGAGGCCAGCCCAGCCTTCCTGGCCCAGCCATGTTGACAAGGAGAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR TCA 72 bp | CAACAGGACTGGCTTGGAGGCAGGGAAGCTGTGGACTaGGGTCCTCCACAGGCTACAATTCTGCAAACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QQDWLGGREAVD*GPPQATILQTH Trigger: GTGGGTTTGCAGAATTGTAGCCTGTGGAGGACCTCAGTCCACAGCTTCCCTGCCTCCAAGCCAGTCCTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR TCA 72 bp | ATGACCGAAAGGCGGAAGCTGCAACTGGACAGTCTCTaGGGTCCACAGGAGCCAAGGGCAACTCTCCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: MTERRKLQLDSL*GPQEPRATLLV Trigger: GACAAGGAGAGTTGCCCTTGGCTCCTGTGGACCTCAGAGACTGTCCAGTTGCAGCTTCCGCCTTTCGGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | AGTCCAACACCTTCCCGGGAGGGTCTGGGCAAGAGCTaGGCTCTCCAAGAAACAGCAACAGAGAGGTACCAA | + |
|
Preference number: 3 (lower is better) Translates to: SPTPSREGLGKS*ALQETATERYQ Trigger: TTGGTACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACCCTCCCGGGAAGGTGTTGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | ATGTTTGCCTCAGTCCAACACCTTCCCGGGAGGGTCTaGGCAAGAGCTGGGCTCTCCAAGAAACAGCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: MFASVQHLPGRV*ARAGLSKKQQQ Trigger: CTGTTGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACCCTCCCGGGAAGGTGTTGGACTGAGGCAAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGGCCGTGGAACAATTTCCCGAGTGCTGGTCAGAGGACTCTGCCAGGCCTGGAATGTATCTGAAGTCTaGGTTCTGATCCCAGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HGRGTISRVLVRGLCQAWNVSEV*VLIPGL Trigger: GAGGCCTGGGATCAGAACCAAGACTTCAGATACATT...CCAGGCCTGGCAGAGTCCTCTGACCAGCACTCGGGAAATTGTTCCACGGCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR GCA 72 bp | CGCAGCCGGGCCTGCAGGAATTCATTTGTCAGGTTGTaGCGTGTAATGATCCCCACGATCTCTCCTACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSRACRNSFVRL*RVMIPTISPTA Trigger: TGCAGTAGGAGAGATCGTGGGGATCATTACACGGCACAACCTGACAAATGAATTCCTGCAGGCCCGGCTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| 3UTR CCA 72 bp | CCCACGATCTCTCCTACTGCATTCACCACAGGCAAGTaGCGCAGGCCCATGGTTCTGAACAGGTTGAACACT | + |
|
Preference number: 3 (lower is better) Translates to: PTISPTAFTTGK*RRPMVLNRLNT Trigger: AGTGTTCAACCTGTTCAGAACCATGGGCCTGCGCCACTTGCCTGTGGTGAATGCAGTAGGAGAGATCGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| 3UTR CCA 72 bp | GAGACTGAGCCACTAGTTCGAAGGGACTGCCATGGGTaGAGGGGTCCACGGCTTAGTTATAGTTCACAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ETEPLVRRDCHG*RGPRLSYSSQV Trigger: CACCTGTGAACTATAACTAAGCCGTGGACCCCTCCACCCATGGCAGTCCCTTCGAACTAGTGGCTCAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAACTGTCAGAGGGTCTGGTAATGCTGCCGCAGCCGGGCCTGCAGGAATTCATGAACAGGTTGAACACTaGAGAAACATGGGTGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ATVRGSGNAAAAGPAGIHEQVEH*RNMGVG Trigger: CCCAACACCCATGTTTCTCAAGTGTTCAACCTGTTC...ATGAATTCCTGCAGGCCCGGCTGCGGCAGCATTACCAGACCCTCTGACAGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| 3UTR GCA 72 bp | AAGCTGTGGACTGAGGTCCTCCACAGGCTACAATTCTaGAAACCCACCAGGCTGGGAAGACAGTTCTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: KLWTEVLHRLQF*KPTRLGRQFCG Trigger: ACCACAGAACTGTCTTCCCAGCCTGGTGGGTTTGCAGAATTGTAGCCTGTGGAGGACCTCAGTCCACAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | CCTCAGCCATCTCAGCGTAAGAAAGACGTGGTTGGCTaGCACTGGACTGACTTTCCGAATAGCACACTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PQPSQRKKDVVG*HWTDFPNSTLL Trigger: GAGGAGTGTGCTATTCGGAAAGTCAGTCCAGTGCCAGCCAACCACGTCTTTCTTACGCTGAGATGGCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| 3UTR TCA 72 bp | TCCGAGAGGACCAGCAGCCAGGAGAGAAAGAAGCCATaGAGTAATGAAGCACAAGGGCAAGAGCATCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SERTSSQERKKP*SNEAQGQEHPT Trigger: AGTGGGATGCTCTTGCCCTTGTGCTTCATTACTTCATGGCTTCTTTCTCTCCTGGCTGCTGGTCCTCTCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR GCA 72 bp | GGTTGGACCTTTGGTCGGTCCTGGCTCAGGACAGCTTaGTTGCCAGCTTGTAGAGTGATCTCAAATTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: GWTFGRSWLRTA*LPACRVISNSP Trigger: TGGTGAATTTGAGATCACTCTACAAGCTGGCAAGCAAGCTGTCCTGAGCCAGGACCGACCAAAGGTCCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR GCA 72 bp | AGCTGCCACAAGGGCCTTGGGTTGCAGGAAGATGAATaGAAATGTCCCTACTCAGATGTTGGTTCCGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SCHKGLGLQEDE*KCPYSDVGSER Trigger: CCTCTCGGAACCAACATCTGAGTAGGGACATTTGCATTCATCTTCCTGCAACCCAAGGCCCTTGTGGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR TCA 72 bp | TTCCTGTGTCTCCCCAAGGATGGTCTTCAGGACACCTaGAAGATGTCTGATGGCAGCTTCGTTGGAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FLCLPKDGLQDT*KMSDGSFVGGE Trigger: TTCTCCTCCAACGAAGCTGCCATCAGACATCTTTCAGGTGTCCTGAAGACCATCCTTGGGGAGACACAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
||
| 3UTR TCA 72 bp | CCTGGCTCAGGACAGCTTGCTTGCCAGCTTGTAGAGTaGTCTCAAATTCACCAGGACTCTGGTAGTGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PGSGQLACQLVE*SQIHQDSGSGS Trigger: AGAACCACTACCAGAGTCCTGGTGAATTTGAGATCACTCTACAAGCTGGCAAGCAAGCTGTCCTGAGCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR TCA 72 bp | TCACCAAGGTCTGCATCAAACTGTCACATGGCTAGCTaGGTCAAGCTAATGTCCGTCCCAGCTGGAACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SPRSASNCHMAS*VKLMSVPAGTA Trigger: AGCAGTTCCAGCTGGGACGGACATTAGCTTGACTCAGCTAGCCATGTGACAGTTTGATGCAGACCTTGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | TCCTCCACAGGCTACAATTCTGCAAACCCACCAGGCTaGGAAGACAGTTCTGTGGTGTGTCACACTTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSTGYNSANPPG*EDSSVVCHTFL Trigger: GAGAAAAGTGTGACACACCACAGAACTGTCTTCCCAGCCTGGTGGGTTTGCAGAATTGTAGCCTGTGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGTCCCAGCTGGAACTGCTTAACAAGGTCACATGCAGACATCTCATAAAATACGCTGCCACAAGGGCCTaGGGTTGCAGGAAGATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PSQLELLNKVTCRHLIKYAATRA*GCRKMN Trigger: ATTCATCTTCCTGCAACCCAAGGCCCTTGTGGCAGC...GTATTTTATGAGATGTCTGCATGTGACCTTGTTAAGCAGTTCCAGCTGGGACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR TCA 72 bp | GAAGAAAGTTGGGCCAATGAAGAGGCAGAATGTATCTaGAGTCTTGGTTCTGATCCCAGGCCTCCCCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: EESWANEEAECI*SLGSDPRPPQT Trigger: TGTTTGGGGAGGCCTGGGATCAGAACCAAGACTTCAGATACATTCTGCCTCTTCATTGGCCCAACTTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR TCA 72 bp | CCCCAAGGATGGTCTTCAGGACACCTGAAAGATGTCTaGTGGCAGCTTCGTTGGAGGAGAAAATTCGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PQGWSSGHLKDV*WQLRWRRKFVF Trigger: AAACACGAATTTTCTCCTCCAACGAAGCTGCCATCAGACATCTTTCAGGTGTCCTGAAGACCATCCTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
||
| 3UTR GCA 72 bp | TGTATCCAAAGAACAGCTGCCACAAGGGCCTTGGGTTaGAGGAAGATGAATGCAAATGTCCCTACTCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: CIQRTAATRALG*RKMNANVPTQM Trigger: CATCTGAGTAGGGACATTTGCATTCATCTTCCTGCAACCCAAGGCCCTTGTGGCAGCTGTTCTTTGGATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR GCA 72 bp | TGTCCGTCCCAGCTGGAACTGCTTAACAAGGTCACATaGAGACATCTCATAAAATACCCAACTCCCACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CPSQLELLNKVT*RHLIKYPTPTA Trigger: TGCTGTGGGAGTTGGGTATTTTATGAGATGTCTGCATGTGACCTTGTTAAGCAGTTCCAGCTGGGACGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | GTAAGTCAAGCTCTTTCTGGTAAAAAGGTAAGCAAATaGGGAAAACAGAGGGCCAGGGTCACTGTCAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: VSQALSGKKVSK*GKQRARVTVSP Trigger: AGGGCTGACAGTGACCCTGGCCCTCTGTTTTCCCCATTTGCTTACCTTTTTACCAGAAAGAGCTTGACTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCACATGTATCCAAAGAACAGCTGCCACAAGGGCCTTGGGTTGCAGGAAGAGTTCCTCAATTTTGGTaGACTTTGGGAATGAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: MPHVSKEQLPQGPWVAGRVPQFW*TLGMNP Trigger: TGGATTCATTCCCAAAGTCAACCAAAATTGAGGAAC...TCTTCCTGCAACCCAAGGCCCTTGTGGCAGCTGTTCTTTGGATACATGTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGCGGCCAAACACAACCATGCTTAGCTATTTTCCCAACTACTTGGGAAGAGAGGGGTTCCTCAATTTaGGTTGACTTTGGGAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: GSGQTQPCLAIFPTTWEERGSSI*VDFGNE Trigger: TTCATTCCCAAAGTCAACCAAAATTGAGGAACCCCT...CTCTTCCCAAGTAGTTGGGAAAATAGCTAAGCATGGTTGTGTTTGGCCGCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | GAATGTTCACAGAAGGGAGAAGCTGTCCCCCTGTGGTaGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: ECSQKGEAVPLW*DLMLQRLLAGI Trigger: AATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCACCACAGGGGGACAGCTTCTCCCTTCTGTGAACATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR TCA 72 bp | TTGAGAAACATGGGTGTTGGGGGAGACGGTAAATGGTaGAGGATTCATATATGGGGTGACATCCACAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: LRNMGVGGDGKW*RIHIWGDIHNH Trigger: ATGATTGTGGATGTCACCCCATATATGAATCCTTCACCATTTACCGTCTCCCCCAACACCCATGTTTCTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| 3UTR TCA 72 bp | AAGATAAAGTTGTGGCTGTCCCACCAGGAAGACAGATaGAGGCTTAGAAAGTCGAGTAGTTGTAGAGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KIKLWLSHQEDR*RLRKSSSCREE Trigger: TTCCTCTCTACAACTACTCGACTTTCTAAGCCTTCATCTGTCTTCCTGGTGGGACAGCCACAACTTTATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | AAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTaGTCAGGAATGAGTCTAAAGACATTCAAGCCACGG | + |
|
Preference number: 3 (lower is better) Translates to: KAVSWNFSASRI*SGMSLKTFKPR Trigger: CCGTGGCTTGAATGTCTTTAGACTCATTCCTGACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR CCA 72 bp | CCTGTGGTGGGATTTAATGCTTCAAAGGCTGTTAGCTaGAATTTTAGTGCATCAAGGATCTGGTCAGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: PVVGFNASKAVS*NFSASRIWSGM Trigger: CATTCCTGACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCACCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTTCTGTCTAGGGGTTCCTCAATTTTGGTTGACTTTGGGAATGAATCCAAGCTTAGTGCCCAATTCTaGAACCTAGTAATGAACATG | + |
|
Preference number: 3 (lower is better) Translates to: VVLSRGSSILVDFGNESKLSAQF*NLVMNM Trigger: CATGTTCATTACTAGGTTCAAGAATTGGGCACTAAG...CTTGGATTCATTCCCAAAGTCAACCAAAATTGAGGAACCCCTAGACAGAACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCATCAGCTCCTCGGGGGTaGGGCTCTCCCGTTCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: QASEQTGEWEPSCRLWGPSAPRG*GSPVHR Trigger: GCGGTGAACGGGAGAGCCGCACCCCCGAGGAGCTGA...TGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAAGGGCAACTCTCCTTGTCAACATGGCTGGGCCAGGAAGGCTGGGCTGGCTCAGCTCCTCGGGGGTaGGGCTCTCCCGTTCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: SQGQLSLSTWLGQEGWAGSAPRG*GSPVHR Trigger: GCGGTGAACGGGAGAGCCGCACCCCCGAGGAGCTGA...GCCAGCCCAGCCTTCCTGGCCCAGCCATGTTGACAAGGAGAGTTGCCCTTGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGCGGGCCACCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGCTCATCACACACGTTaGGCAGCTCGCTGGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGPPAEAPLGEWAGFSRAHHTR*AARWKG Trigger: ACCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGC...CCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGCCCGCTCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGCGGGCCACCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTTCTCCGTGACCACTaGGAAGGCATGGTGGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGPPAEAPLGEWAGFSRVLRDH*EGMVDR Trigger: ACGGTCCACCATGCCTTCCCAGTGGTCACGGAGAAC...CCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGCCCGCTCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGCGGGCCACCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGTACGACTTCATGGACTaGCCCCGCTTGCGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSGPPAEAPLGEWAGFSRYDFMD*PRLRCS Trigger: TGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTA...CCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGCCCGCTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGTCATGCCCCGGTTCTCCGTaGCCACTGGGAAGGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAEAPLGEWAGFSRVQLSCPGSP*PLGRHG Trigger: ACCATGCCTTCCCAGTGGTCACGGAGAACCGGGGCA...TGACAGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR TCA 90 bp | TCATGCCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCACCTGCAGAGGCACCTCTAGAGCACTTTCCACGTaGGCCCCTGGTTCCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCRLWGPVSERATCRGTSRALST*APGSRR Trigger: CCTTCTGGAACCAGGGGCTCACGTGGAAAGTGCTCT...AGAGGTGCCTCTGCAGGTGGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGCGGGCCACCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGCACTGGGGACAGATGTaGCAAAAGTCCAGCATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSGPPAEAPLGEWAGFSRHWGQM*QKSSMR Trigger: TCGCATGCTGGACTTTTGGCACATCTGTCCCCAGTG...CCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGCCCGCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCACCTGCAGAGGCCCCACCCAAGAAAGCTaGCGCACCAATCAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EPSCRLWGPVSERATCRGPTQES*RTNQGK Trigger: TTTGCCCTGATTGGTGCGGCAGCTTTCTTGGGTGGG...GCCTCTGCAGGTGGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | ACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCCCGTACAGACGCCAATaGCGAACACCACCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TGEWEPSCRLWGPVSERAPYRRQ*RTPPST Trigger: AGTGGATGGTGGTGTTCGCCATTGGCGTCTGTACGG...GGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGCGGGCCACCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGCACCACTGTGGATCATaGGGCCTTCTTTCCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VSGPPAEAPLGEWAGFSRHHCGS*GLLSPQ Trigger: TTGTGGGGAAAGAAGGCCCCATGATCCACAGTGGTG...CCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGCCCGCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCACCTGCAGAGGCCCAGGTAAGGGTCATTaGTGCAGCGGTCATAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPSCRLWGPVSERATCRGPGKGH*CSGHSP Trigger: TGGACTATGACCGCTGCATCAATGACCCTTACCTGG...GCCTCTGCAGGTGGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAAGGGCAACTCTCCTTGTCAACATGGCTGGGCCAGGAAGGCTGGGCTGGCGGCAGCCCTTCTGACTaGATTCCTCCACCGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQGQLSLSTWLGQEGWAGGSPSD*IPPPLQ Trigger: CTGCAGCGGTGGAGGAATGCAGTCAGAAGGGCTGCC...GCCAGCCCAGCCTTCCTGGCCCAGCCATGTTGACAAGGAGAGTTGCCCTTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGGGAAACGCTCCTCCATaGTCCAGTCTTCACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RHLSKRVSGSLHAGCGGQGNAPP*SSLHSG Trigger: CCCCGAGTGAAGACTGGACCATGGAGGAGCGTTTCC...CTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGTCAGCCCTCCAGACACACTaGACAGCACCCCAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PAEAPLGEWAGFSRVQLSALQTH*TAPQRL Trigger: AAGTCTTTGGGGTGCTGTTCAGTGTGTCTGGAGGGC...TGACAGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR TCA 90 bp | GAGTGCTGGTCAGAGGACTCTGCCAGGCCTGGTGGCCACACTACTAGAAGCCAACCAGGAGGCCCCCAATaGCCCCCATCACGACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ECWSEDSARPGGHTTRSQPGGPQ*PPSRRR Trigger: TCTTCGTCGTGATGGGGGTCATTGGGGGCCTCCTGG...TTGGCTTCTAGTAGTGTGGCCACCAGGCCTGGCAGAGTCCTCTGACCAGCACTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGGACTCCAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGGCAAGGCAGCCCTTCTaGCTGCATTCCTCCACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGLQASEQTGEWEPSCRARQPF*LHSSTA Trigger: AGCGGTGGAGGAATGCAGTCAGAAGGGCTGCCTTGC...CCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTGGAGTCCTGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCACTCCTCTCCAGCATCTaGTGTAGCAGGTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QASEQTGEWEPSCRLWGPLLSSI*CSRSSF Trigger: GAAGGAGGACCTGCTACAGCAGATGCTGGAGAGGAG...TGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGTCAGAGGTTCCACGTGAGCCCCTaGTTCCAGAAGGATGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: QRHLWESGLASAGCNCQRFHVSP*FQKDEP Trigger: GGGTTCATCCTTCTGGAACCAGGGGCTCACGTGGAA...CCTCTGACAGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGCATCCCACTCCTACCTGGGCCCCGAGACCAGCAGCCACACAGGTTCCTCTTCACTCGGGGACTaGTCAGGGTATAGGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARASHSYLGPETSSHTGSSSLGD*SGYRLG Trigger: CCCCAACCTATACCCTGACCAGTCCCCGAGTGAAGA...GGAACCTGTGTGGCTGCTGGTCTCGGGGCCCAGGTAGGAGTGGGATGCTCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCCTCAGTCCAACACCTTCCCGGGAGGGTCTGGGCAAGAGCTGGGCTCTCCTTCACCACAGGCAAGTaGCGCAGGCCCATGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FASVQHLPGRVWARAGLSFTTGK*RRPMVL Trigger: CAGAACCATGGGCCTGCGCCACTTGCCTGTGGTGAA...GGAGAGCCCAGCTCTTGCCCAGACCCTCCCGGGAAGGTGTTGGACTGAGGCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | GCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAGCCCTCCAGACACACTaGACAGCACCCCAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: ASEQTGEWEPSCRLWGPVALQTH*TAPQRL Trigger: AAGTCTTTGGGGTGCTGTTCAGTGTGTCTGGAGGGC...TACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | AGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGCAGACTCCTGGGAGTTaGAGAAGAGTGTGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RHLSKRVSGSLHAGCGGQQTPGS*RRVWPC Trigger: ACATGGCCACACTCTTCTTCAACTCCCAGGAGTCTG...CTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCCTCAGTCCAACACCTTCCCGGGAGGGTCTGGGCAAGAGCTGGGCTCTCCTCAGGTTGGGCTCCATaGTGTCACTGGCTCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FASVQHLPGRVWARAGLSSGWAP*CHWLSA Trigger: AGCTGAGAGCCAGTGACATCATGGAGCCCAACCTGA...GGAGAGCCCAGCTCTTGCCCAGACCCTCCCGGGAAGGTGTTGGACTGAGGCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGCTGGTCAGAGGACTCTGCCAGGCCTGGTGGCCACACTACTAGAAGCCAAGCACCCCAAAGACTTTaGAGAGCAGGGTCCGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ECWSEDSARPGGHTTRSQAPQRL*RAGSGA Trigger: GGCTCCGGACCCTGCTCTGCAAAGTCTTTGGGGTGC...TTGGCTTCTAGTAGTGTGGCCACCAGGCCTGGCAGAGTCCTCTGACCAGCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | AGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTCTTCCGTAAGGAGATaGTCTGGAACTGAGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RHLSKRVSGSLHAGCGGQSSVRR*SGTEGG Trigger: GCCTCCCTCAGTTCCAGAGCATCTCCTTACGGAAGA...CTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTATCACCAGAGACTGGATaGGAGTGTGCGGGTAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: ASEQTGEWEPSCRLWGPVSPETG*ECAGRR Trigger: ACGTCTACCCGCACACTCGCATCCAGTCTCTGGTGA...TACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | TCATGCCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCACCTGCAGAGGCACCTCTAGGATGGCAGACTCCTaGGAGTTGAAGAAGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCRLWGPVSERATCRGTSRMADS*ELKKSV Trigger: CACACTCTTCTTCAACTCCCAGGAGTCTGCCATCCT...AGAGGTGCCTCTGCAGGTGGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | CATGGCCGTGGAACAATTTCCCGAGTGCTGGTCAGAGGACTCTGCCAGGCCTGGGGAAACGCTCCTCCATaGTCCAGTCTTCACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HGRGTISRVLVRGLCQAWGNAPP*SSLHSG Trigger: CCCCGAGTGAAGACTGGACCATGGAGGAGCGTTTCC...CCAGGCCTGGCAGAGTCCTCTGACCAGCACTCGGGAAATTGTTCCACGGCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCACCTGCAGAGGCCATAAATGCCCTTGTTaGACAAGTCTCCAGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: EPSCRLWGPVSERATCRGHKCPC*TSLQST Trigger: AGTGGACTGGAGACTTGTTCAACAAGGGCATTTATG...GCCTCTGCAGGTGGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGGACTCCAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGTCAGGTTGGGCTCCATaGTGTCACTGGCTCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGLQASEQTGEWEPSCRSGWAP*CHWLSA Trigger: AGCTGAGAGCCAGTGACATCATGGAGCCCAACCTGA...CCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTGGAGTCCTGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | GATCCCCACGATCTCTCCTACTGCATTCACCACAGGCAAGTGGCGCAGGCCCATGCTGGTTGCCCTTCATaGACTCCTTCTCGTTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DPHDLSYCIHHRQVAQAHAGCPS*TPSRCP Trigger: GGGGCAACGAGAAGGAGTTCATGAAGGGCAACCAGC...ATGGGCCTGCGCCACTTGCCTGTGGTGAATGCAGTAGGAGAGATCGTGGGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR GCA 90 bp | TGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGTCAGAGGGGATTCCAGAACCTaGTGCCACTGGCTCTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: CRGTSGRVGWLQPGATVRGDSRT*CHWLYQ Trigger: TTGATAGAGCCAGTGGCAGCAGGTTCTGGAATCCCC...TCTGACAGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR GCA 90 bp | GCCACCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGCCAAAAGTCCAGCATaGGAGCAGGAAATAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ATCRGTSGRVGWLQPGATAKSPA*EQEIED Trigger: ATCCTCTATTTCCTGCTCGCATGCTGGACTTTTGGC...AGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGCACTGGGGACAGATGTaGCAAAAGTCCAGCATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EQTGEWEPSCRLWGPVSEHWGQM*QKSSMR Trigger: TCGCATGCTGGACTTTTGGCACATCTGTCCCCAGTG...CTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCCGTACAGACGCCAATGGCGAACACCACCATCCACTTCACCGCCTCGTTTTCCCAGCTTGCTTTaGACGGGGAAGCTGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PAPYRRQWRTPPSTSPPRFPSLL*TGKLDH Trigger: GTGATCCAGCTTCCCCGTGCAAAGCAAGCTGGGAAA...ACGAGGCGGTGAAGTGGATGGTGGTGTTCGCCATTGGCGTCTGTACGGGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
||
| CDS-3UTR CCA 90 bp | ACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCTCTTCTGATGTGACCTaGAGCTGGAATGAGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: TGEWEPSCRLWGPVSERASSDVT*SWNEPL Trigger: TAATGGCTCATTCCAGCTCCAGGTCACATCAGAAGA...GGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGTCAAGGATGGCAGACTCCTaGGAGTTGAAGAAGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAEAPLGEWAGFSRVQLSRMADS*ELKKSV Trigger: CACACTCTTCTTCAACTCCCAGGAGTCTGCCATCCT...TGACAGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CCA 90 bp | GAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGGTGGTTGGCTGGCACTaGACTGACTTTCCGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQTGEWEPSCRLWGPVSEVVGWH*TDFPNS Trigger: GCTATTCGGAAAGTCAGTCCAGTGCCAGCCAACCAC...CTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GGCCGTGGAACAATTTCCCGAGTGCTGGTCAGAGGACTCTGCCAGGCCTGGTGGGTGGTTGGCTGGCACTaGACTGACTTTCCGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGTISRVLVRGLCQAWWVVGWH*TDFPNS Trigger: GCTATTCGGAAAGTCAGTCCAGTGCCAGCCAACCAC...CCACCAGGCCTGGCAGAGTCCTCTGACCAGCACTCGGGAAATTGTTCCACGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GACCCACCAGCCCCGTACAGACGCCAATGGCGAACACCACCATCCACTTCACCGTTTGCACGGGGAAGCTaGATCACCAGTGACCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DPPAPYRRQWRTPPSTSPFARGS*ITSDPE Trigger: TTCTGGGTCACTGGTGATCCAGCTTCCCCGTGCAAA...CGGTGAAGTGGATGGTGGTGTTCGCCATTGGCGTCTGTACGGGGCTGGTGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
||
| CDS-3UTR TCA 90 bp | GCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTACATTCAGGTAGCACTTaGTCTCGGGGATTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASEQTGEWEPSCRLWGPVHSGST*SRGFQN Trigger: GTTCTGGAATCCCCGAGATCAAGTGCTACCTGAATG...TACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGCTGGTCAGAGGACTCTGCCAGGCCTGGTGGCCACACTACTAGAAGCCAAGCCCTCCAGACACACTaGACAGCACCCCAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: ECWSEDSARPGGHTTRSQALQTH*TAPQRL Trigger: AAGTCTTTGGGGTGCTGTTCAGTGTGTCTGGAGGGC...TTGGCTTCTAGTAGTGTGGCCACCAGGCCTGGCAGAGTCCTCTGACCAGCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGGACTCCAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGTCTTGTTCAGACAGTTaGATGTGGCTCCCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGLQASEQTGEWEPSCRSCSDS*MWLPGG Trigger: GCCTCCTGGGAGCCACATTCAACTGTCTGAACAAGA...CCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTGGAGTCCTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGGACTCCAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGGACCTGGAGCTGGAATaGGCCATTACCGGTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LPGLQASEQTGEWEPSCRDLELE*AITGLT Trigger: AGTCAAACCGGTAATGGCTCATTCCAGCTCCAGGTC...CCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTGGAGTCCTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCACCTGCAGAGATTCATATATGGGGTaGCATCCACAATCATTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WEPSCRLWGPVSERATCRDSYMG*HPQSFG Trigger: CCCGAATGATTGTGGATGTCACCCCATATATGAATC...TCTGCAGGTGGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | CATGGCCGTGGAACAATTTCCCGAGTGCTGGTCAGAGGACTCTGCCAGGCCTGGAGCTTAGGTTTCGGGTaGACGTTGCGCATACGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HGRGTISRVLVRGLCQAWSLGFG*TLRIRY Trigger: GTACCGTATGCGCAACGTGCACCCGAAACCTAAGCT...CCAGGCCTGGCAGAGTCCTCTGACCAGCACTCGGGAAATTGTTCCACGGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGTCAGCCAAAAGTCCAGCATaGGAGCAGGAAATAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PAEAPLGEWAGFSRVQLSAKSPA*EQEIED Trigger: ATCCTCTATTTCCTGCTCGCATGCTGGACTTTTGGC...TGACAGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR GCA 90 bp | CCGGGAGGGTCTGGGCAAGAGCTGGGCTCTCCAAGAAACAGCAACAGAGAGGTATCACCAGAGACTGGATaGGAGTGTGCGGGTAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: PGGSGQELGSPRNSNREVSPETG*ECAGRR Trigger: ACGTCTACCCGCACACTCGCATCCAGTCTCTGGTGA...TACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACCCTCCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | CCGGGAGGGTCTGGGCAAGAGCTGGGCTCTCCAAGAAACAGCAACAGAGAGGTACTCCTCTCCAGCATCTaGTGTAGCAGGTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGGSGQELGSPRNSNREVLLSSI*CSRSSF Trigger: GAAGGAGGACCTGCTACAGCAGATGCTGGAGAGGAG...TACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACCCTCCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | AGACCCACCAGCCCCGTACAGACGCCAATGGCGAACACCACCATCCACTTCACCCAAGTTTTCCCAGCTTaGTTTGCACGGGGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPTSPVQTPMANTTIHFTQVFPA*FARGSW Trigger: CCAGCTTCCCCGTGCAAAGCAAGCTGGGAAAACTTG...GGTGAAGTGGATGGTGGTGTTCGCCATTGGCGTCTGTACGGGGCTGGTGGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
||
| CDS-3UTR CCA 90 bp | GCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAACTCCGAACTTCAGTTaGGTGAAGAGTCGCACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASEQTGEWEPSCRLWGPVTPNFS*VKSRTE Trigger: TTCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGT...TACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGTCATACCGGTTTGACTCGTaGAAGACATCTGTCGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: PAEAPLGEWAGFSRVQLSYRFDS*KTSVGI Trigger: AATGCCGACAGATGTCTTCCACGAGTCAAACCGGTA...TGACAGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CCA 90 bp | GAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGGATGTGACCTGGAGCTaGAATGAGCCATTACCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EQTGEWEPSCRLWGPVSEDVTWS*NEPLPV Trigger: AACCGGTAATGGCTCATTCCAGCTCCAGGTCACATC...CTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GGCCGTGGAACAATTTCCCGAGTGCTGGTCAGAGGACTCTGCCAGGCCTGGTGGGATGTGACCTGGAGCTaGAATGAGCCATTACCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRGTISRVLVRGLCQAWWDVTWS*NEPLPV Trigger: AACCGGTAATGGCTCATTCCAGCTCCAGGTCACATC...CCACCAGGCCTGGCAGAGTCCTCTGACCAGCACTCGGGAAATTGTTCCACGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | TACCCAACTCCCACAGCAGTACCGGAGCCACACAAATGCCCAGGCGCAGAAGCCGGTCAGGGTATAGGTTaGGGTAGGGAGTGTATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YPTPTAVPEPHKCPGAEAGQGIG*GRECIS Trigger: GGAGATACACTCCCTACCCCAACCTATACCCTGACC...GGCTTCTGCGCCTGGGCATTTGTGTGGCTCCGGTACTGCTGTGGGAGTTGGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CAA 72 bp | GCGACCACAACAGGGGCCATTGGCTTTCTCCTAAGGTaGGACCTTTGGTCGGTCCTGGCTCAGGACAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATTTGAIGFLLR*DLWSVLAQDSL Trigger: CAAGCTGTCCTGAGCCAGGACCGACCAAAGGTCCAACCTTAGGAGAAAGCCAATGGCCCCTGTTGTGGTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCGGGTATCGCGGGTAGTCCTCAGCCATCTCAGCGTAAGAAAGACGTGGTTAGAGCACTTTCCACGTaGGCCCCTGGTTCCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPGIAGSPQPSQRKKDVVRALST*APGSRR Trigger: CCTTCTGGAACCAGGGGCTCACGTGGAAAGTGCTCT...AACCACGTCTTTCTTACGCTGAGATGGCTGAGGACTACCCGCGATACCCGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR TCA 90 bp | CCGGGAGGGTCTGGGCAAGAGCTGGGCTCTCCAAGAAACAGCAACAGAGAGGTAGACCTGGAGCTGGAATaGGCCATTACCGGTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PGGSGQELGSPRNSNREVDLELE*AITGLT Trigger: AGTCAAACCGGTAATGGCTCATTCCAGCTCCAGGTC...TACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACCCTCCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | GTAAGTGAGCGGGCCACCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCATAAATGCCCTTGTTaGACAAGTCTCCAGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VSERATCRGTSGRVGWLQHKCPC*TSLQST Trigger: AGTGGACTGGAGACTTGTTCAACAAGGGCATTTATG...CTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGCCCGCTCACTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCACATAAATGCCCTTGTTaGACAAGTCTCCAGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QASEQTGEWEPSCRLWGPHKCPC*TSLQST Trigger: AGTGGACTGGAGACTTGTTCAACAAGGGCATTTATG...TGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | TACTGCATTCACCACAGGCAAGTGGCGCAGGCCCATGGTTCTGAACAGGTTGAAGCACCCCAAAGACTTTaGAGAGCAGGGTCCGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YCIHHRQVAQAHGSEQVEAPQRL*RAGSGA Trigger: GGCTCCGGACCCTGCTCTGCAAAGTCTTTGGGGTGC...TTCAACCTGTTCAGAACCATGGGCCTGCGCCACTTGCCTGTGGTGAATGCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR GCA 90 bp | GAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGGCGCATACGGTACTTTaGAAGCCTCTTGTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: EQTGEWEPSCRLWGPVSEAHTVL*KPLVQT Trigger: TGTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGC...CTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGGTCTGGGCAAGAGCTGGGCTCTCCAAGAAACAGCAACAGAGAGGTACCACTCCTCTCCAGCATCTaGTGTAGCAGGTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGSGQELGSPRNSNREVPLLSSI*CSRSSF Trigger: GAAGGAGGACCTGCTACAGCAGATGCTGGAGAGGAG...TGGTACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGGTTGGACCTTTGGTCGGTCCTGGCTCAGGACAGCTTGCTTGCCAGCTTGTTCCACGTGAGCCCCTaGTTCCAGAAGGATGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LRLDLWSVLAQDSLLASLFHVSP*FQKDEP Trigger: GGGTTCATCCTTCTGGAACCAGGGGCTCACGTGGAA...CAAGCTGGCAAGCAAGCTGTCCTGAGCCAGGACCGACCAAAGGTCCAACCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CAA 72 bp | AACAGGGGCCATTGGCTTTCTCCTAAGGTTGGACCTTaGGTCGGTCCTGGCTCAGGACAGCTTGCTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NRGHWLSPKVGP*VGPGSGQLACQ Trigger: CTGGCAAGCAAGCTGTCCTGAGCCAGGACCGACCAAAGGTCCAACCTTAGGAGAAAGCCAATGGCCCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CAA 72 bp | GCCAGGAAGGCTGGGCTGGCCTCTCCGGAAGCTTTCTaGTCACCAAGGTCTGCATCAAACTGTCACATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARKAGLASPEAF*SPRSASNCHMA Trigger: AGCCATGTGACAGTTTGATGCAGACCTTGGTGACAAGAAAGCTTCCGGAGAGGCCAGCCCAGCCTTCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | ACAATCATTCGGGGATTCAGCAGTGTGAGGTCCAGGTCATGTATGTCCGGGTATCCAGGAGGCCCCCAATaGCCCCCATCACGACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TIIRGFSSVRSRSCMSGYPGGPQ*PPSRRR Trigger: TCTTCGTCGTGATGGGGGTCATTGGGGGCCTCCTGG...ATACCCGGACATACATGACCTGGACCTCACACTGCTGAATCCCCGAATGATTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR TCA 90 bp | GTATCGCGGGTAGTCCTCAGCCATCTCAGCGTAAGAAAGACGTGGTTGGCTGGCCAGACTCCTGGGAGTTaGAGAAGAGTGTGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VSRVVLSHLSVRKTWLAGQTPGS*RRVWPC Trigger: ACATGGCCACACTCTTCTTCAACTCCCAGGAGTCTG...GCCAGCCAACCACGTCTTTCTTACGCTGAGATGGCTGAGGACTACCCGCGATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR TCA 90 bp | GAGGGTCTGGGCAAGAGCTGGGCTCTCCAAGAAACAGCAACAGAGAGGTACCAATCAGGTTGGGCTCCATaGTGTCACTGGCTCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGLGKSWALQETATERYQSGWAP*CHWLSA Trigger: AGCTGAGAGCCAGTGACATCATGGAGCCCAACCTGA...TTGGTACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCCTCAGTCCAACACCTTCCCGGGAGGGTCTGGGCAAGAGCTGGGCTCTCCGGAGACGGTAAATGGTaGAGGATTCATATATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FASVQHLPGRVWARAGLSGDGKW*RIHIWG Trigger: ACCCCATATATGAATCCTTCACCATTTACCGTCTCC...GGAGAGCCCAGCTCTTGCCCAGACCCTCCCGGGAAGGTGTTGGACTGAGGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GCAACTGTCAGAGGGTCTGGTAATGCTGCCGCAGCCGGGCCTGCAGGAATTCATGTTTCGGGTGCACGTTaGGCATACGGTACTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ATVRGSGNAAAAGPAGIHVSGAR*AYGTLQ Trigger: TTGCAAAGTACCGTATGCGCAACGTGCACCCGAAAC...ATGAATTCCTGCAGGCCCGGCTGCGGCAGCATTACCAGACCCTCTGACAGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CCA 90 bp | CACCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGTCTTTCTTATTATCCATaGTCTCCAACACCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLQRHLWESGLASAGCNCLSYYP*SPTPPG Trigger: ACCTGGAGGTGTTGGAGACCATGGATAATAAGAAAG...ACAGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGGACTCCAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGTACCGGTTTGACTCGTaGAAGACATCTGTCGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LPGLQASEQTGEWEPSCRYRFDS*KTSVGI Trigger: AATGCCGACAGATGTCTTCCACGAGTCAAACCGGTA...CCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTGGAGTCCTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | CATGGCCGTGGAACAATTTCCCGAGTGCTGGTCAGAGGACTCTGCCAGGCCTGGTACCGGTTTGACTCGTaGAAGACATCTGTCGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: HGRGTISRVLVRGLCQAWYRFDS*KTSVGI Trigger: AATGCCGACAGATGTCTTCCACGAGTCAAACCGGTA...CCAGGCCTGGCAGAGTCCTCTGACCAGCACTCGGGAAATTGTTCCACGGCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GCAACTGTCAGAGGGTCTGGTAATGCTGCCGCAGCCGGGCCTGCAGGAATTCATGATGTGACCTGGAGCTaGAATGAGCCATTACCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ATVRGSGNAAAAGPAGIHDVTWS*NEPLPV Trigger: AACCGGTAATGGCTCATTCCAGCTCCAGGTCACATC...ATGAATTCCTGCAGGCCCGGCTGCGGCAGCATTACCAGACCCTCTGACAGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CCA 90 bp | GGGTCAGAGCATGAACCCGCTCCTAGGAAACAGAAGGAGAAGAAAGTTGGGCCAGTTCTCCGTGACCACTaGGAAGGCATGGTGGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GSEHEPAPRKQKEKKVGPVLRDH*EGMVDR Trigger: ACGGTCCACCATGCCTTCCCAGTGGTCACGGAGAAC...TGGCCCAACTTTCTTCTCCTTCTGTTTCCTAGGAGCGGGTTCATGCTCTGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGTCTGGGCAAGAGCTGGGCTCTCCAAGAAACAGCAACAGAGAGGTACCAGGTCAGGGTATAGGTTaGGGTAGGGAGTGTATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGSGQELGSPRNSNREVPGQGIG*GRECIS Trigger: GGAGATACACTCCCTACCCCAACCTATACCCTGACC...TGGTACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR CAA 72 bp | TGCCGCAGCCGGGCCTGCAGGAATTCATTTGTCAGGTaGTGCCGTGTAATGATCCCCACGATCTCTCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: CRSRACRNSFVR*CRVMIPTISPT Trigger: AGTAGGAGAGATCGTGGGGATCATTACACGGCACAACCTGACAAATGAATTCCTGCAGGCCCGGCTGCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR TCA 90 bp | GGCAGCGGCCAAACACAACCATGCTTAGCTATTTTCCCAACTACTTGGGAAGAGGCAAGGCAGCCCTTCTaGCTGCATTCCTCCACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGQTQPCLAIFPTTWEEARQPF*LHSSTA Trigger: AGCGGTGGAGGAATGCAGTCAGAAGGGCTGCCTTGC...CTCTTCCCAAGTAGTTGGGAAAATAGCTAAGCATGGTTGTGTTTGGCCGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAACAGCAACAGAGAGGTACCAAGTGTCCACCTAGGATCCAGCCCGACGGCAGCTTAGGTTTCGGGTaGACGTTGCGCATACGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KKQQQRGTKCPPRIQPDGSLGFG*TLRIRY Trigger: GTACCGTATGCGCAACGTGCACCCGAAACCTAAGCT...GCCGTCGGGCTGGATCCTAGGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | CTGACTTTCCGAATAGCACACTCCTCGGACAAGCAGGGTGACAAGCTGAGAGCGAGCTTAGGTTTCGGGTaGACGTTGCGCATACGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LTFRIAHSSDKQGDKLRASLGFG*TLRIRY Trigger: GTACCGTATGCGCAACGTGCACCCGAAACCTAAGCT...CGCTCTCAGCTTGTCACCCTGCTTGTCCGAGGAGTGTGCTATTCGGAAAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR GCA 90 bp | CTGGGCTCTCCAAGAAACAGCAACAGAGAGGTACCAAGTGTCCACCTAGGATCCTCACCAGAGACTGGATaGGAGTGTGCGGGTAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSPRNSNREVPSVHLGSSPETG*ECAGRR Trigger: ACGTCTACCCGCACACTCGCATCCAGTCTCTGGTGA...GGATCCTAGGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | TACTGCATTCACCACAGGCAAGTGGCGCAGGCCCATGGTTCTGAACAGGTTGAACCGTACAGACGCCAATaGCGAACACCACCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: YCIHHRQVAQAHGSEQVEPYRRQ*RTPPST Trigger: AGTGGATGGTGGTGTTCGCCATTGGCGTCTGTACGG...TTCAACCTGTTCAGAACCATGGGCCTGCGCCACTTGCCTGTGGTGAATGCAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CCA 90 bp | CTGACTTTCCGAATAGCACACTCCTCGGACAAGCAGGGTGACAAGCTGAGAGCGACCACAGCACCACTGTaGATCATGGGGCCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTFRIAHSSDKQGDKLRATTAPL*IMGPSF Trigger: GAAAGAAGGCCCCATGATCCACAGTGGTGCTGTGGT...CGCTCTCAGCTTGTCACCCTGCTTGTCCGAGGAGTGTGCTATTCGGAAAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGTCTGGGCAAGAGCTGGGCTCTCCAAGAAACAGCAACAGAGAGGTACCAAAGCAATCCAGGCAGCTaGAAGGAACCCCAACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGLGKSWALQETATERYQSNPGS*KEPQLP Trigger: TGGAAGTTGGGGTTCCTTCCAGCTGCCTGGATTGCT...TTGGTACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGTCAGAGGGTCTGGTAATGCTTTGTTGCTTATGAGCTaGTTGCCCTTCATGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRVGWLQPGATVRGSGNALLLMS*LPFMNS Trigger: GGAGTTCATGAAGGGCAACCAGCTCATAAGCAACAA...AGCATTACCAGACCCTCTGACAGTTGCACCCGGCTGAAGCCAGCCCACTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CCA 90 bp | GGGTCAGAGCATGAACCCGCTCCTAGGAAACAGAAGGAGAAGAAAGTTGGGCCATCTTCACTCGGGGACTaGTCAGGGTATAGGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSEHEPAPRKQKEKKVGPSSLGD*SGYRLG Trigger: CCCCAACCTATACCCTGACCAGTCCCCGAGTGAAGA...TGGCCCAACTTTCTTCTCCTTCTGTTTCCTAGGAGCGGGTTCATGCTCTGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR CAA 72 bp | GTGGCGCAGGCCCATGGTTCTGAACAGGTTGAACACTaGAGAAACATGGGTGTTGGGGGAGACGGTAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VAQAHGSEQVEH*RNMGVGGDGKW Trigger: CCATTTACCGTCTCCCCCAACACCCATGTTTCTCAAGTGTTCAACCTGTTCAGAACCATGGGCCTGCGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCAAACATGGGGAACAGTTCTTAGTGCCCAATTCTTGAACCTAGTAATGCCAGGAGGCCCCCAATaGCCCCCATCACGACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPQTWGTVLSAQFLNLVMPGGPQ*PPSRRR Trigger: TCTTCGTCGTGATGGGGGTCATTGGGGGCCTCCTGG...CATTACTAGGTTCAAGAATTGGGCACTAAGAACTGTTCCCCATGTTTGGGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | TACTGCATTCACCACAGGCAAGTGGCGCAGGCCCATGGTTCTGAACAGGTTGAAGACCTGGAGCTGGAATaGGCCATTACCGGTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: YCIHHRQVAQAHGSEQVEDLELE*AITGLT Trigger: AGTCAAACCGGTAATGGCTCATTCCAGCTCCAGGTC...TTCAACCTGTTCAGAACCATGGGCCTGCGCCACTTGCCTGTGGTGAATGCAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCAAACATGGGGAACAGTTCTTAGTGCCCAATTCTTGAACCTAGTAATGTGCCCCGGTTCTCCGTaGCCACTGGGAAGGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPQTWGTVLSAQFLNLVMCPGSP*PLGRHG Trigger: ACCATGCCTTCCCAGTGGTCACGGAGAACCGGGGCA...CATTACTAGGTTCAAGAATTGGGCACTAAGAACTGTTCCCCATGTTTGGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCAGAGCATGAACCCGCTCCTAGGAAACAGAAGGAGAAGAAAGTTGGGCCATCTTCCGTAAGGAGATaGTCTGGAACTGAGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSEHEPAPRKQKEKKVGPSSVRR*SGTEGG Trigger: GCCTCCCTCAGTTCCAGAGCATCTCCTTACGGAAGA...TGGCCCAACTTTCTTCTCCTTCTGTTTCCTAGGAGCGGGTTCATGCTCTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGTCATGTATGTCCGGGTATCGCGGGTAGTCCTCAGCCATCTCAGCGTAAGGCGCATACGGTACTTTaGAAGCCTCTTGTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGHVCPGIAGSPQPSQRKAHTVL*KPLVQT Trigger: TGTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGC...CTTACGCTGAGATGGCTGAGGACTACCCGCGATACCCGGACATACATGACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR GCA 90 bp | GGTCAGAGCATGAACCCGCTCCTAGGAAACAGAAGGAGAAGAAAGTTGGGCCAACCCACCCAAGAAAGCTaGCGCACCAATCAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQSMNPLLGNRRRRKLGQPTQES*RTNQGK Trigger: TTTGCCCTGATTGGTGCGGCAGCTTTCTTGGGTGGG...TTGGCCCAACTTTCTTCTCCTTCTGTTTCCTAGGAGCGGGTTCATGCTCTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGAATGAGTCTAAAGACATTCAAGCCACGGGGTCAGAGCATGAACCCGCTCCCCACCCAAGAAAGCTaGCGCACCAATCAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGMSLKTFKPRGQSMNPLPTQES*RTNQGK Trigger: TTTGCCCTGATTGGTGCGGCAGCTTTCTTGGGTGGG...GAGCGGGTTCATGCTCTGACCCCGTGGCTTGAATGTCTTTAGACTCATTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | TCATTTGTCAGGTTGTGCCGTGTAATGATCCCCACGATCTCTCCTACTGCATTCGGCAGCCCTTCTGACTaGATTCCTCCACCGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFVRLCRVMIPTISPTAFGSPSD*IPPPLQ Trigger: CTGCAGCGGTGGAGGAATGCAGTCAGAAGGGCTGCC...GAATGCAGTAGGAGAGATCGTGGGGATCATTACACGGCACAACCTGACAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGCTCTCCAAGAAACAGCAACAGAGAGGTACCAAGTGTCCACCTAGGATCCAGCAATCCAGGCAGCTaGAAGGAACCCCAACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSPRNSNREVPSVHLGSSNPGS*KEPQLP Trigger: TGGAAGTTGGGGTTCCTTCCAGCTGCCTGGATTGCT...GGATCCTAGGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAACAGCAACAGAGAGGTACCAAGTGTCCACCTAGGATCCAGCCCGACGGCAGGATGGCAGACTCCTaGGAGTTGAAGAAGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KKQQQRGTKCPPRIQPDGRMADS*ELKKSV Trigger: CACACTCTTCTTCAACTCCCAGGAGTCTGCCATCCT...GCCGTCGGGCTGGATCCTAGGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGGATCTGGTCAGGAATGAGTCTAAAGACATTCAAGCCACGGGGTCAGAGCGTTCTCCGTGACCACTaGGAAGGCATGGTGGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: SRIWSGMSLKTFKPRGQSVLRDH*EGMVDR Trigger: ACGGTCCACCATGCCTTCCCAGTGGTCACGGAGAAC...GCTCTGACCCCGTGGCTTGAATGTCTTTAGACTCATTCCTGACCAGATCCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| 3UTR CAA 72 bp | TGGACCTTTGGTCGGTCCTGGCTCAGGACAGCTTGCTaGCCAGCTTGTAGAGTGATCTCAAATTCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WTFGRSWLRTAC*PACRVISNSPG Trigger: TCCTGGTGAATTTGAGATCACTCTACAAGCTGGCAAGCAAGCTGTCCTGAGCCAGGACCGACCAAAGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGCTACAATTCTGCAAACCCACCAGGCTGGGAAGACAGTTCTGTGGTGTGTTCTTGTTCAGACAGTTaGATGTGGCTCCCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGYNSANPPGWEDSSVVCSCSDS*MWLPGG Trigger: GCCTCCTGGGAGCCACATTCAACTGTCTGAACAAGA...ACACACCACAGAACTGTCTTCCCAGCCTGGTGGGTTTGCAGAATTGTAGCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGCTACAATTCTGCAAACCCACCAGGCTGGGAAGACAGTTCTGTGGTGTGTCAGACTCCTGGGAGTTaGAGAAGAGTGTGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TGYNSANPPGWEDSSVVCQTPGS*RRVWPC Trigger: ACATGGCCACACTCTTCTTCAACTCCCAGGAGTCTG...ACACACCACAGAACTGTCTTCCCAGCCTGGTGGGTTTGCAGAATTGTAGCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAACAGCAACAGAGAGGTACCAAGTGTCCACCTAGGATCCAGCCCGACGGCGCGCATACGGTACTTTaGAAGCCTCTTGTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KKQQQRGTKCPPRIQPDGAHTVL*KPLVQT Trigger: TGTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGC...GCCGTCGGGCTGGATCCTAGGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GGTCAGAGCATGAACCCGCTCCTAGGAAACAGAAGGAGAAGAAAGTTGGGCCAACACTGGGGACAGATGTaGCAAAAGTCCAGCATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GQSMNPLLGNRRRRKLGQHWGQM*QKSSMR Trigger: TCGCATGCTGGACTTTTGGCACATCTGTCCCCAGTG...TTGGCCCAACTTTCTTCTCCTTCTGTTTCCTAGGAGCGGGTTCATGCTCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | TATCCAAAGAACAGCTGCCACAAGGGCCTTGGGTTGCAGGAAGATGAATGCAAAGCTCATCACACACGTTaGGCAGCTCGCTGGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YPKNSCHKGLGLQEDECKAHHTR*AARWKG Trigger: ACCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGC...TTTGCATTCATCTTCCTGCAACCCAAGGCCCTTGTGGCAGCTGTTCTTTGGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
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| CDS-3UTR CCA 90 bp | TCAGGAATGAGTCTAAAGACATTCAAGCCACGGGGTCAGAGCATGAACCCGCTCCACCACTGTGGATCATaGGGCCTTCTTTCCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SGMSLKTFKPRGQSMNPLHHCGS*GLLSPQ Trigger: TTGTGGGGAAAGAAGGCCCCATGATCCACAGTGGTG...GAGCGGGTTCATGCTCTGACCCCGTGGCTTGAATGTCTTTAGACTCATTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GGTCAGAGCATGAACCCGCTCCTAGGAAACAGAAGGAGAAGAAAGTTGGGCCAAACCACAGCACCACTGTaGATCATGGGGCCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQSMNPLLGNRRRRKLGQTTAPL*IMGPSF Trigger: GAAAGAAGGCCCCATGATCCACAGTGGTGCTGTGGT...TTGGCCCAACTTTCTTCTCCTTCTGTTTCCTAGGAGCGGGTTCATGCTCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | CTGACTTTCCGAATAGCACACTCCTCGGACAAGCAGGGTGACAAGCTGAGAGCGATTCTCCTAACACCATaGAGGCCACAAACACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTFRIAHSSDKQGDKLRAILLTP*RPQTPP Trigger: TGGTGGTGTTTGTGGCCTCCATGGTGTTAGGAGAAT...CGCTCTCAGCTTGTCACCCTGCTTGTCCGAGGAGTGTGCTATTCGGAAAGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGTCATGTATGTCCGGGTATCGCGGGTAGTCCTCAGCCATCTCAGCGTAAGTCTTCTGATGTGACCTaGAGCTGGAATGAGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: PGHVCPGIAGSPQPSQRKSSDVT*SWNEPL Trigger: TAATGGCTCATTCCAGCTCCAGGTCACATCAGAAGA...CTTACGCTGAGATGGCTGAGGACTACCCGCGATACCCGGACATACATGACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR TCA 90 bp | TCAAGGATCTGGTCAGGAATGAGTCTAAAGACATTCAAGCCACGGGGTCAGAGCCCAGGTAAGGGTCATTaGTGCAGCGGTCATAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRIWSGMSLKTFKPRGQSPGKGH*CSGHSP Trigger: TGGACTATGACCGCTGCATCAATGACCCTTACCTGG...GCTCTGACCCCGTGGCTTGAATGTCTTTAGACTCATTCCTGACCAGATCCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGGGAGAAGCTGTCCCCCTGTGGTGGGATTTAATGCTTCAAAGGCTGTTCCAGGTAAGGGTCATTaGTGCAGCGGTCATAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEGRSCPPVVGFNASKAVPGKGH*CSGHSP Trigger: TGGACTATGACCGCTGCATCAATGACCCTTACCTGG...AACAGCCTTTGAAGCATTAAATCCCACCACAGGGGGACAGCTTCTCCCTTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCAAACATGGGGAACAGTTCTTAGTGCCCAATTCTTGAACCTAGTAATGAGAGCACTTTCCACGTaGGCCCCTGGTTCCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPQTWGTVLSAQFLNLVMRALST*APGSRR Trigger: CCTTCTGGAACCAGGGGCTCACGTGGAAAGTGCTCT...CATTACTAGGTTCAAGAATTGGGCACTAAGAACTGTTCCCCATGTTTGGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | TGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTTCAGCTCCTCGGGGGTaGGGCTCTCCCGTTCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: WDLMLQRLLAGILVHQGSSAPRG*GSPVHR Trigger: GCGGTGAACGGGAGAGCCGCACCCCCGAGGAGCTGA...AGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCAAACATGGGGAACAGTTCTTAGTGCCCAATTCTTGAACCTAGTAATGTGCCGCAGCCGGGCCTaGAGGAATTCATTTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPQTWGTVLSAQFLNLVMCRSRA*RNSFVR Trigger: CCTGACAAATGAATTCCTGCAGGCCCGGCTGCGGCA...CATTACTAGGTTCAAGAATTGGGCACTAAGAACTGTTCCCCATGTTTGGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | CACCAGCCCCGTACAGACGCCAATGGCGAACACCACCATCCACTTCACCGCCTCTCATTCTACAATGCTTaGTTCGTTCAAAACTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HQPRTDANGEHHHPLHRLSFYNA*FVQNSK Trigger: CTTTGAGTTTTGAACGAAGCAAGCATTGTAGAATGA...GAGGCGGTGAAGTGGATGGTGGTGTTCGCCATTGGCGTCTGTACGGGGCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
||
| CDS-3UTR CCA 90 bp | CCGGGAGGGTCTGGGCAAGAGCTGGGCTCTCCAAGAAACAGCAACAGAGAGGTACTCATAGTCTTTCCTTaGAAGAATCTCATCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGGSGQELGSPRNSNREVLIVFP*KNLILF Trigger: GAAGAGGATGAGATTCTTCCAAGGAAAGACTATGAG...TACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACCCTCCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGGTCATGTATGTCCGGGTATCGCGGGTAGTCCTCAGCCATCTCAGCGTCTCATAGTCTTTCCTTaGAAGAATCTCATCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPGHVCPGIAGSPQPSQRLIVFP*KNLILF Trigger: GAAGAGGATGAGATTCTTCCAAGGAAAGACTATGAG...ACGCTGAGATGGCTGAGGACTACCCGCGATACCCGGACATACATGACCTGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGAAACAGCAACAGAGAGGTACCAAGTGTCCACCTAGGATCCAGCCCGACGTTGTTGCTTATGAGCTaGTTGCCCTTCATGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRNSNREVPSVHLGSSPTLLLMS*LPFMNS Trigger: GGAGTTCATGAAGGGCAACCAGCTCATAAGCAACAA...CGTCGGGCTGGATCCTAGGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCCCAGCTGGAACTGCTTAACAAGGTCACATGCAGACATCTCATAAAATACTTCACCACAGGCAAGTaGCGCAGGCCCATGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSQLELLNKVTCRHLIKYFTTGK*RRPMVL Trigger: CAGAACCATGGGCCTGCGCCACTTGCCTGTGGTGAA...GTATTTTATGAGATGTCTGCATGTGACCTTGTTAAGCAGTTCCAGCTGGGACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | GGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTGCCCCGGTTCTCCGTaGCCACTGGGAAGGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFNASKAVSWNFSASRIWCPGSP*PLGRHG Trigger: ACCATGCCTTCCCAGTGGTCACGGAGAACCGGGGCA...CCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GGTCAGAGCATGAACCCGCTCCTAGGAAACAGAAGGAGAAGAAAGTTGGGCCAAGCCAAAAGTCCAGCATaGGAGCAGGAAATAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQSMNPLLGNRRRRKLGQAKSPA*EQEIED Trigger: ATCCTCTATTTCCTGCTCGCATGCTGGACTTTTGGC...TTGGCCCAACTTTCTTCTCCTTCTGTTTCCTAGGAGCGGGTTCATGCTCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GGTCAGAGCATGAACCCGCTCCTAGGAAACAGAAGGAGAAGAAAGTTGGGCCAATCATTTGTCAGGTTGTaGCGTGTAATGATCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: GQSMNPLLGNRRRRKLGQSFVRL*RVMIPT Trigger: CGTGGGGATCATTACACGGCACAACCTGACAAATGA...TTGGCCCAACTTTCTTCTCCTTCTGTTTCCTAGGAGCGGGTTCATGCTCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCACATGTATCCAAAGAACAGCTGCCACAAGGGCCTTGGGTTGCAGGAAGAATTCTCCTAACACCATaGAGGCCACAAACACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: MPHVSKEQLPQGPWVAGRILLTP*RPQTPP Trigger: TGGTGGTGTTTGTGGCCTCCATGGTGTTAGGAGAAT...TCTTCCTGCAACCCAAGGCCCTTGTGGCAGCTGTTCTTTGGATACATGTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGCTCTCCAAGAAACAGCAACAGAGAGGTACCAAGTGTCCACCTAGGATCCTCTTCTGATGTGACCTaGAGCTGGAATGAGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LGSPRNSNREVPSVHLGSSSDVT*SWNEPL Trigger: TAATGGCTCATTCCAGCTCCAGGTCACATCAGAAGA...GGATCCTAGGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| 3UTR CAA 72 bp | TGCAGGAAGATGAATGCAAATGTCCCTACTCAGATGTaGGTTCCGAGAGGACCAGCAGCCAGGAGAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CRKMNANVPTQM*VPRGPAARRER Trigger: TCTTTCTCTCCTGGCTGCTGGTCCTCTCGGAACCAACATCTGAGTAGGGACATTTGCATTCATCTTCCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CAA 72 bp | GCCACATGTATCCAAAGAACAGCTGCCACAAGGGCCTaGGGTTGCAGGAAGATGAATGCAAATGTCCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: ATCIQRTAATRA*GCRKMNANVPT Trigger: AGTAGGGACATTTGCATTCATCTTCCTGCAACCCAAGGCCCTTGTGGCAGCTGTTCTTTGGATACATGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCGCAAGGCAGCCCTTCTaGCTGCATTCCTCCACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGFNASKAVSWNFSASRIARQPF*LHSSTD Trigger: GTCGGTGGAGGAATGCAGTCAGAAGGGCTGCCTTGC...GATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030879.12 |
||
| CDS-3UTR TCA 90 bp | CACCTCCAGGTAAGGGTCATTGATGCAGCGGTCATAGTCCAGACTCTCATAGTCGTGACCCAGAAAGAGTaGAGGGTAGAGAATAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLQVRVIDAAVIVQTLIVVTQKE*RVENKN Trigger: GTTCTTATTCTCTACCCTTCACTCTTTCTGGGTCAC...GACTATGAGAGTCTGGACTATGACCGCTGCATCAATGACCCTTACCTGGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGGGAGAAGCTGTCCCCCTGTGGTGGGATTTAATGCTTCAAAGGCTGTTTCATTTGTCAGGTTGTaGCGTGTAATGATCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TEGRSCPPVVGFNASKAVSFVRL*RVMIPT Trigger: CGTGGGGATCATTACACGGCACAACCTGACAAATGA...AACAGCCTTTGAAGCATTAAATCCCACCACAGGGGGACAGCTTCTCCCTTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTCAGGAATACGACTTCATGGACTaGCCCCGCTTGCGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MLQRLLAGILVHQGSGQEYDFMD*PRLRCS Trigger: TGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTA...TTCCTGACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GTAAATGGTGAAGGATTCATATATGGGGTGACATCCACAATCATTCGGGGATTCTACGACTTCATGGACTaGCCCCGCTTGCGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VNGEGFIYGVTSTIIRGFYDFMD*PRLRCS Trigger: TGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTA...GAATCCCCGAATGATTGTGGATGTCACCCCATATATGAATCCTTCACCATTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR GCA 90 bp | TGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGCACCCCAAAGACTTTaGAGAGCAGGGTCCGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WDLMLQRLLAGILVHQGSAPQRL*RAGSGA Trigger: GGCTCCGGACCCTGCTCTGCAAAGTCTTTGGGGTGC...AGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | CAAACATGGGGAACAGTTCTTAGTGCCCAATTCTTGAACCTAGTAATGAACATGTGCCGCAGCCGGGCCTaGAGGAATTCATTTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTWGTVLSAQFLNLVMNMCRSRA*RNSFVR Trigger: CCTGACAAATGAATTCCTGCAGGCCCGGCTGCGGCA...CATGTTCATTACTAGGTTCAAGAATTGGGCACTAAGAACTGTTCCCCATGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GGTCAGAGCATGAACCCGCTCCTAGGAAACAGAAGGAGAAGAAAGTTGGGCCAACTTTCTTATTATCCATaGTCTCCAACACCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQSMNPLLGNRRRRKLGQLSYYP*SPTPPG Trigger: ACCTGGAGGTGTTGGAGACCATGGATAATAAGAAAG...TTGGCCCAACTTTCTTCTCCTTCTGTTTCCTAGGAGCGGGTTCATGCTCTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCGGAAACGCTCCTCCATaGTCCAGTCTTCACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGFNASKAVSWNFSASRIGNAPP*SSLHSG Trigger: CCCCGAGTGAAGACTGGACCATGGAGGAGCGTTTCC...GATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | TGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGCTGGTTGCCCTTCATaGACTCCTTCTCGTTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WDLMLQRLLAGILVHQGSAGCPS*TPSRCP Trigger: GGGGCAACGAGAAGGAGTTCATGAAGGGCAACCAGC...AGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | GATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTGCTGGTTGCCCTTCATaGACTCCTTCTCGTTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DLMLQRLLAGILVHQGSGAGCPS*TPSRCP Trigger: GGGGCAACGAGAAGGAGTTCATGAAGGGCAACCAGC...ACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAAAGATGTCTGATGGCAGCTTCGTTGGAGGAGAAAATTCGTGTTTCATTTAAGCTGGATCACCAGTaGCCCAGAAAGAGTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PERCLMAASLEEKIRVSFKLDHQ*PRKSEG Trigger: CCCTTCACTCTTTCTGGGTCACTGGTGATCCAGCTT...AAATGAAACACGAATTTTCTCCTCCAACGAAGCTGCCATCAGACATCTTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
||
| CDS-3UTR GCA 90 bp | TGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGCTCATCACACACGTTaGGCAGCTCGCTGGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WDLMLQRLLAGILVHQGSAHHTR*AARWKG Trigger: ACCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGC...AGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTTCCACGTGAGCCCCTaGTTCCAGAAGGATGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: VGFNASKAVSWNFSASRIFHVSP*FQKDEP Trigger: GGGTTCATCCTTCTGGAACCAGGGGCTCACGTGGAA...GATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GTAAATGGTGAAGGATTCATATATGGGGTGACATCCACAATCATTCGGGGATTCAGCAATCCAGGCAGCTaGAAGGAACCCCAACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VNGEGFIYGVTSTIIRGFSNPGS*KEPQLP Trigger: TGGAAGTTGGGGTTCCTTCCAGCTGCCTGGATTGCT...GAATCCCCGAATGATTGTGGATGTCACCCCATATATGAATCCTTCACCATTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| 3UTR CAA 72 bp | ATGTATCCAAAGAACAGCTGCCACAAGGGCCTTGGGTaGCAGGAAGATGAATGCAAATGTCCCTACTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MYPKNSCHKGLG*QEDECKCPYSD Trigger: ATCTGAGTAGGGACATTTGCATTCATCTTCCTGCAACCCAAGGCCCTTGTGGCAGCTGTTCTTTGGATACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | GGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTCTTGTTCAGACAGTTaGATGTGGCTCCCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GFNASKAVSWNFSASRIWSCSDS*MWLPGG Trigger: GCCTCCTGGGAGCCACATTCAACTGTCTGAACAAGA...CCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTCCGTACAGACGCCAATaGCGAACACCACCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DLMLQRLLAGILVHQGSGPYRRQ*RTPPST Trigger: AGTGGATGGTGGTGTTCGCCATTGGCGTCTGTACGG...ACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGTTCCTCAATTTTGGTTGACTTTGGGAATGAATCCAAGATAAAGTTGTGGACCACAGCACCACTGTaGATCATGGGGCCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGSSILVDFGNESKIKLWTTAPL*IMGPSF Trigger: GAAAGAAGGCCCCATGATCCACAGTGGTGCTGTGGT...CCACAACTTTATCTTGGATTCATTCCCAAAGTCAACCAAAATTGAGGAACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| 3UTR CAA 72 bp | CTTAGTTATAGTTCACAGGTGAAAAAGCTGTTGTCTTaGGGCTTTTCTGGAAAGGCAGGTTCAGCAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSYSSQVKKLLS*GFSGKAGSAGT Trigger: GGTCCCTGCTGAACCTGCCTTTCCAGAAAAGCCCAAAGACAACAGCTTTTTCACCTGTGAACTATAACTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTGGGGATTCCAGAACCTaGTGCCACTGGCTCTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: DLMLQRLLAGILVHQGSGGDSRT*CHWLYQ Trigger: TTGATAGAGCCAGTGGCAGCAGGTTCTGGAATCCCC...ACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCGTTTCGGGTGCACGTTaGGCATACGGTACTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGFNASKAVSWNFSASRIVSGAR*AYGTLQ Trigger: TTGCAAAGTACCGTATGCGCAACGTGCACCCGAAAC...GATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | CAAACATGGGGAACAGTTCTTAGTGCCCAATTCTTGAACCTAGTAATGAACATGACTCCGAACTTCAGTTaGGTGAAGAGTCGCACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTWGTVLSAQFLNLVMNMTPNFS*VKSRTE Trigger: TTCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGT...CATGTTCATTACTAGGTTCAAGAATTGGGCACTAAGAACTGTTCCCCATGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTCACCACTGTGGATCATaGGGCCTTCTTTCCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: DLMLQRLLAGILVHQGSGHHCGS*GLLSPQ Trigger: TTGTGGGGAAAGAAGGCCCCATGATCCACAGTGGTG...ACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTCAGGAAGGAGACGGTAAATGGTaGAGGATTCATATATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MLQRLLAGILVHQGSGQEGDGKW*RIHIWG Trigger: ACCCCATATATGAATCCTTCACCATTTACCGTCTCC...TTCCTGACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTACTCCGAACTTCAGTTaGGTGAAGAGTCGCACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLMLQRLLAGILVHQGSGTPNFS*VKSRTE Trigger: TTCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGT...ACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | AAAAAGAATCTAAAACAAATGAATGCCACATGTATCCAAAGAACAGCTGCCACATCTTCCGTAAGGAGATaGTCTGGAACTGAGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKNLKQMNATCIQRTAATSSVRR*SGTEGG Trigger: GCCTCCCTCAGTTCCAGAGCATCTCCTTACGGAAGA...TGTGGCAGCTGTTCTTTGGATACATGTGGCATTCATTTGTTTTAGATTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR GCA 90 bp | GAACCTAGTAATGAACATGATATGCAAATAACATCCTCAATGTTTGCCTCAGTCGTTTCGGGTGCACGTTaGGCATACGGTACTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EPSNEHDMQITSSMFASVVSGAR*AYGTLQ Trigger: TTGCAAAGTACCGTATGCGCAACGTGCACCCGAAAC...GACTGAGGCAAACATTGAGGATGTTATTTGCATATCATGTTCATTACTAGGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTATTCTCCTAACACCATaGAGGCCACAAACACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: DLMLQRLLAGILVHQGSGILLTP*RPQTPP Trigger: TGGTGGTGTTTGTGGCCTCCATGGTGTTAGGAGAAT...ACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | GGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTTGTTGCTTATGAGCTaGTTGCCCTTCATGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFNASKAVSWNFSASRIWLLLMS*LPFMNS Trigger: GGAGTTCATGAAGGGCAACCAGCTCATAAGCAACAA...CCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR TCA 90 bp | GAACCTAGTAATGAACATGATATGCAAATAACATCCTCAATGTTTGCCTCAGTCGATTCATATATGGGGTaGCATCCACAATCATTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPSNEHDMQITSSMFASVDSYMG*HPQSFG Trigger: CCCGAATGATTGTGGATGTCACCCCATATATGAATC...GACTGAGGCAAACATTGAGGATGTTATTTGCATATCATGTTCATTACTAGGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CCA 90 bp | TGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTCTCATAGTCTTTCCTTaGAAGAATCTCATCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WDLMLQRLLAGILVHQGSLIVFP*KNLILF Trigger: GAAGAGGATGAGATTCTTCCAAGGAAAGACTATGAG...AGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS GCA 90 bp | CCTCTTCTTCCTGTGTCTCCCCAAGGATGGTCAGCTCCTCGGGGGTaGGGCTCTCCCGTTCACCGCAGCAGCAACACCACCGGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLLPVSPQGWSAPRG*GSPVHRSSNTTGSS Trigger: GCTGCTGCCGGTGGTGTTGCTGCTGCGGTGAACGGGAGAGCCGCACCCCCGAGGAGCTGACCATCCTTGGGGAGACACAGGAAGAAGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGCGGGCCACCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGATGAACTCCTTCTCGTaGCCCCGGTTCTCCGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: VSGPPAEAPLGEWAGFSRMNSFS*PRFSVT Trigger: GGTCACGGAGAACCGGGGCAACGAGAAGGAGTTCAT...CCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGCCCGCTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGAGCGGGCCACCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGTGCTCATCACACACGTaGCGCAGCTCGCTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VSERATCRGTSGRVGWLQCSSHT*RSSLEG Trigger: CCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGCA...CTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGCCCGCTCACTTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 90 bp | GCTCATCACACACGTTGCGCAGCTCGCTGGAAGGGTACGACTTCATaGACTGGCCCCGCTTGCGCTGCTCACCAGCACGGGTCAGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: AHHTRCAARWKGTTS*TGPACAAHQHGSGY Trigger: GTATCCTGACCCGTGCTGGTGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTACCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCACCTGCAGACACTCCGAACTTCAGTaGGGTGAAGAGTCGCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: WEPSCRLWGPVSERATCRHSELQ*GEESHG Trigger: TCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGTG...TCTGCAGGTGGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | GCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGCACCCCAAAGACTTaGCAGAGCAGGGTCCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASEQTGEWEPSCRLWGPVSTPKT*QSRVRS Trigger: GCTCCGGACCCTGCTCTGCAAAGTCTTTGGGGTGCT...TACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | GGCCGTGGAACAATTTCCCGAGTGCTGGTCAGAGGACTCTGCCAGGCCTGGTGGTGCTCATCACACACGTaGCGCAGCTCGCTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGTISRVLVRGLCQAWWCSSHT*RSSLEG Trigger: CCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGCA...CCACCAGGCCTGGCAGAGTCCTCTGACCAGCACTCGGGAAATTGTTCCACGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS GCA 90 bp | CCTTCTCTGCCGGCTCCTCAGAAGCCACATGCTCATCACACACGTTaGGCAGCTCGCTGGAAGGGTACGACTTCATGGACTGGCCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSLPAPQKPHAHHTR*AARWKGTTSWTGPA Trigger: AGCGGGGCCAGTCCATGAAGTCGTACCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGCATGTGGCTTCTGAGGAGCCGGCAGAGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 90 bp | TCCTTCTCGTTGCCCCGGTTCTCCGTGACCACTGGGAAGGCATGGTaGACCGTAGTGCGCAGGATGCTCACCAGAGACTGGATGCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFSLPRFSVTTGKAW*TVVRRMLTRDWMRV Trigger: CACTCGCATCCAGTCTCTGGTGAGCATCCTGCGCACTACGGTCCACCATGCCTTCCCAGTGGTCACGGAGAACCGGGGCAACGAGAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 90 bp | TCACACACGTTGCGCAGCTCGCTGGAAGGGTACGACTTCATGGACTaGCCCCGCTTGCGCTGCTCACCAGCACGGGTCAGGATACTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SHTLRSSLEGYDFMD*PRLRCSPARVRILD Trigger: ATCCAGTATCCTGACCCGTGCTGGTGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTACCCTTCCAGCGAGCTGCGCAACGTGTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 90 bp | GCTCCTCAGAAGCCACATGCTCATCACACACGTTGCGCAGCTCGCTaGAAGGGTACGACTTCATGGACTGGCCCCGCTTGCGCTGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: APQKPHAHHTRCAAR*KGTTSWTGPACAAH Trigger: GTGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTACCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGCATGTGGCTTCTGAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCACACTCCGAACTTCAGTaGGGTGAAGAGTCGCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: QASEQTGEWEPSCRLWGPHSELQ*GEESHG Trigger: TCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGTG...TGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGTCAGAGGGGTTTCGGGTGCACGTaGCGCATACGGTACTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRHLWESGLASAGCNCQRGFGCT*RIRYFA Trigger: TGCAAAGTACCGTATGCGCAACGTGCACCCGAAACC...CCTCTGACAGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CAA 90 bp | TCATGCCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCACCTGCAGAGGCACCTCTTCACTGGCTCTCAGCTaGTCCATTTCCACGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SCRLWGPVSERATCRGTSSLALS*SISTSV Trigger: GACAGACGTGGAAATGGACAAGCTGAGAGCCAGTGA...AGAGGTGCCTCTGCAGGTGGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS GCA 90 bp | AGCCCAGGAGCTCCAGGAGGGACAGGGCAAGGCAGCCCTTCTGACTaGATTCCTCCACCGACGTTTGAACCACTCCGAACTTCAGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGAPGGTGQGSPSD*IPPPTFEPLRTSVG Trigger: CCCAACTGAAGTTCGGAGTGGTTCAAACGTCGGTGGAGGAATGCAGTCAGAAGGGCTGCCTTGCCCTGTCCCTCCTGGAGCTCCTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030879.12 |
||
| CDS CCA 90 bp | AACTCCTTCTCGTTGCCCCGGTTCTCCGTGACCACTGGGAAGGCATaGTGGACCGTAGTGCGCAGGATGCTCACCAGAGACTGGATGCGA | + |
|
Preference number: 5 (lower is better) Translates to: NSFSLPRFSVTTGKA*WTVVRRMLTRDWMR Trigger: TCGCATCCAGTCTCTGGTGAGCATCCTGCGCACTACGGTCCACCATGCCTTCCCAGTGGTCACGGAGAACCGGGGCAACGAGAAGGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 90 bp | GCCCTTCATGAACTCCTTCTCGTTGCCCCGGTTCTCCGTGACCACTaGGAAGGCATGGTGGACCGTAGTGCGCAGGATGCTCACCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALHELLLVAPVLRDH*EGMVDRSAQDAHQR Trigger: TCTCTGGTGAGCATCCTGCGCACTACGGTCCACCATGCCTTCCCAGTGGTCACGGAGAACCGGGGCAACGAGAAGGAGTTCATGAAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 90 bp | GCAGGACAAGGCCGTGAAAGGTCAGCGGACGGAAACGCTCCTCCATaGTCCAGTCTTCACTCGGGGACTGGTCAGGGTATAGGTTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGQGRERSADGNAPP*SSLHSGTGQGIGWG Trigger: ACCCCAACCTATACCCTGACCAGTCCCCGAGTGAAGACTGGACCATGGAGGAGCGTTTCCGTCCGCTGACCTTTCACGGCCTTGTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | AGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGCTCTTGTTCAGACAGTaGAATGTGGCTCCCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RHLSKRVSGSLHAGCGGQLLFRQ*NVAPRR Trigger: CCTCCTGGGAGCCACATTCAACTGTCTGAACAAGAG...CTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS GCA 90 bp | TGCTGTAGCAGGTCCTCCTTCTCTGCCGGCTCCTCAGAAGCCACATaGTCATCACACACGTTGCGCAGCTCGCTGGAAGGGTACGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: CCSRSSFSAGSSEAT*SSHTLRSSLEGYDF Trigger: GAAGTCGTACCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGCATGTGGCTTCTGAGGAGCCGGCAGAGAAGGAGGACCTGCTACAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS-3UTR CAA 90 bp | TTCCGAATAGCACACTCCTCGGACAAGCAGGGTGACAAGCTGAGAGCGCAGGACAGCACCCCAAAGACTTaGCAGAGCAGGGTCCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRIAHSSDKQGDKLRAQDSTPKT*QSRVRS Trigger: GCTCCGGACCCTGCTCTGCAAAGTCTTTGGGGTGCT...GTCCTGCGCTCTCAGCTTGTCACCCTGCTTGTCCGAGGAGTGTGCTATTCGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTAAGTGAGCGGGCCACCTGCAGATTGCTTATGAGCTGGTaGCCCTTCATGAACTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WEPSCRLWGPVSERATCRLLMSW*PFMNSF Trigger: GAAGGAGTTCATGAAGGGCAACCAGCTCATAAGCAA...TCTGCAGGTGGCCCGCTCACTTACTGGCCCCCACAGCCGGCATGAAGGCTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | GCCACCTGCAGAGGCACCTCTGGGAGAGTGGGCTGGCTTCAGCCGGGTGCAACTGAACAGGTTGAACACTaGAGAAACATGGGTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATCRGTSGRVGWLQPGATEQVEH*RNMGVG Trigger: CCCAACACCCATGTTTCTCAAGTGTTCAACCTGTTC...AGTTGCACCCGGCTGAAGCCAGCCCACTCTCCCAGAGGTGCCTCTGCAGGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| CDS TCA 90 bp | CCACCGCTGCAGAGGACGTTTGAACCACTCCGAACTTCAGTTGGGTaGAGAGTCGCACGGAAAAGTCCACAAAGAGACCCACCAGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPLQRTFEPLRTSVG*RVARKSPQRDPPAP Trigger: CGGGGCTGGTGGGTCTCTTTGTGGACTTTTCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGTGGTTCAAACGTCCTCTGCAGCGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 90 bp | CGGAAAAGTCCACAAAGAGACCCACCAGCCCCGTACAGACGCCAATaGCGAACACCACCATCCACTTCACCGCCTCGTATCTTCGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RKSPQRDPPAPYRRQ*RTPPSTSPPRIFAL Trigger: AAGGGCGAAGATACGAGGCGGTGAAGTGGATGGTGGTGTTCGCCATTGGCGTCTGTACGGGGCTGGTGGGTCTCTTTGTGGACTTTTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS-3UTR CAA 90 bp | CTTCCAGGACTCCAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTCTTGTTCAGACAGTaGAATGTGGCTCCCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGLQASEQTGEWEPSCRLLFRQ*NVAPRR Trigger: CCTCCTGGGAGCCACATTCAACTGTCTGAACAAGAG...CCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTGGAGTCCTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS-3UTR CAA 90 bp | AAGAAACAGCAACAGAGAGGTACCAAGTGTCCACCTAGGATCCAGCCCGACGGCTGCTCATCACACACGTaGCGCAGCTCGCTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KKQQQRGTKCPPRIQPDGCSSHT*RSSLEG Trigger: CCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGCA...GCCGTCGGGCTGGATCCTAGGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| CDS GCA 90 bp | GACTGTGAGGCTGATGGTCATCCTTACAACCCCACCCAAGAAAGCTaGCGCACCAATCAGGGCAAAGGTCCCAGAATAGAGGTGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DCEADGHPYNPTQES*RTNQGKGPRIEVAQ Trigger: CTGGGCCACCTCTATTCTGGGACCTTTGCCCTGATTGGTGCGGCAGCTTTCTTGGGTGGGGTTGTAAGGATGACCATCAGCCTCACAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS GCA 90 bp | AGCTCGCTGGAAGGGTACGACTTCATGGACTGGCCCCGCTTGCGCTaGTCACCAGCACGGGTCAGGATACTGGATTTCTTGAACTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSLEGYDFMDWPRLR*SPARVRILDFLNLM Trigger: CATCAAGTTCAAGAAATCCAGTATCCTGACCCGTGCTGGTGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTACCCTTCCAGCGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CCA 90 bp | CCTCCATGGTCCAGTCTTCACTCGGGGACTGGTCAGGGTATAGGTTaGGGTAGGGAGTGTATCTCCTCTCCAGCATCTGCTGTAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPWSSLHSGTGQGIG*GRECISSPASAVAG Trigger: ACCTGCTACAGCAGATGCTGGAGAGGAGATACACTCCCTACCCCAACCTATACCCTGACCAGTCCCCGAGTGAAGACTGGACCATGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| CDS-3UTR CAA 90 bp | GTATCGCGGGTAGTCCTCAGCCATCTCAGCGTAAGAAAGACGTGGTTGGCTGGCCACTCCGAACTTCAGTaGGGTGAAGAGTCGCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSRVVLSHLSVRKTWLAGHSELQ*GEESHG Trigger: TCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGTG...GCCAGCCAACCACGTCTTTCTTACGCTGAGATGGCTGAGGACTACCCGCGATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
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| CDS TCA 90 bp | TGCATTCCTCCACCGACGTTTGAACCACTCCGAACTTCAGTTGGGTaGAGAGTCGCACGGAAAAGTCCACAAAGAGACCCACCAGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CIPPPTFEPLRTSVG*RVARKSPQRDPPAP Trigger: CGGGGCTGGTGGGTCTCTTTGTGGACTTTTCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGTGGTTCAAACGTCGGTGGAGGAATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030879.12 |
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| CDS CCA 90 bp | GTCCAAAAGCTGCTCCACACAGCAGGGAAGGCACGAAGAGGCCACTaGGGACAGATGTGCCAAAAGTCCAGCATGCGAGCAGGAAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: VQKLLHTAGKARRGH*GQMCQKSSMRAGNR Trigger: TCTATTTCCTGCTCGCATGCTGGACTTTTGGCACATCTGTCCCCAGTGGCCTCTTCGTGCCTTCCCTGCTGTGTGGAGCAGCTTTTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS-3UTR CAA 90 bp | GCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGTATTGAACTTGATGTTGTaGCTTATGAGCTGGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASEQTGEWEPSCRLWGPVLNLML*LMSWLP Trigger: GGGCAACCAGCTCATAAGCAACAACATCAAGTTCAA...TACTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS GCA 90 bp | TCTGACGAGCTTAGGTTTCGGGTGCACGTTGCGCATACGGTACTTTaGAAGCCTCTTGTTCAGACAGTTGAATGTGGCTCCCAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SDELRFRVHVAHTVL*KPLVQTVECGSQEA Trigger: GGCCTCCTGGGAGCCACATTCAACTGTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGCAACGTGCACCCGAAACCTAAGCTCGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CCA 90 bp | CGGTTTGACTCGTGGAAGACATCTGTCGGCATTCTCCTAACACCATaGAGGCCACAAACACCACCACAGTGGTCACCAGGGACACCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RFDSWKTSVGILLTP*RPQTPPQWSPGTPR Trigger: TCTTGGTGTCCCTGGTGACCACTGTGGTGGTGTTTGTGGCCTCCATGGTGTTAGGAGAATGCCGACAGATGTCTTCCACGAGTCAAACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS-3UTR CAA 90 bp | GGCCTGCAGGAATTCATTTGTCAGGTTGTGCCGTGTAATGATCCCCACGATCTCATGAACTCCTTCTCGTaGCCCCGGTTCTCCGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: GLQEFICQVVPCNDPHDLMNSFS*PRFSVT Trigger: GGTCACGGAGAACCGGGGCAACGAGAAGGAGTTCAT...GAGATCGTGGGGATCATTACACGGCACAACCTGACAAATGAATTCCTGCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
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| CDS-3UTR CAA 90 bp | CAGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCATTCTTGAACTTGATGTaGTTGCTTATGAGCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QASEQTGEWEPSCRLWGPFLNLM*LLMSWL Trigger: CAACCAGCTCATAAGCAACAACATCAAGTTCAAGAA...TGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS TCA 90 bp | GGAGCCGGACAATTCCTGGCACTTTCACACCATTCAGGTAGCACTTaGTCTCGGGGATTCCAGAACCTGCTGCCACTGGCTCTATCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GAGQFLALSHHSGST*SRGFQNLLPLALSR Trigger: TCTTGATAGAGCCAGTGGCAGCAGGTTCTGGAATCCCCGAGATCAAGTGCTACCTGAATGGTGTGAAAGTGCCAGGAATTGTCCGGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCCTCAGTCCAACACCTTCCCGGGAGGGTCTGGGCAAGAGCTGGGCTCTCCTTCTTGAACTTGATGTaGTTGCTTATGAGCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FASVQHLPGRVWARAGLSFLNLM*LLMSWL Trigger: CAACCAGCTCATAAGCAACAACATCAAGTTCAAGAA...GGAGAGCCCAGCTCTTGCCCAGACCCTCCCGGGAAGGTGTTGGACTGAGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | AGGCATCTGAGCAAACGGGTGAGTGGGAGCCTTCATGCCGGCTGTGGGGGCCAGAGGATACTGGATTTCTaGAACTTGATGTTGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RHLSKRVSGSLHAGCGGQRILDF*NLMLLL Trigger: AAGCAACAACATCAAGTTCAAGAAATCCAGTATCCT...CTGGCCCCCACAGCCGGCATGAAGGCTCCCACTCACCCGTTTGCTCAGATGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGGTCTGGGCAAGAGCTGGGCTCTCCAAGAAACAGCAACAGAGAGGTACCAGAACAGGTTGAACACTaGAGAAACATGGGTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGSGQELGSPRNSNREVPEQVEH*RNMGVG Trigger: CCCAACACCCATGTTTCTCAAGTGTTCAACCTGTTC...TGGTACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAGCTCTTGCCCAGACCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS GCA 90 bp | GACACCAAGAGGCTCTCTAAGACTCTGACGAGCTTAGGTTTCGGGTaGACGTTGCGCATACGGTACTTTGCAAGCCTCTTGTTCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: DTKRLSKTLTSLGFG*TLRIRYFASLLFRQ Trigger: CTGTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGCAACGTGCACCCGAAACCTAAGCTCGTCAGAGTCTTAGAGAGCCTCTTGGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGCTCTCCAAGAAACAGCAACAGAGAGGTACCAAGTGTCCACCTAGGATCCTGCGCATACGGTACTTaGCAAGCCTCTTGTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LGSPRNSNREVPSVHLGSCAYGT*QASCSD Trigger: GTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGCA...GGATCCTAGGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCGCAGGCCCATGGTTCTGAACAGGTTGAACACTTGAGAAACATGGGTGTTTCACTGGCTCTCAGCTaGTCCATTTCCACGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VAQAHGSEQVEHLRNMGVSLALS*SISTSV Trigger: GACAGACGTGGAAATGGACAAGCTGAGAGCCAGTGA...AACACCCATGTTTCTCAAGTGTTCAACCTGTTCAGAACCATGGGCCTGCGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CAA 90 bp | AAGAAACAGCAACAGAGAGGTACCAAGTGTCCACCTAGGATCCAGCCCGACGGCTTGCTTATGAGCTGGTaGCCCTTCATGAACTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KKQQQRGTKCPPRIQPDGLLMSW*PFMNSF Trigger: GAAGGAGTTCATGAAGGGCAACCAGCTCATAAGCAA...GCCGTCGGGCTGGATCCTAGGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS TCA 90 bp | TCCCATCCTGATGGAAGAGCTGCAGGATGGCAGACTCCTGGGAGTTaGAGAAGAGTGTGGCCATGTCATTGTAAGTGTCATTGGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SHPDGRAAGWQTPGS*RRVWPCHCKCHWDR Trigger: TCTGTCCCAATGACACTTACAATGACATGGCCACACTCTTCTTCAACTCCCAGGAGTCTGCCATCCTGCAGCTCTTCCATCAGGATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS TCA 90 bp | CTTGCTTTGCACGGGGAAGCTGGATCACCAGTGACCCAGAAAGAGTaGAGGGTAGAGAATAAGAACAGGCCAGAGAAACTACACCAACGG | + |
|
Preference number: 5 (lower is better) Translates to: LALHGEAGSPVTQKE*RVENKNRPEKLHQR Trigger: CCGTTGGTGTAGTTTCTCTGGCCTGTTCTTATTCTCTACCCTTCACTCTTTCTGGGTCACTGGTGATCCAGCTTCCCCGTGCAAAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
||
| CDS GCA 90 bp | TTTCACACCATTCAGGTAGCACTTGATCTCGGGGATTCCAGAACCTaGTGCCACTGGCTCTATCAAGACAAGAAGGCTTGCCAGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FHTIQVALDLGDSRT*CHWLYQDKKACQED Trigger: GTCTTCCTGGCAAGCCTTCTTGTCTTGATAGAGCCAGTGGCAGCAGGTTCTGGAATCCCCGAGATCAAGTGCTACCTGAATGGTGTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCCCAAACATGGGGAACAGTTCTTAGTGCCCAATTCTTGAACCTAGTAATGATGAACTCCTTCTCGTaGCCCCGGTTCTCCGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: PPQTWGTVLSAQFLNLVMMNSFS*PRFSVT Trigger: GGTCACGGAGAACCGGGGCAACGAGAAGGAGTTCAT...CATTACTAGGTTCAAGAATTGGGCACTAAGAACTGTTCCCCATGTTTGGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS TCA 90 bp | ACATCTTCTGATGTGACCTGGAGCTGGAATGAGCCATTACCGGTTTaGCTCGTGGAAGACATCTGTCGGCATTCTCCTAACACCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSSDVTWSWNEPLPV*LVEDICRHSPNTME Trigger: CTCCATGGTGTTAGGAGAATGCCGACAGATGTCTTCCACGAGTCAAACCGGTAATGGCTCATTCCAGCTCCAGGTCACATCAGAAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCTACAATTCTGCAAACCCACCAGGCTGGGAAGACAGTTCTGTGGTGTGTTTGCTTATGAGCTGGTaGCCCTTCATGAACTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TGYNSANPPGWEDSSVVCLLMSW*PFMNSF Trigger: GAAGGAGTTCATGAAGGGCAACCAGCTCATAAGCAA...ACACACCACAGAACTGTCTTCCCAGCCTGGTGGGTTTGCAGAATTGTAGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGCTCTCCAAGAAACAGCAACAGAGAGGTACCAAGTGTCCACCTAGGATCCTTGAACTTGATGTTGTaGCTTATGAGCTGGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGSPRNSNREVPSVHLGSLNLML*LMSWLP Trigger: GGGCAACCAGCTCATAAGCAACAACATCAAGTTCAA...GGATCCTAGGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTTGGAGAGCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTCATGTATGTCCGGGTATCGCGGGTAGTCCTCAGCCATCTCAGCGTAAGCTGGATTTCTTGAACTaGATGTTGTTGCTTATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGHVCPGIAGSPQPSQRKLDFLN*MLLLMS Trigger: GCTCATAAGCAACAACATCAAGTTCAAGAAATCCAG...CTTACGCTGAGATGGCTGAGGACTACCCGCGATACCCGGACATACATGACCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CAA 90 bp | GTAAGGGTCATTGATGCAGCGGTCATAGTCCAGACTCTCATAGTCTTTCCTTGGTCAAGTTTTCCCAGCTaGCTTTGCACGGGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VRVIDAAVIVQTLIVFPWSSFPS*LCTGKL Trigger: CAGCTTCCCCGTGCAAAGCAAGCTGGGAAAACTTGA...CCAAGGAAAGACTATGAGAGTCTGGACTATGACCGCTGCATCAATGACCCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
||
| CDS CCA 90 bp | GTCAGGATACTGGATTTCTTGAACTTGATGTTGTTGCTTATGAGCTaGTTGCCCTTCATGAACTCCTTCTCGTTGCCCCGGTTCTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: VRILDFLNLMLLLMS*LPFMNSFSLPRFSV Trigger: CACGGAGAACCGGGGCAACGAGAAGGAGTTCATGAAGGGCAACCAGCTCATAAGCAACAACATCAAGTTCAAGAAATCCAGTATCCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGGTGTTGGGGGAGACGGTAAATGGTGAAGGATTCATATATGGGGTGACATGCGCATACGGTACTTaGCAAGCCTCTTGTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TWVLGETVNGEGFIYGVTCAYGT*QASCSD Trigger: GTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGCA...TGTCACCCCATATATGAATCCTTCACCATTTACCGTCTCCCCCAACACCCATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CAA 90 bp | AGCCGGGCCTGCAGGAATTCATTTGTCAGGTTGTGCCGTGTAATGATCCCCACGTTCTTGAACTTGATGTaGTTGCTTATGAGCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRACRNSFVRLCRVMIPTFLNLM*LLMSWL Trigger: CAACCAGCTCATAAGCAACAACATCAAGTTCAAGAA...CGTGGGGATCATTACACGGCACAACCTGACAAATGAATTCCTGCAGGCCCGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CAA 90 bp | AAGAAACAGCAACAGAGAGGTACCAAGTGTCCACCTAGGATCCAGCCCGACGGCCTGGATTTCTTGAACTaGATGTTGTTGCTTATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KKQQQRGTKCPPRIQPDGLDFLN*MLLLMS Trigger: GCTCATAAGCAACAACATCAAGTTCAAGAAATCCAG...GCCGTCGGGCTGGATCCTAGGTGGACACTTGGTACCTCTCTGTTGCTGTTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGAATGAGTCTAAAGACATTCAAGCCACGGGGTCAGAGCATGAACCCGCTCTACTTTGCAAGCCTCTaGTTCAGACAGTTGAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGMSLKTFKPRGQSMNPLYFASL*FRQLNV Trigger: CACATTCAACTGTCTGAACAAGAGGCTTGCAAAGTA...GAGCGGGTTCATGCTCTGACCCCGTGGCTTGAATGTCTTTAGACTCATTCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | ATCCACAATCATTCGGGGATTCAGCAGTGTGAGGTCCAGGTCATGTATGTCCGGTACTTTGCAAGCCTCTaGTTCAGACAGTTGAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: IHNHSGIQQCEVQVMYVRYFASL*FRQLNV Trigger: CACATTCAACTGTCTGAACAAGAGGCTTGCAAAGTA...CCGGACATACATGACCTGGACCTCACACTGCTGAATCCCCGAATGATTGTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105711.3 |
||
| CDS-3UTR CAA 90 bp | ATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTCAGGAAGGTTTCGGGTGCACGTaGCGCATACGGTACTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MLQRLLAGILVHQGSGQEGFGCT*RIRYFA Trigger: TGCAAAGTACCGTATGCGCAACGTGCACCCGAAACC...TTCCTGACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | CAAACATGGGGAACAGTTCTTAGTGCCCAATTCTTGAACCTAGTAATGAACATGTCACTGGCTCTCAGCTaGTCCATTTCCACGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QTWGTVLSAQFLNLVMNMSLALS*SISTSV Trigger: GACAGACGTGGAAATGGACAAGCTGAGAGCCAGTGA...CATGTTCATTACTAGGTTCAAGAATTGGGCACTAAGAACTGTTCCCCATGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | GGTCAGAGCATGAACCCGCTCCTAGGAAACAGAAGGAGAAGAAAGTTGGGCCAAAGGATACTGGATTTCTaGAACTTGATGTTGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GQSMNPLLGNRRRRKLGQRILDF*NLMLLL Trigger: AAGCAACAACATCAAGTTCAAGAAATCCAGTATCCT...TTGGCCCAACTTTCTTCTCCTTCTGTTTCCTAGGAGCGGGTTCATGCTCTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | TGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTCTCTTGTTCAGACAGTaGAATGTGGCTCCCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WDLMLQRLLAGILVHQGSLLFRQ*NVAPRR Trigger: CCTCCTGGGAGCCACATTCAACTGTCTGAACAAGAG...AGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGCGCATACGGTACTTaGCAAGCCTCTTGTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VGFNASKAVSWNFSASRICAYGT*QASCSD Trigger: GTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGCA...GATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGGGAGAAGCTGTCCCCCTGTGGTGGGATTTAATGCTTCAAAGGCTGTTAGGATACTGGATTTCTaGAACTTGATGTTGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TEGRSCPPVVGFNASKAVRILDF*NLMLLL Trigger: AAGCAACAACATCAAGTTCAAGAAATCCAGTATCCT...AACAGCCTTTGAAGCATTAAATCCCACCACAGGGGGACAGCTTCTCCCTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGAATCTAAAACAAATGAATGCCACATGTATCCAAAGAACAGCTGCCACAGGTTTCGGGTGCACGTaGCGCATACGGTACTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KKNLKQMNATCIQRTAATGFGCT*RIRYFA Trigger: TGCAAAGTACCGTATGCGCAACGTGCACCCGAAACC...TGTGGCAGCTGTTCTTTGGATACATGTGGCATTCATTTGTTTTAGATTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTGGTCAGGAATTGAACTTGATGTTGTaGCTTATGAGCTGGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MLQRLLAGILVHQGSGQELNLML*LMSWLP Trigger: GGGCAACCAGCTCATAAGCAACAACATCAAGTTCAA...TTCCTGACCAGATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCTACTTTGCAAGCCTCTaGTTCAGACAGTTGAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGFNASKAVSWNFSASRIYFASL*FRQLNV Trigger: CACATTCAACTGTCTGAACAAGAGGCTTGCAAAGTA...GATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGATTTAATGCTTCAAAGGCTGTTAGCTGGAATTTTAGTGCATCAAGGATCCTGGATTTCTTGAACTaGATGTTGTTGCTTATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGFNASKAVSWNFSASRILDFLN*MLLLMS Trigger: GCTCATAAGCAACAACATCAAGTTCAAGAAATCCAG...GATCCTTGATGCACTAAAATTCCAGCTAACAGCCTTTGAAGCATTAAATCCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS GCA 72 bp | CCTGTGTCTCCCCAAGGATGGTCAGCTCCTCGGGGGTaGGGCTCTCCCGTTCACCGCAGCAGCAACACCACC | + |
|
Preference number: 6 (lower is better) Translates to: PVSPQGWSAPRG*GSPVHRSSNTT Trigger: GGTGGTGTTGCTGCTGCGGTGAACGGGAGAGCCGCACCCCCGAGGAGCTGACCATCCTTGGGGAGACACAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 72 bp | TTGCGCAGCTCGCTGGAAGGGTACGACTTCATGGACTaGCCCCGCTTGCGCTGCTCACCAGCACGGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LRSSLEGYDFMD*PRLRCSPARVR Trigger: CCTGACCCGTGCTGGTGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTACCCTTCCAGCGAGCTGCGCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 72 bp | ACACGTTGCGCAGCTCGCTGGAAGGGTACGACTTCATaGACTGGCCCCGCTTGCGCTGCTCACCAGCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: TRCAARWKGTTS*TGPACAAHQHG Trigger: CCCGTGCTGGTGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTACCCTTCCAGCGAGCTGCGCAACGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 72 bp | TTGCCCCGGTTCTCCGTGACCACTGGGAAGGCATGGTaGACCGTAGTGCGCAGGATGCTCACCAGAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPRFSVTTGKAW*TVVRRMLTRDW Trigger: CCAGTCTCTGGTGAGCATCCTGCGCACTACGGTCCACCATGCCTTCCCAGTGGTCACGGAGAACCGGGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 72 bp | TCGTTGCCCCGGTTCTCCGTGACCACTGGGAAGGCATaGTGGACCGTAGTGCGCAGGATGCTCACCAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLPRFSVTTGKA*WTVVRRMLTRD Trigger: GTCTCTGGTGAGCATCCTGCGCACTACGGTCCACCATGCCTTCCCAGTGGTCACGGAGAACCGGGGCAACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 90 bp | TCCTTCTCTGCCGGCTCCTCAGAAGCCACATGCTCATCACACACGTaGCGCAGCTCGCTGGAAGGGTACGACTTCATGGACTGGCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SFSAGSSEATCSSHT*RSSLEGYDFMDWPR Trigger: GCGGGGCCAGTCCATGAAGTCGTACCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGCATGTGGCTTCTGAGGAGCCGGCAGAGAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS GCA 72 bp | CGCTGGAAGGGTACGACTTCATGGACTGGCCCCGCTTaGGCTGCTCACCAGCACGGGTCAGGATACTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: RWKGTTSWTGPA*AAHQHGSGYWI Trigger: AATCCAGTATCCTGACCCGTGCTGGTGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTACCCTTCCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS GCA 72 bp | AGGTCCTCCTTCTCTGCCGGCTCCTCAGAAGCCACATaGTCATCACACACGTTGCGCAGCTCGCTGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSFSAGSSEAT*SSHTLRSSLEG Trigger: CCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGCATGTGGCTTCTGAGGAGCCGGCAGAGAAGGAGGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS GCA 72 bp | GCTCCAGGAGGGACAGGGCAAGGCAGCCCTTCTGACTaGATTCCTCCACCGCTGCAGAGGACGTTTGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: APGGTGQGSPSD*IPPPLQRTFEP Trigger: TGGTTCAAACGTCCTCTGCAGCGGTGGAGGAATGCAGTCAGAAGGGCTGCCTTGCCCTGTCCCTCCTGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 72 bp | GAACTCCTTCTCGTTGCCCCGGTTCTCCGTGACCACTaGGAAGGCATGGTGGACCGTAGTGCGCAGGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: ELLLVAPVLRDH*EGMVDRSAQDA Trigger: AGCATCCTGCGCACTACGGTCCACCATGCCTTCCCAGTGGTCACGGAGAACCGGGGCAACGAGAAGGAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CAA 72 bp | TCGCTGGAAGGGTACGACTTCATGGACTGGCCCCGCTaGCGCTGCTCACCAGCACGGGTCAGGATACTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLEGYDFMDWPR*RCSPARVRILD Trigger: ATCCAGTATCCTGACCCGTGCTGGTGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTACCCTTCCAGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS GCA 72 bp | GCTCCAGGAGGGACAGGGCAAGGCAGCCCTTCTGACTaGATTCCTCCACCGACGTTTGAACCACTCCGAACT | + |
|
Preference number: 6 (lower is better) Translates to: APGGTGQGSPSD*IPPPTFEPLRT Trigger: AGTTCGGAGTGGTTCAAACGTCGGTGGAGGAATGCAGTCAGAAGGGCTGCCTTGCCCTGTCCCTCCTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030879.12 |
||
| CDS CCA 72 bp | AAGCCACATGCTCATCACACACGTTGCGCAGCTCGCTaGAAGGGTACGACTTCATGGACTGGCCCCGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: KPHAHHTRCAAR*KGTTSWTGPAC Trigger: GCAAGCGGGGCCAGTCCATGAAGTCGTACCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGCATGTGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CCA 72 bp | GGCCGTGAAAGGTCAGCGGACGGAAACGCTCCTCCATaGTCCAGTCTTCACTCGGGGACTGGTCAGGGTATA | + |
|
Preference number: 6 (lower is better) Translates to: GRERSADGNAPP*SSLHSGTGQGI Trigger: TATACCCTGACCAGTCCCCGAGTGAAGACTGGACCATGGAGGAGCGTTTCCGTCCGCTGACCTTTCACGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
||
| CDS CAA 72 bp | GCCGGCTCCTCAGAAGCCACATGCTCATCACACACGTaGCGCAGCTCGCTGGAAGGGTACGACTTCATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AGSSEATCSSHT*RSSLEGYDFMD Trigger: GTCCATGAAGTCGTACCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGCATGTGGCTTCTGAGGAGCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CAA 90 bp | TTGCGCAGCTCGCTGGAAGGGTACGACTTCATGGACTGGCCCCGCTaGCGCTGCTCACCAGCACGGGTCAGGATACTGGATTTCTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LRSSLEGYDFMDWPR*RCSPARVRILDFLN Trigger: GTTCAAGAAATCCAGTATCCTGACCCGTGCTGGTGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTACCCTTCCAGCGAGCTGCGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS GCA 72 bp | GAAGGGTACGACTTCATGGACTGGCCCCGCTTGCGCTaGTCACCAGCACGGGTCAGGATACTGGATTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EGYDFMDWPRLR*SPARVRILDFL Trigger: CAAGAAATCCAGTATCCTGACCCGTGCTGGTGAGCAGCGCAAGCGGGGCCAGTCCATGAAGTCGTACCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS GCA 72 bp | CCGGCTCCTCAGAAGCCACATGCTCATCACACACGTTaGGCAGCTCGCTGGAAGGGTACGACTTCATGGACT | + |
|
Preference number: 6 (lower is better) Translates to: PAPQKPHAHHTR*AARWKGTTSWT Trigger: AGTCCATGAAGTCGTACCCTTCCAGCGAGCTGCGCAACGTGTGTGATGAGCATGTGGCTTCTGAGGAGCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS TCA 72 bp | GGCCTTCTTTCCCCACAAAGAGCCCTCCAGACACACTaGACAGCACCCCAAAGACTTTGCAGAGCAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLLSPQRALQTH*TAPQRLCRAGS Trigger: GGACCCTGCTCTGCAAAGTCTTTGGGGTGCTGTTCAGTGTGTCTGGAGGGCTCTTTGTGGGGAAAGAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS GCA 72 bp | GCAGGGAAGGCACGAAGAGGCCACTGGGGACAGATGTaGCAAAAGTCCAGCATGCGAGCAGGAAATAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGKARRGHWGQM*QKSSMRAGNRG Trigger: TCCTCTATTTCCTGCTCGCATGCTGGACTTTTGGCACATCTGTCCCCAGTGGCCTCTTCGTGCCTTCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CAA 72 bp | GGGTGCACGTTGCGCATACGGTACTTTGCAAGCCTCTaGTTCAGACAGTTGAATGTGGCTCCCAGGAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GCTLRIRYFASL*FRQLNVAPRRP Trigger: GGGCCTCCTGGGAGCCACATTCAACTGTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGCAACGTGCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CAA 72 bp | CTTATGAGCTGGTTGCCCTTCATGAACTCCTTCTCGTaGCCCCGGTTCTCCGTGACCACTGGGAAGGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: LMSWLPFMNSFS*PRFSVTTGKAW Trigger: CCATGCCTTCCCAGTGGTCACGGAGAACCGGGGCAACGAGAAGGAGTTCATGAAGGGCAACCAGCTCATAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
||
| CDS CAA 90 bp | GGACAGGGCAAGGCAGCCCTTCTGACTGCATTCCTCCACCGACGTTaGAACCACTCCGAACTTCAGTTGGGTGAAGAGTCGCACGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: GQGKAALLTAFLHRR*NHSELQLGEESHGK Trigger: TTTTCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGTGGTTCAAACGTCGGTGGAGGAATGCAGTCAGAAGGGCTGCCTTGCCCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030879.12 |
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| CDS TCA 72 bp | GAGTGTGCGGGTAGACGTACGTCAGGTTGGGCTCCATaGTGTCACTGGCTCTCAGCTTGTCCATTTCCACGT | + |
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Preference number: 6 (lower is better) Translates to: ECAGRRTSGWAP*CHWLSACPFPR Trigger: ACGTGGAAATGGACAAGCTGAGAGCCAGTGACATCATGGAGCCCAACCTGACGTACGTCTACCCGCACACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CCA 72 bp | TCGTGGAAGACATCTGTCGGCATTCTCCTAACACCATaGAGGCCACAAACACCACCACAGTGGTCACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SWKTSVGILLTP*RPQTPPQWSPG Trigger: CCCTGGTGACCACTGTGGTGGTGTTTGTGGCCTCCATGGTGTTAGGAGAATGCCGACAGATGTCTTCCACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CCA 72 bp | TCCAGTCTTCACTCGGGGACTGGTCAGGGTATAGGTTaGGGTAGGGAGTGTATCTCCTCTCCAGCATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SSLHSGTGQGIG*GRECISSPASA Trigger: AGCAGATGCTGGAGAGGAGATACACTCCCTACCCCAACCTATACCCTGACCAGTCCCCGAGTGAAGACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030879.12 ENSMUST00000137724.8 |
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| CDS CAA 90 bp | TTAGGTTTCGGGTGCACGTTGCGCATACGGTACTTTGCAAGCCTCTaGTTCAGACAGTTGAATGTGGCTCCCAGGAGGCCCCCAATGACC | + |
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Preference number: 6 (lower is better) Translates to: LGFGCTLRIRYFASL*FRQLNVAPRRPPMT Trigger: GGTCATTGGGGGCCTCCTGGGAGCCACATTCAACTGTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGCAACGTGCACCCGAAACCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 90 bp | ATGTTGTTGCTTATGAGCTGGTTGCCCTTCATGAACTCCTTCTCGTaGCCCCGGTTCTCCGTGACCACTGGGAAGGCATGGTGGACCGTA | + |
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Preference number: 6 (lower is better) Translates to: MLLLMSWLPFMNSFS*PRFSVTTGKAWWTV Trigger: TACGGTCCACCATGCCTTCCCAGTGGTCACGGAGAACCGGGGCAACGAGAAGGAGTTCATGAAGGGCAACCAGCTCATAAGCAACAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 90 bp | TTCCTCCACCGCTGCAGAGGACGTTTGAACCACTCCGAACTTCAGTaGGGTGAAGAGTCGCACGGAAAAGTCCACAAAGAGACCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: FLHRCRGRLNHSELQ*GEESHGKVHKETHQ Trigger: CTGGTGGGTCTCTTTGTGGACTTTTCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGTGGTTCAAACGTCCTCTGCAGCGGTGGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS GCA 72 bp | CAGGTAGCACTTGATCTCGGGGATTCCAGAACCTGCTaGCACTGGCTCTATCAAGACAAGAAGGCTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: QVALDLGDSRTC*HWLYQDKKACQ Trigger: CTGGCAAGCCTTCTTGTCTTGATAGAGCCAGTGGCAGCAGGTTCTGGAATCCCCGAGATCAAGTGCTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS GCA 72 bp | GCTGATGGTCATCCTTACAACCCCACCCAAGAAAGCTaGCGCACCAATCAGGGCAAAGGTCCCAGAATAGAG | + |
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Preference number: 6 (lower is better) Translates to: ADGHPYNPTQES*RTNQGKGPRIE Trigger: CTCTATTCTGGGACCTTTGCCCTGATTGGTGCGGCAGCTTTCTTGGGTGGGGTTGTAAGGATGACCATCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 72 bp | AAGGCAGCCCTTCTGACTGCATTCCTCCACCGACGTTaGAACCACTCCGAACTTCAGTTGGGTGAAGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: KAALLTAFLHRR*NHSELQLGEES Trigger: CGACTCTTCACCCAACTGAAGTTCGGAGTGGTTCAAACGTCGGTGGAGGAATGCAGTCAGAAGGGCTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030879.12 |
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| CDS CAA 90 bp | CTGACTGCATTCCTCCACCGACGTTTGAACCACTCCGAACTTCAGTaGGGTGAAGAGTCGCACGGAAAAGTCCACAAAGAGACCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: LTAFLHRRLNHSELQ*GEESHGKVHKETHQ Trigger: CTGGTGGGTCTCTTTGTGGACTTTTCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGTGGTTCAAACGTCGGTGGAGGAATGCAGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030879.12 |
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| CDS TCA 72 bp | CCACCGACGTTTGAACCACTCCGAACTTCAGTTGGGTaGAGAGTCGCACGGAAAAGTCCACAAAGAGACCCA | + |
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Preference number: 6 (lower is better) Translates to: PPTFEPLRTSVG*RVARKSPQRDP Trigger: TGGGTCTCTTTGTGGACTTTTCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGTGGTTCAAACGTCGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030879.12 |
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| CDS GCA 72 bp | AGGCTCTCTAAGACTCTGACGAGCTTAGGTTTCGGGTaGACGTTGCGCATACGGTACTTTGCAAGCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RLSKTLTSLGFG*TLRIRYFASLL Trigger: CAAGAGGCTTGCAAAGTACCGTATGCGCAACGTGCACCCGAAACCTAAGCTCGTCAGAGTCTTAGAGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CCA 72 bp | CCTGGAGCTGGAATGAGCCATTACCGGTTTGACTCGTaGAAGACATCTGTCGGCATTCTCCTAACACCATGG | + |
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Preference number: 6 (lower is better) Translates to: PGAGMSHYRFDS*KTSVGILLTPW Trigger: CCATGGTGTTAGGAGAATGCCGACAGATGTCTTCCACGAGTCAAACCGGTAATGGCTCATTCCAGCTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 72 bp | CGCTGCAGAGGACGTTTGAACCACTCCGAACTTCAGTaGGGTGAAGAGTCGCACGGAAAAGTCCACAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RCRGRLNHSELQ*GEESHGKVHKE Trigger: CTCTTTGTGGACTTTTCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGTGGTTCAAACGTCCTCTGCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS TCA 72 bp | GATGTGACCTGGAGCTGGAATGAGCCATTACCGGTTTaGCTCGTGGAAGACATCTGTCGGCATTCTCCTAAC | + |
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Preference number: 6 (lower is better) Translates to: DVTWSWNEPLPV*LVEDICRHSPN Trigger: GTTAGGAGAATGCCGACAGATGTCTTCCACGAGTCAAACCGGTAATGGCTCATTCCAGCTCCAGGTCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS TCA 72 bp | CAGAGGACGTTTGAACCACTCCGAACTTCAGTTGGGTaGAGAGTCGCACGGAAAAGTCCACAAAGAGACCCA | + |
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Preference number: 6 (lower is better) Translates to: QRTFEPLRTSVG*RVARKSPQRDP Trigger: TGGGTCTCTTTGTGGACTTTTCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGTGGTTCAAACGTCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS GCA 72 bp | ACCTGCTGCCACTGGCTCTATCAAGACAAGAAGGCTTaGCAGGAAGACAAAGGTCAAGTTAAAGCCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TCCHWLYQDKKA*QEDKGQVKAQE Trigger: CTCCTGGGCTTTAACTTGACCTTTGTCTTCCTGGCAAGCCTTCTTGTCTTGATAGAGCCAGTGGCAGCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS GCA 72 bp | ATTCAGGTAGCACTTGATCTCGGGGATTCCAGAACCTaGTGCCACTGGCTCTATCAAGACAAGAAGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: IQVALDLGDSRT*CHWLYQDKKAC Trigger: GCAAGCCTTCTTGTCTTGATAGAGCCAGTGGCAGCAGGTTCTGGAATCCCCGAGATCAAGTGCTACCTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS GCA 72 bp | CTTAGGTTTCGGGTGCACGTTGCGCATACGGTACTTTaGAAGCCTCTTGTTCAGACAGTTGAATGTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LRFRVHVAHTVL*KPLVQTVECGS Trigger: GGAGCCACATTCAACTGTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGCAACGTGCACCCGAAACCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 72 bp | TTCCTCCACCGACGTTTGAACCACTCCGAACTTCAGTaGGGTGAAGAGTCGCACGGAAAAGTCCACAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: FLHRRLNHSELQ*GEESHGKVHKE Trigger: CTCTTTGTGGACTTTTCCGTGCGACTCTTCACCCAACTGAAGTTCGGAGTGGTTCAAACGTCGGTGGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030879.12 |
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| CDS CAA 72 bp | CGCTGCTCACCAGCACGGGTCAGGATACTGGATTTCTaGAACTTGATGTTGTTGCTTATGAGCTGGTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RCSPARVRILDF*NLMLLLMSWLP Trigger: GGGCAACCAGCTCATAAGCAACAACATCAAGTTCAAGAAATCCAGTATCCTGACCCGTGCTGGTGAGCAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 72 bp | GCGTCACGTCCCGCGCAAGGGCTCATTCTACAATGCTaGCTTCGTTCAAAACTCAAAGAGAATATGGACGGC | + |
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Preference number: 6 (lower is better) Translates to: ASRPAQGLILQC*LRSKLKENMDG Trigger: GCCGTCCATATTCTCTTTGAGTTTTGAACGAAGCAAGCATTGTAGAATGAGCCCTTGCGCGGGACGTGACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
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| CDS TCA 72 bp | CTCTCAGCCCAATATGGACGTCATAAATGCCCTTGTTaGACAAGTCTCCAGTCCACTTGGCCACCATCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LSAQYGRHKCPC*TSLQSTWPPSE Trigger: CTCTGATGGTGGCCAAGTGGACTGGAGACTTGTTCAACAAGGGCATTTATGACGTCCATATTGGGCTGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS GCA 72 bp | CGTCACGTCCCGCGCAAGGGCTCATTCTACAATGCTTaGTTCGTTCAAAACTCAAAGAGAATATGGACGGCA | + |
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Preference number: 6 (lower is better) Translates to: RHVPRKGSFYNA*FVQNSKRIWTA Trigger: TGCCGTCCATATTCTCTTTGAGTTTTGAACGAAGCAAGCATTGTAGAATGAGCCCTTGCGCGGGACGTGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131232.2 |
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| CDS CAA 72 bp | TCTAAGACTCTGACGAGCTTAGGTTTCGGGTGCACGTaGCGCATACGGTACTTTGCAAGCCTCTTGTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SKTLTSLGFGCT*RIRYFASLLFR Trigger: TCTGAACAAGAGGCTTGCAAAGTACCGTATGCGCAACGTGCACCCGAAACCTAAGCTCGTCAGAGTCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 90 bp | AAGAGGCTCTCTAAGACTCTGACGAGCTTAGGTTTCGGGTGCACGTaGCGCATACGGTACTTTGCAAGCCTCTTGTTCAGACAGTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: KRLSKTLTSLGFGCT*RIRYFASLLFRQLN Trigger: ATTCAACTGTCTGAACAAGAGGCTTGCAAAGTACCGTATGCGCAACGTGCACCCGAAACCTAAGCTCGTCAGAGTCTTAGAGAGCCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 90 bp | AGGATACTGGATTTCTTGAACTTGATGTTGTTGCTTATGAGCTGGTaGCCCTTCATGAACTCCTTCTCGTTGCCCCGGTTCTCCGTGACC | + |
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Preference number: 6 (lower is better) Translates to: RILDFLNLMLLLMSW*PFMNSFSLPRFSVT Trigger: GGTCACGGAGAACCGGGGCAACGAGAAGGAGTTCATGAAGGGCAACCAGCTCATAAGCAACAACATCAAGTTCAAGAAATCCAGTATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 90 bp | TCACCAGCACGGGTCAGGATACTGGATTTCTTGAACTTGATGTTGTaGCTTATGAGCTGGTTGCCCTTCATGAACTCCTTCTCGTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SPARVRILDFLNLML*LMSWLPFMNSFSLP Trigger: GGGCAACGAGAAGGAGTTCATGAAGGGCAACCAGCTCATAAGCAACAACATCAAGTTCAAGAAATCCAGTATCCTGACCCGTGCTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CCA 72 bp | CTGGATTTCTTGAACTTGATGTTGTTGCTTATGAGCTaGTTGCCCTTCATGAACTCCTTCTCGTTGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: LDFLNLMLLLMS*LPFMNSFSLPR Trigger: CCGGGGCAACGAGAAGGAGTTCATGAAGGGCAACCAGCTCATAAGCAACAACATCAAGTTCAAGAAATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 90 bp | TGCTCACCAGCACGGGTCAGGATACTGGATTTCTTGAACTTGATGTaGTTGCTTATGAGCTGGTTGCCCTTCATGAACTCCTTCTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: CSPARVRILDFLNLM*LLMSWLPFMNSFSL Trigger: CAACGAGAAGGAGTTCATGAAGGGCAACCAGCTCATAAGCAACAACATCAAGTTCAAGAAATCCAGTATCCTGACCCGTGCTGGTGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 72 bp | GATTTCTTGAACTTGATGTTGTTGCTTATGAGCTGGTaGCCCTTCATGAACTCCTTCTCGTTGCCCCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: DFLNLMLLLMSW*PFMNSFSLPRF Trigger: GAACCGGGGCAACGAGAAGGAGTTCATGAAGGGCAACCAGCTCATAAGCAACAACATCAAGTTCAAGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 72 bp | GCACGGGTCAGGATACTGGATTTCTTGAACTTGATGTaGTTGCTTATGAGCTGGTTGCCCTTCATGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: ARVRILDFLNLM*LLMSWLPFMNS Trigger: GGAGTTCATGAAGGGCAACCAGCTCATAAGCAACAACATCAAGTTCAAGAAATCCAGTATCCTGACCCGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 72 bp | TCACCAGCACGGGTCAGGATACTGGATTTCTTGAACTaGATGTTGTTGCTTATGAGCTGGTTGCCCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: SPARVRILDFLN*MLLLMSWLPFM Trigger: CATGAAGGGCAACCAGCTCATAAGCAACAACATCAAGTTCAAGAAATCCAGTATCCTGACCCGTGCTGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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| CDS CAA 72 bp | CGGGTCAGGATACTGGATTTCTTGAACTTGATGTTGTaGCTTATGAGCTGGTTGCCCTTCATGAACTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RVRILDFLNLML*LMSWLPFMNSF Trigger: GAAGGAGTTCATGAAGGGCAACCAGCTCATAAGCAACAACATCAAGTTCAAGAAATCCAGTATCCTGACCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030879.12 ENSMUST00000105711.3 ENSMUST00000137724.8 |
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