Pregenerated sensors for CLCN5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004317Ensembl transcript IDs: ENSMUST00000004428.14, ENSMUST00000115746.8, ENSMUST00000128319.2
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCTCGGCACTCCCAGTAAGGATTTCTGGCTTTGGCCCTTACTGTaGACTGAGCAAACTGCCAATGGCCTCTCACCAGCTGGGGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: ALGTPSKDFWLWPLL*TEQTANGLSPAGEV Trigger: AACCTCCCCAGCTGGTGAGAGGCCATTGGCAGTTTGCTCAGTCCACAGTAAGGGCCAAAGCCAGAAATCCTTACTGGGAGTGCCGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR TCA 90 bp | TGCTGGGGAGGAGTGGGTTATTCACCGGCATGTGCCAGGGGCTGCTaGGCCTGTACTAGAAGGATAGCGGGAGAGATTAGGAATAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: CWGGVGYSPACARGC*ACTRRIAGEIRNRL Trigger: AAGCCTATTCCTAATCTCTCCCGCTATCCTTCTAGTACAGGCTCAGCAGCCCCTGGCACATGCCGGTGAATAACCCACTCCTCCCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR TCA 90 bp | GTGAATCACATTTTTCCAAGAGCTGCTCTCCTTGGAACAAATGGCTaGTCGGGAAGCAAAGGCCAGCAACTGCCAGCTCTGCTGTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: VNHIFPRAALLGTNG*SGSKGQQLPALLCP Trigger: TGGGCACAGCAGAGCTGGCAGTTGCTGGCCTTTGCTTCCCGATCAGCCATTTGTTCCAAGGAGAGCAGCTCTTGGAAAAATGTGATTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR CCA 90 bp | AGACCAAGCCAAGCAGGCCCCCAAAGTCAACCCCTTTACTTCACTTaGGGCAGACAGACCAAAGCAGCACTGTCTTCTGATGAGAAGGTA | + |
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Preference number: 1 (lower is better) Translates to: RPSQAGPQSQPLYFT*GRQTKAALSSDEKV Trigger: TACCTTCTCATCAGAAGACAGTGCTGCTTTGGTCTGTCTGCCCCAAGTGAAGTAAAGGGGTTGACTTTGGGGGCCTGCTTGGCTTGGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR CCA 90 bp | AATACAGCTAAAGCCCTCGGCACTCCCAGTAAGGATTTCTGGCTTTaGCCCTTACTGTGGACTGAGCAAACTGCCAATGGCCTCTCACCA | + |
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Preference number: 1 (lower is better) Translates to: NTAKALGTPSKDFWL*PLLWTEQTANGLSP Trigger: TGGTGAGAGGCCATTGGCAGTTTGCTCAGTCCACAGTAAGGGCCAAAGCCAGAAATCCTTACTGGGAGTGCCGAGGGCTTTAGCTGTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR TCA 90 bp | AAAGCGTGGCTGAAAGATTGGCAACCCTCTAATAAAGGACTGGTCTaGACAGCTCAGCACCAAGCTTCCGGTGGAAACTCGGGACTGTAT | + |
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Preference number: 1 (lower is better) Translates to: KAWLKDWQPSNKGLV*TAQHQASGGNSGLY Trigger: ATACAGTCCCGAGTTTCCACCGGAAGCTTGGTGCTGAGCTGTTCAGACCAGTCCTTTATTAGAGGGTTGCCAATCTTTCAGCCACGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR CCA 90 bp | ATGTATAATACAGCTAAAGCCCTCGGCACTCCCAGTAAGGATTTCTaGCTTTGGCCCTTACTGTGGACTGAGCAAACTGCCAATGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: MYNTAKALGTPSKDF*LWPLLWTEQTANGL Trigger: GAGGCCATTGGCAGTTTGCTCAGTCCACAGTAAGGGCCAAAGCCAGAAATCCTTACTGGGAGTGCCGAGGGCTTTAGCTGTATTATACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR TCA 90 bp | CTGCTCTCTGAGATAGGACCAAACCTTCCCTGGCCATCAAATACCTaGCACAGTAATGTTTCCTGCTTTGCAAACCTTCGTGAGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: LLSEIGPNLPWPSNT*HSNVSCFANLREAG Trigger: TCCTGCCTCACGAAGGTTTGCAAAGCAGGAAACATTACTGTGTCAGGTATTTGATGGCCAGGGAAGGTTTGGTCCTATCTCAGAGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR TCA 90 bp | AGCACCAAGCTTCCGGTGGAAACTCGGGACTGTATTAGCTTTGGTTaGAGCTCATTTCCGGATGCCAAGCAGCTACAGATATCTACGCAT | + |
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Preference number: 1 (lower is better) Translates to: STKLPVETRDCISFG*SSFPDAKQLQISTH Trigger: ATGCGTAGATATCTGTAGCTGCTTGGCATCCGGAAATGAGCTTCAACCAAAGCTAATACAGTCCCGAGTTTCCACCGGAAGCTTGGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR TCA 90 bp | AGATACAAAAGCAAACAAGATACTCTCCATGCCACCGCTGCTCTCTaGGATAGGACCAAACCTTCCCTGGCCATCAAATACCTGACACAG | + |
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Preference number: 1 (lower is better) Translates to: RYKSKQDTLHATAAL*DRTKPSLAIKYLTQ Trigger: CTGTGTCAGGTATTTGATGGCCAGGGAAGGTTTGGTCCTATCTCAGAGAGCAGCGGTGGCATGGAGAGTATCTTGTTTGCTTTTGTATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR TCA 90 bp | TTCAATGGCTCACCCAATAGCTGGTATATTTCCCATGGCCAGAAATaGATGGGCAGAGGTATAAACAGGAGGCTGGCCTTGGTCAAATCA | + |
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Preference number: 1 (lower is better) Translates to: FNGSPNSWYISHGQK*MGRGINRRLALVKS Trigger: TGATTTGACCAAGGCCAGCCTCCTGTTTATACCTCTGCCCATTCATTTCTGGCCATGGGAAATATACCAGCTATTGGGTGAGCCATTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR GCA 90 bp | GAATCTTCACAGTCTAGAAAATGCCATTGCGATTTCCTTCTGGCTTaGCTTTCTGTGGCTTCAAAGGCAAAGCCCCTTAGGTCACACTTC | + |
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Preference number: 1 (lower is better) Translates to: ESSQSRKCHCDFLLA*LSVASKAKPLRSHF Trigger: GAAGTGTGACCTAAGGGGCTTTGCCTTTGAAGCCACAGAAAGGCAAGCCAGAAGGAAATCGCAATGGCATTTTCTAGACTGTGAAGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR CCA 90 bp | AGTCTAGAAAATGCCATTGCGATTTCCTTCTGGCTTGCCTTTCTGTaGCTTCAAAGGCAAAGCCCCTTAGGTCACACTTCATTTCCCATC | + |
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Preference number: 1 (lower is better) Translates to: SLENAIAISFWLAFL*LQRQSPLGHTSFPI Trigger: GATGGGAAATGAAGTGTGACCTAAGGGGCTTTGCCTTTGAAGCCACAGAAAGGCAAGCCAGAAGGAAATCGCAATGGCATTTTCTAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR TCA 90 bp | TACTTAGGAAGGAGAATGTGGCCAGCATATGGATGGGGAGTAGCTTaGAACTGTGAATCACATTTTTCCAAGAGCTGCTCTCCTTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: YLGRRMWPAYGWGVA*NCESHFSKSCSPWN Trigger: GTTCCAAGGAGAGCAGCTCTTGGAAAAATGTGATTCACAGTTTCAAGCTACTCCCCATCCATATGCTGGCCACATTCTCCTTCCTAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR TCA 90 bp | AAGTGGAAGGTAAGAAAGAGAACGAGGGACAAGGACCATATATTTTaGGGTACCCTCTACTTGACGGCAACGCTGAACACTACCACTTTG | + |
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Preference number: 1 (lower is better) Translates to: KWKVRKRTRDKDHIF*GTLYLTATLNTTTL Trigger: CAAAGTGGTAGTGTTCAGCGTTGCCGTCAAGTAGAGGGTACCTCAAAATATATGGTCCTTGTCCCTCGTTCTCTTTCTTACCTTCCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR GCA 90 bp | CTCTGCATTTTAGTTAGGTTTCTAAGGATGGCACCTCAAGGTAATTaGAGTTGCCTAACCCGTTCCAGTTCCTTCCATACACGTGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: LCILVRFLRMAPQGN*SCLTRSSSFHTRGS Trigger: ACTTCCACGTGTATGGAAGGAACTGGAACGGGTTAGGCAACTGCAATTACCTTGAGGTGCCATCCTTAGAAACCTAACTAAAATGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR TCA 90 bp | CAAATCAATAAGAGTCATTATCATGACATCAGAGTCACCCTCTGGTaGCATGACCAAGATGCTGTCAGGCCCAATTCCTTTCTGGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: QINKSHYHDIRVTLW*HDQDAVRPNSFLAC Trigger: ACAAGCCAGAAAGGAATTGGGCCTGACAGCATCTTGGTCATGTCACCAGAGGGTGACTCTGATGTCATGATAATGACTCTTATTGATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR GCA 90 bp | GAGGTATCAAAGGGATGTTGTCAAATTATTTGGAGGGCCTACTGGTaGTTAGCATCTAGAAAGTATCCGTTCGCACAGTGTTATCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: EVSKGCCQIIWRAYW*LASRKYPFAQCYLS Trigger: ACTCAGATAACACTGTGCGAACGGATACTTTCTAGATGCTAAGCACCAGTAGGCCCTCCAAATAATTTGACAACATCCCTTTGATACCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR CCA 90 bp | AGTGAGGTATCAAAGGGATGTTGTCAAATTATTTGGAGGGCCTACTaGTGCTTAGCATCTAGAAAGTATCCGTTCGCACAGTGTTATCTG | + |
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Preference number: 1 (lower is better) Translates to: SEVSKGCCQIIWRAY*CLASRKYPFAQCYL Trigger: CAGATAACACTGTGCGAACGGATACTTTCTAGATGCTAAGCACCAGTAGGCCCTCCAAATAATTTGACAACATCCCTTTGATACCTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR TCA 90 bp | TGGACGATCCCATTAACCCTTCTGCTAATGTCCATTCCATTGCCTTaGACTAGATTGGTTCCATTTCTTAACACTTTGCATAGCACTTAC | + |
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Preference number: 1 (lower is better) Translates to: WTIPLTLLLMSIPLP*TRLVPFLNTLHSTY Trigger: GTAAGTGCTATGCAAAGTGTTAAGAAATGGAACCAATCTAGTTCAAGGCAATGGAATGGACATTAGCAGAAGGGTTAATGGGATCGTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR CCA 90 bp | ATATTTCTAAGGAGTGAGGTATCAAAGGGATGTTGTCAAATTATTTaGAGGGCCTACTGGTGCTTAGCATCTAGAAAGTATCCGTTCGCA | + |
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Preference number: 1 (lower is better) Translates to: IFLRSEVSKGCCQII*RAYWCLASRKYPFA Trigger: TGCGAACGGATACTTTCTAGATGCTAAGCACCAGTAGGCCCTCCAAATAATTTGACAACATCCCTTTGATACCTCACTCCTTAGAAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR GCA 90 bp | CCATTCCATTGCCTTGAACTAGATTGGTTCCATTTCTTAACACTTTaGATAGCACTTACTTGTCAAAAGTGCTTTCCATTCATTGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: PFHCLELDWFHFLTL*IALTCQKCFPFIVS Trigger: TGAGACAATGAATGGAAAGCACTTTTGACAAGTAAGTGCTATGCAAAGTGTTAAGAAATGGAACCAATCTAGTTCAAGGCAATGGAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR TCA 90 bp | AGGATTCCTGAGAAACTAAGATTAATGAATGATATTTCTAAGGAGTaGGGTATCAAAGGGATGTTGTCAAATTATTTGGAGGGCCTACTG | + |
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Preference number: 1 (lower is better) Translates to: RIPEKLRLMNDISKE*GIKGMLSNYLEGLL Trigger: CAGTAGGCCCTCCAAATAATTTGACAACATCCCTTTGATACCTCACTCCTTAGAAATATCATTCATTAATCTTAGTTTCTCAGGAATCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGCCCTTACTGTGGACTGAGCAAACTGCCAATGGCCTCTCACCAGCTGGGATAGTCTCACTGCCATaGGCATCTGAGAGGGAAACG | + |
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Preference number: 2 (lower is better) Translates to: LWPLLWTEQTANGLSPAGIVSLP*ASERET Trigger: CGTTTCCCTCTCAGATGCCCATGGCAGTGAGACTAT...CCCAGCTGGTGAGAGGCCATTGGCAGTTTGCTCAGTCCACAGTAAGGGCCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR CCA 90 bp | GGCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCTGGCTTGCCTTTCTGTaGCTTCAAAGGCAAAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: GNDRKEPPLPQDKSHCVSWLAFL*LQRQSP Trigger: GGGGCTTTGCCTTTGAAGCCACAGAAAGGCAAGCCA...GGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR CCA 90 bp | GGCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCGGTACACTGAGTTGCTaGGGAGGAGTGGGTTATTCA | + |
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Preference number: 2 (lower is better) Translates to: GNDRKEPPLPQDKSHCVSGTLSC*GGVGYS Trigger: TGAATAACCCACTCCTCCCCAGCAACTCAGTGTACC...GGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGCCCTTACTGTGGACTGAGCAAACTGCCAATGGCCTCTCACCAGCTGGGGGTCATGCAGTGGCATaGAAAGAACAAGACAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LWPLLWTEQTANGLSPAGGHAVA*KEQDRK Trigger: CTTTCTGTCTTGTTCTTTCCATGCCACTGCATGACC...CCCAGCTGGTGAGAGGCCATTGGCAGTTTGCTCAGTCCACAGTAAGGGCCAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGCCCTTACTGTGGACTGAGCAAACTGCCAATGGCCTCTCACCAGCTGGGCAATTGAGCTCACTATaGAATCTCTCTCAGCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LWPLLWTEQTANGLSPAGQLSSL*NLSQLH Trigger: ATGAAGCTGAGAGAGATTGCATAGTGAGCTCAATTG...CCCAGCTGGTGAGAGGCCATTGGCAGTTTGCTCAGTCCACAGTAAGGGCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR CAA 90 bp | AGCTCAGCACCAAGCTTCCGGTGGAAACTCGGGACTGTATTAGCTTaGGTTGAAGCTCATTTCCGGATGCCAAGCAGCTACAGATATCTA | + |
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Preference number: 2 (lower is better) Translates to: SSAPSFRWKLGTVLA*VEAHFRMPSSYRYL Trigger: TAGATATCTGTAGCTGCTTGGCATCCGGAAATGAGCTTCAACCAAAGCTAATACAGTCCCGAGTTTCCACCGGAAGCTTGGTGCTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR GCA 90 bp | GCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCAAAAGAGTGGTTGGAATaGTGGTGGTGGCTTGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: AMTGKSPLYLKTRATVCPKEWLE*WWWLVN Trigger: ATTCACAAGCCACCACCAGCATTCCAACCACTCTTT...TGGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGCCCTTACTGTGGACTGAGCAAACTGCCAATGGCCTCTCACCAGCTGGGTTCACCATCCAAATATaGGAAATGTGTTTTGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: LWPLLWTEQTANGLSPAGFTIQI*EMCFGY Trigger: GTACCCAAAACACATTTCCCATATTTGGATGGTGAA...CCCAGCTGGTGAGAGGCCATTGGCAGTTTGCTCAGTCCACAGTAAGGGCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAGCACCAAGCTTCCGGTGGAAACTCGGGACTGTATTAGCTTTGGTTGAAGAGCATCTGTGGAAGTaGCATCTGGGTATGAGATTG | + |
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Preference number: 2 (lower is better) Translates to: SSAPSFRWKLGTVLALVEEHLWK*HLGMRL Trigger: CAATCTCATACCCAGATGCCACTTCCACAGATGCTC...TTCAACCAAAGCTAATACAGTCCCGAGTTTCCACCGGAAGCTTGGTGCTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR CAA 90 bp | ACACAGGTTCTCCTCAAGAAGCCAAACATTAGTCAGGGCATTCATTaGACAAGTGTGCACACGCAGGCCAAAGACCCTTTGGTAGCAACT | + |
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Preference number: 2 (lower is better) Translates to: TQVLLKKPNISQGIH*TSVHTQAKDPLVAT Trigger: AGTTGCTACCAAAGGGTCTTTGGCCTGCGTGTGCACACTTGTCAAATGAATGCCCTGACTAATGTTTGGCTTCTTGAGGAGAACCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR GCA 90 bp | ATCCAGTATTTTACCCTTGAGGTATGTAGTCATTTGAGGCTACTGACAGACTTCTTATTCACCGGCATGTaGCAGGGGCTGCTGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: IQYFTLEVCSHLRLLTDFLFTGM*QGLLSL Trigger: CAGGCTCAGCAGCCCCTGGCACATGCCGGTGAATAA...GAAGTCTGTCAGTAGCCTCAAATGACTACATACCTCAAGGGTAAAATACTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAGCACCAAGCTTCCGGTGGAAACTCGGGACTGTATTAGCTTTGGTTGAAAACAAAAAGGCTGTGTaGGTGTCACCTCTAGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: SSAPSFRWKLGTVLALVENKKAV*VSPLVQ Trigger: TTGGACTAGAGGTGACACCCACACAGCCTTTTTGTT...TTCAACCAAAGCTAATACAGTCCCGAGTTTCCACCGGAAGCTTGGTGCTGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR CAA 90 bp | AAAGTAGCCTTTCTTCGGCCAAGGAGAAAGCTCTGTAACTTAACTTaGTGCACTTCAAAAGACCAAGCCAAGCAGGCCCCCAAAGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: KVAFLRPRRKLCNLT*CTSKDQAKQAPKVN Trigger: GTTGACTTTGGGGGCCTGCTTGGCTTGGTCTTTTGAAGTGCACAAAGTTAAGTTACAGAGCTTTCTCCTTGGCCGAAGAAAGGCTACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTCAGGCCCAATTCCTTTCTGGCTTGTACCTGGATAGCAGCATAGCTTCAAACCCACAGGAACTTTaGCAAGACAGGAACTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: CCQAQFLSGLYLDSSIASNPQEL*QDRNFD Trigger: ATCAAAGTTCCTGTCTTGTCAAAGTTCCTGTGGGTT...TGAAGCTATGCTGCTATCCAGGTACAAGCCAGAAAGGAATTGGGCCTGACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR TCA 90 bp | GGCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCTCGCACAGTGTTATCTaGGTTCTTAGATTTATTCTC | + |
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Preference number: 2 (lower is better) Translates to: GNDRKEPPLPQDKSHCVSSHSVI*VLRFIL Trigger: GAGAATAAATCTAAGAACTCAGATAACACTGTGCGA...GGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR TCA 90 bp | GCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCAAGCTGCAAGGATTCCTaGGAAACTAAGATTAATGAA | + |
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Preference number: 2 (lower is better) Translates to: AMTGKSPLYLKTRATVCPSCKDS*ETKINE Trigger: TTCATTAATCTTAGTTTCTCAGGAATCCTTGCAGCT...TGGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR GCA 90 bp | GCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCAGTGATTTTTCTAAACTaGCACAGATGTGGTAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: AMTGKSPLYLKTRATVCPVIFLN*HRCGRK Trigger: TTTCCTACCACATCTGTGGCAGTTTAGAAAAATCAC...TGGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGTACCTGGATAGCAGCATAGCTTCAAAAGACAACTTTAGAGAATACAATTGGCCTCTCACCAGCTaGGGAGGTTCCATTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: GLYLDSSIASKDNFREYNWPLTS*GGSILC Trigger: ACAGAGAATGGAACCTCCCCAGCTGGTGAGAGGCCA...ATTGTATTCTCTAAAGTTGTCTTTTGAAGCTATGCTGCTATCCAGGTACAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGTACCTGGATAGCAGCATAGCTTCAAAAGACAACTTTAGAGAATACAATGGAATGGAATGGCAATaGCAGGAAAGAGCCCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: GLYLDSSIASKDNFREYNGMEWQ*QERAPF Trigger: AAAGGGGGCTCTTTCCTGTCATTGCCATTCCATTCC...ATTGTATTCTCTAAAGTTGTCTTTTGAAGCTATGCTGCTATCCAGGTACAAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGTACCTGGATAGCAGCATAGCTTCAAAAGACAACTTTAGAGAATACAATAAGCAGGAGCATCTGTaGAAGTGGCATCTGGGTATG | + |
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Preference number: 2 (lower is better) Translates to: GLYLDSSIASKDNFREYNKQEHL*KWHLGM Trigger: CATACCCAGATGCCACTTCCACAGATGCTCCTGCTT...ATTGTATTCTCTAAAGTTGTCTTTTGAAGCTATGCTGCTATCCAGGTACAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR GCA 90 bp | GAAGGAAGGAAGGTCCATATATCACATCCTTCTTGGAGGATTTGGCAAAATCCTAGAACATTGCCCAGATaGAGTTACTTAGGAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: EGRKVHISHPSWRIWQNPRTLPR*SYLGRR Trigger: TCTCCTTCCTAAGTAACTGCATCTGGGCAATGTTCT...AGGATTTTGCCAAATCCTCCAAGAAGGATGTGATATATGGACCTTCCTTCCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGTACCTGGATAGCAGCATAGCTTCAAAAGACAACTTTAGAGAATACAATAAGAGGATTCTGTGCTaGGAAGAGAGGCAAACAGAA | + |
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Preference number: 2 (lower is better) Translates to: GLYLDSSIASKDNFREYNKRILC*EERQTE Trigger: TTCTGTTTGCCTCTCTTCTCAGCACAGAATCCTCTT...ATTGTATTCTCTAAAGTTGTCTTTTGAAGCTATGCTGCTATCCAGGTACAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGTACCTGGATAGCAGCATAGCTTCAAAAGACAACTTTAGAGAATACAATCAACAACTTTTAAAATaGGGTACACTGAGTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GLYLDSSIASKDNFREYNQQLLK*GTLSCW Trigger: CCAGCAACTCAGTGTACCTCATTTTAAAAGTTGTTG...ATTGTATTCTCTAAAGTTGTCTTTTGAAGCTATGCTGCTATCCAGGTACAAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| 3UTR CAA 90 bp | CAACACACTAATATGACTTCACCATCCAAATATGGGAAATGTGTTTaGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: QHTNMTSPSKYGKCV*GTQLIKYIHGPQCP Trigger: AGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCATATTAGTGTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTGTACCTGGATAGCAGCATAGCTTCAAAAGACAACTTTAGAGAATACAATACAAGACAGGAACTTTaGTCTCCACATAATACACTA | + |
|
Preference number: 2 (lower is better) Translates to: GLYLDSSIASKDNFREYNTRQEL*SPHNTL Trigger: TAGTGTATTATGTGGAGATCAAAGTTCCTGTCTTGT...ATTGTATTCTCTAAAGTTGTCTTTTGAAGCTATGCTGCTATCCAGGTACAAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CCA 72 bp | CCTCTCACCAGCTGGGGAGGTTCCATTCTCTGTTCTTaGGGGGTCATTGCGTCCCTACCCACCACAGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: PLTSWGGSILCS*GVIASLPTTVI Trigger: TATGACTGTGGTGGGTAGGGACGCAATGACCCCCCAAGAACAGAGAATGGAACCTCCCCAGCTGGTGAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR TCA 72 bp | CTCACCCAACAACATAGTCTCACTGCCATGGGCATCTaGGAGGGAAACGGAGGCATGGCAGTAGCAATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LTQQHSLTAMGI*EGNGGMAVAMG Trigger: CCCCATTGCTACTGCCATGCCTCCGTTTCCCTCTCAGATGCCCATGGCAGTGAGACTATGTTGTTGGGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR GCA 72 bp | AGCTTGCTTCATGCTCACAGGAACAATGGCCTGTTGTaGATACTCCACACCGAGTGGAGCACAGGCGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLLHAHRNNGLL*ILHTEWSTGVQ Trigger: CTGGACGCCTGTGCTCCACTCGGTGTGGAGTATGCACAACAGGCCATTGTTCCTGTGAGCATGAAGCAAGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CCA 72 bp | AAAGCCCTCGGCACTCCCAGTAAGGATTTCTGGCTTTaGCCCTTACTGTGGACTGAGCAAACTGCCAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: KALGTPSKDFWL*PLLWTEQTANG Trigger: GCCATTGGCAGTTTGCTCAGTCCACAGTAAGGGCCAAAGCCAGAAATCCTTACTGGGAGTGCCGAGGGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CCA 72 bp | ACAGCTAAAGCCCTCGGCACTCCCAGTAAGGATTTCTaGCTTTGGCCCTTACTGTGGACTGAGCAAACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TAKALGTPSKDF*LWPLLWTEQTA Trigger: GGCAGTTTGCTCAGTCCACAGTAAGGGCCAAAGCCAGAAATCCTTACTGGGAGTGCCGAGGGCTTTAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CCA 72 bp | ACTCCCAGTAAGGATTTCTGGCTTTGGCCCTTACTGTaGACTGAGCAAACTGCCAATGGCCTCTCACCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TPSKDFWLWPLL*TEQTANGLSPA Trigger: AGCTGGTGAGAGGCCATTGGCAGTTTGCTCAGTCCACAGTAAGGGCCAAAGCCAGAAATCCTTACTGGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR TCA 72 bp | ATTTTTCCAAGAGCTGCTCTCCTTGGAACAAATGGCTaGTCGGGAAGCAAAGGCCAGCAACTGCCAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IFPRAALLGTNG*SGSKGQQLPAL Trigger: CAGAGCTGGCAGTTGCTGGCCTTTGCTTCCCGATCAGCCATTTGTTCCAAGGAGAGCAGCTCTTGGAAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CCA 72 bp | AGGACTGGTCTGAACAGCTCAGCACCAAGCTTCCGGTaGAAACTCGGGACTGTATTAGCTTTGGTTGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RTGLNSSAPSFR*KLGTVLALVEA Trigger: AGCTTCAACCAAAGCTAATACAGTCCCGAGTTTCCACCGGAAGCTTGGTGCTGAGCTGTTCAGACCAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR TCA 72 bp | CTGAAAGATTGGCAACCCTCTAATAAAGGACTGGTCTaGACAGCTCAGCACCAAGCTTCCGGTGGAAACTCG | + |
|
Preference number: 3 (lower is better) Translates to: LKDWQPSNKGLV*TAQHQASGGNS Trigger: CGAGTTTCCACCGGAAGCTTGGTGCTGAGCTGTTCAGACCAGTCCTTTATTAGAGGGTTGCCAATCTTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR-3UTR CAA 90 bp | GCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCACCTAGCCACCGACTTTaGCTCAGAACTTATCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: AMTGKSPLYLKTRATVCPPSHRL*LRTYLH Trigger: ATGAAGATAAGTTCTGAGCAAAAGTCGGTGGCTAGG...TGGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCAGCACCAAGCTTCCGGTGGAAACTCGGGACTGTATTAGCTTTGGTTGAAAACAGGAGGCTGGCCTaGGTCAAATCAATAAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSAPSFRWKLGTVLALVENRRLA*VKSIRV Trigger: GACTCTTATTGATTTGACCAAGGCCAGCCTCCTGTT...TTCAACCAAAGCTAATACAGTCCCGAGTTTCCACCGGAAGCTTGGTGCTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR TCA 72 bp | TCCTCAAGAAGCCAAACATTAGTCAGGGCATTCATTTaGCAAGTGTGCACACGCAGGCCAAAGACCCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSRSQTLVRAFI*QVCTRRPKTLW Trigger: CCAAAGGGTCTTTGGCCTGCGTGTGCACACTTGTCAAATGAATGCCCTGACTAATGTTTGGCTTCTTGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR TCA 72 bp | TCACCCAATAGCTGGTATATTTCCCATGGCCAGAAATaGATGGGCAGAGGTATAAACAGGAGGCTGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SPNSWYISHGQK*MGRGINRRLAL Trigger: CAAGGCCAGCCTCCTGTTTATACCTCTGCCCATTCATTTCTGGCCATGGGAAATATACCAGCTATTGGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR GCA 72 bp | CCAGTTCCTTCCATACACGTGGAAGTATCTCAAGCTTaGTTCATGCTCACAGGAACAATGGCCTGTTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PVPSIHVEVSQA*FMLTGTMACCA Trigger: TGCACAACAGGCCATTGTTCCTGTGAGCATGAAGCAAGCTTGAGATACTTCCACGTGTATGGAAGGAACTGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR GCA 72 bp | AGGAGCAAAGGAAGAGGCAGAGGCAAACTGTCCTTTTaGCTATCTGTACCATCACACAGGTTCTCCTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSKGRGRGKLSF*LSVPSHRFSSR Trigger: TCTTGAGGAGAACCTGTGTGATGGTACAGATAGGCAAAAGGACAGTTTGCCTCTGCCTCTTCCTTTGCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR TCA 72 bp | GTGGCCAGCATATGGATGGGGAGTAGCTTGAAACTGTaGATCACATTTTTCCAAGAGCTGCTCTCCTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VASIWMGSSLKL*ITFFQELLSLE Trigger: TTCCAAGGAGAGCAGCTCTTGGAAAAATGTGATTCACAGTTTCAAGCTACTCCCCATCCATATGCTGGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CCA 72 bp | TCTCCACATAATACACTAGGTGGTCATGCAGTGGCATaGAAAGAACAAGACAGAAAGCCATGGAGCCGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SPHNTLGGHAVA*KEQDRKPWSRD Trigger: ATCACGGCTCCATGGCTTTCTGTCTTGTTCTTTCCATGCCACTGCATGACCACCTAGTGTATTATGTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCAGCACCAAGCTTCCGGTGGAAACTCGGGACTGTATTAGCTTTGGTTGAATTAGTGCCAAAACAATaGGCCTGCTTTGCAGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSAPSFRWKLGTVLALVELVPKQ*ACFAVK Trigger: TTTAACTGCAAAGCAGGCCAATTGTTTTGGCACTAA...TTCAACCAAAGCTAATACAGTCCCGAGTTTCCACCGGAAGCTTGGTGCTGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR TCA 72 bp | AGGAGAATGTGGCCAGCATATGGATGGGGAGTAGCTTaGAACTGTGAATCACATTTTTCCAAGAGCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RRMWPAYGWGVA*NCESHFSKSCS Trigger: AGAGCAGCTCTTGGAAAAATGTGATTCACAGTTTCAAGCTACTCCCCATCCATATGCTGGCCACATTCTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR TCA 72 bp | GTAAGAAAGAGAACGAGGGACAAGGACCATATATTTTaGGGTACCCTCTACTTGACGGCAACGCTGAACACT | + |
|
Preference number: 3 (lower is better) Translates to: VRKRTRDKDHIF*GTLYLTATLNT Trigger: AGTGTTCAGCGTTGCCGTCAAGTAGAGGGTACCTCAAAATATATGGTCCTTGTCCCTCGTTCTCTTTCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR TCA 72 bp | AGCAGTAAGCCACAGTTTTGGATCAGGCTATGTCTATaGGCAGGTGAGAATAAAGGTACAAAAGCGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSKPQFWIRLCL*AGENKGTKAWL Trigger: CAGCCACGCTTTTGTACCTTTATTCTCACCTGCTCATAGACATAGCCTGATCCAAAACTGTGGCTTACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CCA 72 bp | TACCTTATGCTAATATGTATGGACTGGGGAACAGGATaGCTTTCTTCATACCATCAGGCACCACCCAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: YLMLICMDWGTG*LSSYHQAPPRQ Trigger: TTGTCTGGGTGGTGCCTGATGGTATGAAGAAAGCCATCCTGTTCCCCAGTCCATACATATTAGCATAAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CCA 72 bp | GAAGAAGGAAGGAAGGTCCATATATCACATCCTTCTTaGAGGATTTGGCAAAATCCTACCGACACCATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: EEGRKVHISHPS*RIWQNPTDTMG Trigger: TCCCATGGTGTCGGTAGGATTTTGCCAAATCCTCCAAGAAGGATGTGATATATGGACCTTCCTTCCTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CCA 72 bp | TCAAAGGGATGTTGTCAAATTATTTGGAGGGCCTACTaGTGCTTAGCATCTAGAAAGTATCCGTTCGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: SKGCCQIIWRAY*CLASRKYPFAQ Trigger: CTGTGCGAACGGATACTTTCTAGATGCTAAGCACCAGTAGGCCCTCCAAATAATTTGACAACATCCCTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CCA 72 bp | AGGAAGGTCCATATATCACATCCTTCTTGGAGGATTTaGCAAAATCCTACCGACACCATGGGAAAATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RKVHISHPSWRI*QNPTDTMGKSP Trigger: AGGAGATTTTCCCATGGTGTCGGTAGGATTTTGCCAAATCCTCCAAGAAGGATGTGATATATGGACCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAGTATTTTACCCTTGAGGTATGTAGTCATTTGAGGCTACTGACAGACTTCGGAAGTATCTCAAGCTaGCTTCATGCTCACAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: IQYFTLEVCSHLRLLTDFGSISS*LHAHRN Trigger: GTTCCTGTGAGCATGAAGCAAGCTTGAGATACTTCC...GAAGTCTGTCAGTAGCCTCAAATGACTACATACCTCAAGGGTAAAATACTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR TCA 72 bp | TATGAGCAGGTGAGAATAAAGGTACAAAAGCGTGGCTaGAAGATTGGCAACCCTCTAATAAAGGACTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: YEQVRIKVQKRG*KIGNPLIKDWS Trigger: AGACCAGTCCTTTATTAGAGGGTTGCCAATCTTTCAGCCACGCTTTTGTACCTTTATTCTCACCTGCTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTGTACCTGGATAGCAGCATAGCTTCAAAAGACAACTTTAGAGAATACAATCGATTTCCTTCTGGCTaGCCTTTCTGTGGCTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLYLDSSIASKDNFREYNRFPSG*PFCGFK Trigger: TTTGAAGCCACAGAAAGGCAAGCCAGAAGGAAATCG...ATTGTATTCTCTAAAGTTGTCTTTTGAAGCTATGCTGCTATCCAGGTACAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR TCA 72 bp | AAGCCATGGAGCCGTGATGATGATACCATGTACCTCTaGAGCCTCGTTTTCATTAAAATGCCAGAAGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: KPWSRDDDTMYL*SLVFIKMPEEY Trigger: ATATTCTTCTGGCATTTTAATGAAAACGAGGCTTCAGAGGTACATGGTATCATCATCACGGCTCCATGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR GCA 72 bp | TTTTCTTCCCTTGATCTCTTTAGAACATTGCCCAGATaGAGTTACTTAGGAAGGAGAATGTGGCCAGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: FSSLDLFRTLPR*SYLGRRMWPAY Trigger: ATATGCTGGCCACATTCTCCTTCCTAAGTAACTGCATCTGGGCAATGTTCTAAAGAGATCAAGGGAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR-3UTR CAA 90 bp | GCACTTACTTGTCAAAAGTGCTTTCCATTCATTGTCTCAGTTTATCCTCACAACAGGCAAACTGTCCTTTaGCCTATCTGTACCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: ALTCQKCFPFIVSVYPHNRQTVL*PICTIT Trigger: TGTGATGGTACAGATAGGCAAAAGGACAGTTTGCCT...GTTGTGAGGATAAACTGAGACAATGAATGGAAAGCACTTTTGACAAGTAAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR-3UTR CAA 90 bp | GCACTTACTTGTCAAAAGTGCTTTCCATTCATTGTCTCAGTTTATCCTCACAACCCCACCACAGTCATATaGAAACAACATGGTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ALTCQKCFPFIVSVYPHNPTTVI*KQHGQN Trigger: GTTCTGACCATGTTGTTTCAATATGACTGTGGTGGG...GTTGTGAGGATAAACTGAGACAATGAATGGAAAGCACTTTTGACAAGTAAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR-3UTR CAA 90 bp | GCACTTACTTGTCAAAAGTGCTTTCCATTCATTGTCTCAGTTTATCCTCACAACCAACCCCAGAGGAGGTaGCAAACATTAAGGTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ALTCQKCFPFIVSVYPHNQPQRR*QTLRFL Trigger: TAAAAACCTTAATGTTTGCAACCTCCTCTGGGGTTG...GTTGTGAGGATAAACTGAGACAATGAATGGAAAGCACTTTTGACAAGTAAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAGTATTTTACCCTTGAGGTATGTAGTCATTTGAGGCTACTGACAGACTTCCTCTGTAACTTAACTTaGTGCACTTCAAAAGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: IQYFTLEVCSHLRLLTDFLCNLT*CTSKDQ Trigger: TTGGTCTTTTGAAGTGCACAAAGTTAAGTTACAGAG...GAAGTCTGTCAGTAGCCTCAAATGACTACATACCTCAAGGGTAAAATACTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR-3UTR CAA 90 bp | TATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAATGGTCCGCAATGTCCTaGTTTTATATCCACAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: YDFTIQIWEMCFGYPVNKWSAMS*FYIHNK Trigger: CTTGTTGTGGATATAAAACAAGGACATTGCGGACCA...TTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| 3UTR GCA 72 bp | TGCCTTGAACTAGATTGGTTCCATTTCTTAACACTTTaGATAGCACTTACTTGTCAAAAGTGCTTTCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: CLELDWFHFLTL*IALTCQKCFPF Trigger: GAATGGAAAGCACTTTTGACAAGTAAGTGCTATGCAAAGTGTTAAGAAATGGAACCAATCTAGTTCAAGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CCA 72 bp | ACCATGAGTTTCCTGCAGGCTATTTGTCAGAATAGTTaGAATTTTTCTTGCATAGTTTTCAGTGATTGCATA | + |
|
Preference number: 3 (lower is better) Translates to: TMSFLQAICQNS*NFSCIVFSDCI Trigger: TATGCAATCACTGAAAACTATGCAAGAAAAATTCCAACTATTCTGACAAATAGCCTGCAGGAAACTCATGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR GCA 90 bp | AGCTCAGCACCAAGCTTCCGGTGGAAACTCGGGACTGTATTAGCTTTGGTTGAACCAGGGGGCCCTCCTTaGCCAGGCTCAAGCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSAPSFRWKLGTVLALVEPGGPP*PGSSQM Trigger: CATCTGGCTTGAGCCTGGGCAAGGAGGGCCCCCTGG...TTCAACCAAAGCTAATACAGTCCCGAGTTTCCACCGGAAGCTTGGTGCTGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR CCA 90 bp | GCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCATGTGTAACCAGGCACTaGCGCAGGCCCAGCTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AMTGKSPLYLKTRATVCPCVTRH*RRPSLR Trigger: CCGCAAGCTGGGCCTGCGCCAGTGCCTGGTTACACA...TGGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR CCA 90 bp | GTGCATACTCCACACCGAGTGGAGCACAGGCGTCCAGTTATTTTAGTACTGGTGGAGCCAGCTGCCACATaGCACTGTAGATGCCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: VHTPHRVEHRRPVILVLVEPAAT*HCRCPR Trigger: GCGTGGGCATCTACAGTGCCATGTGGCAGCTGGCTC...CACCAGTACTAAAATAACTGGACGCCTGTGCTCCACTCGGTGTGGAGTATGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR CCA 90 bp | GGCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCCATAATCACAGAGCTTaGAGGAGTCCAGGAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GNDRKEPPLPQDKSHCVSHNHRA*RSPGGR Trigger: GCGGCCTCCTGGACTCCTCCAAGCTCTGTGATTATG...GGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR GCA 90 bp | TGTTCTTATTCCAGAAGCCTGAAGCAGGAGCATCTGTGGAAGTGGCATCTGGGTACGAGCTCAAAGAGATaGCACGGGGTGTGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSYSRSLKQEHLWKWHLGTSSKR*HGVWNS Trigger: GGAGTTCCACACCCCGTGGCATCTCTTTGAGCTCGT...ACCCAGATGCCACTTCCACAGATGCTCCTGCTTCAGGCTTCTGGAATAAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR GCA 90 bp | GGCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCTGTGGGCATCATAAATaGCCTCTCGCCCAAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNDRKEPPLPQDKSHCVSCGHHK*PLAQEH Trigger: ATGCTCTTGGGCGAGAGGGCATTTATGATGCCCACA...GGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR GCA 90 bp | TCTTGTTTACTCTTTCGTGAACCCTTCCTAATGCAGTATCACAGAAGCCTAACTCCAGGGGGCCCTCCTTaGCCAGGCTCAAGCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SCLLFREPFLMQYHRSLTPGGPP*PGSSQM Trigger: CATCTGGCTTGAGCCTGGGCAAGGAGGGCCCCCTGG...AGTTAGGCTTCTGTGATACTGCATTAGGAAGGGTTCACGAAAGAGTAAACAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | CTTTGGCCCTTACTGTGGACTGAGCAAACTGCCAATGGCCTCTCACCAGCTGGGATCAGGGTCTTGGTTTaGCATCTGTGCTATATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWPLLWTEQTANGLSPAGIRVLV*HLCYML Trigger: AAGCATATAGCACAGATGGCAAACCAAGACCCTGAT...CCCAGCTGGTGAGAGGCCATTGGCAGTTTGCTCAGTCCACAGTAAGGGCCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR CCA 90 bp | GTGCATACTCCACACCGAGTGGAGCACAGGCGTCCAGTTATTTTAGTACTGGTGACTTGCCCAACTGTGTaGTTTTACGCTTCCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: VHTPHRVEHRRPVILVLVTCPTV*FYASDT Trigger: GGTGTCGGAAGCGTAAAACCACACAGTTGGGCAAGT...CACCAGTACTAAAATAACTGGACGCCTGTGCTCCACTCGGTGTGGAGTATGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR CCA 90 bp | TACTCCACACCGAGTGGAGCACAGGCGTCCAGTTATTTTAGTACTGGTGGTCTTGGTGTATGGAGGCATTaGAGGCGAATGCTCCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YSTPSGAQASSYFSTGGLGVWRH*RRMLRE Trigger: TTCACGGAGCATTCGCCTCCAATGCCTCCATACACC...AAGACCACCAGTACTAAAATAACTGGACGCCTGTGCTCCACTCGGTGTGGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR GCA 90 bp | CTTTGGCCCTTACTGTGGACTGAGCAAACTGCCAATGGCCTCTCACCAGCTGGGTGTTCAAAGGTAACATaGTCAGAATTCCAGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LWPLLWTEQTANGLSPAGCSKVT*SEFQQQ Trigger: CTGTTGCTGGAATTCTGAGCATGTTACCTTTGAACA...CCCAGCTGGTGAGAGGCCATTGGCAGTTTGCTCAGTCCACAGTAAGGGCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR CCA 90 bp | GCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCAGTATTGATGATGAGCTaGGCCCAGCTATTCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AMTGKSPLYLKTRATVCPVLMMS*AQLFHS Trigger: AGAGTGGAATAGCTGGGCCCAGCTCATCATCAATAC...TGGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CAA 72 bp | GAGGAGCAAAGGAAGAGGCAGAGGCAAACTGTCCTTTaGCCTATCTGTACCATCACACAGGTTCTCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EEQRKRQRQTVL*PICTITQVLLK Trigger: CTTGAGGAGAACCTGTGTGATGGTACAGATAGGCAAAAGGACAGTTTGCCTCTGCCTCTTCCTTTGCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR TCA 90 bp | GTGCATACTCCACACCGAGTGGAGCACAGGCGTCCAGTTATTTTAGTACTGGTGAAGGTGCAAATGCCTTaGCAAGAGATACAGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHTPHRVEHRRPVILVLVKVQMP*QEIQQG Trigger: TCCTTGCTGTATCTCTTGTCAAGGCATTTGCACCTT...CACCAGTACTAAAATAACTGGACGCCTGTGCTCCACTCGGTGTGGAGTATGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CAA 72 bp | CTCCTCAAGAAGCCAAACATTAGTCAGGGCATTCATTaGACAAGTGTGCACACGCAGGCCAAAGACCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLKKPNISQGIH*TSVHTQAKDPL Trigger: CAAAGGGTCTTTGGCCTGCGTGTGCACACTTGTCAAATGAATGCCCTGACTAATGTTTGGCTTCTTGAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR TCA 90 bp | CTATTCTGTGGACTACATCAGCTCTCCTCTGCAGCTGGGCTAAGCCAGGACACTCCCAATCAATTGTGTTaGAATCATCATAGGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LFCGLHQLSSAAGLSQDTPNQLC*NHHRSL Trigger: TAGGGACCTATGATGATTTCAACACAATTGATTGGG...AGTGTCCTGGCTTAGCCCAGCTGCAGAGGAGAGCTGATGTAGTCCACAGAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR TCA 90 bp | TACTCCACACCGAGTGGAGCACAGGCGTCCAGTTATTTTAGTACTGGTGGTCTTATACAATCAGCTCCCTaGCTACACCAGCTATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSTPSGAQASSYFSTGGLIQSAP*LHQLLK Trigger: CTTCAATAGCTGGTGTAGTCAGGGAGCTGATTGTAT...AAGACCACCAGTACTAAAATAACTGGACGCCTGTGCTCCACTCGGTGTGGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR CCA 90 bp | GGGAAATGTGTTTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTGAGCCAGCTGCCACATaGCACTGTAGATGCCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: GKCVLGTQLIKYIHGPQCEPAAT*HCRCPR Trigger: GCGTGGGCATCTACAGTGCCATGTGGCAGCTGGCTC...ACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAACACATTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | GGCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCCCGAGCATTTTCAATTaGAATAATGAGATCTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GNDRKEPPLPQDKSHCVSPSIFN*NNEISS Trigger: CGAAGAGATCTCATTATTTCAATTGAAAATGCTCGG...GGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR GCA 90 bp | TGTTCTTATTCCAGAAGCCTGAAGCAGGAGCATCTGTGGAAGTGGCATCTGGGTGAATTCCAGCAACAGTaGTCATGGTTAAACCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSYSRSLKQEHLWKWHLGEFQQQ*SWLNQN Trigger: GTTCTGGTTTAACCATGAGCACTGTTGCTGGAATTC...ACCCAGATGCCACTTCCACAGATGCTCCTGCTTCAGGCTTCTGGAATAAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR GCA 90 bp | TCTTGTTTACTCTTTCGTGAACCCTTCCTAATGCAGTATCACAGAAGCCTAACTACGAGCTCAAAGAGATaGCACGGGGTGTGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCLLFREPFLMQYHRSLTTSSKR*HGVWNS Trigger: GGAGTTCCACACCCCGTGGCATCTCTTTGAGCTCGT...AGTTAGGCTTCTGTGATACTGCATTAGGAAGGGTTCACGAAAGAGTAAACAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAGTATTTTACCCTTGAGGTATGTAGTCATTTGAGGCTACTGACAGACTTCACATGGCACTGTAGATaGCCACGCCAGCAGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IQYFTLEVCSHLRLLTDFTWHCR*PRQQVC Trigger: ACAGACCTGCTGGCGTGGGCATCTACAGTGCCATGT...GAAGTCTGTCAGTAGCCTCAAATGACTACATACCTCAAGGGTAAAATACTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR GCA 90 bp | GCAATGACAGGAAAGAGCCCCCTTTACCTCAAGACAAGAGCCACTGTGTGTCCACTTCATCACATCCATTaGCAGAGTCTTATGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AMTGKSPLYLKTRATVCPLHHIH*QSLMSK Trigger: TTTGCTCATAAGACTCTGGCAATGGATGTGATGAAG...TGGACACACAGTGGCTCTTGTCTTGAGGTAAAGGGGGCTCTTTCCTGTCATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR CCA 90 bp | GACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAATATGTGTAACCAGGCACTaGCGCAGGCCCAGCTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DFTIQIWEMCFGYPVNKICVTRH*RRPSLR Trigger: CCGCAAGCTGGGCCTGCGCCAGTGCCTGGTTACACA...TATTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| 3UTR CAA 72 bp | GGAAGAAGGAAGGAAGGTCCATATATCACATCCTTCTaGGAGGATTTGGCAAAATCCTACCGACACCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRRKEGPYITSF*EDLAKSYRHHG Trigger: CCCATGGTGTCGGTAGGATTTTGCCAAATCCTCCAAGAAGGATGTGATATATGGACCTTCCTTCCTTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR TCA 90 bp | AATATATCCATGGTCCGCAATGTCCTTGTTTTATATCCACAACAAGCCCATGATCAGGCTCAAGCCAGATaGCACCGCCAACACCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NISMVRNVLVLYPQQAHDQAQAR*HRQHQS Trigger: ACTTTGGTGTTGGCGGTGTCATCTGGCTTGAGCCTG...ATCATGGGCTTGTTGTGGATATAAAACAAGGACATTGCGGACCATGGATATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGTTTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGACATGGCACTGTAGATaGCCACGCCAGCAGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MCFGYPVNKIYPWSAMSLTWHCR*PRQQVC Trigger: ACAGACCTGCTGGCGTGGGCATCTACAGTGCCATGT...CAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGTTTACTCTTTCGTGAACCCTTCCTAATGCAGTATCACAGAAGCCTAACTGGTGTATGGAGGCATTaGAGGCGAATGCTCCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCLLFREPFLMQYHRSLTGVWRH*RRMLRE Trigger: TTCACGGAGCATTCGCCTCCAATGCCTCCATACACC...AGTTAGGCTTCTGTGATACTGCATTAGGAAGGGTTCACGAAAGAGTAAACAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| 3UTR CAA 72 bp | CAGATGGGAACACTGAGGCACAGAGCGGTTAAGATCTaGAGGCTAGTTAGTAGAAGCATAGGGAATACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QMGTLRHRAVKI*RLVSRSIGNTN Trigger: GTTTGTATTCCCTATGCTTCTACTAACTAGCCTCAAGATCTTAACCGCTCTGTGCCTCAGTGTTCCCATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR CCA 90 bp | AATATATCCATGGTCCGCAATGTCCTTGTTTTATATCCACAACAAGCCCATGATCCCTACACCAGGGATTaGCTCCTCCAAGAAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NISMVRNVLVLYPQQAHDPYTRD*LLQEVH Trigger: ATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGG...ATCATGGGCTTGTTGTGGATATAAAACAAGGACATTGCGGACCATGGATATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAGGAAGGTCCATATATCACATCCTTCTTGGAGGATTTGGCAAAATCCTAGACCTCTCTCCGCTTaGCTTCATTCTTCCGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: EGRKVHISHPSWRIWQNPRPLSA*LHSSGI Trigger: AATACCGGAAGAATGAAGCCAAGCGGAGAGAGGTCT...AGGATTTTGCCAAATCCTCCAAGAAGGATGTGATATATGGACCTTCCTTCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CAA 72 bp | CCTACCGACACCATGGGAAAATCTCCTTTTCTTCCCTaGATCTCTTTAGAACATTGCCCAGATGCAGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: PTDTMGKSPFLP*ISLEHCPDAVT Trigger: AGTAACTGCATCTGGGCAATGTTCTAAAGAGATCAAGGGAAGAAAAGGAGATTTTCCCATGGTGTCGGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| 3UTR CAA 72 bp | AAGGAAGGTCCATATATCACATCCTTCTTGGAGGATTaGGCAAAATCCTACCGACACCATGGGAAAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KEGPYITSFLED*AKSYRHHGKIS Trigger: GGAGATTTTCCCATGGTGTCGGTAGGATTTTGCCAAATCCTCCAAGAAGGATGTGATATATGGACCTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR TCA 90 bp | ATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAACAGGCTCAAGCCAGATaGCACCGCCAACACCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MTSPSKYGKCVLGTQLIKQAQAR*HRQHQS Trigger: ACTTTGGTGTTGGCGGTGTCATCTGGCTTGAGCCTG...TTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGAAGGAAGGTCCATATATCACATCCTTCTTGGAGGATTTGGCAAAATCCTTCTTCCGGTATTTGTTaGAGCAGTGGCACAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: EGRKVHISHPSWRIWQNPSSGIC*SSGTRC Trigger: ACATCTTGTGCCACTGCTTCAACAAATACCGGAAGA...AGGATTTTGCCAAATCCTCCAAGAAGGATGTGATATATGGACCTTCCTTCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR GCA 90 bp | GAAGGAAGGAAGGTCCATATATCACATCCTTCTTGGAGGATTTGGCAAAATCCTGGCATAAGGTGCAAATaGCTTGACAAGAGATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGRKVHISHPSWRIWQNPGIRCK*LDKRYS Trigger: GCTGTATCTCTTGTCAAGGCATTTGCACCTTATGCC...AGGATTTTGCCAAATCCTCCAAGAAGGATGTGATATATGGACCTTCCTTCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR CCA 90 bp | TTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATCATAATCACAGAGCTTaGAGGAGTCCAGGAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FGYPVNKIYPWSAMSLFYHNHRA*RSPGGR Trigger: GCGGCCTCCTGGACTCCTCCAAGCTCTGTGATTATG...ATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTGTACCTGGATAGCAGCATAGCTTCAAAAGACAACTTTAGAGAATACAATCACTCAGGATGGTTTTaGTCTCAGGGATTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLYLDSSIASKDNFREYNHSGWF*SQGFQN Trigger: GTTCTGGAATCCCTGAGATCAAAACCATCCTGAGTG...ATTGTATTCTCTAAAGTTGTCTTTTGAAGCTATGCTGCTATCCAGGTACAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR GCA 90 bp | ATCTCCTTTTCTTCCCTTGATCTCTTTAGAACATTGCCCAGATGCAGTTACTTATTGGTAATCTCTCGGTaGCTATCTCGGTCTCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISFSSLDLFRTLPRCSYLLVISR*LSRSRD Trigger: ATCTCGAGACCGAGATAGGCACCGAGAGATTACCAA...TAAGTAACTGCATCTGGGCAATGTTCTAAAGAGATCAAGGGAAGAAAAGGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR GCA 90 bp | AATATATCCATGGTCCGCAATGTCCTTGTTTTATATCCACAACAAGCCCATGATCTTGCTTGTCATAGCTaGAGCCATCAGAGGCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: NISMVRNVLVLYPQQAHDLACHS*SHQRHN Trigger: ATTGTGCCTCTGATGGCTGCAGCTATGACAAGCAAG...ATCATGGGCTTGTTGTGGATATAAAACAAGGACATTGCGGACCATGGATATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATACCCTACACCAGGGATTaGCTCCTCCAAGAAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGTQLIKYIHGPQCPCFIPYTRD*LLQEVH Trigger: ATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGG...TATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAATGTGTTTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTGTATTGATGATGAGCTaGGCCCAGCTATTCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKCVLGTQLIKYIHGPQCVLMMS*AQLFHS Trigger: AGAGTGGAATAGCTGGGCCCAGCTCATCATCAATAC...ACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAACACATTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAATGTGTTTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTAGACCTCTCTCCGCTTaGCTTCATTCTTCCGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: GKCVLGTQLIKYIHGPQCRPLSA*LHSSGI Trigger: AATACCGGAAGAATGAAGCCAAGCGGAGAGAGGTCT...ACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAACACATTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CCA 90 bp | ATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAAGCGGCTGTTTCCGAATaGATTGATGGAGCGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MTSPSKYGKCVLGTQLIKAAVSE*IDGAEC Trigger: ACACTCCGCTCCATCAATCCATTCGGAAACAGCCGC...TTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATATCCACAGCGGCTGTTTCCGAATaGATTGATGGAGCGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQLIKYIHGPQCPCFISTAAVSE*IDGAEC Trigger: ACACTCCGCTCCATCAATCCATTCGGAAACAGCCGC...TGTGGATATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | TATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAGCATCGCTCACACTGTaGATTAAGGCCCATGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YDFTIQIWEMCFGYPVNKASLTL*IKAHVD Trigger: GTCAACATGGGCCTTAATTCACAGTGTGAGCGATGC...TTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATGCATCGCTCACACTGTaGATTAAGGCCCATGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FGYPVNKIYPWSAMSLFYASLTL*IKAHVD Trigger: GTCAACATGGGCCTTAATTCACAGTGTGAGCGATGC...ATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | AATATATCCATGGTCCGCAATGTCCTTGTTTTATATCCACAACAAGCCCATGATAAGGTGCAAATGCCTTaGCAAGAGATACAGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NISMVRNVLVLYPQQAHDKVQMP*QEIQQG Trigger: TCCTTGCTGTATCTCTTGTCAAGGCATTTGCACCTT...ATCATGGGCTTGTTGTGGATATAAAACAAGGACATTGCGGACCATGGATATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGCGCCTTTGCTTGTGTTaGAGTGGTTCTCATAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: MCFGYPVNKIYPWSAMSLRLCLC*SGSHNH Trigger: GTGATTATGAGAACCACTTCAACACAAGCAAAGGCG...CAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAACACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | ATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAAGAAAGGGGTATCCATTaGGACGGATGTGGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: MTSPSKYGKCVLGTQLIKERGIH*DGCGHH Trigger: ATGATGCCCACATCCGTCTCAATGGATACCCCTTTC...TTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | GACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAATAGAAAGGGGTATCCATTaGGACGGATGTGGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: DFTIQIWEMCFGYPVNKIERGIH*DGCGHH Trigger: ATGATGCCCACATCCGTCTCAATGGATACCCCTTTC...TATTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAATGTGTTTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTCCAAGAAGTCCATaGCTCTATTTGAAGAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GKCVLGTQLIKYIHGPQCPPRSP*LYLKSL Trigger: TAGGCTCTTCAAATAGAGTCATGGACTTCTTGGAGG...ACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAACACATTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | AATATATCCATGGTCCGCAATGTCCTTGTTTTATATCCACAACAAGCCCATGATACCACAGGCATAAGGTaGAAATGCCTTGACAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NISMVRNVLVLYPQQAHDTTGIR*KCLDKR Trigger: TCTCTTGTCAAGGCATTTGCACCTTATGCCTGTGGT...ATCATGGGCTTGTTGTGGATATAAAACAAGGACATTGCGGACCATGGATATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATTGTGGGCATCATAAATaGCCTCTCGCCCAAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FGYPVNKIYPWSAMSLFYCGHHK*PLAQEH Trigger: ATGCTCTTGGGCGAGAGGGCATTTATGATGCCCACA...ATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATATCCACAACTTGCCCAACTGTGTaGTTTTACGCTTCCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: TQLIKYIHGPQCPCFISTTCPTV*FYASDT Trigger: GGTGTCGGAAGCGTAAAACCACACAGTTGGGCAAGT...TGTGGATATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | ATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAAAAGTCTGTCATCCAGTaGGCAGAGATGTCTATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MTSPSKYGKCVLGTQLIKKSVIQ*AEMSIR Trigger: CCTGATAGACATCTCTGCTCACTGGATGACAGACTT...TTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCAT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | ATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAACACTCAGGATGGTTTTaGTCTCAGGGATTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MTSPSKYGKCVLGTQLIKHSGWF*SQGFQN Trigger: GTTCTGGAATCCCTGAGATCAAAACCATCCTGAGTG...TTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAATGTGTTTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTATATGCCTAGTACAATaGATGGCACGAGCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKCVLGTQLIKYIHGPQCICLVQ*MARAQR Trigger: TCTTTGAGCTCGTGCCATTCATTGTACTAGGCATAT...ACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAACACATTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATATCCACAACAGTCATACTGTCCTaGGTAAGGACAGTCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TQLIKYIHGPQCPCFISTTVILS*VRTVSK Trigger: CTTGCTGACTGTCCTTACTCAGGACAGTATGACTGT...TGTGGATATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | GACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAATAGTCCATGACTCTATTTaGAGAGCCTATTCCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: DFTIQIWEMCFGYPVNKIVHDSI*RAYSTT Trigger: GGTGGTGGAATAGGCTCTTCAAATAGAGTCATGGAC...TATTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | ATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAATTGGTAATCTCTCGGTaGCTATCTCGGTCTCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MTSPSKYGKCVLGTQLIKLVISR*LSRSRD Trigger: ATCTCGAGACCGAGATAGGCACCGAGAGATTACCAA...TTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | TATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAACGACGACAGGATACTTaGCCAACTGTGTGGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: YDFTIQIWEMCFGYPVNKRRQDT*PTVWFY Trigger: GTAAAACCACACAGTTGGGCAAGTATCCTGTCGTCG...TTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATCGACGACAGGATACTTaGCCAACTGTGTGGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FGYPVNKIYPWSAMSLFYRRQDT*PTVWFY Trigger: GTAAAACCACACAGTTGGGCAAGTATCCTGTCGTCG...ATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATCTTGCTTGTCATAGCTaGAGCCATCAGAGGCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: FGYPVNKIYPWSAMSLFYLACHS*SHQRHN Trigger: ATTGTGCCTCTGATGGCTGCAGCTATGACAAGCAAG...ATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CCA 90 bp | ATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAATCACTAGAGCTGCTCTaGAAGCTACTAAAACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MTSPSKYGKCVLGTQLIKSLELL*KLLKLP Trigger: GGGGAGTTTTAGTAGCTTCCAGAGCAGCTCTAGTGA...TTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115746.8 |
||
| 3UTR CAA 72 bp | AAAATCTCCTTTTCTTCCCTTGATCTCTTTAGAACATaGCCCAGATGCAGTTACTTAGGAAGGAGAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KISFSSLDLFRT*PRCSYLGRRMW Trigger: CCACATTCTCCTTCCTAAGTAACTGCATCTGGGCAATGTTCTAAAGAGATCAAGGGAAGAAAAGGAGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR TCA 90 bp | ACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATATCCACATCTTCCGGTATTTGTTaGAGCAGTGGCACAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TQLIKYIHGPQCPCFISTSSGIC*SSGTRC Trigger: ACATCTTGTGCCACTGCTTCAACAAATACCGGAAGA...TGTGGATATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | ATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAACGCCTTTGCTTGTGTTaGAGTGGTTCTCATAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: MTSPSKYGKCVLGTQLIKRLCLC*SGSHNH Trigger: GTGATTATGAGAACCACTTCAACACAAGCAAAGGCG...TTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATAATACAATCAGCTCCCTaGCTACACCAGCTATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGTQLIKYIHGPQCPCFIIQSAP*LHQLLK Trigger: CTTCAATAGCTGGTGTAGTCAGGGAGCTGATTGTAT...TATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | ATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAAGGCATAAGGTGCAAATaGCTTGACAAGAGATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: MTSPSKYGKCVLGTQLIKGIRCK*LDKRYS Trigger: GCTGTATCTCTTGTCAAGGCATTTGCACCTTATGCC...TTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATAACCACAGGCATAAGGTaGAAATGCCTTGACAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTQLIKYIHGPQCPCFITTGIR*KCLDKR Trigger: TCTCTTGTCAAGGCATTTGCACCTTATGCCTGTGGT...TATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATAATATGCCTAGTACAATaGATGGCACGAGCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTQLIKYIHGPQCPCFIICLVQ*MARAQR Trigger: TCTTTGAGCTCGTGCCATTCATTGTACTAGGCATAT...TATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAATGTGTTTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCGAGCATTTTCAATTaGAATAATGAGATCTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GKCVLGTQLIKYIHGPQCPSIFN*NNEISS Trigger: CGAAGAGATCTCATTATTTCAATTGAAAATGCTCGG...ACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAACACATTTCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATATCCACATCCACCACCATTGTATaGCTTGTTCCCTTCTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLIKYIHGPQCPCFISTSTTIV*LVPFYF Trigger: GAAATAGAAGGGAACAAGTCATACAATGGTGGTGGA...TGTGGATATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | GACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAATAGAATTCCAGCAACAGTaGTCATGGTTAAACCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DFTIQIWEMCFGYPVNKIEFQQQ*SWLNQN Trigger: GTTCTGGTTTAACCATGAGCACTGTTGCTGGAATTC...TATTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | TATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAATCAGGGTCTTGGTTTaGCATCTGTGCTATATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YDFTIQIWEMCFGYPVNKIRVLV*HLCYML Trigger: AAGCATATAGCACAGATGGCAAACCAAGACCCTGAT...TTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATATATTTGTTGAAGCAGTaGCACAAGATGTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGTQLIKYIHGPQCPCFIYLLKQ*HKMFPQ Trigger: CTGTGGGAACATCTTGTGCCACTGCTTCAACAAATA...TATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATCCCAATCAATTGTGTTaGAATCATCATAGGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FGYPVNKIYPWSAMSLFYPNQLC*NHHRSL Trigger: TAGGGACCTATGATGATTTCAACACAATTGATTGGG...ATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATACTTCATCACATCCATTaGCAGAGTCTTATGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGTQLIKYIHGPQCPCFILHHIH*QSLMSK Trigger: TTTGCTCATAAGACTCTGGCAATGGATGTGATGAAG...TATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| 3UTR CAA 72 bp | TTGGTTCCATTTCTTAACACTTTGCATAGCACTTACTaGTCAAAAGTGCTTTCCATTCATTGTCTCAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LVPFLNTLHSTY*SKVLSIHCLSL Trigger: TAAACTGAGACAATGAATGGAAAGCACTTTTGACAAGTAAGTGCTATGCAAAGTGTTAAGAAATGGAACCAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS GCA 90 bp | TTGTTGAAGCAGTGGCACAAGATGTTCCCACAGCAGCAAGCCACGTaGACCAGGGGGCCCTCCTTGCCCAGGCTCAAGCCAGATGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LLKQWHKMFPQQQAT*TRGPSLPRLKPDDT Trigger: GGTGTCATCTGGCTTGAGCCTGGGCAAGGAGGGCCCCCTGGTGCACGTGGCTTGCTGCTGTGGGAACATCTTGTGCCACTGCTTCAACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS TCA 90 bp | CCACGCCAGCAGGTCTGTCAGGCAGCTCACCGCCTTTGCTTGTGTTaGAGTGGTTCTCATAATCACAGAGCTTGGAGGAGTCCAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRQQVCQAAHRLCLC*SGSHNHRAWRSPGG Trigger: GCCTCCTGGACTCCTCCAAGCTCTGTGATTATGAGAACCACTTCAACACAAGCAAAGGCGGTGAGCTGCCTGACAGACCTGCTGGCGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS CCA 90 bp | AGTGAAGGGGCTGAGGTCCAGGATGTTCCGAAGCTTCAGGGTAGGTaGGGTGTATGGAGGCATTGGAGGCGAATGCTCCGTGAAATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SEGAEVQDVPKLQGR*GVWRHWRRMLREIN Trigger: ATTTATTTCACGGAGCATTCGCCTCCAATGCCTCCATACACCCCACCTACCCTGAAGCTTCGGAACATCCTGGACCTCAGCCCCTTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCAGCACCAAGCTTCCGGTGGAAACTCGGGACTGTATTAGCTTTGGTTGAATCCCTACACCAGGGATaGGCTCCTCCAAGAAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSAPSFRWKLGTVLALVESLHQG*APPRSP Trigger: TGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGGA...TTCAACCAAAGCTAATACAGTCCCGAGTTTCCACCGGAAGCTTGGTGCTGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS TCA 90 bp | CATCATAGGTCCCTACACCAGGGATTGGCTCCTCCAAGAAGTCCATaGCTCTATTTGAAGAGCCTATTCCACCACCATTGTATGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HHRSLHQGLAPPRSP*LYLKSLFHHHCMTC Trigger: ACAAGTCATACAATGGTGGTGGAATAGGCTCTTCAAATAGAGTCATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGGACCTATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115746.8 ENSMUST00000128319.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCAGCACCAAGCTTCCGGTGGAAACTCGGGACTGTATTAGCTTTGGTTGAATTCCACTCTGGACATTaGTCTCTGTGTTCAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSAPSFRWKLGTVLALVEFHSGH*SLCSKV Trigger: TACCTTTGAACACAGAGACAAATGTCCAGAGTGGAA...TTCAACCAAAGCTAATACAGTCCCGAGTTTCCACCGGAAGCTTGGTGCTGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS GCA 90 bp | CAGCTATTCCACTCTGGACATTTGTCTCTGTGTTCAAAGGTAACATaGTCAGAATTCCAGCAACAGTGCTCATGGTTAAACCAGAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: QLFHSGHLSLCSKVT*SEFQQQCSWLNQNP Trigger: GGGGTTCTGGTTTAACCATGAGCACTGTTGCTGGAATTCTGAGCATGTTACCTTTGAACACAGAGACAAATGTCCAGAGTGGAATAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 ENSMUST00000128319.2 |
||
| CDS GCA 90 bp | ATTGAAATAATGAGATCTCTTCGAAGAACAAAGCCTACAAGTCTTTaGGACTCTCGGGACACTACCACCGGAAAGCCACTGTACGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IEIMRSLRRTKPTSL*DSRDTTTGKPLYVV Trigger: AACCACGTACAGTGGCTTTCCGGTGGTAGTGTCCCGAGAGTCGCAAAGACTTGTAGGCTTTGTTCTTCGAAGAGATCTCATTATTTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS CCA 90 bp | TCCCTGATCTGTATTGATGATGAGCTGGGCCCAGCTATTCCACTCTaGACATTTGTCTCTGTGTTCAAAGGTAACATGCTCAGAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLICIDDELGPAIPL*TFVSVFKGNMLRIP Trigger: TGGAATTCTGAGCATGTTACCTTTGAACACAGAGACAAATGTCCAGAGTGGAATAGCTGGGCCCAGCTCATCATCAATACAGATCAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 ENSMUST00000128319.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCGTCCAGTTATTTTAGTACTGGTGGTCTTTTCAAAGAAATGCACCGGGATTTCTTCCGGTATTTGTaGAAGCAGTGGCACAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QASSYFSTGGLFKEMHRDFFRYL*KQWHKM Trigger: CATCTTGTGCCACTGCTTCAACAAATACCGGAAGAA...ATCCCGGTGCATTTCTTTGAAAAGACCACCAGTACTAAAATAACTGGACGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR CAA 90 bp | GAATCTTCACAGTCTAGAAAATGCCATTGCGATTTCCTTCTGGCTTGCCTTTCTATCCGGGTATATTCATaGGGGAAAGCCAAGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ESSQSRKCHCDFLLACLSIRVYS*GKAKMA Trigger: TGCCATCTTGGCTTTCCCCAATGAATATACCCGGAT...AGAAAGGCAAGCCAGAAGGAAATCGCAATGGCATTTTCTAGACTGTGAAGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
||
| CDS-3UTR CAA 90 bp | ATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAACCAAGTAAGCGCCCGTaGTGTGTAACCAGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: MTSPSKYGKCVLGTQLIKPSKRP*CVTRHW Trigger: CCAGTGCCTGGTTACACACAACGGGCGCTTACTTGG...TTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATATCCACACCAAGTAAGCGCCCGTaGTGTGTAACCAGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: TQLIKYIHGPQCPCFISTPSKRP*CVTRHW Trigger: CCAGTGCCTGGTTACACACAACGGGCGCTTACTTGG...TGTGGATATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CAA 90 bp | TATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAATCCCTACACCAGGGATaGGCTCCTCCAAGAAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YDFTIQIWEMCFGYPVNKSLHQG*APPRSP Trigger: TGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGGA...TTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGTTTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGAAGACCTCTCTCCGCTaGGCTTCATTCTTCCGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: MCFGYPVNKIYPWSAMSLKTSLR*ASFFRY Trigger: ATACCGGAAGAATGAAGCCAAGCGGAGAGAGGTCTT...CAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGTTTACTCTTTCGTGAACCCTTCCTAATGCAGTATCACAGAAGCCTAACTATCCGGGTATATTCATaGGGGAAAGCCAAGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCLLFREPFLMQYHRSLTIRVYS*GKAKMA Trigger: TGCCATCTTGGCTTTCCCCAATGAATATACCCGGAT...AGTTAGGCTTCTGTGATACTGCATTAGGAAGGGTTCACGAAAGAGTAAACAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CAA 90 bp | GACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAATAGGCAGCTCACCGCCTTaGCTTGTGTTGAAGTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DFTIQIWEMCFGYPVNKIGSSPP*LVLKWF Trigger: GAACCACTTCAACACAAGCAAAGGCGGTGAGCTGCC...TATTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATAGGCAGCTCACCGCCTTaGCTTGTGTTGAAGTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGTQLIKYIHGPQCPCFIGSSPP*LVLKWF Trigger: GAACCACTTCAACACAAGCAAAGGCGGTGAGCTGCC...TATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAATGTGTTTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTAGAAAGGGGTATCCATaGAGACGGATGTGGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GKCVLGTQLIKYIHGPQCRKGYP*RRMWAS Trigger: TGATGCCCACATCCGTCTCAATGGATACCCCTTTCT...ACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAACACATTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS-3UTR CAA 90 bp | ATCCAGTATTTTACCCTTGAGGTATGTAGTCATTTGAGGCTACTGACAGACTTCGACTCTTTGCTTTTATaGGTAATCTCTCGGTGCCTA | + |
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Preference number: 5 (lower is better) Translates to: IQYFTLEVCSHLRLLTDFDSLLL*VISRCL Trigger: TAGGCACCGAGAGATTACCAATAAAAGCAAAGAGTC...GAAGTCTGTCAGTAGCCTCAAATGACTACATACCTCAAGGGTAAAATACTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| CDS-3UTR CAA 90 bp | TCTTGTTTACTCTTTCGTGAACCCTTCCTAATGCAGTATCACAGAAGCCTAACTGACTCTTTGCTTTTATaGGTAATCTCTCGGTGCCTA | + |
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Preference number: 5 (lower is better) Translates to: SCLLFREPFLMQYHRSLTDSLLL*VISRCL Trigger: TAGGCACCGAGAGATTACCAATAAAAGCAAAGAGTC...AGTTAGGCTTCTGTGATACTGCATTAGGAAGGGTTCACGAAAGAGTAAACAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS-3UTR CAA 90 bp | ATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAAAAGACCTCTCTCCGCTaGGCTTCATTCTTCCGGTAT | + |
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Preference number: 5 (lower is better) Translates to: MTSPSKYGKCVLGTQLIKKTSLR*ASFFRY Trigger: ATACCGGAAGAATGAAGCCAAGCGGAGAGAGGTCTT...TTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS-3UTR CAA 90 bp | GACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAATAAGAAAGGGGTATCCATaGAGACGGATGTGGGCATCA | + |
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Preference number: 5 (lower is better) Translates to: DFTIQIWEMCFGYPVNKIRKGYP*RRMWAS Trigger: TGATGCCCACATCCGTCTCAATGGATACCCCTTTCT...TATTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS TCA 90 bp | ATAAGGAGCATTAACAACCAACCAGAGAAAGCATCGCTCACACTGTaGATTAAGGCCCATGTTGACTCTTTGCTTTTATTGGTAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: IRSINNQPEKASLTL*IKAHVDSLLLLVIS Trigger: AGAGATTACCAATAAAAGCAAAGAGTCAACATGGGCCTTAATTCACAGTGTGAGCGATGCTTTCTCTGGTTGGTTGTTAATGCTCCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 ENSMUST00000128319.2 |
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| CDS-3UTR CAA 90 bp | TCTTGTTTACTCTTTCGTGAACCCTTCCTAATGCAGTATCACAGAAGCCTAACTGAATTAAGGCCCATGTaGACTCTTTGCTTTTATTGG | + |
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Preference number: 5 (lower is better) Translates to: SCLLFREPFLMQYHRSLTELRPM*TLCFYW Trigger: CCAATAAAAGCAAAGAGTCAACATGGGCCTTAATTC...AGTTAGGCTTCTGTGATACTGCATTAGGAAGGGTTCACGAAAGAGTAAACAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS-3UTR CAA 90 bp | GGGAAATGTGTTTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCACCATTGTATGACTaGTTCCCTTCTATTTCTCGA | + |
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Preference number: 5 (lower is better) Translates to: GKCVLGTQLIKYIHGPQCPPLYD*FPSISR Trigger: TCGAGAAATAGAAGGGAACAAGTCATACAATGGTGG...ACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAACACATTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115746.8 |
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| CDS-3UTR CAA 90 bp | ATCTCCTTTTCTTCCCTTGATCTCTTTAGAACATTGCCCAGATGCAGTTACTTAACCAAAGTGATAGTTTaGATGACAAGGGTCCACTTA | + |
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Preference number: 5 (lower is better) Translates to: ISFSSLDLFRTLPRCSYLTKVIV*MTRVHL Trigger: TAAGTGGACCCTTGTCATCAAAACTATCACTTTGGT...TAAGTAACTGCATCTGGGCAATGTTCTAAAGAGATCAAGGGAAGAAAAGGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004428.14 |
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| CDS-3UTR CAA 90 bp | GACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAATATTCTTCCGGTATTTGTaGAAGCAGTGGCACAAGATG | + |
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Preference number: 5 (lower is better) Translates to: DFTIQIWEMCFGYPVNKIFFRYL*KQWHKM Trigger: CATCTTGTGCCACTGCTTCAACAAATACCGGAAGAA...TATTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS-3UTR CAA 90 bp | ATGACTTCACCATCCAAATATGGGAAATGTGTTTTGGGTACCCAGTTAATAAAATTCCACTCTGGACATTaGTCTCTGTGTTCAAAGGTA | + |
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Preference number: 5 (lower is better) Translates to: MTSPSKYGKCVLGTQLIKFHSGH*SLCSKV Trigger: TACCTTTGAACACAGAGACAAATGTCCAGAGTGGAA...TTTTATTAACTGGGTACCCAAAACACATTTCCCATATTTGGATGGTGAAGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS-3UTR CAA 90 bp | TTTGGGTACCCAGTTAATAAAATATATCCATGGTCCGCAATGTCCTTGTTTTATACCAAAGTGATAGTTTaGATGACAAGGGTCCACTTA | + |
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Preference number: 5 (lower is better) Translates to: FGYPVNKIYPWSAMSLFYTKVIV*MTRVHL Trigger: TAAGTGGACCCTTGTCATCAAAACTATCACTTTGGT...ATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS CCA 72 bp | ATTCCAAGTAAGCGCCCGTTGTGTGTAACCAGGCACTaGCGCAGGCCCAGCTTGCGGAAGATGTCCACCACG | + |
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Preference number: 6 (lower is better) Translates to: IPSKRPLCVTRH*RRPSLRKMSTT Trigger: CGTGGTGGACATCTTCCGCAAGCTGGGCCTGCGCCAGTGCCTGGTTACACACAACGGGCGCTTACTTGGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS CCA 72 bp | GCTGAGGTCCAGGATGTTCCGAAGCTTCAGGGTAGGTaGGGTGTATGGAGGCATTGGAGGCGAATGCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: AEVQDVPKLQGR*GVWRHWRRMLR Trigger: ACGGAGCATTCGCCTCCAATGCCTCCATACACCCCACCTACCCTGAAGCTTCGGAACATCCTGGACCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS TCA 72 bp | GAGCTCCCCAGAGGCCACCGAATATGCCTAGTACAATaGATGGCACGAGCTCAAAGAGATGCCACGGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: ELPRGHRICLVQ*MARAQRDATGC Trigger: ACACCCCGTGGCATCTCTTTGAGCTCGTGCCATTCATTGTACTAGGCATATTCGGTGGCCTCTGGGGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS CAA 72 bp | ATGGCCGTCACAATGAGTACCTCGACGACAGGATACTaGCCCAACTGTGTGGTTTTACGCTTCCGACACCAG | + |
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Preference number: 6 (lower is better) Translates to: MAVTMSTSTTGY*PNCVVLRFRHQ Trigger: CTGGTGTCGGAAGCGTAAAACCACACAGTTGGGCAAGTATCCTGTCGTCGAGGTACTCATTGTGACGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS CAA 90 bp | GCAGCTGATAAGACCTCTCTCCGCTTGGCTTCATTCTTCCGGTATTaGTTGAAGCAGTGGCACAAGATGTTCCCACAGCAGCAAGCCACG | + |
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Preference number: 6 (lower is better) Translates to: AADKTSLRLASFFRY*LKQWHKMFPQQQAT Trigger: CGTGGCTTGCTGCTGTGGGAACATCTTGTGCCACTGCTTCAACAAATACCGGAAGAATGAAGCCAAGCGGAGAGAGGTCTTATCAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS TCA 72 bp | CCTCTCTCCGCTTGGCTTCATTCTTCCGGTATTTGTTaGAGCAGTGGCACAAGATGTTCCCACAGCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: PLSAWLHSSGIC*SSGTRCSHSSK Trigger: CTTGCTGCTGTGGGAACATCTTGTGCCACTGCTTCAACAAATACCGGAAGAATGAAGCCAAGCGGAGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS TCA 72 bp | CAGGTCTGTCAGGCAGCTCACCGCCTTTGCTTGTGTTaGAGTGGTTCTCATAATCACAGAGCTTGGAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: QVCQAAHRLCLC*SGSHNHRAWRS Trigger: ACTCCTCCAAGCTCTGTGATTATGAGAACCACTTCAACACAAGCAAAGGCGGTGAGCTGCCTGACAGACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS CCA 72 bp | CCGAAGCTTCAGGGTAGGTGGGGTGTATGGAGGCATTaGAGGCGAATGCTCCGTGAAATAAATGATGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: PKLQGRWGVWRH*RRMLREINDGS Trigger: ACTTCCATCATTTATTTCACGGAGCATTCGCCTCCAATGCCTCCATACACCCCACCTACCCTGAAGCTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS GCA 72 bp | ATGAGATCTCTTCGAAGAACAAAGCCTACAAGTCTTTaGGACTCTCGGGACACTACCACCGGAAAGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: MRSLRRTKPTSL*DSRDTTTGKPL Trigger: CAGTGGCTTTCCGGTGGTAGTGTCCCGAGAGTCGCAAAGACTTGTAGGCTTTGTTCTTCGAAGAGATCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS CAA 72 bp | ACCTCTCTCCGCTTGGCTTCATTCTTCCGGTATTTGTaGAAGCAGTGGCACAAGATGTTCCCACAGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: TSLRLASFFRYL*KQWHKMFPQQQ Trigger: TTGCTGCTGTGGGAACATCTTGTGCCACTGCTTCAACAAATACCGGAAGAATGAAGCCAAGCGGAGAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS CAA 72 bp | AAGACCTCTCTCCGCTTGGCTTCATTCTTCCGGTATTaGTTGAAGCAGTGGCACAAGATGTTCCCACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: KTSLRLASFFRY*LKQWHKMFPQQ Trigger: CTGCTGTGGGAACATCTTGTGCCACTGCTTCAACAAATACCGGAAGAATGAAGCCAAGCGGAGAGAGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS TCA 72 bp | TCCCTACACCAGGGATTGGCTCCTCCAAGAAGTCCATaGCTCTATTTGAAGAGCCTATTCCACCACCATTGT | + |
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Preference number: 6 (lower is better) Translates to: SLHQGLAPPRSP*LYLKSLFHHHC Trigger: ACAATGGTGGTGGAATAGGCTCTTCAAATAGAGTCATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115746.8 ENSMUST00000128319.2 |
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| CDS CAA 72 bp | AATGAGATCTCTTCGAAGAACAAAGCCTACAAGTCTTaGCGACTCTCGGGACACTACCACCGGAAAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: NEISSKNKAYKS*RLSGHYHRKAT Trigger: AGTGGCTTTCCGGTGGTAGTGTCCCGAGAGTCGCAAAGACTTGTAGGCTTTGTTCTTCGAAGAGATCTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS GCA 72 bp | CAAGGGGTCATTTCTCCGGGGCTTCATCACATCCATTaGCAGAGTCTTATGAGCAAATTCTTCTTTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QGVISPGLHHIH*QSLMSKFFFGF Trigger: GAAGCCAAAGAAGAATTTGCTCATAAGACTCTGGCAATGGATGTGATGAAGCCCCGGAGAAATGACCCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 |
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| CDS CAA 90 bp | TCTGTATTGATGATGAGCTGGGCCCAGCTATTCCACTCTGGACATTaGTCTCTGTGTTCAAAGGTAACATGCTCAGAATTCCAGCAACAG | + |
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Preference number: 6 (lower is better) Translates to: SVLMMSWAQLFHSGH*SLCSKVTCSEFQQQ Trigger: CTGTTGCTGGAATTCTGAGCATGTTACCTTTGAACACAGAGACAAATGTCCAGAGTGGAATAGCTGGGCCCAGCTCATCATCAATACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 ENSMUST00000128319.2 |
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| CDS TCA 72 bp | CCTGTACATATCCCTTCTTTTAAGTCTGTCATCCAGTaGGCAGAGATGTCTATCAGGCCAGCTAAGGAACCT | + |
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Preference number: 6 (lower is better) Translates to: PVHIPSFKSVIQ*AEMSIRPAKEP Trigger: AGGTTCCTTAGCTGGCCTGATAGACATCTCTGCTCACTGGATGACAGACTTAAAAGAAGGGATATGTACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 ENSMUST00000128319.2 |
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| CDS CAA 72 bp | ATGATGAGCTGGGCCCAGCTATTCCACTCTGGACATTaGTCTCTGTGTTCAAAGGTAACATGCTCAGAATTC | + |
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Preference number: 6 (lower is better) Translates to: MMSWAQLFHSGH*SLCSKVTCSEF Trigger: GAATTCTGAGCATGTTACCTTTGAACACAGAGACAAATGTCCAGAGTGGAATAGCTGGGCCCAGCTCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 ENSMUST00000128319.2 |
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| CDS TCA 72 bp | ATTAACAACCAACCAGAGAAAGCATCGCTCACACTGTaGATTAAGGCCCATGTTGACTCTTTGCTTTTATTG | + |
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Preference number: 6 (lower is better) Translates to: INNQPEKASLTL*IKAHVDSLLLL Trigger: CAATAAAAGCAAAGAGTCAACATGGGCCTTAATTCACAGTGTGAGCGATGCTTTCTCTGGTTGGTTGTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004428.14 ENSMUST00000115746.8 ENSMUST00000128319.2 |
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