Pregenerated sensors for CLCN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000605Ensembl transcript IDs: ENSMUST00000000619.8, ENSMUST00000209916.2, ENSMUST00000210061.2, ENSMUST00000210362.2, ENSMUST00000210594.2, ENSMUST00000211574.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCACGATGGCGGTGACGGCTGTCACCGCAATAACCTCCAACACTaGGTACCTGCCCAGCCTGGTGGTCTTACGCCTCCTGCACCAAGC | + |
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Preference number: 1 (lower is better) Translates to: GHDGGDGCHRNNLQH*VPAQPGGLTPPAPS Trigger: GCTTGGTGCAGGAGGCGTAAGACCACCAGGCTGGGCAGGTACCCAGTGTTGGAGGTTATTGCGGTGACAGCCGTCACCGCCATCGTGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR TCA 90 bp | GCCGGTCCGGAATGTCATCCACAGGCCGAGTCATGTTGGGGTCGTTaGTGTAGTCACAGAGCTGAGAAGACTCGAGAGCCCCACAATCGT | + |
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Preference number: 1 (lower is better) Translates to: AGPECHPQAESCWGR*CSHRAEKTREPHNR Trigger: ACGATTGTGGGGCTCTCGAGTCTTCTCAGCTCTGTGACTACATCAACGACCCCAACATGACTCGGCCTGTGGATGACATTCCGGACCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR CCA 90 bp | ATGACAGCTCCAGACTCCAGTCCCATCAAGGTATCTGGGTCAAGATaGAGTCTGAATGTTTCTGGCTCCAGGGTCCCCTTGTGGCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: MTAPDSSPIKVSGSR*SLNVSGSRVPLWLA Trigger: TGCCAGCCACAAGGGGACCCTGGAGCCAGAAACATTCAGACTCCATCTTGACCCAGATACCTTGATGGGACTGGAGTCTGGAGCTGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR CCA 90 bp | CAGTCCCATCAAGGTATCTGGGTCAAGATGGAGTCTGAATGTTTCTaGCTCCAGGGTCCCCTTGTGGCTGGCACTGGTCGTATTTCTACC | + |
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Preference number: 1 (lower is better) Translates to: QSHQGIWVKMESECF*LQGPLVAGTGRIST Trigger: GGTAGAAATACGACCAGTGCCAGCCACAAGGGGACCCTGGAGCCAGAAACATTCAGACTCCATCTTGACCCAGATACCTTGATGGGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR CCA 90 bp | GCAACGCCCATAGAATGTACATTAAGTAATTCAGAATGTAAGCGCTaGCGCCCTCTGACTGGCTCAGAAGAAGCTCTGACCACTTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: ATPIECTLSNSECKR*RPLTGSEEALTTSA Trigger: GGCAGAAGTGGTCAGAGCTTCTTCTGAGCCAGTCAGAGGGCGCCAGCGCTTACATTCTGAATTACTTAATGTACATTCTATGGGCGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR TCA 90 bp | CCACCAGATTCCCAGTCACATTTTTCATGCAGCGATGCAGCACCATaGTCTGACGCCCAAACCCTTAGTCACACCCTTTCTGAAAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: PPDSQSHFSCSDAAP*SDAQTLSHTLSEKA Trigger: TGCTTTTTCAGAAAGGGTGTGACTAAGGGTTTGGGCGTCAGATCATGGTGCTGCATCGCTGCATGAAAAATGTGACTGGGAATCTGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR GCA 90 bp | AGGCGAATGGGGCATATAACAGATTTCCAGCCAATGGTTGTATGCTaGGCATCTCTGGGAAAGATATACACATTCATCTTCGTACTCGCC | + |
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Preference number: 1 (lower is better) Translates to: RRMGHITDFQPMVVC*ASLGKIYTFIFVLA Trigger: GGCGAGTACGAAGATGAATGTGTATATCTTTCCCAGAGATGCGCAGCATACAACCATTGGCTGGAAATCTGTTATATGCCCCATTCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| 3UTR CCA 90 bp | TTTGGAGGAGTTCCCACTGAGAACTCATATGCCTCACTCTCATCATaGCTCTATCTGGAAGACCTGAGAAGAAAGTTAAGTAGAAACACT | + |
|
Preference number: 1 (lower is better) Translates to: FGGVPTENSYASLSS*LYLEDLRRKLSRNT Trigger: AGTGTTTCTACTTAACTTTCTTCTCAGGTCTTCCAGATAGAGCCATGATGAGAGTGAGGCATATGAGTTCTCAGTGGGAACTCCTCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| 3UTR GCA 90 bp | TGTACTTATTCCTTTTCAATGAGCCCACAGCCTTTACTATATAACTaGATTTTGTACCATTCCAGTGTACTGAATGCCAAGTGGATGCAT | + |
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Preference number: 1 (lower is better) Translates to: CTYSFSMSPQPLLYN*ILYHSSVLNAKWMH Trigger: ATGCATCCACTTGGCATTCAGTACACTGGAATGGTACAAAATGCAGTTATATAGTAAAGGCTGTGGGCTCATTGAAAAGGAATAAGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGTGCTCTGGCGAGTGTAGGGATTGGGGTAGGCCACGATGGCGGTGACGGCGCTCAGAAGAAGCTCTaGCCACTTCTGCCACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: TGALASVGIGVGHDGGDGAQKKL*PLLPQG Trigger: CCCCTGTGGCAGAAGTGGTCAGAGCTTCTTCTGAGC...GCCGTCACCGCCATCGTGGCCTACCCCAATCCCTACACTCGCCAGAGCACCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGTGCTCTGGCGAGTGTAGGGATTGGGGTAGGCCACGATGGCGGTGACGGCGGTCAAGATGGAGTCTaGATGTTTCTGGCTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TGALASVGIGVGHDGGDGGQDGV*MFLAPG Trigger: CCCTGGAGCCAGAAACATTCAGACTCCATCTTGACC...GCCGTCACCGCCATCGTGGCCTACCCCAATCCCTACACTCGCCAGAGCACCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGTGCTCTGGCGAGTGTAGGGATTGGGGTAGGCCACGATGGCGGTGACGGCCCACAGCGAGATCGATaGCTCCAGCCAAGGTACTTT | + |
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Preference number: 2 (lower is better) Translates to: TGALASVGIGVGHDGGDGPQRDR*LQPRYF Trigger: AAAGTACCTTGGCTGGAGTCATCGATCTCGCTGTGG...GCCGTCACCGCCATCGTGGCCTACCCCAATCCCTACACTCGCCAGAGCACCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGTGCTCTGGCGAGTGTAGGGATTGGGGTAGGCCACGATGGCGGTGACGGCCAACAGCACTGTTCATaGCTGTACCAGAATGCGGAC | + |
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Preference number: 2 (lower is better) Translates to: TGALASVGIGVGHDGGDGQQHCS*LYQNAD Trigger: GTCCGCATTCTGGTACAGCCATGAACAGTGCTGTTG...GCCGTCACCGCCATCGTGGCCTACCCCAATCCCTACACTCGCCAGAGCACCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGACGGCTGTCACCGCAATAACCTCCAACACTGGGTACCTGCCCAGCCTGGTAGGAGACGGATGCAATaGAGCCACCAGATTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: GDGCHRNNLQHWVPAQPGRRRMQ*SHQIPS Trigger: ACTGGGAATCTGGTGGCTTCATTGCATCCGTCTCCT...ACCAGGCTGGGCAGGTACCCAGTGTTGGAGGTTATTGCGGTGACAGCCGTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR CAA 90 bp | TACCTGCCCAGCCTGGTGGTCTTACGCCTCCTGCACCAAGCAATGTaGCAGCGTGTGAAGAGGGTTCCCCATAAACCCCCAAAGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: YLPSLVVLRLLHQAM*QRVKRVPHKPPKTP Trigger: TGGAGTCTTTGGGGGTTTATGGGGAACCCTCTTCACACGCTGCAACATTGCTTGGTGCAGGAGGCGTAAGACCACCAGGCTGGGCAGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR TCA 90 bp | TTCATGGCTGTACCAGAATGCGGACAGACAGACCCCCTCCTTGAGGTCCGTCATCTGCCAGCAGCCCAATaGGTAGCATCACCACCCATC | + |
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Preference number: 2 (lower is better) Translates to: FMAVPECGQTDPLLEVRHLPAAQ*VASPPI Trigger: GATGGGTGGTGATGCTACTCATTGGGCTGCTGGCAG...ATGACGGACCTCAAGGAGGGGGTCTGTCTGTCCGCATTCTGGTACAGCCATGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209916.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGACGGCTGTCACCGCAATAACCTCCAACACTGGGTACCTGCCCAGCCTGGTAGGTACTTTTGCTGGTaGTCTGACAAGGAAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: GDGCHRNNLQHWVPAQPGRYFCW*SDKEGH Trigger: GTGTCCTTCCTTGTCAGATCACCAGCAAAAGTACCT...ACCAGGCTGGGCAGGTACCCAGTGTTGGAGGTTATTGCGGTGACAGCCGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGAGCACACCTCCTATCGGAGCACCAAAGGCCACAGAGACACCAGCAGCACCCTGTCCTCAAAAGTaGTCTCGTTGGAGGTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: LKSTPPIGAPKATETPAAPCPQK*SRWRSN Trigger: GTTGGACCTCCAACGAGACCACTTTTGAGGACAGGG...TGCTGCTGGTGTCTCTGTGGCCTTTGGTGCTCCGATAGGAGGTGTGCTCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR CCA 90 bp | TTCATGGCTGTACCAGAATGCGGACAGACAGACCCCCTCCTTGAGGTCCGTCATAGTTCTTTCTCTCTGTaGAACCGACATGCGACACAC | + |
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Preference number: 2 (lower is better) Translates to: FMAVPECGQTDPLLEVRHSSFSL*NRHATH Trigger: GTGTGTCGCATGTCGGTTCCACAGAGAGAAAGAACT...ATGACGGACCTCAAGGAGGGGGTCTGTCTGTCCGCATTCTGGTACAGCCATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR CAA 90 bp | CCAAGGCTCAGGCCAGAGGATACGACGAGCACGAGGGTGACAGTCTaGATTAGAAGAGTCCATTTCCCCAAGTATCCCCTGATGATAAAG | + |
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Preference number: 2 (lower is better) Translates to: PRLRPEDTTSTRVTV*IRRVHFPKYPLMIK Trigger: CTTTATCATCAGGGGATACTTGGGGAAATGGACTCTTCTAATCAAGACTGTCACCCTCGTGCTCGTCGTATCCTCTGGCCTGAGCCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATAGAATGTACATTAAGTAATTCAGAATGTAAGCGCTGGCGCCCTCTGACTGGGTCCCCTTGTGGCTaGCACTGGTCGTATTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: PIECTLSNSECKRWRPLTGSPCG*HWSYFY Trigger: GTAGAAATACGACCAGTGCCAGCCACAAGGGGACCC...AGTCAGAGGGCGCCAGCGCTTACATTCTGAATTACTTAATGTACATTCTATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAAATTGATGCTTTGGGCTTGCAAATCAGTGATGACGCAAGTGTCCCCTCAAGAAATGAGATGGCCATaGGTAGACCACCTATTAGGG | + |
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Preference number: 2 (lower is better) Translates to: VKLMLWACKSVMTQVSPQEMRWP*VDHLLG Trigger: CCCTAATAGGTGGTCTACTCATGGCCATCTCATTTC...TTGAGGGGACACTTGCGTCATCACTGATTTGCAAGCCCAAAGCATCAATTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGACAGCCAGAAATGCAAACAGCAACGCCCATAGAATGTACATTAAGTAATGAGTCTGAATGTTTCTaGCTCCAGGGTCCCCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: GRQPEMQTATPIECTLSNESECF*LQGPLV Trigger: CACAAGGGGACCCTGGAGCCAGAAACATTCAGACTC...ATTACTTAATGTACATTCTATGGGCGTTGCTGTTTGCATTTCTGGCTGTCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGACAGCCAGAAATGCAAACAGCAACGCCCATAGAATGTACATTAAGTAATTCTACCCCAGGTATCTaGCATTGTCACTCTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: GRQPEMQTATPIECTLSNSTPGI*HCHSQS Trigger: AGACTGAGAGTGACAATGGCAGATACCTGGGGTAGA...ATTACTTAATGTACATTCTATGGGCGTTGCTGTTTGCATTTCTGGCTGTCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR CAA 90 bp | TATTCCTTTTCAATGAGCCCACAGCCTTTACTATATAACTGCATTTaGTACCATTCCAGTGTACTGAATGCCAAGTGGATGCATGACGAC | + |
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Preference number: 2 (lower is better) Translates to: YSFSMSPQPLLYNCI*YHSSVLNAKWMHDD Trigger: GTCGTCATGCATCCACTTGGCATTCAGTACACTGGAATGGTACAAAATGCAGTTATATAGTAAAGGCTGTGGGCTCATTGAAAAGGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACAGATACCAATCCCACTTCCCTATCCACAGAATCGAAATTCCATCCAGAATACCCCTTTGTCTTTTaGACTCAAAGCTTCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: MTDTNPTSLSTESKFHPEYPFVF*TQSFMC Trigger: ACACATGAAGCTTTGAGTCCAAAAGACAAAGGGGTA...TTCTGGATGGAATTTCGATTCTGTGGATAGGGAAGTGGGATTGGTATCTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGCCATTAAGTTCAAACACAAAGAGACCCAGTGCTTCAATTGGCTGTATAAAGTGAAATTGATGCTTTaGGCTTGCAAATCAGTGATG | + |
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Preference number: 2 (lower is better) Translates to: IAIKFKHKETQCFNWLYKVKLML*ACKSVM Trigger: CATCACTGATTTGCAAGCCCAAAGCATCAATTTCAC...TTTATACAGCCAATTGAAGCACTGGGTCTCTTTGTGTTTGAACTTAATGGCAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| 3UTR CCA 72 bp | GGCGGTGACGGCTGTCACCGCAATAACCTCCAACACTaGGTACCTGCCCAGCCTGGTGGTCTTACGCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: GGDGCHRNNLQH*VPAQPGGLTPP Trigger: AGGAGGCGTAAGACCACCAGGCTGGGCAGGTACCCAGTGTTGGAGGTTATTGCGGTGACAGCCGTCACCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR CAA 90 bp | CTGAAGAGCACACCTCCTATCGGAGCACCAAAGGCCACAGAGACACCAGCAGCAGGCTCCAGGGTCCCCTaGTGGCTGGCACTGGTCGTA | + |
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Preference number: 3 (lower is better) Translates to: LKSTPPIGAPKATETPAAGSRVP*WLALVV Trigger: TACGACCAGTGCCAGCCACAAGGGGACCCTGGAGCC...TGCTGCTGGTGTCTCTGTGGCCTTTGGTGCTCCGATAGGAGGTGTGCTCTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR TCA 72 bp | CCAGTCCCATCAAGGTATCTGGGTCAAGATGGAGTCTaGATGTTTCTGGCTCCAGGGTCCCCTTGTGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: PVPSRYLGQDGV*MFLAPGSPCGW Trigger: CCAGCCACAAGGGGACCCTGGAGCCAGAAACATTCAGACTCCATCTTGACCCAGATACCTTGATGGGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR CCA 72 bp | CAAGGTATCTGGGTCAAGATGGAGTCTGAATGTTTCTaGCTCCAGGGTCCCCTTGTGGCTGGCACTGGTCGT | + |
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Preference number: 3 (lower is better) Translates to: QGIWVKMESECF*LQGPLVAGTGR Trigger: ACGACCAGTGCCAGCCACAAGGGGACCCTGGAGCCAGAAACATTCAGACTCCATCTTGACCCAGATACCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR TCA 72 bp | GAATGTCATCCACAGGCCGAGTCATGTTGGGGTCGTTaGTGTAGTCACAGAGCTGAGAAGACTCGAGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: ECHPQAESCWGR*CSHRAEKTREP Trigger: GGGCTCTCGAGTCTTCTCAGCTCTGTGACTACATCAACGACCCCAACATGACTCGGCCTGTGGATGACATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR CCA 72 bp | ATGTTTCTGGCTCCAGGGTCCCCTTGTGGCTGGCACTaGTCGTATTTCTACCCCAGGTATCTGCCATTGTCA | + |
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Preference number: 3 (lower is better) Translates to: MFLAPGSPCGWH*SYFYPRYLPLS Trigger: TGACAATGGCAGATACCTGGGGTAGAAATACGACCAGTGCCAGCCACAAGGGGACCCTGGAGCCAGAAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR CAA 90 bp | TGGTCTCGTTGGAGGTCCAACAGCACTGTTCATGGCTGTACCAGAATGCGGACAGCGTCCAGCAGGCTCTaGATGAACTCCCAAATAGAC | + |
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Preference number: 3 (lower is better) Translates to: WSRWRSNSTVHGCTRMRTASSRL*MNSQID Trigger: GTCTATTTGGGAGTTCATCAAGAGCCTGCTGGACGC...TGTCCGCATTCTGGTACAGCCATGAACAGTGCTGTTGGACCTCCAACGAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209916.2 |
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| 3UTR TCA 72 bp | TCTTACGCCTCCTGCACCAAGCAATGTTGCAGCGTGTaGAGAGGGTTCCCCATAAACCCCCAAAGACTCCAA | + |
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Preference number: 3 (lower is better) Translates to: SYASCTKQCCSV*RGFPINPQRLQ Trigger: TTGGAGTCTTTGGGGGTTTATGGGGAACCCTCTTCACACGCTGCAACATTGCTTGGTGCAGGAGGCGTAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR CAA 90 bp | CTCGTTGGAGGTCCAACAGCACTGTTCATGGCTGTACCAGAATGCGGACAGACACCCAGGTATCTGCCATaGTCACTCTCAGTCTTTTTC | + |
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Preference number: 3 (lower is better) Translates to: LVGGPTALFMAVPECGQTPRYLP*SLSVFF Trigger: GAAAAAGACTGAGAGTGACAATGGCAGATACCTGGG...TGTCTGTCCGCATTCTGGTACAGCCATGAACAGTGCTGTTGGACCTCCAACGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCCCCATAAACCCCCAAAGACTCCAAGCAGGATGAAAGGGAAGAGTTCAGCCTCAAAAGTGGTCTCGTaGGAGGTCCAACAGCACTGT | + |
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Preference number: 3 (lower is better) Translates to: VPHKPPKTPSRMKGKSSASKVVS*EVQQHC Trigger: ACAGTGCTGTTGGACCTCCAACGAGACCACTTTTGA...GGCTGAACTCTTCCCTTTCATCCTGCTTGGAGTCTTTGGGGGTTTATGGGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCCCCATAAACCCCCAAAGACTCCAAGCAGGATGAAAGGGAAGAGTTCAGCCAGCACCTCACGCCTCTaGCCTTCATTCTTGCTATAC | + |
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Preference number: 3 (lower is better) Translates to: VPHKPPKTPSRMKGKSSASTSRL*PSFLLY Trigger: GTATAGCAAGAATGAAGGCAAGAGGCGTGAGGTGCT...GGCTGAACTCTTCCCTTTCATCCTGCTTGGAGTCTTTGGGGGTTTATGGGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR TCA 72 bp | GGGTTCCCCATAAACCCCCAAAGACTCCAAGCAGGATaGAAGGGAAGAGTTCAGCCATGTACCAGGGTGTAT | + |
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Preference number: 3 (lower is better) Translates to: GFPINPQRLQAG*KGRVQPCTRVY Trigger: ATACACCCTGGTACATGGCTGAACTCTTCCCTTTCATCCTGCTTGGAGTCTTTGGGGGTTTATGGGGAACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR TCA 72 bp | CCTCAGGAAACGACGAGACTGAGGAGACGGATGCAATaGAGCCACCAGATTCCCAGTCACATTTTTCATGCA | + |
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Preference number: 3 (lower is better) Translates to: PQETTRLRRRMQ*SHQIPSHIFHA Trigger: TGCATGAAAAATGTGACTGGGAATCTGGTGGCTTCATTGCATCCGTCTCCTCAGTCTCGTCGTTTCCTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR CCA 72 bp | AATGACAGCTCCAGACTCCAGTCCCATCAAGGTATCTaGGTCAAGATGGAGTCTGAATGTTTCTGGCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: NDSSRLQSHQGI*VKMESECFWLQ Trigger: CTGGAGCCAGAAACATTCAGACTCCATCTTGACCCAGATACCTTGATGGGACTGGAGTCTGGAGCTGTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR GCA 72 bp | ACAGTCCTGGACTGGCCATGTCCCAGGTTTCTTAGGTaGACTGTCAGGATCTATTACATACAGTCAAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: TVLDWPCPRFLR*TVRIYYIQSSA Trigger: TGCACTTGACTGTATGTAATAGATCCTGACAGTGCACCTAAGAAACCTGGGACATGGCCAGTCCAGGACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| 3UTR GCA 72 bp | GTGGCTGGCACTGGTCGTATTTCTACCCCAGGTATCTaGCATTGTCACTCTCAGTCTTTTTCTCTGCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: VAGTGRISTPGI*HCHSQSFSLLS Trigger: AGAAAGCAGAGAAAAAGACTGAGAGTGACAATGGCAGATACCTGGGGTAGAAATACGACCAGTGCCAGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR-3UTR CAA 90 bp | GTGAAATTGATGCTTTGGGCTTGCAAATCAGTGATGACGCAAGTGTCCCCTCAACATGCGAATACCCCTTaGTCTTTTGGACTCAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: VKLMLWACKSVMTQVSPQHANTP*SFGLKA Trigger: AGCTTTGAGTCCAAAAGACAAAGGGGTATTCGCATG...TTGAGGGGACACTTGCGTCATCACTGATTTGCAAGCCCAAAGCATCAATTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| 3UTR CCA 72 bp | ATAGAATGTACATTAAGTAATTCAGAATGTAAGCGCTaGCGCCCTCTGACTGGCTCAGAAGAAGCTCTGACC | + |
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Preference number: 3 (lower is better) Translates to: IECTLSNSECKR*RPLTGSEEALT Trigger: GGTCAGAGCTTCTTCTGAGCCAGTCAGAGGGCGCCAGCGCTTACATTCTGAATTACTTAATGTACATTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| 3UTR CCA 72 bp | GTTCCCACTGAGAACTCATATGCCTCACTCTCATCATaGCTCTATCTGGAAGACCTGAGAAGAAAGTTAAGT | + |
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Preference number: 3 (lower is better) Translates to: VPTENSYASLSS*LYLEDLRRKLS Trigger: ACTTAACTTTCTTCTCAGGTCTTCCAGATAGAGCCATGATGAGAGTGAGGCATATGAGTTCTCAGTGGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| 3UTR GCA 72 bp | ATGGGGCATATAACAGATTTCCAGCCAATGGTTGTATaGTGCGCATCTCTGGGAAAGATATACACATTCATC | + |
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Preference number: 3 (lower is better) Translates to: MGHITDFQPMVV*CASLGKIYTFI Trigger: GATGAATGTGTATATCTTTCCCAGAGATGCGCAGCATACAACCATTGGCTGGAAATCTGTTATATGCCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| 3UTR CAA 72 bp | AGCCTGGTGGTCTTACGCCTCCTGCACCAAGCAATGTaGCAGCGTGTGAAGAGGGTTCCCCATAAACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLVVLRLLHQAM*QRVKRVPHKPP Trigger: TGGGGGTTTATGGGGAACCCTCTTCACACGCTGCAACATTGCTTGGTGCAGGAGGCGTAAGACCACCAGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
||
| 3UTR CAA 72 bp | TTTGCTGGTGATCTGACAAGGAAGGACACAGAGCGATaGATCAGAACGCATCGTCCGGGTCACGCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FAGDLTRKDTER*IRTHRPGHASS Trigger: GGACGAGGCGTGACCCGGACGATGCGTTCTGATCAATCGCTCTGTGTCCTTCCTTGTCAGATCACCAGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAATTGATGCTTTGGGCTTGCAAATCAGTGATGACGCAAGTGTCCCCTCAACCACCCACTTGCTGGTaGCAGCAGCTGCCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKLMLWACKSVMTQVSPQPPTCW*QQLPSG Trigger: CCCTGATGGCAGCTGCTGTCACCAGCAAGTGGGTGG...TTGAGGGGACACTTGCGTCATCACTGATTTGCAAGCCCAAAGCATCAATTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| 3UTR CAA 72 bp | AGGCCAGAGGATACGACGAGCACGAGGGTGACAGTCTaGATTAGAAGAGTCCATTTCCCCAAGTATCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPEDTTSTRVTV*IRRVHFPKYPL Trigger: CAGGGGATACTTGGGGAAATGGACTCTTCTAATCAAGACTGTCACCCTCGTGCTCGTCGTATCCTCTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAATTGATGCTTTGGGCTTGCAAATCAGTGATGACGCAAGTGTCCCCTCAAGCGCCTCAGCTTCAGTaGATGTGGGCTGTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKLMLWACKSVMTQVSPQAPQLQ*MWAVGR Trigger: CCTGCCAACAGCCCACATCCACTGAAGCTGAGGCGC...TTGAGGGGACACTTGCGTCATCACTGATTTGCAAGCCCAAAGCATCAATTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCTCGTTGGAGGTCCAACAGCACTGTTCATGGCTGTACCAGAATGCGGACAAGCTTTGTGGAACGATaGGCAAGGACCTCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSRWRSNSTVHGCTRMRTSFVER*ARTSSA Trigger: TGCTGAAGAGGTCCTTGCCCATCGTTCCACAAAGCT...TGTCCGCATTCTGGTACAGCCATGAACAGTGCTGTTGGACCTCCAACGAGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
||
| CDS-3UTR CCA 90 bp | ATGACAGATACCAATCCCACTTCCCTATCCACAGAATCGAAATTCCATCCAGAAGGCGAGTGTAGGGATTaGGGTAGGCCACGATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MTDTNPTSLSTESKFHPEGECRD*GRPRWR Trigger: CCGCCATCGTGGCCTACCCCAATCCCTACACTCGCC...TTCTGGATGGAATTTCGATTCTGTGGATAGGGAAGTGGGATTGGTATCTGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | GTGAAATTGATGCTTTGGGCTTGCAAATCAGTGATGACGCAAGTGTCCCCTCAACAGCTTCAGTGGATGTaGGCTGTTGGCAGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VKLMLWACKSVMTQVSPQQLQWM*AVGRQL Trigger: GAGCTGCCTGCCAACAGCCCACATCCACTGAAGCTG...TTGAGGGGACACTTGCGTCATCACTGATTTGCAAGCCCAAAGCATCAATTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR GCA 90 bp | GTGAAATTGATGCTTTGGGCTTGCAAATCAGTGATGACGCAAGTGTCCCCTCAAAGCTCTGACCACTTCTaGCACAGGGGACACTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKLMLWACKSVMTQVSPQSSDHF*HRGHLS Trigger: GGACAAGTGTCCCCTGTGGCAGAAGTGGTCAGAGCT...TTGAGGGGACACTTGCGTCATCACTGATTTGCAAGCCCAAAGCATCAATTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR GCA 90 bp | GTGAAATTGATGCTTTGGGCTTGCAAATCAGTGATGACGCAAGTGTCCCCTCAACGTCCTCCACAGTCATaGTGTCCTGGGTTAGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: VKLMLWACKSVMTQVSPQRPPQS*CPGLVP Trigger: CGGTACTAACCCAGGACAGCATGACTGTGGAGGACG...TTGAGGGGACACTTGCGTCATCACTGATTTGCAAGCCCAAAGCATCAATTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | ATACGTGATTCAACGATACCCAATGACAGTAAGATTGAAAAGGAGGAGGATGACACCTGCCCAGCCTGGTaGTCTTACGCCTCCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: IRDSTIPNDSKIEKEEDDTCPAW*SYASCT Trigger: GGTGCAGGAGGCGTAAGACCACCAGGCTGGGCAGGT...GTCATCCTCCTCCTTTTCAATCTTACTGTCATTGGGTATCGTTGAATCACGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | CTCGTTGGAGGTCCAACAGCACTGTTCATGGCTGTACCAGAATGCGGACAGACAATCCCAACCAAGAGATaGAAGCTTTGTGGAACGATG | + |
|
Preference number: 4 (lower is better) Translates to: LVGGPTALFMAVPECGQTIPTKR*KLCGTM Trigger: CATCGTTCCACAAAGCTTCCATCTCTTGGTTGGGAT...TGTCTGTCCGCATTCTGGTACAGCCATGAACAGTGCTGTTGGACCTCCAACGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
||
| CDS-3UTR GCA 90 bp | ATGACAGATACCAATCCCACTTCCCTATCCACAGAATCGAAATTCCATCCAGAAGCCACAGGCATACGGTaGGAACACACGTACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MTDTNPTSLSTESKFHPEATGIR*EHTYQG Trigger: TCCCTGGTACGTGTGTTCGCACCGTATGCCTGTGGC...TTCTGGATGGAATTTCGATTCTGTGGATAGGGAAGTGGGATTGGTATCTGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR GCA 90 bp | TCTAACAGTAGCATGCGAATACCCCTTTGTCTTTTGGACTCAAAGCTTCATGTGGTTGCCACAGCAACATaGCACATGCACCAGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SNSSMRIPLCLLDSKLHVVATAT*HMHQWA Trigger: GGCCCACTGGTGCATGTGGCATGTTGCTGTGGCAAC...CACATGAAGCTTTGAGTCCAAAAGACAAAGGGGTATTCGCATGCTACTGTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | TCTAACAGTAGCATGCGAATACCCCTTTGTCTTTTGGACTCAAAGCTTCATGTGTGCCACATGCACCAGTaGGCCCTCTTTGCCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNSSMRIPLCLLDSKLHVCHMHQ*ALFAKA Trigger: AGCCTTGGCAAAGAGGGCCCACTGGTGCATGTGGCA...CACATGAAGCTTTGAGTCCAAAAGACAAAGGGGTATTCGCATGCTACTGTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| 3UTR CAA 72 bp | AGCACCTCACGCCTCTTGCCTTCATTCTTGCTATACTaGGAGAAAAGGCTGCTGAAGAAGTTGCCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: STSRLLPSFLLY*EKRLLKKLPQQ Trigger: TTGCTGTGGCAACTTCTTCAGCAGCCTTTTCTCCAAGTATAGCAAGAATGAAGGCAAGAGGCGTGAGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
||
| CDS-3UTR GCA 90 bp | ATACGTGATTCAACGATACCCAATGACAGTAAGATTGAAAAGGAGGAGGATGACCCAACACTGGGTACCTaGCCAGCCTGGTGGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: IRDSTIPNDSKIEKEEDDPTLGT*PAWWSY Trigger: GTAAGACCACCAGGCTGGGCAGGTACCCAGTGTTGG...GTCATCCTCCTCCTTTTCAATCTTACTGTCATTGGGTATCGTTGAATCACGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | ATACGTGATTCAACGATACCCAATGACAGTAAGATTGAAAAGGAGGAGGATGACCTGGCGCCCTCTGACTaGCTCAGAAGAAGCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IRDSTIPNDSKIEKEEDDLAPSD*LRRSSD Trigger: GTCAGAGCTTCTTCTGAGCCAGTCAGAGGGCGCCAG...GTCATCCTCCTCCTTTTCAATCTTACTGTCATTGGGTATCGTTGAATCACGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | GTGAAATTGATGCTTTGGGCTTGCAAATCAGTGATGACGCAAGTGTCCCCTCAATCCTGGTTTGCCATCTaGGCCATGTGTCTCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VKLMLWACKSVMTQVSPQSWFAI*AMCLRT Trigger: TGTTCTGAGACACATGGCCCAGATGGCAAACCAGGA...TTGAGGGGACACTTGCGTCATCACTGATTTGCAAGCCCAAAGCATCAATTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | GAATGTACATTAAGTAATTCAGAATGTAAGCGCTGGCGCCCTCTGACTGGCTCAGAGATGGAAGCTTTGTaGAACGATGGGCAAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: ECTLSNSECKRWRPLTGSEMEAL*NDGQGP Trigger: AGGTCCTTGCCCATCGTTCCACAAAGCTTCCATCTC...TGAGCCAGTCAGAGGGCGCCAGCGCTTACATTCTGAATTACTTAATGTACATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
||
| CDS-3UTR GCA 90 bp | ATATCAACCTTGAGTAAATGTGCCAATGTTTCCTGTGTTCCATGTCTTTGTATACCAGTGGGCCCTCTTTaGCAAGGCTCAGGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISTLSKCANVSCVPCLCIPVGPL*QGSGQR Trigger: CCTCTGGCCTGAGCCTTGGCAAAGAGGGCCCACTGG...TATACAAAGACATGGAACACAGGAAACATTGGCACATTTACTCAAGGTTGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR GCA 90 bp | TCTAACAGTAGCATGCGAATACCCCTTTGTCTTTTGGACTCAAAGCTTCATGTGTGGAATTGCTCACAATaGCCTCTTGCCTCTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNSSMRIPLCLLDSKLHVWNCSQ*PLASAW Trigger: CCAGGCAGAGGCAAGAGGGCATTGTGAGCAATTCCA...CACATGAAGCTTTGAGTCCAAAAGACAAAGGGGTATTCGCATGCTACTGTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCCATTAAGTTCAAACACAAAGAGACCCAGTGCTTCAATTGGCTGTATAAAGACAGACCCCCTCCTTaGGGTCCGTCATCCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: IAIKFKHKETQCFNWLYKDRPPP*GPSSNP Trigger: TGGATTGGATGACGGACCTCAAGGAGGGGGTCTGTC...TTTATACAGCCAATTGAAGCACTGGGTCTCTTTGTGTTTGAACTTAATGGCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCCATTAAGTTCAAACACAAAGAGACCCAGTGCTTCAATTGGCTGTATAAAGCTCAGAAGAAGCTCTaGCCACTTCTGCCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IAIKFKHKETQCFNWLYKAQKKL*PLLPQG Trigger: CCCCTGTGGCAGAAGTGGTCAGAGCTTCTTCTGAGC...TTTATACAGCCAATTGAAGCACTGGGTCTCTTTGTGTTTGAACTTAATGGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCCATTAAGTTCAAACACAAAGAGACCCAGTGCTTCAATTGGCTGTATAAAAGCAGCAGCTGCAGCTaGAAGCACCTCACGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IAIKFKHKETQCFNWLYKSSSCS*KHLTPL Trigger: AAGAGGCGTGAGGTGCTTTCAGCTGCAGCTGCTGCT...TTTATACAGCCAATTGAAGCACTGGGTCTCTTTGTGTTTGAACTTAATGGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR TCA 90 bp | ATGACAGATACCAATCCCACTTCCCTATCCACAGAATCGAAATTCCATCCAGAACAATGTTGCAGCGTGTaGAGAGGGTTCCCCATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: MTDTNPTSLSTESKFHPEQCCSV*RGFPIN Trigger: GTTTATGGGGAACCCTCTTCACACGCTGCAACATTG...TTCTGGATGGAATTTCGATTCTGTGGATAGGGAAGTGGGATTGGTATCTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR TCA 90 bp | ATGACAGATACCAATCCCACTTCCCTATCCACAGAATCGAAATTCCATCCAGAATCATGTTGGGGTCGTTaGTGTAGTCACAGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MTDTNPTSLSTESKFHPESCWGR*CSHRAE Trigger: CTCAGCTCTGTGACTACATCAACGACCCCAACATGA...TTCTGGATGGAATTTCGATTCTGTGGATAGGGAAGTGGGATTGGTATCTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR TCA 90 bp | TATCTAACAGTAGCATGCGAATACCCCTTTGTCTTTTGGACTCAAAGCTTCATGCCAGCGTACGGTGGGTaGACTCATCCTTCACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: YLTVACEYPFVFWTQSFMPAYGG*THPSHQ Trigger: TTGATGTGAAGGATGAGTTCACCCACCGTACGCTGG...CATGAAGCTTTGAGTCCAAAAGACAAAGGGGTATTCGCATGCTACTGTTAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR GCA 90 bp | TCTAACAGTAGCATGCGAATACCCCTTTGTCTTTTGGACTCAAAGCTTCATGTGGCTGGTGACAGCAGCTaGCATCAGGGGTACAATATA | + |
|
Preference number: 4 (lower is better) Translates to: SNSSMRIPLCLLDSKLHVAGDSS*HQGYNI Trigger: TATATTGTACCCCTGATGGCAGCTGCTGTCACCAGC...CACATGAAGCTTTGAGTCCAAAAGACAAAGGGGTATTCGCATGCTACTGTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR GCA 90 bp | ATACGTGATTCAACGATACCCAATGACAGTAAGATTGAAAAGGAGGAGGATGACTTCAGGGTCCTGGTTTaGCATCTGGGCCATGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRDSTIPNDSKIEKEEDDFRVLV*HLGHVS Trigger: AGACACATGGCCCAGATGGCAAACCAGGACCCTGAA...GTCATCCTCCTCCTTTTCAATCTTACTGTCATTGGGTATCGTTGAATCACGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | ATACGTGATTCAACGATACCCAATGACAGTAAGATTGAAAAGGAGGAGGATGACAATAACCTCCAACACTaGGTACCTGCCCAGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IRDSTIPNDSKIEKEEDDNNLQH*VPAQPG Trigger: ACCAGGCTGGGCAGGTACCCAGTGTTGGAGGTTATT...GTCATCCTCCTCCTTTTCAATCTTACTGTCATTGGGTATCGTTGAATCACGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | ATATCAACCTTGAGTAAATGTGCCAATGTTTCCTGTGTTCCATGTCTTTGTATAGTGGATGTGGGCTGTTaGCAGGCAGCTCAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISTLSKCANVSCVPCLCIVDVGC*QAAQEA Trigger: AGCCTCCTGAGCTGCCTGCCAACAGCCCACATCCAC...TATACAAAGACATGGAACACAGGAAACATTGGCACATTTACTCAAGGTTGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR TCA 90 bp | ATATCAACCTTGAGTAAATGTGCCAATGTTTCCTGTGTTCCATGTCTTTGTATACTGCCAGCAGCCCAATaGGTAGCATCACCACCCATC | + |
|
Preference number: 4 (lower is better) Translates to: ISTLSKCANVSCVPCLCILPAAQ*VASPPI Trigger: GATGGGTGGTGATGCTACTCATTGGGCTGCTGGCAG...TATACAAAGACATGGAACACAGGAAACATTGGCACATTTACTCAAGGTTGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR TCA 90 bp | ATATCAACCTTGAGTAAATGTGCCAATGTTTCCTGTGTTCCATGTCTTTGTATACCACAGCGAGATCGATaGCTCCAGCCAAGGTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISTLSKCANVSCVPCLCIPQRDR*LQPRYL Trigger: CAGGTACCTTGGCTGGAGTCATCGATCTCGCTGTGG...TATACAAAGACATGGAACACAGGAAACATTGGCACATTTACTCAAGGTTGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | TCTAACAGTAGCATGCGAATACCCCTTTGTCTTTTGGACTCAAAGCTTCATGTGCAAAAGTGGTCTCGTTaGAGGTCCAACAGCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SNSSMRIPLCLLDSKLHVQKWSR*RSNSTV Trigger: AACAGTGCTGTTGGACCTCCAACGAGACCACTTTTG...CACATGAAGCTTTGAGTCCAAAAGACAAAGGGGTATTCGCATGCTACTGTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR TCA 90 bp | TATCTAACAGTAGCATGCGAATACCCCTTTGTCTTTTGGACTCAAAGCTTCATGCCTTACTTTTGCTGGTaGTCTTCCTATGTCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: YLTVACEYPFVFWTQSFMPYFCW*SSYVCR Trigger: CCGACAGACATAGGAAGATCACCAGCAAAAGTAAGG...CATGAAGCTTTGAGTCCAAAAGACAAAGGGGTATTCGCATGCTACTGTTAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCAAAATTACGAATATCAACCTTGAGTAAATGTGCCAATGTTTCCTGTGTTCAGCAACATGCCACATaGACCAGTGGGCCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPKLRISTLSKCANVSCVQQHAT*TSGPSL Trigger: CAAAGAGGGCCCACTGGTGCATGTGGCATGTTGCTG...AACACAGGAAACATTGGCACATTTACTCAAGGTTGATATTCGTAATTTTGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCCATTAAGTTCAAACACAAAGAGACCCAGTGCTTCAATTGGCTGTATAAACCCTGTCCTCAAAAGTaGTCTCGTTGGAGGTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IAIKFKHKETQCFNWLYKPCPQK*SRWRSN Trigger: GTTGGACCTCCAACGAGACCACTTTTGAGGACAGGG...TTTATACAGCCAATTGAAGCACTGGGTCTCTTTGTGTTTGAACTTAATGGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCCATTAAGTTCAAACACAAAGAGACCCAGTGCTTCAATTGGCTGTATAAAGGGGATGAAGAGACCTaGGGGAATCTTCATGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IAIKFKHKETQCFNWLYKGDEET*GNLHAK Trigger: TTTGGCATGAAGATTCCCTCAGGTCTCTTCATCCCC...TTTATACAGCCAATTGAAGCACTGGGTCTCTTTGTGTTTGAACTTAATGGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR GCA 90 bp | ATACGTGATTCAACGATACCCAATGACAGTAAGATTGAAAAGGAGGAGGATGACTATTTTGAAGATCAGTaGCAAGGCCAGCTGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: IRDSTIPNDSKIEKEEDDYFEDQ*QGQLPH Trigger: ATGTGGCAGCTGGCCTTGGCACTGATCTTCAAAATA...GTCATCCTCCTCCTTTTCAATCTTACTGTCATTGGGTATCGTTGAATCACGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCCATTAAGTTCAAACACAAAGAGACCCAGTGCTTCAATTGGCTGTATAAACAACAGCACTGTTCATaGCTGTACCAGAATGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IAIKFKHKETQCFNWLYKQQHCS*LYQNAD Trigger: GTCCGCATTCTGGTACAGCCATGAACAGTGCTGTTG...TTTATACAGCCAATTGAAGCACTGGGTCTCTTTGTGTTTGAACTTAATGGCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| 3UTR CAA 72 bp | TCAATGAGCCCACAGCCTTTACTATATAACTGCATTTaGTACCATTCCAGTGTACTGAATGCCAAGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SMSPQPLLYNCI*YHSSVLNAKWM Trigger: CATCCACTTGGCATTCAGTACACTGGAATGGTACAAAATGCAGTTATATAGTAAAGGCTGTGGGCTCATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
||
| CDS-3UTR TCA 90 bp | ACTCCAAAATTACGAATATCAACCTTGAGTAAATGTGCCAATGTTTCCTGTGTTAGACTCCAAGCAGGATaGAAGGGAAGAGTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPKLRISTLSKCANVSCVRLQAG*KGRVQP Trigger: TGGCTGAACTCTTCCCTTTCATCCTGCTTGGAGTCT...AACACAGGAAACATTGGCACATTTACTCAAGGTTGATATTCGTAATTTTGGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCAAAATTACGAATATCAACCTTGAGTAAATGTGCCAATGTTTCCTGTGTTTCTTTATCTCGGGTATaGCAGAGCCACAGGCATACG | + |
|
Preference number: 4 (lower is better) Translates to: TPKLRISTLSKCANVSCVSLSRV*QSHRHT Trigger: CGTATGCCTGTGGCTCTGGCATACCCGAGATAAAGA...AACACAGGAAACATTGGCACATTTACTCAAGGTTGATATTCGTAATTTTGGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCCATTAAGTTCAAACACAAAGAGACCCAGTGCTTCAATTGGCTGTATAAAACAGTCATGCTGTCCTaGGTTAGTACCGATAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: IAIKFKHKETQCFNWLYKTVMLS*VSTDNG Trigger: GCCATTATCGGTACTAACCCAGGACAGCATGACTGT...TTTATACAGCCAATTGAAGCACTGGGTCTCTTTGTGTTTGAACTTAATGGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
||
| CDS-3UTR GCA 90 bp | ATATCAACCTTGAGTAAATGTGCCAATGTTTCCTGTGTTCCATGTCTTTGTATAGCACCTCACGCCTCTTaGCTTCATTCTTGCTATACT | + |
|
Preference number: 4 (lower is better) Translates to: ISTLSKCANVSCVPCLCIAPHAS*LHSCYT Trigger: AGTATAGCAAGAATGAAGGCAAGAGGCGTGAGGTGC...TATACAAAGACATGGAACACAGGAAACATTGGCACATTTACTCAAGGTTGATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS CCA 90 bp | GGCCACGATGGCGGTGACGGCTGTCACCGCAATAACCTCCAACACTaGGTACCTGCCCAGCCTGGTGGTCTTACGCCTCCAGGGTGTATG | + |
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Preference number: 5 (lower is better) Translates to: GHDGGDGCHRNNLQH*VPAQPGGLTPPGCM Trigger: CATACACCCTGGAGGCGTAAGACCACCAGGCTGGGCAGGTACCCAGTGTTGGAGGTTATTGCGGTGACAGCCGTCACCGCCATCGTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210061.2 |
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| CDS CCA 90 bp | TCCTATGTCTGTCGGTATCCCGGGACTTTTCCCTCAGCCAGTCTATaGTGTGGAAGTCCTCGTAGGTCCCCACGTCAGGGAAGGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SYVCRYPGTFPSASL*CGSPRRSPRQGRAP Trigger: AGGAGCCCTTCCCTGACGTGGGGACCTACGAGGACTTCCACACCATAGACTGGCTGAGGGAAAAGTCCCGGGATACCGACAGACATAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000619.8 ENSMUST00000209916.2 ENSMUST00000210061.2 ENSMUST00000210362.2 ENSMUST00000211574.2 |
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| CDS TCA 90 bp | CTCCCCTCCGGGGCCGCATCACATCAGTGGCCAGCGTACGGTGGGTaGACTCATCCTTCACATCAAGAAATGGGTACCCATTCAGATGGA | + |
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Preference number: 5 (lower is better) Translates to: LPSGAASHQWPAYGG*THPSHQEMGTHSDG Trigger: TCCATCTGAATGGGTACCCATTTCTTGATGTGAAGGATGAGTTCACCCACCGTACGCTGGCCACTGATGTGATGCGGCCCCGGAGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000619.8 ENSMUST00000210061.2 ENSMUST00000210594.2 |
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| CDS CCA 90 bp | GGTTCTCCCCTCCGGGGCCGCATCACATCAGTGGCCAGCGTACGGTaGGTGAACTCATCCTTCACATCAAGAAATGGGTACCCATTCAGA | + |
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Preference number: 5 (lower is better) Translates to: GSPLRGRITSVASVR*VNSSFTSRNGYPFR Trigger: TCTGAATGGGTACCCATTTCTTGATGTGAAGGATGAGTTCACCCACCGTACGCTGGCCACTGATGTGATGCGGCCCCGGAGGGGAGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000619.8 ENSMUST00000210061.2 ENSMUST00000210594.2 |
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| CDS-3UTR CAA 90 bp | ATGACAGATACCAATCCCACTTCCCTATCCACAGAATCGAAATTCCATCCAGAAAGTGGATGTGGGCTGTaGGCAGGCAGCTCAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: MTDTNPTSLSTESKFHPESGCGL*AGSSGG Trigger: GCCTCCTGAGCTGCCTGCCAACAGCCCACATCCACT...TTCTGGATGGAATTTCGATTCTGTGGATAGGGAAGTGGGATTGGTATCTGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ATACGTGATTCAACGATACCCAATGACAGTAAGATTGAAAAGGAGGAGGATGACAGACAGACCCCCTCCTaGAGGTCCGTCATCCAATCC | + |
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Preference number: 5 (lower is better) Translates to: IRDSTIPNDSKIEKEEDDRQTPS*RSVIQS Trigger: GGATTGGATGACGGACCTCAAGGAGGGGGTCTGTCT...GTCATCCTCCTCCTTTTCAATCTTACTGTCATTGGGTATCGTTGAATCACGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ATTGCCATTAAGTTCAAACACAAAGAGACCCAGTGCTTCAATTGGCTGTATAAACCGTGTCACCAGGCATaGTCGGAGCCCCAGTTTCCG | + |
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Preference number: 5 (lower is better) Translates to: IAIKFKHKETQCFNWLYKPCHQA*SEPQFP Trigger: CGGAAACTGGGGCTCCGACAATGCCTGGTGACACGG...TTTATACAGCCAATTGAAGCACTGGGTCTCTTTGTGTTTGAACTTAATGGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ATGACAGATACCAATCCCACTTCCCTATCCACAGAATCGAAATTCCATCCAGAAATTCAGGGTCCTGGTTaGCCATCTGGGCCATGTGTC | + |
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Preference number: 5 (lower is better) Translates to: MTDTNPTSLSTESKFHPEIQGPG*PSGPCV Trigger: GACACATGGCCCAGATGGCAAACCAGGACCCTGAAT...TTCTGGATGGAATTTCGATTCTGTGGATAGGGAAGTGGGATTGGTATCTGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ATGACAGATACCAATCCCACTTCCCTATCCACAGAATCGAAATTCCATCCAGAAAGGCTGCTGAAGAAGTaGCCACAGCAACATGCCACA | + |
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Preference number: 5 (lower is better) Translates to: MTDTNPTSLSTESKFHPERLLKK*PQQHAT Trigger: TGTGGCATGTTGCTGTGGCAACTTCTTCAGCAGCCT...TTCTGGATGGAATTTCGATTCTGTGGATAGGGAAGTGGGATTGGTATCTGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ATGACAGATACCAATCCCACTTCCCTATCCACAGAATCGAAATTCCATCCAGAAGCTCACAATGCCCTCTaGCCTCTGCCTGGCATTTTT | + |
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Preference number: 5 (lower is better) Translates to: MTDTNPTSLSTESKFHPEAHNAL*PLPGIF Trigger: AAAAATGCCAGGCAGAGGCAAGAGGGCATTGTGAGC...TTCTGGATGGAATTTCGATTCTGTGGATAGGGAAGTGGGATTGGTATCTGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ATACGTGATTCAACGATACCCAATGACAGTAAGATTGAAAAGGAGGAGGATGACGCGTCCAGCAGGCTCTaGATGAACTCCCAAATAGAC | + |
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Preference number: 5 (lower is better) Translates to: IRDSTIPNDSKIEKEEDDASSRL*MNSQID Trigger: GTCTATTTGGGAGTTCATCAAGAGCCTGCTGGACGC...GTCATCCTCCTCCTTTTCAATCTTACTGTCATTGGGTATCGTTGAATCACGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | TCTAACAGTAGCATGCGAATACCCCTTTGTCTTTTGGACTCAAAGCTTCATGTGTCAAAAGTGGTCTCGTaGGAGGTCCAACAGCACTGT | + |
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Preference number: 5 (lower is better) Translates to: SNSSMRIPLCLLDSKLHVSKVVS*EVQQHC Trigger: ACAGTGCTGTTGGACCTCCAACGAGACCACTTTTGA...CACATGAAGCTTTGAGTCCAAAAGACAAAGGGGTATTCGCATGCTACTGTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ATACGTGATTCAACGATACCCAATGACAGTAAGATTGAAAAGGAGGAGGATGACCTATTTCCAAAGGGGTaGATGGAGCGCAGTGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: IRDSTIPNDSKIEKEEDDLFPKG*MERSVK Trigger: CTTCACACTGCGCTCCATCAACCCCTTTGGAAATAG...GTCATCCTCCTCCTTTTCAATCTTACTGTCATTGGGTATCGTTGAATCACGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ATTGCCATTAAGTTCAAACACAAAGAGACCCAGTGCTTCAATTGGCTGTATAAAAGAGCCCCACAATCGTaGAAGAGCTCAGAGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: IAIKFKHKETQCFNWLYKRAPQS*KSSEMS Trigger: GCTCATCTCTGAGCTCTTCAACGATTGTGGGGCTCT...TTTATACAGCCAATTGAAGCACTGGGTCTCTTTGTGTTTGAACTTAATGGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ATGACAGATACCAATCCCACTTCCCTATCCACAGAATCGAAATTCCATCCAGAACTCTTGCCTTCATTCTaGCTATACTTGGAGAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: MTDTNPTSLSTESKFHPELLPSF*LYLEKR Trigger: CCTTTTCTCCAAGTATAGCAAGAATGAAGGCAAGAG...TTCTGGATGGAATTTCGATTCTGTGGATAGGGAAGTGGGATTGGTATCTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ACTCCAAAATTACGAATATCAACCTTGAGTAAATGTGCCAATGTTTCCTGTGTTCTGCACCAAGCAATGTaGCAGCGTGTGAAGAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: TPKLRISTLSKCANVSCVLHQAM*QRVKRV Trigger: AACCCTCTTCACACGCTGCAACATTGCTTGGTGCAG...AACACAGGAAACATTGGCACATTTACTCAAGGTTGATATTCGTAATTTTGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ACTCCAAAATTACGAATATCAACCTTGAGTAAATGTGCCAATGTTTCCTGTGTTAGCACCTCACGCCTCTaGCCTTCATTCTTGCTATAC | + |
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Preference number: 5 (lower is better) Translates to: TPKLRISTLSKCANVSCVSTSRL*PSFLLY Trigger: GTATAGCAAGAATGAAGGCAAGAGGCGTGAGGTGCT...AACACAGGAAACATTGGCACATTTACTCAAGGTTGATATTCGTAATTTTGGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ATTGCCATTAAGTTCAAACACAAAGAGACCCAGTGCTTCAATTGGCTGTATAAAAAGTACATGATGGAATaGCTCACAATGCCCTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: IAIKFKHKETQCFNWLYKKYMME*LTMPSC Trigger: GCAAGAGGGCATTGTGAGCAATTCCATCATGTACTT...TTTATACAGCCAATTGAAGCACTGGGTCTCTTTGTGTTTGAACTTAATGGCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ACTCCAAAATTACGAATATCAACCTTGAGTAAATGTGCCAATGTTTCCTGTGTTTCATTCTTGCTATACTaGGAGAAAAGGCTGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: TPKLRISTLSKCANVSCVSFLLY*EKRLLK Trigger: CTTCAGCAGCCTTTTCTCCAAGTATAGCAAGAATGA...AACACAGGAAACATTGGCACATTTACTCAAGGTTGATATTCGTAATTTTGGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS-3UTR CAA 90 bp | ATATCAACCTTGAGTAAATGTGCCAATGTTTCCTGTGTTCCATGTCTTTGTATAATAGTAATGACTATTTaGAAGATCAGTGCCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: ISTLSKCANVSCVPCLCIIVMTI*KISAKA Trigger: GGCCTTGGCACTGATCTTCAAAATAGTCATTACTAT...TATACAAAGACATGGAACACAGGAAACATTGGCACATTTACTCAAGGTTGATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000619.8 |
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| CDS CCA 72 bp | GGCGGTGACGGCTGTCACCGCAATAACCTCCAACACTaGGTACCTGCCCAGCCTGGTGGTCTTACGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GGDGCHRNNLQH*VPAQPGGLTPP Trigger: TGGAGGCGTAAGACCACCAGGCTGGGCAGGTACCCAGTGTTGGAGGTTATTGCGGTGACAGCCGTCACCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210061.2 |
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| CDS CCA 72 bp | GAAAGGGCTCAGGTTCAAAATGCGCCTCAGCTTCAGTaGATGTGGGCTGTTGGCAGGCAGCTCAGGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ERAQVQNAPQLQ*MWAVGRQLRRL Trigger: GAGCCTCCTGAGCTGCCTGCCAACAGCCCACATCCACTGAAGCTGAGGCGCATTTTGAACCTGAGCCCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000619.8 ENSMUST00000210061.2 ENSMUST00000210594.2 |
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| CDS CCA 72 bp | CTCCGGGGCCGCATCACATCAGTGGCCAGCGTACGGTaGGTGAACTCATCCTTCACATCAAGAAATGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: LRGRITSVASVR*VNSSFTSRNGY Trigger: GTACCCATTTCTTGATGTGAAGGATGAGTTCACCCACCGTACGCTGGCCACTGATGTGATGCGGCCCCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000619.8 ENSMUST00000210061.2 ENSMUST00000210594.2 |
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| CDS CAA 72 bp | GATCCCAAGAAGTCTCCCACTCCGTGTCACCAGGCATaGTCGGAGCCCCAGTTTCCGGAAAATGTCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: DPKKSPTPCHQA*SEPQFPENVHH Trigger: GTGGTGGACATTTTCCGGAAACTGGGGCTCCGACAATGCCTGGTGACACGGAGTGGGAGACTTCTTGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000619.8 ENSMUST00000210061.2 ENSMUST00000210594.2 |
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| CDS CCA 72 bp | ACATCCCAACCAAGAGATGGAAGCTTTGTGGAACGATaGGCAAGGACCTCTTCAGCACAGGATCGCCCACCT | + |
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Preference number: 6 (lower is better) Translates to: TSQPRDGSFVER*ARTSSAQDRPP Trigger: AGGTGGGCGATCCTGTGCTGAAGAGGTCCTTGCCCATCGTTCCACAAAGCTTCCATCTCTTGGTTGGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211574.2 |
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| CDS CAA 72 bp | ATCACCACCCATCCCGACCACGCGTCCAGCAGGCTCTaGATGAACTCCCAAATAGACTCCTTACTTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: ITTHPDHASSRL*MNSQIDSLLLL Trigger: CAGCAAAAGTAAGGAGTCTATTTGGGAGTTCATCAAGAGCCTGCTGGACGCGTGGTCGGGATGGGTGGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000619.8 ENSMUST00000210061.2 |
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| CDS CAA 90 bp | ATGAGTAGCATCACCACCCATCCCGACCACGCGTCCAGCAGGCTCTaGATGAACTCCCAAATAGACTCCTTACTTTTGCTGGTGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: MSSITTHPDHASSRL*MNSQIDSLLLLVIF Trigger: GAAGATCACCAGCAAAAGTAAGGAGTCTATTTGGGAGTTCATCAAGAGCCTGCTGGACGCGTGGTCGGGATGGGTGGTGATGCTACTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000619.8 ENSMUST00000210061.2 |
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