Pregenerated sensors for CLCN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004319Ensembl transcript IDs: ENSMUST00000004430.14, ENSMUST00000056508.12, ENSMUST00000093490.9, ENSMUST00000110301.2, ENSMUST00000110302.8
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCACACAAGCTGGGAGATTGCATTCACACCTCCAGATTTTCCCTaGTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAGT | + |
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Preference number: 1 (lower is better) Translates to: QHTSWEIAFTPPDFP*LASSGVCTHSQAFS Trigger: ACTAAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGGAGGTGTGAATGCAATCTCCCAGCTTGTGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR TCA 90 bp | CACTGCACTCCTCAGGGAGTGCAGCCAGTGAGGTGCAGAGCAACATaGGATGAATTACTGTTCCAGGTAGCTAGGGAAATACCTCACTCT | + |
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Preference number: 1 (lower is better) Translates to: HCTPQGVQPVRCRAT*DELLFQVAREIPHS Trigger: AGAGTGAGGTATTTCCCTAGCTACCTGGAACAGTAATTCATCTCATGTTGCTCTGCACCTCACTGGCTGCACTCCCTGAGGAGTGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR CCA 90 bp | ACACAAGCTGGGAGATTGCATTCACACCTCCAGATTTTCCCTGCTTaGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAGTGATG | + |
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Preference number: 1 (lower is better) Translates to: TQAGRLHSHLQIFPA*PAVVCAHIPKPLVM Trigger: CATCACTAAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGGAGGTGTGAATGCAATCTCCCAGCTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR TCA 90 bp | TCCTCCTCTTTACAGTCACGGCAGCAGCGCTTGCTTTCGTTATGCTaGACAGCACTTCTCTGTCATAGTAGTCATCTCAGAAATAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: SSSLQSRQQRLLSLC*TALLCHSSHLRNRK Trigger: TTTTCTATTTCTGAGATGACTACTATGACAGAGAAGTGCTGTTCAGCATAACGAAAGCAAGCGCTGCTGCCGTGACTGTAAAGAGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR TCA 90 bp | GAAGGGGGAGGGAGGACAGAGAAGCTCTTTTGGAATGTAGAAAGGTaGTGCGTAACTATACAATTCATGAGTTTAACACAACAGTTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: EGGGRTEKLFWNVER*CVTIQFMSLTQQFW Trigger: CCAGAACTGTTGTGTTAAACTCATGAATTGTATAGTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTCCTCCCTCCCCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR CCA 90 bp | GTGTGTGCACACATTCCCAAGCCTTTAGTGATGGTACAGACTACATaGTTAATGGCACAAGAAACATTCCCTTCTTGTGATGAAACGTCA | + |
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Preference number: 1 (lower is better) Translates to: VCAHIPKPLVMVQTT*LMAQETFPSCDETS Trigger: TGACGTTTCATCACAAGAAGGGAATGTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAATGTGTGCACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR GCA 90 bp | ATCAGCAGTGCTGAAGAGTTCCTACCCCAGCAGTGTCTTCCATACTaGAAGAATACTTTCAGAGCTACAGAACTACCATTAAAAATGAGT | + |
|
Preference number: 1 (lower is better) Translates to: ISSAEEFLPQQCLPY*KNTFRATELPLKMS Trigger: ACTCATTTTTAATGGTAGTTCTGTAGCTCTGAAAGTATTCTTGCAGTATGGAAGACACTGCTGGGGTAGGAACTCTTCAGCACTGCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
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| 3UTR TCA 90 bp | CCTTCTTGTGATGAAACGTCAGTAAAATCACAGTACATCTCAATATaGGAAAGGACTGCTTCAAAAGGACACACCAGAGAGGTTTCGTTA | + |
|
Preference number: 1 (lower is better) Translates to: PSCDETSVKSQYISI*ERTASKGHTREVSL Trigger: TAACGAAACCTCTCTGGTGTGTCCTTTTGAAGCAGTCCTTTCTCATATTGAGATGTACTGTGATTTTACTGACGTTTCATCACAAGAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTAGCCTGCACTCCCACTaGACTCCTCAGGGAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GTDGRLRGGSSLHSHCTPSLHSH*TPQGVQ Trigger: CTGCACTCCCTGAGGAGTGCAGTGGGAGTGCAGGCT...AGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTCAAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGGCGGAGGCTCAAGCCTaGACTCCCACTGCACTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLQKDTPERFRYSSRGRGAEAQA*TPTALL Trigger: GAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGC...CCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTTGAAGCAG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCAATTCAAAGTAGTCCCTCCAGAAGTAGGGACTGTAATGCGTCTCTGTGGTGCGGAGGCTCAAGCCTaGACTCCCACTGCACTCCTC | + |
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Preference number: 2 (lower is better) Translates to: AQFKVVPPEVGTVMRLCGAEAQA*TPTALL Trigger: GAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGC...ACCACAGAGACGCATTACAGTCCCTACTTCTGGAGGGACTACTTTGAATTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGAGGGAGGAGGTGCAGAGCAACATaGGATGAATTACTGTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: KRTHQRGFVTAPEEGGGRRCRAT*DELLFQ Trigger: CTGGAACAGTAATTCATCTCATGTTGCTCTGCACCT...CCTCCCTCCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGAGGGAGGTCTCCCAGCATTATTTaGAAACCGGGTTGCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: KRTHQRGFVTAPEEGGGRSPSII*KPGCKA Trigger: AGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGA...CCTCCCTCCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCTGCTCTCCCAGCATTATTTGCAAACCGGGTTGCAAAGCTCGCCTTGTACCCAAACAATCCCTCTaGTCTCCCAGCATTATTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLCSPSIICKPGCKARLVPKQSL*SPSIIC Trigger: GCAAATAATGCTGGGAGAGCAGAGGGATTGTTTGGG...TACAAGGCGAGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAGCAGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAGTGATGGTACAGACTACTCTCCCAGCATTATTTaGAAACCGGGTTGCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: ASSGVCTHSQAFSDGTDYSPSII*KPGCKA Trigger: AGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGA...GTAGTCTGTACCATCACTAAAGGCTTGGGAATGTGTGCACACACCACTGCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGAGCCTGCACTCCCACTaGACTCCTCAGGGAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQSLHSH*TPQGVQ Trigger: CTGCACTCCCTGAGGAGTGCAGTGGGAGTGCAGGCT...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR CAA 90 bp | AAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATaGCATTCACACCTCCAGATTTTCCCTGCTTGGCCAGCAGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: KFVLDSEPHSTQAGR*HSHLQIFPAWPAVV Trigger: CACCACTGCTGGCCAAGCAGGGAAAATCTGGAGGTGTGAATGCAATCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATTGCCTCCAGATTTTCCCTaGTTGGCCAGCAGTGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: RVKFVLDSEPHSTQAGRLPPDFP*LASSGV Trigger: CACACCACTGCTGGCCAAGCAGGGAAAATCTGGAGG...CAATCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCAATTCAAAGTAGTCCCTCCAGAAGTAGGGACTGTAATGCGTCTCTGTGGTAGGTGCAGAGCAACATaGGATGAATTACTGTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: AQFKVVPPEVGTVMRLCGRCRAT*DELLFQ Trigger: CTGGAACAGTAATTCATCTCATGTTGCTCTGCACCT...ACCACAGAGACGCATTACAGTCCCTACTTCTGGAGGGACTACTTTGAATTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGCAGTGCTGAAGAGTTCCTACCCCAGCAGTGTCTTCCATACTGCAAGAATATCTCCCAGCATTATTTaGAAACCGGGTTGCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: SAVLKSSYPSSVFHTARISPSII*KPGCKA Trigger: AGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGA...TATTCTTGCAGTATGGAAGACACTGCTGGGGTAGGAACTCTTCAGCACTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
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| 3UTR-3UTR GCA 90 bp | GACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACTATACAATTCATAGCCTGCACTCCCACTaGACTCCTCAGGGAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: DREALLECRKVMRNYTIHSLHSH*TPQGVQ Trigger: CTGCACTCCCTGAGGAGTGCAGTGGGAGTGCAGGCT...ATGAATTGTATAGTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | ATTAGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGACCTCCAGATTTTCCCTaGTTGGCCAGCAGTGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: IRVKFVLDSEPHSTQAGRPPDFP*LASSGV Trigger: CACACCACTGCTGGCCAAGCAGGGAAAATCTGGAGG...TCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTTTAACACAACAGTTCTaGTATAAAAGGGCAAGACCT | + |
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Preference number: 2 (lower is better) Translates to: PDFPCLASSGVCTHSQAFLTQQF*YKRARP Trigger: AGGTCTTGCCCTTTTATACCAGAACTGTTGTGTTAA...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAGTGATGGTACAGACTACCAGTACATCTCAATATaGGAAAGGACTGCTTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: ASSGVCTHSQAFSDGTDYQYISI*ERTASK Trigger: TTTTGAAGCAGTCCTTTCTCATATTGAGATGTACTG...GTAGTCTGTACCATCACTAAAGGCTTGGGAATGTGTGCACACACCACTGCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | TGTAGAAAGGTGATGCGTAACTATACAATTCATGAGTTTAACACAACAGTTCTGAGCCTGCACTCCCACTaGACTCCTCAGGGAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: CRKVMRNYTIHEFNTTVLSLHSH*TPQGVQ Trigger: CTGCACTCCCTGAGGAGTGCAGTGGGAGTGCAGGCT...CAGAACTGTTGTGTTAAACTCATGAATTGTATAGTTACGCATCACCTTTCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAGTGCTGAAGAGTTCCTACCCCAGCAGTGTCTTCCATACTGCAAGAATACAACTTTCTAGTTTGTaGTCAAGATGGACAGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: SAVLKSSYPSSVFHTARIQLSSL*SRWTGQ Trigger: TTGACCTGTCCATCTTGACCACAAACTAGAAAGTTG...TATTCTTGCAGTATGGAAGACACTGCTGGGGTAGGAACTCTTCAGCACTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGCAGTGCTGAAGAGTTCCTACCCCAGCAGTGTCTTCCATACTGCAAGAATATCGAATATGGCTTCCTaGTTTTCTAAGTCTTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: SAVLKSSYPSSVFHTARISNMAS*FSKSSR Trigger: TCTTGAAGACTTAGAAAATCAGGAAGCCATATTCGA...TATTCTTGCAGTATGGAAGACACTGCTGGGGTAGGAACTCTTCAGCACTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
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| 3UTR-3UTR CCA 90 bp | GTTTCAGAAAATATCTGTCTGCACAAATGCATTTGGCCTTTGAAAAATGCATACCTGCTTGGCCAGCAGTaGTGTGTGCACACATTCCCA | + |
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Preference number: 2 (lower is better) Translates to: VSENICLHKCIWPLKNAYLLGQQ*CVHTFP Trigger: TGGGAATGTGTGCACACACCACTGCTGGCCAAGCAG...GTATGCATTTTTCAAAGGCCAAATGCATTTGTGCAGACAGATATTTTCTGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
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| 3UTR-3UTR CCA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGACACAGCACACAAGCTaGGAGATTGCATTCACACCT | + |
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Preference number: 2 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQTQHTS*EIAFTP Trigger: AGGTGTGAATGCAATCTCCCAGCTTGTGTGCTGTGT...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTAATGGCACAAGAAACAAGGTGCAGAGCAACATaGGATGAATTACTGTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: IPKPLVMVQTTWLMAQETRCRAT*DELLFQ Trigger: CTGGAACAGTAATTCATCTCATGTTGCTCTGCACCT...TGTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGAAGGTGCAGAGCAACATaGGATGAATTACTGTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: IRVKFVLDSEPHSTQAGRRCRAT*DELLFQ Trigger: CTGGAACAGTAATTCATCTCATGTTGCTCTGCACCT...TCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATTGAAAAGGGCAAGACCTTaGAGTCTTAATAGATGGCTC | + |
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Preference number: 2 (lower is better) Translates to: RVKFVLDSEPHSTQAGRLKRARP*SLNRWL Trigger: GAGCCATCTATTAAGACTGCAAGGTCTTGCCCTTTT...CAATCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTCAGAAAATATCTGTCTGCACAAATGCATTTGGCCTTTGAAAAATGCATACCAGATTTTCCCTGCTTaGCCAGCAGTGGTGTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VSENICLHKCIWPLKNAYQIFPA*PAVVCA Trigger: TGCACACACCACTGCTGGCCAAGCAGGGAAAATCTG...GTATGCATTTTTCAAAGGCCAAATGCATTTGTGCAGACAGATATTTTCTGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGGAACTTTGGATCACTCGAATATGGCTTCCTGATTTTCTAAGTCTTCAAACACAGCACACAAGCTaGGAGATTGCATTCACACCT | + |
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Preference number: 2 (lower is better) Translates to: FGELWITRIWLPDFLSLQTQHTS*EIAFTP Trigger: AGGTGTGAATGCAATCTCCCAGCTTGTGTGCTGTGT...TTGAAGACTTAGAAAATCAGGAAGCCATATTCGAGTGATCCAAAGTTCCCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
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| 3UTR-3UTR GCA 90 bp | ATTAGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGAAAAAGGGCAAGACCTTaGAGTCTTAATAGATGGCTC | + |
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Preference number: 2 (lower is better) Translates to: IRVKFVLDSEPHSTQAGRKRARP*SLNRWL Trigger: GAGCCATCTATTAAGACTGCAAGGTCTTGCCCTTTT...TCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR CCA 90 bp | AACGCATTAAAAACACGTCACTTTTCATGTGTTTCAGCAGTAAGACACATCAGAACACAGCACACAAGCTaGGAGATTGCATTCACACCT | + |
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Preference number: 2 (lower is better) Translates to: NALKTRHFSCVSAVRHIRTQHTS*EIAFTP Trigger: AGGTGTGAATGCAATCTCCCAGCTTGTGTGCTGTGT...TCTGATGTGTCTTACTGCTGAAACACATGAAAAGTGACGTGTTTTTAATGCGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
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| 3UTR-3UTR TCA 90 bp | GACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACTATACAATTCATAGGTGCAGAGCAACATaGGATGAATTACTGTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: DREALLECRKVMRNYTIHRCRAT*DELLFQ Trigger: CTGGAACAGTAATTCATCTCATGTTGCTCTGCACCT...ATGAATTGTATAGTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATTGCAGTACATCTCAATATaGGAAAGGACTGCTTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: RVKFVLDSEPHSTQAGRLQYISI*ERTASK Trigger: TTTTGAAGCAGTCCTTTCTCATATTGAGATGTACTG...CAATCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR-3UTR GCA 90 bp | GACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACTATACAATTCATTCTCCCAGCATTATTTaGAAACCGGGTTGCAAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DREALLECRKVMRNYTIHSPSII*KPGCKA Trigger: AGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGA...ATGAATTGTATAGTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATTGTTAACACAACAGTTCTaGTATAAAAGGGCAAGACCT | + |
|
Preference number: 2 (lower is better) Translates to: RVKFVLDSEPHSTQAGRLLTQQF*YKRARP Trigger: AGGTCTTGCCCTTTTATACCAGAACTGTTGTGTTAA...CAATCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR TCA 90 bp | AACGCATTAAAAACACGTCACTTTTCATGTGTTTCAGCAGTAAGACACATCAGAGTTTGTTTTAGATTCTaGACCACACAGCACACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: NALKTRHFSCVSAVRHIRVCFRF*TTQHTS Trigger: GCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAAC...TCTGATGTGTCTTACTGCTGAAACACATGAAAAGTGACGTGTTTTTAATGCGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| 3UTR-3UTR TCA 90 bp | AACGCATTAAAAACACGTCACTTTTCATGTGTTTCAGCAGTAAGACACATCAGATTGCTTTCGTTATGCTaGACAGCACTTCTCTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: NALKTRHFSCVSAVRHIRLLSLC*TALLCH Trigger: ATGACAGAGAAGTGCTGTTCAGCATAACGAAAGCAA...TCTGATGTGTCTTACTGCTGAAACACATGAAAAGTGACGTGTTTTTAATGCGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| 3UTR-3UTR GCA 90 bp | GACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACTATACAATTCATAAAAGGGCAAGACCTTaGAGTCTTAATAGATGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: DREALLECRKVMRNYTIHKRARP*SLNRWL Trigger: GAGCCATCTATTAAGACTGCAAGGTCTTGCCCTTTT...ATGAATTGTATAGTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CCA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGTTAACACAACAGTTCTaGTATAAAAGGGCAAGACCT | + |
|
Preference number: 2 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQLTQQF*YKRARP Trigger: AGGTCTTGCCCTTTTATACCAGAACTGTTGTGTTAA...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTAGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGAATGGTACAGACTACATaGTTAATGGCACAAGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: IRVKFVLDSEPHSTQAGRMVQTT*LMAQET Trigger: TGTTTCTTGTGCCATTAACCATGTAGTCTGTACCAT...TCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CCA 90 bp | AACGCATTAAAAACACGTCACTTTTCATGTGTTTCAGCAGTAAGACACATCAGAAAGACAAAATATCACTaGCAGACAGCAATTTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: NALKTRHFSCVSAVRHIRKTKYH*QTAILG Trigger: CCCCAAAATTGCTGTCTGCCAGTGATATTTTGTCTT...TCTGATGTGTCTTACTGCTGAAACACATGAAAAGTGACGTGTTTTTAATGCGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| 3UTR-3UTR CCA 90 bp | GACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACTATACAATTCATTTAACACAACAGTTCTaGTATAAAAGGGCAAGACCT | + |
|
Preference number: 2 (lower is better) Translates to: DREALLECRKVMRNYTIHLTQQF*YKRARP Trigger: AGGTCTTGCCCTTTTATACCAGAACTGTTGTGTTAA...ATGAATTGTATAGTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CCA 90 bp | AACGCATTAAAAACACGTCACTTTTCATGTGTTTCAGCAGTAAGACACATCAGATGGATCACTCGAATATaGCTTCCTGATTTTCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NALKTRHFSCVSAVRHIRWITRI*LPDFLS Trigger: ACTTAGAAAATCAGGAAGCCATATTCGAGTGATCCA...TCTGATGTGTCTTACTGCTGAAACACATGAAAAGTGACGTGTTTTTAATGCGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| 3UTR GCA 72 bp | GGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTaGACTCCTCAGGGAGTGCAGCCAGTGAGGTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GRLRGGSSLHSH*TPQGVQPVRCR Trigger: TCTGCACCTCACTGGCTGCACTCCCTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGGGAGTCTCTCCCAGCATTATTaGCAAACCGGGTTGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RTAPRRLKPALPLHSSGSLSQHY*QTGLQS Trigger: GCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAG...ACTCCCTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGGGAGCTCTCCCAGCATTATTaGCAAACCGGGTTGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TDGSAEAQACTPTALLRELSQHY*QTGLQS Trigger: GCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAG...CTCCCTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGCTCTCCCAGCATTATTaGCAAACCGGGTTGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TDGRLRGGSSLHSHCTPQLSQHY*QTGLQS Trigger: GCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAG...CTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR CCA 72 bp | GGGAGATTGCATTCACACCTCCAGATTTTCCCTGCTTaGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GRLHSHLQIFPA*PAVVCAHIPKP Trigger: AGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGGAGGTGTGAATGCAATCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGAGGGAGGCTCTCCCAGCATTATTaGCAAACCGGGTTGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KRTHQRGFVTAPEEGGGRLSQHY*QTGLQS Trigger: GCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAG...CCTCCCTCCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR GCA 72 bp | CCTCCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTaGACACATTCCCAAGCCTTTAGTGATGGTACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PPDFPCLASSGV*THSQAFSDGTD Trigger: GTCTGTACCATCACTAAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAGTGATGGTACAGACTACCTCTCCCAGCATTATTaGCAAACCGGGTTGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ASSGVCTHSQAFSDGTDYLSQHY*QTGLQS Trigger: GCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAG...GTAGTCTGTACCATCACTAAAGGCTTGGGAATGTGTGCACACACCACTGCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATTGCCAGATTTTCCCTGCTaGGCCAGCAGTGGTGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RVKFVLDSEPHSTQAGRLPDFPC*ASSGVC Trigger: GCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG...CAATCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAGTGATGGTACAGACTACGACAGAGAAGCTCTTTaGGAATGTAGAAAGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: ASSGVCTHSQAFSDGTDYDREAL*ECRKVM Trigger: CATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTC...GTAGTCTGTACCATCACTAAAGGCTTGGGAATGTGTGCACACACCACTGCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR TCA 72 bp | TTACAGTCACGGCAGCAGCGCTTGCTTTCGTTATGCTaGACAGCACTTCTCTGTCATAGTAGTCATCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LQSRQQRLLSLC*TALLCHSSHLR Trigger: TCTGAGATGACTACTATGACAGAGAAGTGCTGTTCAGCATAACGAAAGCAAGCGCTGCTGCCGTGACTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCAGTGCTGAAGAGTTCCTACCCCAGCAGTGTCTTCCATACTGCAAGAATAGACAGAGAAGCTCTTTaGGAATGTAGAAAGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: SAVLKSSYPSSVFHTARIDREAL*ECRKVM Trigger: CATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTC...TATTCTTGCAGTATGGAAGACACTGCTGGGGTAGGAACTCTTCAGCACTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATTGGACAGAGAAGCTCTTTaGGAATGTAGAAAGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: RVKFVLDSEPHSTQAGRLDREAL*ECRKVM Trigger: CATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTC...CAATCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGTGTCTTCCATACTGCAAGAATACTTTCAGAGCTACAGAACTACCATTATTGAAAAATGCATACTaGAAGACTAGCTGGGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QQCLPYCKNTFRATELPLLKNAY*KTSWAV Trigger: GACTGCCCAGCTAGTCTTCAAGTATGCATTTTTCAA...TAATGGTAGTTCTGTAGCTCTGAAAGTATTCTTGCAGTATGGAAGACACTGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| 3UTR TCA 72 bp | GATGAAACGTCAGTAAAATCACAGTACATCTCAATATaGGAAAGGACTGCTTCAAAAGGACACACCAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DETSVKSQYISI*ERTASKGHTRE Trigger: CTCTCTGGTGTGTCCTTTTGAAGCAGTCCTTTCTCATATTGAGATGTACTGTGATTTTACTGACGTTTCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR TCA 72 bp | GGGAGGACAGAGAAGCTCTTTTGGAATGTAGAAAGGTaGTGCGTAACTATACAATTCATGAGTTTAACACAA | + |
|
Preference number: 3 (lower is better) Translates to: GRTEKLFWNVER*CVTIQFMSLTQ Trigger: TTGTGTTAAACTCATGAATTGTATAGTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTCCTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | CGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGGGAGTCCAGGGCCCTCTGCTTaGCCAATGATTAACTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTAPRRLKPALPLHSSGSPGPSA*PMINSA Trigger: GGCAGAGTTAATCATTGGCCAAGCAGAGGGCCCTGG...ACTCCCTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGCCAGGGCCCTCTGCTTaGCCAATGATTAACTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TDGRLRGGSSLHSHCTPQPGPSA*PMINSA Trigger: GGCAGAGTTAATCATTGGCCAAGCAGAGGGCCCTGG...CTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | GGGACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTAAGACAATCCCGTTGTaGGTTACAAGGCACTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTDGRLRGGSSLHSHCTPKTIPL*VTRHCL Trigger: GAGGCAGTGCCTTGTAACTCACAACGGGATTGTCTT...AGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | ACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGGGAGATGGTTGTACCACAATaGACTGAGGCAGATGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGSAEAQACTPTALLREMVVPQ*TEADAL Trigger: GAGGGCATCTGCCTCAGTGCATTGTGGTACAACCAT...CTCCCTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | ACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGCCCCACAATTCTCCCTaGAATGGCTCCAATGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TDGRLRGGSSLHSHCTPQPHNSP*NGSNGH Trigger: ATGGCCATTGGAGCCATTGCAGGGAGAATTGTGGGG...CTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | GGGACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTTGGCCGTGGACTTTCTaGTGGAAGAGATGGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: GTDGRLRGGSSLHSHCTPWPWTF*WKRWSM Trigger: CATACTCCATCTCTTCCAGCAGAAAGTCCACGGCCA...AGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | GGGACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCCGTGGACTTTCTGCTaGAAGAGATGGAGTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTDGRLRGGSSLHSHCTPPWTFC*KRWSML Trigger: CAGCATACTCCATCTCTTCCAGCAGAAAGTCCACGG...AGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | ACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGGGAGCTGTTGATCCGTCTGTaGCTTTCTCTGTCCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: TDGSAEAQACTPTALLRELLIRL*LSLSLH Trigger: GTGTAAGGACAGAGAAAGGCACAGACGGATCAACAG...CTCCCTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | ACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGGGAGTCAGTTGAACATTATTaGAGCGGGGTCTTGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDGSAEAQACTPTALLRESVEHY*SGVLVC Trigger: GCAAACCAAGACCCCGCTTCAATAATGTTCAACTGA...CTCCCTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | ACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGATATACTCCAACGCCTaGTGGACGGTCAGGAATATC | + |
|
Preference number: 4 (lower is better) Translates to: TDGRLRGGSSLHSHCTPQIYSNA*WTVRNI Trigger: GATATTCCTGACCGTCCAGCAGGCGTTGGAGTATAT...CTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | ACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGAGATGGAGTATGCTGTaGAAAACACACCCGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TDGRLRGGSSLHSHCTPQRWSML*KTHPRT Trigger: AGTTCTCGGGTGTGTTTTGCACAGCATACTCCATCT...CTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | ACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGGGAGCAACAACACTGTTCATaGTTGTACCACAATGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TDGSAEAQACTPTALLREQQHCS*LYHNAL Trigger: CAGTGCATTGTGGTACAACCATGAACAGTGTTGTTG...CTCCCTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | GGGACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTTTCTGCTGGAAGAGATaGAGTATGCTGTGCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GTDGRLRGGSSLHSHCTPFCWKR*SMLCKT Trigger: TGTTTTGCACAGCATACTCCATCTCTTCCAGCAGAA...AGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | ACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGGGAGTTCTGCTGGAAGAGATaGAGTATGCTGTGCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TDGSAEAQACTPTALLREFCWKR*SMLCKT Trigger: TGTTTTGCACAGCATACTCCATCTCTTCCAGCAGAA...CTCCCTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | ACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGCCAGGGTTGTATGAGTaGATTCTTCTTTTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDGRLRGGSSLHSHCTPQPGLYE*ILLLHP Trigger: TGGATGCAAAAGAAGAATTCACTCATACAACCCTGG...CTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | GGGACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTTCTCTGAGATTCTTTTaGCATTATAACAGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTDGRLRGGSSLHSHCTPSLRFF*HYNRKA Trigger: GGCTTTCCTGTTATAATGTCAAAAGAATCTCAGAGA...AGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | CGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGGGAGTTTTACTGGTCATTACTaGAGCCATAAGAGGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTAPRRLKPALPLHSSGSFTGHY*SHKRNN Trigger: ATTGTTCCTCTTATGGCTGCAGTAATGACCAGTAAA...ACTCCCTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGAGGGAGGCCAGGGCCCTCTGCTTaGCCAATGATTAACTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRTHQRGFVTAPEEGGGRPGPSA*PMINSA Trigger: GGCAGAGTTAATCATTGGCCAAGCAGAGGGCCCTGG...CCTCCCTCCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGAGGGAGGCCCCACAATTCTCCCTaGAATGGCTCCAATGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRTHQRGFVTAPEEGGGRPHNSP*NGSNGH Trigger: ATGGCCATTGGAGCCATTGCAGGGAGAATTGTGGGG...CCTCCCTCCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | GGGACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCGTCAACAATTTTACTaGCATTCATGTCATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTDGRLRGGSSLHSHCTPRQQFY*HSCHFC Trigger: ACAGAAATGACATGAATGCCAGTAAAATTGTTGACG...AGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR CAA 72 bp | TGGGAGATTGCATTCACACCTCCAGATTTTCCCTGCTaGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WEIAFTPPDFPC*ASSGVCTHSQA Trigger: GGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGGAGGTGTGAATGCAATCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGGAGGGAGGACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACAGGAGGCGTCCGTTGTaGGTTACAAGGCACTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGREDREALLECRKVMRNRRRPL*VTRHCL Trigger: GAGGCAGTGCCTTGTAACTCACAACGGACGCCTCCT...GTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTCCTCCCTCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGAGGGAGGATGGTTGTACCACAATaGACTGAGGCAGATGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRTHQRGFVTAPEEGGGRMVVPQ*TEADAL Trigger: GAGGGCATCTGCCTCAGTGCATTGTGGTACAACCAT...CCTCCCTCCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTCCCCACAATTCTCCCTaGAATGGCTCCAATGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PDFPCLASSGVCTHSQAFPHNSP*NGSNGH Trigger: ATGGCCATTGGAGCCATTGCAGGGAGAATTGTGGGG...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGAGGGAGGTGGCCGTGGACTTTCTaGTGGAAGAGATGGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: KRTHQRGFVTAPEEGGGRWPWTF*WKRWSM Trigger: CATACTCCATCTCTTCCAGCAGAAAGTCCACGGCCA...CCTCCCTCCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAGTGATGGTACAGACTACCCCCACAATTCTCCCTaGAATGGCTCCAATGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASSGVCTHSQAFSDGTDYPHNSP*NGSNGH Trigger: ATGGCCATTGGAGCCATTGCAGGGAGAATTGTGGGG...GTAGTCTGTACCATCACTAAAGGCTTGGGAATGTGTGCACACACCACTGCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGGAGGGAGGACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACCCAGGGCCCTCTGCTTaGCCAATGATTAACTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGREDREALLECRKVMRNPGPSA*PMINSA Trigger: GGCAGAGTTAATCATTGGCCAAGCAGAGGGCCCTGG...GTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTCCTCCCTCCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCAAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGGTTGAGCCTTGTGTATaGGTTGGGGAAGGCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLQKDTPERFRYSSRGRGVEPCV*VGEGYH Trigger: GTGATAGCCTTCCCCAACCCATACACAAGGCTCAAC...CCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTTGAAGCAG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCAAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGCCGTGGACTTTCTGCTaGAAGAGATGGAGTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLQKDTPERFRYSSRGRGPWTFC*KRWSML Trigger: CAGCATACTCCATCTCTTCCAGCAGAAAGTCCACGG...CCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTTGAAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTCCGTGGACTTTCTGCTaGAAGAGATGGAGTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PDFPCLASSGVCTHSQAFPWTFC*KRWSML Trigger: CAGCATACTCCATCTCTTCCAGCAGAAAGTCCACGG...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTGTACCACAATaGACTGAGGCAGATGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASSGVCTHSQAFSDGTDYMVVPQ*TEADAL Trigger: GAGGGCATCTGCCTCAGTGCATTGTGGTACAACCAT...GTAGTCTGTACCATCACTAAAGGCTTGGGAATGTGTGCACACACCACTGCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCAAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGGGAAGAGATGGAGTATaGTGTGCAAAACACACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLQKDTPERFRYSSRGRGGRDGV*CAKHTR Trigger: TCGGGTGTGTTTTGCACAGCATACTCCATCTCTTCC...CCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTTGAAGCAG 51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTCTGCTCTCCCAGCATTATTTGCAAACCGGGTTGCAAAGCTCGCCTTGTATGGCCGTGGACTTTCTaGTGGAAGAGATGGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SLCSPSIICKPGCKARLVWPWTF*WKRWSM Trigger: CATACTCCATCTCTTCCAGCAGAAAGTCCACGGCCA...TACAAGGCGAGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAGCAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTCTGCTCTCCCAGCATTATTTGCAAACCGGGTTGCAAAGCTCGCCTTGTAGTTGAGCCTTGTGTATaGGTTGGGGAAGGCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLCSPSIICKPGCKARLVVEPCV*VGEGYH Trigger: GTGATAGCCTTCCCCAACCCATACACAAGGCTCAAC...TACAAGGCGAGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAGCAGAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTCTGCTCTCCCAGCATTATTTGCAAACCGGGTTGCAAAGCTCGCCTTGTACCGTGGACTTTCTGCTaGAAGAGATGGAGTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLCSPSIICKPGCKARLVPWTFC*KRWSML Trigger: CAGCATACTCCATCTCTTCCAGCAGAAAGTCCACGG...TACAAGGCGAGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAGCAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| 3UTR CAA 72 bp | CCTCCCCAAACAATCCCTCTGCTCTCCCAGCATTATTaGCAAACCGGGTTGCAAAGCTCGCCTTGTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPQTIPLLSQHY*QTGLQSSPCIS Trigger: GGAAATACAAGGCGAGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAGCAGAGGGATTGTTTGGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| CDS-3UTR TCA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTTCAGTTGAACATTATTaGAGCGGGGTCTTGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PDFPCLASSGVCTHSQAFSVEHY*SGVLVC Trigger: GCAAACCAAGACCCCGCTTCAATAATGTTCAACTGA...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAGATGGAGTATGCTGTaGAAAACACACCCGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PDFPCLASSGVCTHSQAFRWSML*KTHPRT Trigger: AGTTCTCGGGTGTGTTTTGCACAGCATACTCCATCT...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCAAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGAGATGGAGTATGCTGTaGAAAACACACCCGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLQKDTPERFRYSSRGRGRWSML*KTHPRT Trigger: AGTTCTCGGGTGTGTTTTGCACAGCATACTCCATCT...CCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTTGAAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAGTGATGGTACAGACTACGGAAGAGATGGAGTATaGTGTGCAAAACACACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ASSGVCTHSQAFSDGTDYGRDGV*CAKHTR Trigger: TCGGGTGTGTTTTGCACAGCATACTCCATCTCTTCC...GTAGTCTGTACCATCACTAAAGGCTTGGGAATGTGTGCACACACCACTGCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTCTGCTCTCCCAGCATTATTTGCAAACCGGGTTGCAAAGCTCGCCTTGTAGGAAGAGATGGAGTATaGTGTGCAAAACACACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLCSPSIICKPGCKARLVGRDGV*CAKHTR Trigger: TCGGGTGTGTTTTGCACAGCATACTCCATCTCTTCC...TACAAGGCGAGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAGCAGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | GCTCAATTCAAAGTAGTCCCTCCAGAAGTAGGGACTGTAATGCGTCTCTGTGGTGTCAAGGGCTCCACGTaGTGCTTTAGTTGCTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQFKVVPPEVGTVMRLCGVKGST*CFSCSR Trigger: TCTCGAGCAACTAAAGCAGCACGTGGAGCCCTTGAC...ACCACAGAGACGCATTACAGTCCCTACTTCTGGAGGGACTACTTTGAATTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGGAGGGAGGACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACGTTGAGCCTTGTGTATaGGTTGGGGAAGGCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGREDREALLECRKVMRNVEPCV*VGEGYH Trigger: GTGATAGCCTTCCCCAACCCATACACAAGGCTCAAC...GTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTCCTCCCTCCCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTTCATCTTCAGAAGTCTaGAAGTCCATAATGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PDFPCLASSGVCTHSQAFSSSEV*KSIMAP Trigger: AGGTGCCATTATGGACTTTCAGACTTCTGAAGATGA...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110301.2 |
||
| CDS-3UTR TCA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTCCAGGGTTGTATGAGTaGATTCTTCTTTTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PDFPCLASSGVCTHSQAFPGLYE*ILLLHP Trigger: TGGATGCAAAAGAAGAATTCACTCATACAACCCTGG...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAGTGATGGTACAGACTACTCTACAGGACTCAGTTaGACATTATTGAAGCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSGVCTHSQAFSDGTDYSTGLS*TLLKRG Trigger: ACCCCGCTTCAATAATGTTCAACTGAGTCCTGTAGA...GTAGTCTGTACCATCACTAAAGGCTTGGGAATGTGTGCACACACCACTGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | GCTCAATTCAAAGTAGTCCCTCCAGAAGTAGGGACTGTAATGCGTCTCTGTGGTATGGTTGTACCACAATaGACTGAGGCAGATGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQFKVVPPEVGTVMRLCGMVVPQ*TEADAL Trigger: GAGGGCATCTGCCTCAGTGCATTGTGGTACAACCAT...ACCACAGAGACGCATTACAGTCCCTACTTCTGGAGGGACTACTTTGAATTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGGAGGGAGGACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACATATACTCCAACGCCTaGTGGACGGTCAGGAATATC | + |
|
Preference number: 4 (lower is better) Translates to: RGREDREALLECRKVMRNIYSNA*WTVRNI Trigger: GATATTCCTGACCGTCCAGCAGGCGTTGGAGTATAT...GTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTCCTCCCTCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCAAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGACGTGCTGCTTTAGTTaGTCGAGATGCTCTAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLQKDTPERFRYSSRGRGTCCFS*SRCSKM Trigger: CATTTTAGAGCATCTCGAGCAACTAAAGCAGCACGT...CCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTTGAAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAATTCAAAGTAGTCCCTCCAGAAGTAGGGACTGTAATGCGTCTCTGTGGTCATCGCTACTCGCGCTaGTTATGCTGTTGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQFKVVPPEVGTVMRLCGHRYSR*LCCCSC Trigger: ACAGCTACAACAGCATAACCAGCGCGAGTAGCGATG...ACCACAGAGACGCATTACAGTCCCTACTTCTGGAGGGACTACTTTGAATTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110301.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCAAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGTTCTGCTGGAAGAGATaGAGTATGCTGTGCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLQKDTPERFRYSSRGRGFCWKR*SMLCKT Trigger: TGTTTTGCACAGCATACTCCATCTCTTCCAGCAGAA...CCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTTGAAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGAAGGAGGCGTCCGTTGTaGGTTACAAGGCACTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IRVKFVLDSEPHSTQAGRRRRPL*VTRHCL Trigger: GAGGCAGTGCCTTGTAACTCACAACGGACGCCTCCT...TCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 |
||
| CDS-3UTR CCA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAATAGTTTTAATCTCTaGAATTCCAGAGCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PDFPCLASSGVCTHSQAFNSFNL*NSRATG Trigger: GCCTGTGGCTCTGGAATTCCAGAGATTAAAACTATT...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCAAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGAATAGTTTTAATCTCTaGAATTCCAGAGCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLQKDTPERFRYSSRGRGNSFNL*NSRATG Trigger: GCCTGTGGCTCTGGAATTCCAGAGATTAAAACTATT...CCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTTGAAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGTGCTGAAGAGTTCCTACCCCAGCAGTGTCTTCCATACTGCAAGAATATCAGTTGAACATTATTaGAGCGGGGTCTTGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAVLKSSYPSSVFHTARISVEHY*SGVLVC Trigger: GCAAACCAAGACCCCGCTTCAATAATGTTCAACTGA...TATTCTTGCAGTATGGAAGACACTGCTGGGGTAGGAACTCTTCAGCACTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| CDS-3UTR TCA 90 bp | GCTCAATTCAAAGTAGTCCCTCCAGAAGTAGGGACTGTAATGCGTCTCTGTGGTTCAGTTGAACATTATTaGAGCGGGGTCTTGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQFKVVPPEVGTVMRLCGSVEHY*SGVLVC Trigger: GCAAACCAAGACCCCGCTTCAATAATGTTCAACTGA...ACCACAGAGACGCATTACAGTCCCTACTTCTGGAGGGACTACTTTGAATTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGGAGGGAGGACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACTACTCGCGCTGGTTATaGTGTTGTAGCTGTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RGREDREALLECRKVMRNYSRWL*CCSCFY Trigger: ATAGAAACAGCTACAACAGCATAACCAGCGCGAGTA...GTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTCCTCCCTCCCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110301.2 |
||
| CDS-3UTR GCA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTTTTACTGGTCATTACTaGAGCCATAAGAGGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: PDFPCLASSGVCTHSQAFFTGHY*SHKRNN Trigger: ATTGTTCCTCTTATGGCTGCAGTAATGACCAGTAAA...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | CATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTAATGGCACAAGAAACAAGGGCTCCACGTGCTaGTTTAGTTGCTCGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HSQAFSDGTDYMVNGTRNKGSTC*FSCSRC Trigger: GCATCTCGAGCAACTAAAGCAGCACGTGGAGCCCTT...GTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGACCAGGGCCCTCTGCTTaGCCAATGATTAACTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRVKFVLDSEPHSTQAGRPGPSA*PMINSA Trigger: GGCAGAGTTAATCATTGGCCAAGCAGAGGGCCCTGG...TCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGAGGGAGGCGTCAACAATTTTACTaGCATTCATGTCATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRTHQRGFVTAPEEGGGRRQQFY*HSCHFC Trigger: ACAGAAATGACATGAATGCCAGTAAAATTGTTGACG...CCTCCCTCCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTCTGCTCTCCCAGCATTATTTGCAAACCGGGTTGCAAAGCTCGCCTTGTATCTCTGAGATTCTTTTaGCATTATAACAGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCSPSIICKPGCKARLVSLRFF*HYNRKA Trigger: GGCTTTCCTGTTATAATGTCAAAAGAATCTCAGAGA...TACAAGGCGAGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAGCAGAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | GCTCAATTCAAAGTAGTCCCTCCAGAAGTAGGGACTGTAATGCGTCTCTGTGGTTACTCGCGCTGGTTATaGTGTTGTAGCTGTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: AQFKVVPPEVGTVMRLCGYSRWL*CCSCFY Trigger: ATAGAAACAGCTACAACAGCATAACCAGCGCGAGTA...ACCACAGAGACGCATTACAGTCCCTACTTCTGGAGGGACTACTTTGAATTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110301.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCAAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGTTTCACCAAAGAAACTaGAAGAAAGGCAAAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLQKDTPERFRYSSRGRGFHQRN*KKGKTQ Trigger: TTGAGTTTTGCCTTTCTTGCAGTTTCTTTGGTGAAA...CCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTTGAAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTTTTCACCAAAGAAACTaGAAGAAAGGCAAAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PDFPCLASSGVCTHSQAFFHQRN*KKGKTQ Trigger: TTGAGTTTTGCCTTTCTTGCAGTTTCTTTGGTGAAA...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTAATGGCACAAGAAACACCCCACAATTCTCCCTaGAATGGCTCCAATGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IPKPLVMVQTTWLMAQETPHNSP*NGSNGH Trigger: ATGGCCATTGGAGCCATTGCAGGGAGAATTGTGGGG...TGTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | CATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTAATGGCACAAGAAACTGGCCGTGGACTTTCTaGTGGAAGAGATGGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: HSQAFSDGTDYMVNGTRNWPWTF*WKRWSM Trigger: CATACTCCATCTCTTCCAGCAGAAAGTCCACGGCCA...GTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | GCTCAATTCAAAGTAGTCCCTCCAGAAGTAGGGACTGTAATGCGTCTCTGTGGTACGTGCTGCTTTAGTTaGTCGAGATGCTCTAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: AQFKVVPPEVGTVMRLCGTCCFS*SRCSKM Trigger: CATTTTAGAGCATCTCGAGCAACTAAAGCAGCACGT...ACCACAGAGACGCATTACAGTCCCTACTTCTGGAGGGACTACTTTGAATTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTAATGGCACAAGAAACAGTCAAGGGCTCCACGTaGTGCTTTAGTTGCTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPKPLVMVQTTWLMAQETVKGST*CFSCSR Trigger: TCTCGAGCAACTAAAGCAGCACGTGGAGCCCTTGAC...TGTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATTGGTTGAGCCTTGTGTATaGGTTGGGGAAGGCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RVKFVLDSEPHSTQAGRLVEPCV*VGEGYH Trigger: GTGATAGCCTTCCCCAACCCATACACAAGGCTCAAC...CAATCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTCGTCAACAATTTTACTaGCATTCATGTCATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PDFPCLASSGVCTHSQAFRQQFY*HSCHFC Trigger: ACAGAAATGACATGAATGCCAGTAAAATTGTTGACG...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | GTTTCAGAAAATATCTGTCTGCACAAATGCATTTGGCCTTTGAAAAATGCATACAGGAGGCGTCCGTTGTaGGTTACAAGGCACTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSENICLHKCIWPLKNAYRRRPL*VTRHCL Trigger: GAGGCAGTGCCTTGTAACTCACAACGGACGCCTCCT...GTATGCATTTTTCAAAGGCCAAATGCATTTGTGCAGACAGATATTTTCTGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTGTCTTCCATACTGCAAGAATACTTTCAGAGCTACAGAACTACCATTATGGCCGTGGACTTTCTaGTGGAAGAGATGGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: QQCLPYCKNTFRATELPLWPWTF*WKRWSM Trigger: CATACTCCATCTCTTCCAGCAGAAAGTCCACGGCCA...TAATGGTAGTTCTGTAGCTCTGAAAGTATTCTTGCAGTATGGAAGACACTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| CDS-3UTR CCA 90 bp | ATTAGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGACATCGCTACTCGCGCTaGTTATGCTGTTGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IRVKFVLDSEPHSTQAGRHRYSR*LCCCSC Trigger: ACAGCTACAACAGCATAACCAGCGCGAGTAGCGATG...TCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110301.2 |
||
| CDS-3UTR CCA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGGTTGAGCCTTGTGTATaGGTTGGGGAAGGCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQVEPCV*VGEGYH Trigger: GTGATAGCCTTCCCCAACCCATACACAAGGCTCAAC...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAATTCAAAGTAGTCCCTCCAGAAGTAGGGACTGTAATGCGTCTCTGTGGTTCTCTGAGATTCTTTTaGCATTATAACAGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQFKVVPPEVGTVMRLCGSLRFF*HYNRKA Trigger: GGCTTTCCTGTTATAATGTCAAAAGAATCTCAGAGA...ACCACAGAGACGCATTACAGTCCCTACTTCTGGAGGGACTACTTTGAATTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGACTGTTGATCCGTCTGTaGCTTTCTCTGTCCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: IRVKFVLDSEPHSTQAGRLLIRL*LSLSLH Trigger: GTGTAAGGACAGAGAAAGGCACAGACGGATCAACAG...TCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTAATGGCACAAGAAACACTGTTGATCCGTCTGTaGCTTTCTCTGTCCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: IPKPLVMVQTTWLMAQETLLIRL*LSLSLH Trigger: GTGTAAGGACAGAGAAAGGCACAGACGGATCAACAG...TGTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGATATACTCCAACGCCTaGTGGACGGTCAGGAATATC | + |
|
Preference number: 4 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQIYSNA*WTVRNI Trigger: GATATTCCTGACCGTCCAGCAGGCGTTGGAGTATAT...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGTGCTGAAGAGTTCCTACCCCAGCAGTGTCTTCCATACTGCAAGAATATTTACTGGTCATTACTaGAGCCATAAGAGGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAVLKSSYPSSVFHTARIFTGHY*SHKRNN Trigger: ATTGTTCCTCTTATGGCTGCAGTAATGACCAGTAAA...TATTCTTGCAGTATGGAAGACACTGCTGGGGTAGGAACTCTTCAGCACTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATTGAGATGGAGTATGCTGTaGAAAACACACCCGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: RVKFVLDSEPHSTQAGRLRWSML*KTHPRT Trigger: AGTTCTCGGGTGTGTTTTGCACAGCATACTCCATCT...CAATCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | CATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTAATGGCACAAGAAACTCATCTTCAGAAGTCTaGAAGTCCATAATGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HSQAFSDGTDYMVNGTRNSSSEV*KSIMAP Trigger: AGGTGCCATTATGGACTTTCAGACTTCTGAAGATGA...GTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110301.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTAATGGCACAAGAAACATCAGTTGAACATTATTaGAGCGGGGTCTTGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IPKPLVMVQTTWLMAQETSVEHY*SGVLVC Trigger: GCAAACCAAGACCCCGCTTCAATAATGTTCAACTGA...TGTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGTCTACAGGACTCAGTTaGACATTATTGAAGCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQSTGLS*TLLKRG Trigger: ACCCCGCTTCAATAATGTTCAACTGAGTCCTGTAGA...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | GCTCAATTCAAAGTAGTCCCTCCAGAAGTAGGGACTGTAATGCGTCTCTGTGGTTTTCACCAAAGAAACTaGAAGAAAGGCAAAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AQFKVVPPEVGTVMRLCGFHQRN*KKGKTQ Trigger: TTGAGTTTTGCCTTTCTTGCAGTTTCTTTGGTGAAA...ACCACAGAGACGCATTACAGTCCCTACTTCTGGAGGGACTACTTTGAATTGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGAAAGGTGATGCGTAACTATACAATTCATGAGTTTAACACAACAGTTCTGAAGGGCTCCACGTGCTaGTTTAGTTGCTCGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: CRKVMRNYTIHEFNTTVLKGSTC*FSCSRC Trigger: GCATCTCGAGCAACTAAAGCAGCACGTGGAGCCCTT...CAGAACTGTTGTGTTAAACTCATGAATTGTATAGTTACGCATCACCTTTCTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGGGAACTTTGGATCACTCGAATATGGCTTCCTGATTTTCTAAGTCTTCAAAGATGGAGTATGCTGTaGAAAACACACCCGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: FGELWITRIWLPDFLSLQRWSML*KTHPRT Trigger: AGTTCTCGGGTGTGTTTTGCACAGCATACTCCATCT...TTGAAGACTTAGAAAATCAGGAAGCCATATTCGAGTGATCCAAAGTTCCCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATTGAATAGTTTTAATCTCTaGAATTCCAGAGCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVKFVLDSEPHSTQAGRLNSFNL*NSRATG Trigger: GCCTGTGGCTCTGGAATTCCAGAGATTAAAACTATT...CAATCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | CATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTAATGGCACAAGAAACAATAGTTTTAATCTCTaGAATTCCAGAGCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSQAFSDGTDYMVNGTRNNSFNL*NSRATG Trigger: GCCTGTGGCTCTGGAATTCCAGAGATTAAAACTATT...GTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGTCTTCCATACTGCAAGAATACTTTCAGAGCTACAGAACTACCATTATTCTGCTGGAAGAGATaGAGTATGCTGTGCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: QQCLPYCKNTFRATELPLFCWKR*SMLCKT Trigger: TGTTTTGCACAGCATACTCCATCTCTTCCAGCAGAA...TAATGGTAGTTCTGTAGCTCTGAAAGTATTCTTGCAGTATGGAAGACACTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| CDS-3UTR CCA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGTTCTGCTGGAAGAGATaGAGTATGCTGTGCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQFCWKR*SMLCKT Trigger: TGTTTTGCACAGCATACTCCATCTCTTCCAGCAGAA...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATTGTCTCTGAGATTCTTTTaGCATTATAACAGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVKFVLDSEPHSTQAGRLSLRFF*HYNRKA Trigger: GGCTTTCCTGTTATAATGTCAAAAGAATCTCAGAGA...CAATCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGGGAACTTTGGATCACTCGAATATGGCTTCCTGATTTTCTAAGTCTTCAACAACAACACTGTTCATaGTTGTACCACAATGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FGELWITRIWLPDFLSLQQQHCS*LYHNAL Trigger: CAGTGCATTGTGGTACAACCATGAACAGTGTTGTTG...TTGAAGACTTAGAAAATCAGGAAGCCATATTCGAGTGATCCAAAGTTCCCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| CDS-3UTR CCA 90 bp | ATTAGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGAAATAGTTTTAATCTCTaGAATTCCAGAGCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRVKFVLDSEPHSTQAGRNSFNL*NSRATG Trigger: GCCTGTGGCTCTGGAATTCCAGAGATTAAAACTATT...TCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR CAA 72 bp | TCAGAAAATATCTGTCTGCACAAATGCATTTGGCCTTaGAAAAATGCATACTTGAAGACTAGCTGGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SENICLHKCIWP*KNAYLKTSWAV Trigger: GACTGCCCAGCTAGTCTTCAAGTATGCATTTTTCAAAGGCCAAATGCATTTGTGCAGACAGATATTTTCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| CDS-3UTR TCA 90 bp | AACGCATTAAAAACACGTCACTTTTCATGTGTTTCAGCAGTAAGACACATCAGACCAGGGTTGTATGAGTaGATTCTTCTTTTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: NALKTRHFSCVSAVRHIRPGLYE*ILLLHP Trigger: TGGATGCAAAAGAAGAATTCACTCATACAACCCTGG...TCTGATGTGTCTTACTGCTGAAACACATGAAAAGTGACGTGTTTTTAATGCGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| CDS-3UTR TCA 90 bp | ATTAGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATCTCTGAGATTCTTTTaGCATTATAACAGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRVKFVLDSEPHSTQAGRSLRFF*HYNRKA Trigger: GGCTTTCCTGTTATAATGTCAAAAGAATCTCAGAGA...TCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGTTTACTGGTCATTACTaGAGCCATAAGAGGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQFTGHY*SHKRNN Trigger: ATTGTTCCTCTTATGGCTGCAGTAATGACCAGTAAA...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGTTTCACCAAAGAAACTaGAAGAAAGGCAAAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQFHQRN*KKGKTQ Trigger: TTGAGTTTTGCCTTTCTTGCAGTTTCTTTGGTGAAA...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATTTCACCAAAGAAACTaGAAGAAAGGCAAAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IRVKFVLDSEPHSTQAGRFHQRN*KKGKTQ Trigger: TTGAGTTTTGCCTTTCTTGCAGTTTCTTTGGTGAAA...TCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGAAAGGTGATGCGTAACTATACAATTCATGAGTTTAACACAACAGTTCTGCAACAACACTGTTCATaGTTGTACCACAATGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CRKVMRNYTIHEFNTTVLQQHCS*LYHNAL Trigger: CAGTGCATTGTGGTACAACCATGAACAGTGTTGTTG...CAGAACTGTTGTGTTAAACTCATGAATTGTATAGTTACGCATCACCTTTCTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CCA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGCGTCAACAATTTTACTaGCATTCATGTCATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQRQQFY*HSCHFC Trigger: ACAGAAATGACATGAATGCCAGTAAAATTGTTGACG...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR GCA 90 bp | GACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACTATACAATTCATTTTACTGGTCATTACTaGAGCCATAAGAGGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: DREALLECRKVMRNYTIHFTGHY*SHKRNN Trigger: ATTGTTCCTCTTATGGCTGCAGTAATGACCAGTAAA...ATGAATTGTATAGTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| 3UTR CAA 72 bp | CTAGGCACATGTAGTTCATGGTATCCACTATCTTATTaGGTTGGAAATCAACCAAACCTTTATGAAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTCSSWYPLSY*VGNQPNLYEKR Trigger: TCTCTTTTCATAAAGGTTTGGTTGATTTCCAACCAAATAAGATAGTGGATACCATGAACTACATGTGCCTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGAAAATATCTGTCTGCACAAATGCATTTGGCCTTTGAAAAATGCATACCGTCAACAATTTTACTaGCATTCATGTCATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSENICLHKCIWPLKNAYRQQFY*HSCHFC Trigger: ACAGAAATGACATGAATGCCAGTAAAATTGTTGACG...GTATGCATTTTTCAAAGGCCAAATGCATTTGTGCAGACAGATATTTTCTGAAAC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| CDS-3UTR CAA 90 bp | CGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGGGAGTGAGACACAGTCATTCTaGTCACACCACCTAAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: RTAPRRLKPALPLHSSGSETQSF*SHHLST Trigger: CGTGCTTAGGTGGTGTGACAAGAATGACTGTGTCTC...ACTCCCTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | GGGACAGACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTGAGACACAGTCATTCTaGTCACACCACCTAAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: GTDGRLRGGSSLHSHCTPETQSF*SHHLST Trigger: CGTGCTTAGGTGGTGTGACAAGAATGACTGTGTCTC...AGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGTCTGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | ACGGACGGCTCCGCGGAGGCTCAAGCCTGCACTCCCACTGCACTCCTCAGGGAGCATTGGTGCTATACTTaGGAAAGAGGTAGGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TDGSAEAQACTPTALLREHWCYT*ERGRKR Trigger: TCTTTTCCTACCTCTTTCCAAAGTATAGCACCAATG...CTCCCTGAGGAGTGCAGTGGGAGTGCAGGCTTGAGCCTCCGCGGAGCCGTCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTCAAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGACCTCACACCACTCCTaGAAGATAAACCAGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLQKDTPERFRYSSRGRGTSHHS*KINQSW Trigger: CCACGACTGGTTTATCTTCAAGGAGTGGTGTGAGGT...CCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTTGAAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTACCTCACACCACTCCTaGAAGATAAACCAGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PDFPCLASSGVCTHSQAFTSHHS*KINQSW Trigger: CCACGACTGGTTTATCTTCAAGGAGTGGTGTGAGGT...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS GCA 90 bp | CACCTGCTCCATCTAGGAGCTCCTCATCGCTACTCGCGCTGGTTATaGTGTTGTAGCTGTTTCTATAGTAGCCTCTATGGAACAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLLHLGAPHRYSRWL*CCSCFYSSLYGTAA Trigger: AGCAGCTGTTCCATAGAGGCTACTATAGAAACAGCTACAACAGCATAACCAGCGCGAGTAGCGATGAGGAGCTCCTAGATGGAGCAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110301.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTCTGCTCTCCCAGCATTATTTGCAAACCGGGTTGCAAAGCTCGCCTTGTAGAGACACAGTCATTCTaGTCACACCACCTAAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SLCSPSIICKPGCKARLVETQSF*SHHLST Trigger: CGTGCTTAGGTGGTGTGACAAGAATGACTGTGTCTC...TACAAGGCGAGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAGCAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| CDS TCA 90 bp | CCAGCTGCTGTGTCCCCGTCTAACAAATTGTCATCTTCAGAAGTCTaGAAGTCCATAATGGCACCTGCTCCATCTAGGAGCTCCTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: PAAVSPSNKLSSSEV*KSIMAPAPSRSSSS Trigger: CGATGAGGAGCTCCTAGATGGAGCAGGTGCCATTATGGACTTTCAGACTTCTGAAGATGACAATTTGTTAGACGGGGACACAGCAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110301.2 |
||
| CDS GCA 90 bp | CAAGGAGGCGTCAAGGGCTCCACGTGCTGCTTTAGTTGCTCGAGATaGTCTAAAATGTTCTTCTTTGTGATGATCCCCAAGACAATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QGGVKGSTCCFSCSR*SKMFFFVMIPKTIP Trigger: CGGGATTGTCTTGGGGATCATCACAAAGAAGAACATTTTAGAGCATCTCGAGCAACTAAAGCAGCACGTGGAGCCCTTGACGCCTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATTTTCCCTGCTTGGCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAAGCCTGACGGGACCTaGATACCAAAAGTGAATACT | + |
|
Preference number: 5 (lower is better) Translates to: PDFPCLASSGVCTHSQAFKPDGT*IPKVNT Trigger: AGTATTCACTTTTGGTATCAAGGTCCCGTCAGGCTT...AAAGGCTTGGGAATGTGTGCACACACCACTGCTGGCCAAGCAGGGAAAATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGCAGTGGTGTGTGCACACATTCCCAAGCCTTTAGTGATGGTACAGACTACAAGCCTGACGGGACCTaGATACCAAAAGTGAATACT | + |
|
Preference number: 5 (lower is better) Translates to: ASSGVCTHSQAFSDGTDYKPDGT*IPKVNT Trigger: AGTATTCACTTTTGGTATCAAGGTCCCGTCAGGCTT...GTAGTCTGTACCATCACTAAAGGCTTGGGAATGTGTGCACACACCACTGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| CDS-3UTR CAA 90 bp | TCCCTCTGCTCTCCCAGCATTATTTGCAAACCGGGTTGCAAAGCTCGCCTTGTAAAGCCTGACGGGACCTaGATACCAAAAGTGAATACT | + |
|
Preference number: 5 (lower is better) Translates to: SLCSPSIICKPGCKARLVKPDGT*IPKVNT Trigger: AGTATTCACTTTTGGTATCAAGGTCCCGTCAGGCTT...TACAAGGCGAGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAGCAGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGGACACACCAGAGAGGTTTCGTTACAGCTCCAGAGGAAGGGGGAGGGAGGTCATCTACTGTCATATaGTCCTGTGTCAAAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KRTHQRGFVTAPEEGGGRSSTVI*SCVKTA Trigger: AGCTGTTTTGACACAGGACAATATGACAGTAGATGA...CCTCCCTCCCCCTTCCTCTGGAGCTGTAACGAAACCTCTCTGGTGTGTCCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS GCA 90 bp | CTCAGTTTTAATGGCCGTGGACTTTCTGCTGGAAGAGATGGAGTATaGTGTGCAAAACACACCCGAGAACTGCCAACAATCCCTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSFNGRGLSAGRDGV*CAKHTRELPTIPSC Trigger: ACAAGAAGGGATTGTTGGCAGTTCTCGGGTGTGTTTTGCACAGCATACTCCATCTCTTCCAGCAGAAAGTCCACGGCCATTAAAACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTCTGCTCTCCCAGCATTATTTGCAAACCGGGTTGCAAAGCTCGCCTTGTACATTGGTGCTATACTTaGGAAAGAGGTAGGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLCSPSIICKPGCKARLVHWCYT*ERGRKR Trigger: TCTTTTCCTACCTCTTTCCAAAGTATAGCACCAATG...TACAAGGCGAGCTTTGCAACCCGGTTTGCAAATAATGCTGGGAGAGCAGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | CATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTAATGGCACAAGAAACGAGACACAGTCATTCTaGTCACACCACCTAAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: HSQAFSDGTDYMVNGTRNETQSF*SHHLST Trigger: CGTGCTTAGGTGGTGTGACAAGAATGACTGTGTCTC...GTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGGAGGGAGGACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACTCATCTACTGTCATATaGTCCTGTGTCAAAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGREDREALLECRKVMRNSSTVI*SCVKTA Trigger: AGCTGTTTTGACACAGGACAATATGACAGTAGATGA...GTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTCCTCCCTCCCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS TCA 90 bp | GGGTCACTTCTTCGAGGTCTCATAACATCAGCAGCCAGGGTTGTATaGGTGAATTCTTCTTTTGCATCCAAGAAAGGGTACCCATTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSLLRGLITSAARVV*VNSSFASKKGYPFS Trigger: ACTAAATGGGTACCCTTTCTTGGATGCAAAAGAAGAATTCACTCATACAACCCTGGCTGCTGATGTTATGAGACCTCGAAGAAGTGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS GCA 90 bp | ACCTTCCCTACCAAAGGCATCACCAACCCATTTACTGGTCATTACTaGAGCCATAAGAGGAACAATATATTCCAAGCCTCCAGTAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TFPTKGITNPFTGHY*SHKRNNIFQASSKF Trigger: GAACTTACTGGAGGCTTGGAATATATTGTTCCTCTTATGGCTGCAGTAATGACCAGTAAATGGGTTGGTGATGCCTTTGGTAGGGAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGTGTCTTCCATACTGCAAGAATACTTTCAGAGCTACAGAACTACCATTAACCTCACACCACTCCTaGAAGATAAACCAGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QQCLPYCKNTFRATELPLTSHHS*KINQSW Trigger: CCACGACTGGTTTATCTTCAAGGAGTGGTGTGAGGT...TAATGGTAGTTCTGTAGCTCTGAAAGTATTCTTGCAGTATGGAAGACACTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056508.12 ENSMUST00000093490.9 |
||
| CDS-3UTR CAA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGACCTCACACCACTCCTaGAAGATAAACCAGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQTSHHS*KINQSW Trigger: CCACGACTGGTTTATCTTCAAGGAGTGGTGTGAGGT...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTAATGGCACAAGAAACAAAGCCTGACGGGACCTaGATACCAAAAGTGAATACT | + |
|
Preference number: 5 (lower is better) Translates to: IPKPLVMVQTTWLMAQETKPDGT*IPKVNT Trigger: AGTATTCACTTTTGGTATCAAGGTCCCGTCAGGCTT...TGTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | CATTCCCAAGCCTTTAGTGATGGTACAGACTACATGGTTAATGGCACAAGAAACCATTGGTGCTATACTTaGGAAAGAGGTAGGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HSQAFSDGTDYMVNGTRNHWCYT*ERGRKR Trigger: TCTTTTCCTACCTCTTTCCAAAGTATAGCACCAATG...GTTTCTTGTGCCATTAACCATGTAGTCTGTACCATCACTAAAGGCTTGGGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTCAAGTTTGTTTTAGATTCTGAACCACACAGCACACAAGCTGGGAGATTGCATTGGTGCTATACTTaGGAAAGAGGTAGGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVKFVLDSEPHSTQAGRLHWCYT*ERGRKR Trigger: TCTTTTCCTACCTCTTTCCAAAGTATAGCACCAATG...CAATCTCCCAGCTTGTGTGCTGTGTGGTTCAGAATCTAAAACAAACTTGACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGAAAGGTGATGCGTAACTATACAATTCATGAGTTTAACACAACAGTTCTGACCTCACACCACTCCTaGAAGATAAACCAGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CRKVMRNYTIHEFNTTVLTSHHS*KINQSW Trigger: CCACGACTGGTTTATCTTCAAGGAGTGGTGTGAGGT...CAGAACTGTTGTGTTAAACTCATGAATTGTATAGTTACGCATCACCTTTCTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
||
| CDS-3UTR CAA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGCATTGGTGCTATACTTaGGAAAGAGGTAGGAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQHWCYT*ERGRKR Trigger: TCTTTTCCTACCTCTTTCCAAAGTATAGCACCAATG...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| CDS-3UTR CAA 90 bp | GACAGAGAAGCTCTTTTGGAATGTAGAAAGGTGATGCGTAACTATACAATTCATAAGCCTGACGGGACCTaGATACCAAAAGTGAATACT | + |
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Preference number: 5 (lower is better) Translates to: DREALLECRKVMRNYTIHKPDGT*IPKVNT Trigger: AGTATTCACTTTTGGTATCAAGGTCCCGTCAGGCTT...ATGAATTGTATAGTTACGCATCACCTTTCTACATTCCAAAAGAGCTTCTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| CDS-3UTR CAA 90 bp | AACATGCAATTAATACCAGGTACAGCTAAACAGACTCCTTCCTCCTCTTTACAGTCATCTACTGTCATATaGTCCTGTGTCAAAACAGCT | + |
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Preference number: 5 (lower is better) Translates to: NMQLIPGTAKQTPSSSLQSSTVI*SCVKTA Trigger: AGCTGTTTTGACACAGGACAATATGACAGTAGATGA...CTGTAAAGAGGAGGAAGGAGTCTGTTTAGCTGTACCTGGTATTAATTGCATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| CDS-3UTR CAA 90 bp | TGTAGAAAGGTGATGCGTAACTATACAATTCATGAGTTTAACACAACAGTTCTGTCATCTACTGTCATATaGTCCTGTGTCAAAACAGCT | + |
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Preference number: 5 (lower is better) Translates to: CRKVMRNYTIHEFNTTVLSSTVI*SCVKTA Trigger: AGCTGTTTTGACACAGGACAATATGACAGTAGATGA...CAGAACTGTTGTGTTAAACTCATGAATTGTATAGTTACGCATCACCTTTCTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| CDS GCA 72 bp | CCGTGGACTTTCTGCTGGAAGAGATGGAGTATGCTGTaGAAAACACACCCGAGAACTGCCAACAATCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PWTFCWKRWSML*KTHPRTANNPF Trigger: GAAGGGATTGTTGGCAGTTCTCGGGTGTGTTTTGCACAGCATACTCCATCTCTTCCAGCAGAAAGTCCACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| CDS CCA 72 bp | CTGCTCCATCTAGGAGCTCCTCATCGCTACTCGCGCTaGTTATGCTGTTGTAGCTGTTTCTATAGTAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LLHLGAPHRYSR*LCCCSCFYSSL Trigger: GAGGCTACTATAGAAACAGCTACAACAGCATAACCAGCGCGAGTAGCGATGAGGAGCTCCTAGATGGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110301.2 |
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| CDS GCA 72 bp | AATGGCCGTGGACTTTCTGCTGGAAGAGATGGAGTATaGTGTGCAAAACACACCCGAGAACTGCCAACAATC | + |
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Preference number: 6 (lower is better) Translates to: NGRGLSAGRDGV*CAKHTRELPTI Trigger: GATTGTTGGCAGTTCTCGGGTGTGTTTTGCACAGCATACTCCATCTCTTCCAGCAGAAAGTCCACGGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| CDS CCA 72 bp | AACGTTGTCTCATTAGAGCCCCAACAACACTGTTCATaGTTGTACCACAATGCACTGAGGCAGATGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: NVVSLEPQQHCS*LYHNALRQMPS Trigger: GGAGGGCATCTGCCTCAGTGCATTGTGGTACAACCATGAACAGTGTTGTTGGGGCTCTAATGAGACAACGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| CDS GCA 72 bp | CATCTAGGAGCTCCTCATCGCTACTCGCGCTGGTTATaGTGTTGTAGCTGTTTCTATAGTAGCCTCTATGGA | + |
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Preference number: 6 (lower is better) Translates to: HLGAPHRYSRWL*CCSCFYSSLYG Trigger: TCCATAGAGGCTACTATAGAAACAGCTACAACAGCATAACCAGCGCGAGTAGCGATGAGGAGCTCCTAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110301.2 |
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| CDS GCA 72 bp | CAAGGAGGCGTCAAGGGCTCCACGTGCTGCTTTAGTTaGTCGAGATGCTCTAAAATGTTCTTCTTTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: QGGVKGSTCCFS*SRCSKMFFFVM Trigger: CATCACAAAGAAGAACATTTTAGAGCATCTCGAGCAACTAAAGCAGCACGTGGAGCCCTTGACGCCTCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110302.8 |
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| CDS TCA 72 bp | GTGTCCCCGTCTAACAAATTGTCATCTTCAGAAGTCTaGAAGTCCATAATGGCACCTGCTCCATCTAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VSPSNKLSSSEV*KSIMAPAPSRS Trigger: GCTCCTAGATGGAGCAGGTGCCATTATGGACTTTCAGACTTCTGAAGATGACAATTTGTTAGACGGGGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004430.14 ENSMUST00000110301.2 |
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| CDS GCA 72 bp | ACCAAAGGCATCACCAACCCATTTACTGGTCATTACTaGAGCCATAAGAGGAACAATATATTCCAAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TKGITNPFTGHY*SHKRNNIFQAS Trigger: GGAGGCTTGGAATATATTGTTCCTCTTATGGCTGCAGTAATGACCAGTAAATGGGTTGGTGATGCCTTTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| CDS GCA 72 bp | GTCATTATTATTTTAAATATGAGCGCTAGGCACAACTaGCAGATAGCTGAATATACTCCAACGCCTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VIIILNMSARHN*QIAEYTPTPAG Trigger: TCCAGCAGGCGTTGGAGTATATTCAGCTATCTGGCAGTTGTGCCTAGCGCTCATATTTAAAATAATAATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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| CDS TCA 72 bp | GTCAGGTCTCTTCTGAGGGCAAATCCCACTAATCTCTaGGATTCTTTTGACATTATAACAGGAAAGCCATTA | + |
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Preference number: 6 (lower is better) Translates to: VRSLLRANPTNL*DSFDIITGKPL Trigger: TAATGGCTTTCCTGTTATAATGTCAAAAGAATCTCAGAGATTAGTGGGATTTGCCCTCAGAAGAGACCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004430.14 ENSMUST00000056508.12 ENSMUST00000093490.9 ENSMUST00000110301.2 ENSMUST00000110302.8 |
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