Pregenerated sensors for CLCN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022843Ensembl transcript IDs: ENSMUST00000007207.15, ENSMUST00000120099.8, ENSMUST00000131522.8, ENSMUST00000231381.2, ENSMUST00000232309.2
Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCGACGGTGGAGACAGCTGGGCTTTTCTTAGCTTTTGCATGTGCTaGCGCCTGCGCGCTGGGCTCAGCTGGGCTCCTAGTAGTGCTACC | + |
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Preference number: 1 (lower is better) Translates to: SDGGDSWAFLSFCMC*RLRAGLSWAPSSAT Trigger: GGTAGCACTACTAGGAGCCCAGCTGAGCCCAGCGCGCAGGCGGCAGCACATGCAAAAGCTAAGAAAAGCCCAGCTGTCTCCACCGTCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR GCA 90 bp | GTGGAGACAGCTGGGCTTTTCTTAGCTTTTGCATGTGCTGCCGCCTaGGCGCTGGGCTCAGCTGGGCTCCTAGTAGTGCTACCACCTGTG | + |
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Preference number: 1 (lower is better) Translates to: VETAGLFLAFACAAA*ALGSAGLLVVLPPV Trigger: CACAGGTGGTAGCACTACTAGGAGCCCAGCTGAGCCCAGCGCGCAGGCGGCAGCACATGCAAAAGCTAAGAAAAGCCCAGCTGTCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR CCA 90 bp | TGCAGTGCCAACCGCAGGTCCCGAAAAGTGCAGCTGAGGGCTACATaGGGTACATCCCGAACCATGATGTCCTCGACTCGCACCCGGTAC | + |
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Preference number: 1 (lower is better) Translates to: CSANRRSRKVQLRAT*GTSRTMMSSTRTRY Trigger: GTACCGGGTGCGAGTCGAGGACATCATGGTTCGGGATGTACCCCATGTAGCCCTCAGCTGCACTTTTCGGGACCTGCGGTTGGCACTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR GCA 90 bp | GACTCAGGAGACTCCACTAGGGCCAACATACGGCCCTTGGTTCTGTaGAGTGCCAACCGCAGGTCCCGAAAAGTGCAGCTGAGGGCTACA | + |
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Preference number: 1 (lower is better) Translates to: DSGDSTRANIRPLVL*SANRRSRKVQLRAT Trigger: TGTAGCCCTCAGCTGCACTTTTCGGGACCTGCGGTTGGCACTGCACAGAACCAAGGGCCGTATGTTGGCCCTAGTGGAGTCTCCTGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR CCA 90 bp | TTTCTTAGCTTTTGCATGTGCTGCCGCCTGCGCGCTGGGCTCAGCTaGGCTCCTAGTAGTGCTACCACCTGTGAGCGTTCGATGGATCCC | + |
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Preference number: 1 (lower is better) Translates to: FLSFCMCCRLRAGLS*APSSATTCERSMDP Trigger: GGGATCCATCGAACGCTCACAGGTGGTAGCACTACTAGGAGCCCAGCTGAGCCCAGCGCGCAGGCGGCAGCACATGCAAAAGCTAAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR CCA 90 bp | GGCTCAGCTGGGCTCCTAGTAGTGCTACCACCTGTGAGCGTTCGATaGATCCCAGTAGGATCATGGACTCAGGAGACTCCACTAGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: GSAGLLVVLPPVSVR*IPVGSWTQETPLGP Trigger: TGGCCCTAGTGGAGTCTCCTGAGTCCATGATCCTACTGGGATCCATCGAACGCTCACAGGTGGTAGCACTACTAGGAGCCCAGCTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR CCA 90 bp | ACTCCATGTTGCCTGTGGTACCTTCCTGCAGGCTTGTACTGTTGCTaGGCCCTCTCTTTAGAGCAGGCTTCAGGGGCTTGTGAGTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: TPCCLWYLPAGLYCC*ALSLEQASGACESA Trigger: GGCAGACTCACAAGCCCCTGAAGCCTGCTCTAAAGAGAGGGCCCAGCAACAGTACAAGCCTGCAGGAAGGTACCACAGGCAACATGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR GCA 90 bp | CTGACTCCATGTTGCCTGTGGTACCTTCCTGCAGGCTTGTACTGTTaGTGGGCCCTCTCTTTAGAGCAGGCTTCAGGGGCTTGTGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: LTPCCLWYLPAGLYC*WALSLEQASGACES Trigger: AGACTCACAAGCCCCTGAAGCCTGCTCTAAAGAGAGGGCCCAGCAACAGTACAAGCCTGCAGGAAGGTACCACAGGCAACATGGAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR CCA 90 bp | CTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTaGTCACTGCTGCTTGCAGAAGGAATACAGGCCATCCGTAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LDDPPAVRVALGSSF*SLLLAEGIQAIRKG Trigger: CCCCTTACGGATGGCCTGTATTCCTTCTGCAAGCAGCAGTGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| 3UTR TCA 90 bp | ATTCTGATGTTGCCTCCAGAGGTGGACTGCCACAGAAGAGGCTTCTaGGGGCAATGCCTGCTGACTCCATGTTGCCTGTGGTACCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: ILMLPPEVDCHRRGF*GQCLLTPCCLWYLP Trigger: AGGAAGGTACCACAGGCAACATGGAGTCAGCAGGCATTGCCCTCAGAAGCCTCTTCTGTGGCAGTCCACCTCTGGAGGCAACATCAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR GCA 90 bp | CCGGGTCTGAGTCACTCGCCAGGGAGATTCGGACCCGCTTCAGCTTaGGCTTGTCACAGGATTCTGACTTTTCCAATTCTGATGTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: PGLSHSPGRFGPASA*ACHRILTFPILMLP Trigger: AGGCAACATCAGAATTGGAAAAGTCAGAATCCTGTGACAAGCGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACTCAGACCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR TCA 90 bp | GCAACAGCATTAGCCAGGATGACAGCAATCATGACAGGCAGAATGTaGGCGATCTGGCCCGTGAGCTCGAAGACAATCACTGCTGTGGAC | + |
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Preference number: 1 (lower is better) Translates to: ATALARMTAIMTGRM*AIWPVSSKTITAVD Trigger: GTCCACAGCAGTGATTGTCTTCGAGCTCACGGGCCAGATCGCTCACATTCTGCCTGTCATGATTGCTGTCATCCTGGCTAATGCTGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR GCA 90 bp | CCGGCATTTGGGAGTGACAGACAGGTGGATCTCTGTGTTCTTTCATaGTGTGTTAGTTGCTTATGGTGGCCGGCCCAGTGTGAGGTTTAC | + |
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Preference number: 1 (lower is better) Translates to: PAFGSDRQVDLCVLS*CVSCLWWPAQCEVY Trigger: GTAAACCTCACACTGGGCCGGCCACCATAAGCAACTAACACAGCATGAAAGAACACAGAGATCCACCTGTCTGTCACTCCCAAATGCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGAACCAGGCGGCCATGCTTTCGCCCACCAGCCGCCCAAATGCCGCTCCAAGGCCCCACAGGGCACTaGGATAGTGGTAGCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LGTRRPCFRPPAAQMPLQGPTGH*DSGSQC Trigger: GCACTGGCTACCACTATCCCAGTGCCCTGTGGGGCC...TTGGAGCGGCATTTGGGCGGCTGGTGGGCGAAAGCATGGCCGCCTGGTTCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231381.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCAACATACGGCCCTTGGTTCTGTGCAGTGCCAACCGCAGGTCCCGAAAAGACCCGGTACTGCTGGTaGCGGCCCCAGCCCAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GPTYGPWFCAVPTAGPEKTRYCW*RPQPSS Trigger: TGAGCTGGGCTGGGGCCGCCACCAGCAGTACCGGGT...CTTTTCGGGACCTGCGGTTGGCACTGCACAGAACCAAGGGCCGTATGTTGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR-3UTR CCA 90 bp | GCCATGCTTTCGCCCACCAGCCGCCCAAATGCCGCTCCAATGACAAAGACAGGCTCCTCAACCAGGCCCTaGCGGACCCACGTCCGGTTG | + |
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Preference number: 2 (lower is better) Translates to: AMLSPTSRPNAAPMTKTGSSTRP*RTHVRL Trigger: CAACCGGACGTGGGTCCGCCAGGGCCTGGTTGAGGA...GCCTGTCTTTGTCATTGGAGCGGCATTTGGGCGGCTGGTGGGCGAAAGCATGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231381.2 |
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| 3UTR CAA 90 bp | AGGATCATGGACTCAGGAGACTCCACTAGGGCCAACATACGGCCCTaGGTTCTGTGCAGTGCCAACCGCAGGTCCCGAAAAGTGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: RIMDSGDSTRANIRP*VLCSANRRSRKVQL Trigger: CAGCTGCACTTTTCGGGACCTGCGGTTGGCACTGCACAGAACCAAGGGCCGTATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGTCACTCGCCAGGGAGATTCGGACCCGCTTCAGCTTGCGCTTGTCACAGGCTGCTGACTCCATGTTaGCTGTGGTACCTTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: LSHSPGRFGPASACACHRLLTPC*LWYLPA Trigger: TGCAGGAAGGTACCACAGGCAACATGGAGTCAGCAG...CCTGTGACAAGCGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR-3UTR GCA 90 bp | CCCACCAGCCGCCCAAATGCCGCTCCAATGACAAAGACAGGCATGAAGGCCCCATCCAGGCCTGTGAAGTaGTGGGTAGCTCTAGATCCT | + |
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Preference number: 2 (lower is better) Translates to: PTSRPNAAPMTKTGMKAPSRPVK*WVALDP Trigger: AGGATCTAGAGCTACCCAGCACTTCACAGGCCTGGA...TGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCGGCATTTGGGCGGCTGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231381.2 |
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| 3UTR CAA 90 bp | CAATGCCTGCTGACTCCATGTTGCCTGTGGTACCTTCCTGCAGGCTaGTACTGTTGCTGGGCCCTCTCTTTAGAGCAGGCTTCAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: QCLLTPCCLWYLPAG*YCCWALSLEQASGA Trigger: AGCCCCTGAAGCCTGCTCTAAAGAGAGGGCCCAGCAACAGTACAAGCCTGCAGGAAGGTACCACAGGCAACATGGAGTCAGCAGGCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGGGGGCAGGGTCGATTTTGCAGTCACTGAAGTTGACTGGCTCATCTAGCATGACAGGCAGAATGTaGGCGATCTGGCCCGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: WKGAGSILQSLKLTGSSSMTGRM*AIWPVS Trigger: GCTCACGGGCCAGATCGCTCACATTCTGCCTGTCAT...GCTAGATGAGCCAGTCAACTTCAGTGACTGCAAAATCGACCCTGCCCCCTTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR-3UTR GCA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGCTGGTCACTGCTGCTTaGAGAAGGAATACAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: RTPPHPARTLDDPPAVRVLVTAA*RRNTGH Trigger: ATGGCCTGTATTCCTTCTGCAAGCAGCAGTGACCAG...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| 3UTR CAA 90 bp | TCCGGGTCTGAGTCACTCGCCAGGGAGATTCGGACCCGCTTCAGCTaGCGCTTGTCACAGGATTCTGACTTTTCCAATTCTGATGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: SGSESLAREIRTRFS*RLSQDSDFSNSDVA Trigger: GGCAACATCAGAATTGGAAAAGTCAGAATCCTGTGACAAGCGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACTCAGACCCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR CAA 90 bp | TCTGAGTCACTCGCCAGGGAGATTCGGACCCGCTTCAGCTTGCGCTaGTCACAGGATTCTGACTTTTCCAATTCTGATGTTGCCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SESLAREIRTRFSLR*SQDSDFSNSDVASR Trigger: TCTGGAGGCAACATCAGAATTGGAAAAGTCAGAATCCTGTGACAAGCGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR-3UTR CCA 90 bp | GATTCTGACTTTTCCAATTCTGATGTTGCCTCCAGAGGTGGACTGCCACAGAAGCAGCTGAGGGCTACATaGGGTACATCCCGAACCATG | + |
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Preference number: 2 (lower is better) Translates to: DSDFSNSDVASRGGLPQKQLRAT*GTSRTM Trigger: CATGGTTCGGGATGTACCCCATGTAGCCCTCAGCTG...CTTCTGTGGCAGTCCACCTCTGGAGGCAACATCAGAATTGGAAAAGTCAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR TCA 72 bp | CTGGGCCCTCTCTTTAGAGCAGGCTTCAGGGGCTTGTaGGTCTGCCCGTGGGCTCCAGAGAAGCCCGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: LGPLFRAGFRGL*VCPWAPEKPES Trigger: GGACTCGGGCTTCTCTGGAGCCCACGGGCAGACTCACAAGCCCCTGAAGCCTGCTCTAAAGAGAGGGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR GCA 72 bp | TCCGACGGTGGAGACAGCTGGGCTTTTCTTAGCTTTTaGATGTGCTGCCGCCTGCGCGCTGGGCTCAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SDGGDSWAFLSF*MCCRLRAGLSW Trigger: CCAGCTGAGCCCAGCGCGCAGGCGGCAGCACATGCAAAAGCTAAGAAAAGCCCAGCTGTCTCCACCGTCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR CCA 72 bp | TTTTGCATGTGCTGCCGCCTGCGCGCTGGGCTCAGCTaGGCTCCTAGTAGTGCTACCACCTGTGAGCGTTCG | + |
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Preference number: 3 (lower is better) Translates to: FCMCCRLRAGLS*APSSATTCERS Trigger: CGAACGCTCACAGGTGGTAGCACTACTAGGAGCCCAGCTGAGCCCAGCGCGCAGGCGGCAGCACATGCAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR GCA 72 bp | AGACATTGGCACGTGGTGGGCTCCAGGCCTGTGAAGTaGTGGGTAGCTCTAGATCCTCAACCAGGCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: RHWHVVGSRPVK*WVALDPQPGPG Trigger: GCCAGGGCCTGGTTGAGGATCTAGAGCTACCCAGCACTTCACAGGCCTGGAGCCCACCACGTGCCAATGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231381.2 |
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| 3UTR-3UTR CAA 90 bp | CTGAGTCACTCGCCAGGGAGATTCGGACCCGCTTCAGCTTGCGCTTGTCACAGGTACCTTCCTGCAGGCTaGTACTGTTGCTGGGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: LSHSPGRFGPASACACHRYLPAG*YCCWAL Trigger: GAGGGCCCAGCAACAGTACAAGCCTGCAGGAAGGTA...CCTGTGACAAGCGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR GCA 72 bp | GACTCCACTAGGGCCAACATACGGCCCTTGGTTCTGTaGAGTGCCAACCGCAGGTCCCGAAAAGTGCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: DSTRANIRPLVL*SANRRSRKVQL Trigger: CAGCTGCACTTTTCGGGACCTGCGGTTGGCACTGCACAGAACCAAGGGCCGTATGTTGGCCCTAGTGGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR GCA 72 bp | TATCTGTGTGAATCCCATCTGGGAACCAGGCGGCCATaGTTTCGCCCACCAGCCGCCCAAATGCCGCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: YLCESHLGTRRP*FRPPAAQMPLQ Trigger: TTGGAGCGGCATTTGGGCGGCTGGTGGGCGAAAGCATGGCCGCCTGGTTCCCAGATGGGATTCACACAGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231381.2 |
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| 3UTR TCA 72 bp | TTGCCTCCAGAGGTGGACTGCCACAGAAGAGGCTTCTaGGGGCAATGCCTGCTGACTCCATGTTGCCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: LPPEVDCHRRGF*GQCLLTPCCLW Trigger: CCACAGGCAACATGGAGTCAGCAGGCATTGCCCTCAGAAGCCTCTTCTGTGGCAGTCCACCTCTGGAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR CCA 72 bp | CCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTaGCCTTGGGTTCCAGTTTCTGGTCACTGCTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: PPGHLMIPQQLG*PWVPVSGHCCL Trigger: CAAGCAGCAGTGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| 3UTR CCA 72 bp | AACCGCAGGTCCCGAAAAGTGCAGCTGAGGGCTACATaGGGTACATCCCGAACCATGATGTCCTCGACTCGC | + |
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Preference number: 3 (lower is better) Translates to: NRRSRKVQLRAT*GTSRTMMSSTR Trigger: GCGAGTCGAGGACATCATGGTTCGGGATGTACCCCATGTAGCCCTCAGCTGCACTTTTCGGGACCTGCGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR CCA 72 bp | ACTCAGGAGACTCCACTAGGGCCAACATACGGCCCTTaGTTCTGTGCAGTGCCAACCGCAGGTCCCGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: TQETPLGPTYGP*FCAVPTAGPEK Trigger: CTTTTCGGGACCTGCGGTTGGCACTGCACAGAACCAAGGGCCGTATGTTGGCCCTAGTGGAGTCTCCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR-3UTR CAA 90 bp | CTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTTCTGGTCACTGCTGCTaGCAGAAGGAATACAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: LIPPGHLMIPQQLGWPWVSGHCC*QKEYRP Trigger: TGGCCTGTATTCCTTCTGCAAGCAGCAGTGACCAGA...AACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| 3UTR GCA 72 bp | TGTTGCCTGTGGTACCTTCCTGCAGGCTTGTACTGTTaGTGGGCCCTCTCTTTAGAGCAGGCTTCAGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: CCLWYLPAGLYC*WALSLEQASGA Trigger: AGCCCCTGAAGCCTGCTCTAAAGAGAGGGCCCAGCAACAGTACAAGCCTGCAGGAAGGTACCACAGGCAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR CCA 72 bp | CCACCTGTGAGCGTTCGATGGATCCCAGTAGGATCATaGACTCAGGAGACTCCACTAGGGCCAACATACGGC | + |
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Preference number: 3 (lower is better) Translates to: PPVSVRWIPVGS*TQETPLGPTYG Trigger: GCCGTATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGATCCTACTGGGATCCATCGAACGCTCACAGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR CCA 72 bp | TGCCTGTGGTACCTTCCTGCAGGCTTGTACTGTTGCTaGGCCCTCTCTTTAGAGCAGGCTTCAGGGGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: CLWYLPAGLYCC*ALSLEQASGAC Trigger: ACAAGCCCCTGAAGCCTGCTCTAAAGAGAGGGCCCAGCAACAGTACAAGCCTGCAGGAAGGTACCACAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR CCA 72 bp | GGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTaGGTTCCAGTTTCTGGTCACTGCTGCTTGCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: GHLMIPQQLGWP*VPVSGHCCLQK Trigger: CTTCTGCAAGCAGCAGTGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| 3UTR CCA 72 bp | GGGCTCCTAGTAGTGCTACCACCTGTGAGCGTTCGATaGATCCCAGTAGGATCATGGACTCAGGAGACTCCA | + |
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Preference number: 3 (lower is better) Translates to: GLLVVLPPVSVR*IPVGSWTQETP Trigger: TGGAGTCTCCTGAGTCCATGATCCTACTGGGATCCATCGAACGCTCACAGGTGGTAGCACTACTAGGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR GCA 72 bp | TTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCACTGCTaGTTGCAGAAGGAATACAGGCCATCCGTAAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: LGWPWVPVSGHC*LQKEYRPSVRG Trigger: ACCCCTTACGGATGGCCTGTATTCCTTCTGCAAGCAGCAGTGACCAGAAACTGGAACCCAAGGCCACCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| 3UTR GCA 72 bp | CAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCACTaGTGCTTGCAGAAGGAATACAGGCCATCCGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: QLGWPWVPVSGH*CLQKEYRPSVR Trigger: CCTTACGGATGGCCTGTATTCCTTCTGCAAGCAGCAGTGACCAGAAACTGGAACCCAAGGCCACCCTAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| 3UTR GCA 72 bp | ATGCCTGCTGACTCCATGTTGCCTGTGGTACCTTCCTaGAGGCTTGTACTGTTGCTGGGCCCTCTCTTTAGA | + |
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Preference number: 3 (lower is better) Translates to: MPADSMLPVVPS*RLVLLLGPLFR Trigger: TCTAAAGAGAGGGCCCAGCAACAGTACAAGCCTGCAGGAAGGTACCACAGGCAACATGGAGTCAGCAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR TCA 72 bp | GCGGTGGTGCATGGCTTTAATCCCGGCATTTGGGAGTaGCAGACAGGTGGATCTCTGTGTTCTTTCATGCTG | + |
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Preference number: 3 (lower is better) Translates to: AVVHGFNPGIWE*QTGGSLCSFML Trigger: CAGCATGAAAGAACACAGAGATCCACCTGTCTGTCACTCCCAAATGCCGGGATTAAAGCCATGCACCACCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR GCA 72 bp | AGTCACTCGCCAGGGAGATTCGGACCCGCTTCAGCTTaGGCTTGTCACAGGATTCTGACTTTTCCAATTCTG | + |
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Preference number: 3 (lower is better) Translates to: SHSPGRFGPASA*ACHRILTFPIL Trigger: CAGAATTGGAAAAGTCAGAATCCTGTGACAAGCGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR GCA 72 bp | GGGAGTGACAGACAGGTGGATCTCTGTGTTCTTTCATaGTGTGTTAGTTGCTTATGGTGGCCGGCCCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: GSDRQVDLCVLS*CVSCLWWPAQC Trigger: ACACTGGGCCGGCCACCATAAGCAACTAACACAGCATGAAAGAACACAGAGATCCACCTGTCTGTCACTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| 3UTR-3UTR CAA 90 bp | CTGAAGTTGACTGGCTCATCTAGCTGCTGTTCTTCCCACTCTAAGATCTCCTCAGCCAACATACGGCCCTaGGTTCTGTGCAGTGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LKLTGSSSCCSSHSKISSANIRP*VLCSAN Trigger: GTTGGCACTGCACAGAACCAAGGGCCGTATGTTGGC...TGAGGAGATCTTAGAGTGGGAAGAACAGCAGCTAGATGAGCCAGTCAACTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| 3UTR TCA 72 bp | TTAGCCAGGATGACAGCAATCATGACAGGCAGAATGTaGGCGATCTGGCCCGTGAGCTCGAAGACAATCACT | + |
|
Preference number: 3 (lower is better) Translates to: LARMTAIMTGRM*AIWPVSSKTIT Trigger: AGTGATTGTCTTCGAGCTCACGGGCCAGATCGCTCACATTCTGCCTGTCATGATTGCTGTCATCCTGGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| 3UTR GCA 72 bp | CAGGTGGATCTCTGTGTTCTTTCATGCTGTGTTAGTTaGTTATGGTGGCCGGCCCAGTGTGAGGTTTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: QVDLCVLSCCVS*LWWPAQCEVYR Trigger: TCTGTAAACCTCACACTGGGCCGGCCACCATAAGCAACTAACACAGCATGAAAGAACACAGAGATCCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| 3UTR CCA 72 bp | TTATGGTGGCCGGCCCAGTGTGAGGTTTACAGACTGTaGAGTTGTATTACTGGTCTACAGAGTGAGTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LWWPAQCEVYRL*SCITGLQSEFQ Trigger: CTGGAACTCACTCTGTAGACCAGTAATACAACTCCACAGTCTGTAAACCTCACACTGGGCCGGCCACCATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| 3UTR CCA 72 bp | GATCTCTGTGTTCTTTCATGCTGTGTTAGTTGCTTATaGTGGCCGGCCCAGTGTGAGGTTTACAGACTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: DLCVLSCCVSCL*WPAQCEVYRLW Trigger: CCACAGTCTGTAAACCTCACACTGGGCCGGCCACCATAAGCAACTAACACAGCATGAAAGAACACAGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGGGAACCAGGCGGCCATGCTTTCGCCCACCAGCCGCCCAAATGCCGCTCCGACCCCTCCGATTGGTaGGGCAAAGCAGCAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IWEPGGHAFAHQPPKCRSDPSDW*GKAAAH Trigger: GTGGGCTGCTGCTTTGCCGCACCAATCGGAGGGGTC...GGAGCGGCATTTGGGCGGCTGGTGGGCGAAAGCATGGCCGCCTGGTTCCCAGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231381.2 |
||
| CDS-3UTR TCA 90 bp | CATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCGGCTTCAGGGGCTTGTaGGTCTGCCCGTGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPARTLDDPPAVRVALGSGFRGL*VCPWAP Trigger: TGGAGCCCACGGGCAGACTCACAAGCCCCTGAAGCC...GGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | ACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCGACCCCTCCGATTGGTaGGGCAAAGCAGCAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPPHPARTLDDPPAVRVADPSDW*GKAAAH Trigger: GTGGGCTGCTGCTTTGCCGCACCAATCGGAGGGGTC...GGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | CCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGTGTGTCACTGCTCCTaGGAGTGCAGCCGCCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: PPHPARTLDDPPAVRVALVCHCS*ECSRPD Trigger: GTCGGGGCGGCTGCACTCGCAGGAGCAGTGACACAC...CAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | CGGCCCTTGGTTCTGTGCAGTGCCAACCGCAGGTCCCGAAAAGTGCAGCTGAGGGGCCCCACAGGGCACTaGGATAGTGGTAGCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPLVLCSANRRSRKVQLRGPTGH*DSGSQC Trigger: GCACTGGCTACCACTATCCCAGTGCCCTGTGGGGCC...CCTCAGCTGCACTTTTCGGGACCTGCGGTTGGCACTGCACAGAACCAAGGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR CCA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGACCCGGTACTGCTGGTaGCGGCCCCAGCCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTPPHPARTLDDPPAVRVTRYCW*RPQPSS Trigger: TGAGCTGGGCTGGGGCCGCCACCAGCAGTACCGGGT...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | ACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCGTCCGCTCCACCAGCTaGAAGGGGGCAGGGTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: TPPHPARTLDDPPAVRVAVRSTS*KGAGSI Trigger: AATCGACCCTGCCCCCTTCCAGCTGGTGGAGCGGAC...GGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR TCA 90 bp | ACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCGGGAGAGGAACTTGCTaGGAAGGGCGGCACACATGC | + |
|
Preference number: 4 (lower is better) Translates to: TPPHPARTLDDPPAVRVAGRGTC*EGRHTC Trigger: GCATGTGTGCCGCCCTTCTCAGCAAGTTCCTCTCCC...GGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | GGTCTGAGTCACTCGCCAGGGAGATTCGGACCCGCTTCAGCTTGCGCTTGTCACGACCCCTCCGATTGGTaGGGCAAAGCAGCAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLSHSPGRFGPASACACHDPSDW*GKAAAH Trigger: GTGGGCTGCTGCTTTGCCGCACCAATCGGAGGGGTC...GTGACAAGCGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACTCAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR GCA 90 bp | CCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGCGGCCCTTGGTTCTGTaGAGTGCCAACCGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPHPARTLDDPPAVRVALRPLVL*SANRRS Trigger: GGACCTGCGGTTGGCACTGCACAGAACCAAGGGCCG...CAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | CCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGCCCCCAGAGCGCATaGACCTCAGTGGTCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPHPARTLDDPPAVRVALGPQSA*TSVVSV Trigger: CACAGAGACCACTGAGGTGCATGCGCTCTGGGGGCC...CAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | CCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCCTCAACCAGGCCCTaGCGGACCCACGTCCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPGHLMIPQQLGWPWVPVSSTRP*RTHVRL Trigger: CAACCGGACGTGGGTCCGCCAGGGCCTGGTTGAGGA...AACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR TCA 90 bp | CCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTAGAGCTGTCCGGCCATaGACTGTCCAAAGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PARTLDDPPAVRVALGSSRAVRP*TVQSQG Trigger: CCCCTGGCTTTGGACAGTTCATGGCCGGACAGCTCT...ACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | CATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGCCCAGCTGACCAGTaGCATGAGGAGCCCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HPARTLDDPPAVRVALGSSPADQ*HEEPQQ Trigger: CTGTTGGGGCTCCTCATGGCACTGGTCAGCTGGGCT...GGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | CCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGCACTGTGTGTGTCACTaGTCCTGCGAGTGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PPHPARTLDDPPAVRVALHCVCH*SCECSR Trigger: GCGGCTGCACTCGCAGGAGCAGTGACACACACAGTG...CAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | ACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCGGGCGGCACACATGCTaGCAATGTGCACAAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPPHPARTLDDPPAVRVAGRHTC*QCAQRV Trigger: GACCCTTTGTGCACATTGCCAGCATGTGTGCCGCCC...GGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | ACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCGCGCATGCACCTCAGTaGTCTCTGTGTCACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPPHPARTLDDPPAVRVAAHAPQ*SLCHCC Trigger: GCAGCAGTGACACAGAGACCACTGAGGTGCATGCGC...GGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR TCA 90 bp | CATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCATGACAGGCAGAATGTaGGCGATCTGGCCCGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPARTLDDPPAVRVALGSMTGRM*AIWPVS Trigger: GCTCACGGGCCAGATCGCTCACATTCTGCCTGTCAT...GGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | GCTACATGGGGTACATCCCGAACCATGATGTCCTCGACTCGCACCCGGTACTGCAGGGTCTGCTCGTACTaGAGCGCTCGAGGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: ATWGTSRTMMSSTRTRYCRVCSY*SARGSI Trigger: GATGGAGCCTCGAGCGCTGCAGTACGAGCAGACCCT...GCAGTACCGGGTGCGAGTCGAGGACATCATGGTTCGGGATGTACCCCATGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR GCA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGCTTAGCTTTTGCATGTaGTGCCGCCTGCGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTPPHPARTLDDPPAVRVLSFCM*CRLRAG Trigger: CCCAGCGCGCAGGCGGCAGCACATGCAAAAGCTAAG...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR CCA 90 bp | GGTCTGAGTCACTCGCCAGGGAGATTCGGACCCGCTTCAGCTTGCGCTTGTCACGGGCGGCACACATGCTaGCAATGTGCACAAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLSHSPGRFGPASACACHGRHTC*QCAQRV Trigger: GACCCTTTGTGCACATTGCCAGCATGTGTGCCGCCC...GTGACAAGCGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACTCAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR CCA 90 bp | TCATGGACTCAGGAGACTCCACTAGGGCCAACATACGGCCCTTGGTTCTGTGCATCCTCAACCAGGCCCTaGCGGACCCACGTCCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWTQETPLGPTYGPWFCASSTRP*RTHVRL Trigger: CAACCGGACGTGGGTCCGCCAGGGCCTGGTTGAGGA...TGCACAGAACCAAGGGCCGTATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR TCA 90 bp | CTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTAAGGCCCCGAGTTCCTaGGTGTACCGGCCATACATC | + |
|
Preference number: 4 (lower is better) Translates to: LIPPGHLMIPQQLGWPWVKAPSS*VYRPYI Trigger: GATGTATGGCCGGTACACTCAGGAACTCGGGGCCTT...AACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR GCA 90 bp | CGAAAAGTGCAGCTGAGGGCTACATGGGGTACATCCCGAACCATGATGTCCTCGCAAGGGGCATCCCACTaGCCAGGGCACAGGTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKVQLRATWGTSRTMMSSQGASH*PGHRLA Trigger: GGCTAACCTGTGCCCTGGGCAGTGGGATGCCCCTTG...CGAGGACATCATGGTTCGGGATGTACCCCATGTAGCCCTCAGCTGCACTTTTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR GCA 90 bp | GGGCTTTTCTTAGCTTTTGCATGTGCTGCCGCCTGCGCGCTGGGCTCAGCTGGGAAGGCTGGCAGCTCTTaGAGGTCAAATGGGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GLFLAFACAAACALGSAGKAGSS*RSNGKS Trigger: CGACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTT...CCCAGCTGAGCCCAGCGCGCAGGCGGCAGCACATGCAAAAGCTAAGAAAAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR GCA 90 bp | GGTGGGCTCCAGGCCTGTGAAGTGCTGGGTAGCTCTAGATCCTCAACCAGGCCCAAGGCTGGCAGCTCTTaGAGGTCAAATGGGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GGLQACEVLGSSRSSTRPKAGSS*RSNGKS Trigger: CGACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTT...GGGCCTGGTTGAGGATCTAGAGCTACCCAGCACTTCACAGGCCTGGAGCCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231381.2 |
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| CDS-3UTR GCA 90 bp | CATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCCTTGGTTCTGTGCAGTaGCAACCGCAGGTCCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HPARTLDDPPAVRVALGSLGSVQ*QPQVPK Trigger: TTTCGGGACCTGCGGTTGGCACTGCACAGAACCAAG...GGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR CCA 90 bp | CCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGAGTCTTCACCGACCCTaGACACCAGGAACTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPHPARTLDDPPAVRVALSLHRP*TPGTCG Trigger: GCCACAAGTTCCTGGTGTCCAGGGTCGGTGAAGACT...CAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | CTGAGTCACTCGCCAGGGAGATTCGGACCCGCTTCAGCTTGCGCTTGTCACAGGAGTCTTCACCGACCCTaGACACCAGGAACTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSHSPGRFGPASACACHRSLHRP*TPGTCG Trigger: GCCACAAGTTCCTGGTGTCCAGGGTCGGTGAAGACT...CCTGTGACAAGCGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR CCA 90 bp | CTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTTGTCACTGCTGCTGGTaGCACTGTCCCGGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIPPGHLMIPQQLGWPWVCHCCW*HCPGNW Trigger: CCAGTTTCCGGGACAGTGCCACCAGCAGCAGTGACA...AACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR TCA 90 bp | ACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCGGTTGTCAAACAGAGTaGCTAGGGTCTCCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPPHPARTLDDPPAVRVAGCQTE*LGSPSV Trigger: CACAGAAGGAGACCCTAGTCACTCTGTTTGACAACC...GGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR TCA 90 bp | TCTGTGCAGTGCCAACCGCAGGTCCCGAAAAGTGCAGCTGAGGGCTACATGGGGGTGCTGCTATCTGTGTaGATCCCATCTGGGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVQCQPQVPKSAAEGYMGVLLSV*IPSGNQ Trigger: CTGGTTCCCAGATGGGATTCACACAGATAGCAGCAC...CCCCATGTAGCCCTCAGCTGCACTTTTCGGGACCTGCGGTTGGCACTGCACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR GCA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGCCATACATCAGGGTCTaGTCGTACTGCAGCGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RTPPHPARTLDDPPAVRVPYIRV*SYCSAR Trigger: TCGAGCGCTGCAGTACGAGCAGACCCTGATGTATGG...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCACAAGGGGCATCCCACTaGCCAGGGCACAGGTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLDDPPAVRVALGSSFWSQGASH*PGHRLA Trigger: GGCTAACCTGTGCCCTGGGCAGTGGGATGCCCCTTG...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | CGGCCCTTGGTTCTGTGCAGTGCCAACCGCAGGTCCCGAAAAGTGCAGCTGAGGCACATGCTGGCAATGTaGACAAAGGGTCCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPLVLCSANRRSRKVQLRHMLAM*TKGPSL Trigger: CAAAGAGGGACCCTTTGTGCACATTGCCAGCATGTG...CCTCAGCTGCACTTTTCGGGACCTGCGGTTGGCACTGCACAGAACCAAGGGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR GCA 90 bp | CCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGTCCAGGCCTGTGAAGTaGTGGGTAGCTCTAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPHPARTLDDPPAVRVALSRPVK*WVALDP Trigger: AGGATCTAGAGCTACCCAGCACTTCACAGGCCTGGA...CAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGGACCCGCTTCAGCTTaGGCTTGTCACAGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTPPHPARTLDDPPAVRVGPASA*ACHRIL Trigger: CAGAATCCTGTGACAAGCGCAAGCTGAAGCGGGTCC...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | CTGAGTCACTCGCCAGGGAGATTCGGACCCGCTTCAGCTTGCGCTTGTCACAGGTGTGGGGCCAGGATCTaGGTGAATCCAGCAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHSPGRFGPASACACHRCGARI*VNPAEK Trigger: TTTCTCTGCTGGATTCACCCAGATCCTGGCCCCACA...CCTGTGACAAGCGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR CCA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCAGGCCCCACAGGGCACTaGGATAGTGGTAGCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLDDPPAVRVALGSSFWSGPTGH*DSGSQC Trigger: GCACTGGCTACCACTATCCCAGTGCCCTGTGGGGCC...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGCAGCTGAGGGCTACATaGGGTACATCCCGAACCATG | + |
|
Preference number: 4 (lower is better) Translates to: RTPPHPARTLDDPPAVRVQLRAT*GTSRTM Trigger: CATGGTTCGGGATGTACCCCATGTAGCCCTCAGCTG...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGCCAACATACGGCCCTTaGTTCTGTGCAGTGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RTPPHPARTLDDPPAVRVPTYGP*FCAVPT Trigger: GGTTGGCACTGCACAGAACCAAGGGCCGTATGTTGG...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | CCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTGGCTTGTACTGTTGCTaGGCCCTCTCTTTAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PARTLDDPPAVRVALGSSGLYCC*ALSLEQ Trigger: CTGCTCTAAAGAGAGGGCCCAGCAACAGTACAAGCC...ACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| 3UTR CAA 72 bp | GACTCAGGAGACTCCACTAGGGCCAACATACGGCCCTaGGTTCTGTGCAGTGCCAACCGCAGGTCCCGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DSGDSTRANIRP*VLCSANRRSRK Trigger: TTTTCGGGACCTGCGGTTGGCACTGCACAGAACCAAGGGCCGTATGTTGGCCCTAGTGGAGTCTCCTGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR TCA 90 bp | AGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGGAGGGCAATGCCTGCTaGCTCCATGTTGCCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLDDPPAVRVALGSSFWEGNAC*LHVACG Trigger: ACCACAGGCAACATGGAGTCAGCAGGCATTGCCCTC...CCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR TCA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGTCCACTCCCAGCAATaGGAAGATGGTGTGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTPPHPARTLDDPPAVRVVHSQQ*EDGVGL Trigger: AAGACCCACACCATCTTCTCATTGCTGGGAGTGGAC...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR TCA 90 bp | CCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTGTCTGCCAATGCTGGTaGCATAAGCATGGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PPGHLMIPQQLGWPWVPVVCQCW*HKHGPL Trigger: GAGTGGACCATGCTTATGTCACCAGCATTGGCAGAC...AACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCAAGGGTCTGCTCGTACTaGAGCGCTCGAGGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLDDPPAVRVALGSSFWSRVCSY*SARGSI Trigger: GATGGAGCCTCGAGCGCTGCAGTACGAGCAGACCCT...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | CCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTCACATGCTGGCAATGTaGACAAAGGGTCCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PARTLDDPPAVRVALGSSHMLAM*TKGPSL Trigger: CAAAGAGGGACCCTTTGTGCACATTGCCAGCATGTG...ACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | GCTACATGGGGTACATCCCGAACCATGATGTCCTCGACTCGCACCCGGTACTGCTCCAGGCCTGTGAAGTaGTGGGTAGCTCTAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATWGTSRTMMSSTRTRYCSRPVK*WVALDP Trigger: AGGATCTAGAGCTACCCAGCACTTCACAGGCCTGGA...GCAGTACCGGGTGCGAGTCGAGGACATCATGGTTCGGGATGTACCCCATGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR GCA 90 bp | CCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTGCAGGCTTGTACTGTTaGTGGGCCCTCTCTTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPGHLMIPQQLGWPWVPVAGLYC*WALSLE Trigger: CTCTAAAGAGAGGGCCCAGCAACAGTACAAGCCTGC...AACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGCCTGTGGTACCTTCCTaGAGGCTTGTACTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTPPHPARTLDDPPAVRVPVVPS*RLVLLL Trigger: CAGCAACAGTACAAGCCTGCAGGAAGGTACCACAGG...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | CCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTCTGCTGACTCCATGTTaGCTGTGGTACCTTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPGHLMIPQQLGWPWVPVLLTPC*LWYLPA Trigger: TGCAGGAAGGTACCACAGGCAACATGGAGTCAGCAG...AACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | CTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTATGGTGTGGGTCTTGTaGAAAGAAGTCCGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LIPPGHLMIPQQLGWPWVMVWVL*KEVRST Trigger: GGTGGAGCGGACTTCTTTGCACAAGACCCACACCAT...AACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | AGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCTCTGTGTCACTGCTaGTGGTGGCACTGTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLDDPPAVRVALGSSFWSLCHC*WWHCPG Trigger: TCCGGGACAGTGCCACCAGCAGCAGTGACACAGAGA...CCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | CTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCTCTTGCAGGTCAAATaGGAAGTCGAGTCGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LIPPGHLMIPQQLGWPWVLLQVK*EVESEP Trigger: CGGTTCCGACTCGACTTCCCATTTGACCTGCAAGAG...AACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | CCCAAATGCCGCTCCAATGACAAAGACAGGCATGAAGGCCCCACAGGGCACTGGCTCTTGCAGGTCAAATaGGAAGTCGAGTCGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: PKCRSNDKDRHEGPTGHWLLQVK*EVESEP Trigger: CGGTTCCGACTCGACTTCCCATTTGACCTGCAAGAG...CCAGTGCCCTGTGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCGGCATTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231381.2 |
||
| CDS-3UTR CCA 90 bp | CCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTGCTTCCGCATCACCTaGACAATCTTCCGGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPGHLMIPQQLGWPWVPVCFRIT*TIFRFR Trigger: CCTGAACCGGAAGATTGTCCAGGTGATGCGGAAGCA...AACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | AGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGCTGTGTCACTGCTGCTaGTGGCACTGTCCCGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RTLDDPPAVRVALGSSFWLCHCC*WHCPGN Trigger: GTTTCCGGGACAGTGCCACCAGCAGCAGTGACACAG...CCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | ACCAGAGTAAGGAAGACATTGGCACGTGGTGGGCTCCAGGCCTGTGAAGTGCTGGGAAGAGCAGCCGTCTaGACAATCTTCCGGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRVRKTLARGGLQACEVLGRAAV*TIFRFR Trigger: CCTGAACCGGAAGATTGTCCAGACGGCTGCTCTTCC...CAGCACTTCACAGGCCTGGAGCCCACCACGTGCCAATGTCTTCCTTACTCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231381.2 |
||
| 3UTR CAA 72 bp | ATGTTGCCTGTGGTACCTTCCTGCAGGCTTGTACTGTaGCTGGGCCCTCTCTTTAGAGCAGGCTTCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MLPVVPSCRLVL*LGPLFRAGFRG Trigger: GCCCCTGAAGCCTGCTCTAAAGAGAGGGCCCAGCAACAGTACAAGCCTGCAGGAAGGTACCACAGGCAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR TCA 90 bp | TCGATGGATCCCAGTAGGATCATGGACTCAGGAGACTCCACTAGGGCCAACATAGGGAGAGGAACTTGCTaGGAAGGGCGGCACACATGC | + |
|
Preference number: 4 (lower is better) Translates to: SMDPSRIMDSGDSTRANIGRGTC*EGRHTC Trigger: GCATGTGTGCCGCCCTTCTCAGCAAGTTCCTCTCCC...TATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGATCCTACTGGGATCCATCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR GCA 90 bp | AGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGGAAGGGCGGCACACATaGTGGCAATGTGCACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLDDPPAVRVALGSSFWEGRHT*WQCAQR Trigger: CCTTTGTGCACATTGCCAGCATGTGTGCCGCCCTTC...CCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | ACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCGACTTTAACACCCTGTaGTGTGACAGAGCCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TPPHPARTLDDPPAVRVADFNTL*CDRAFN Trigger: ATTGAAGGCTCTGTCACAGCACAGGGTGTTAAAGTC...GGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCATGGTCTCTGTGTCACTaGTGCTGGTGGCACTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLDDPPAVRVALGSSFWSWSLCH*CWWHCP Trigger: GGGACAGTGCCACCAGCAGCAGTGACACAGAGACCA...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | CCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGACTGGAGTAAGATGTTaGTGTTTAAGCCCCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PPHPARTLDDPPAVRVALTGVRC*CLSPGT Trigger: TGTCCCGGGGCTTAAACACCAACATCTTACTCCAGT...CAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCTCCTAGTAGTGCTACCACCTGTGAGCGTTCGATGGATCCCAGTAGGACTCTTGCAGGTCAAATaGGAAGTCGAGTCGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: AGLLVVLPPVSVRWIPVGLLQVK*EVESEP Trigger: CGGTTCCGACTCGACTTCCCATTTGACCTGCAAGAG...TCCTACTGGGATCCATCGAACGCTCACAGGTGGTAGCACTACTAGGAGCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR CCA 90 bp | CTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTGACGGTGGAGACAGCTaGGCTTTTCTTAGCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LIPPGHLMIPQQLGWPWVDGGDS*AFLSFC Trigger: GCAAAAGCTAAGAAAAGCCCAGCTGTCTCCACCGTC...AACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR TCA 90 bp | AATCATGACAGGCAGAATGTGAGCGATCTGGCCCGTGAGCTCGAAGACAATCACAAGGCCCCGAGTTCCTaGGTGTACCGGCCATACATC | + |
|
Preference number: 4 (lower is better) Translates to: NHDRQNVSDLARELEDNHKAPSS*VYRPYI Trigger: GATGTATGGCCGGTACACTCAGGAACTCGGGGCCTT...GTGATTGTCTTCGAGCTCACGGGCCAGATCGCTCACATTCTGCCTGTCATGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCCAGGGCTACAGAGAAACCCTTGTGCAAAGAAGTCCGCTCCACCAGCTGGGGTTGTCAAACAGAGTaGCTAGGGTCTCCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TARATEKPLCKEVRSTSWGCQTE*LGSPSV Trigger: CACAGAAGGAGACCCTAGTCACTCTGTTTGACAACC...CCAGCTGGTGGAGCGGACTTCTTTGCACAAGGGTTTCTCTGTAGCCCTGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR GCA 90 bp | AGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGAAGGCTGGCAGCTCTTaGAGGTCAAATGGGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RTLDDPPAVRVALGSSFWKAGSS*RSNGKS Trigger: CGACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTT...CCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGCTCGAAGACAATCACTaGTGTGGACACTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTPPHPARTLDDPPAVRVLEDNH*CGHCVC Trigger: ACACACACAGTGTCCACAGCAGTGATTGTCTTCGAG...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGACTGGCTCATCTAGCTaGTGTTCTTCCCACTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTPPHPARTLDDPPAVRVTGSSS*CSSHSK Trigger: CTTAGAGTGGGAAGAACAGCAGCTAGATGAGCCAGT...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCAGAGCAGCTTCCTCTTTaGCAAAGGCCCCGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLDDPPAVRVALGSSFWSEQLPL*QRPRVP Trigger: AGGAACTCGGGGCCTTTGCCAAAGAGGAAGCTGCTC...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | CCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTAATGACAGCAAAGGCTaGCAGCTCTTGCAGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPGHLMIPQQLGWPWVPVNDSKG*QLLQVK Trigger: TTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATT...AACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCACTCCTGATCCGACGGTaGAGACAGCTGGGCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLDDPPAVRVALGSSFWSLLIRR*RQLGFS Trigger: AGAAAAGCCCAGCTGTCTCCACCGTCGGATCAGGAG...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | CTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGCAATGAGAAGATaGTGTGGGTCTTGTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIPPGHLMIPQQLGWPWVPAMRR*CGSCAK Trigger: CTTTGCACAAGACCCACACCATCTTCTCATTGCTGG...AACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCAGAAACTGGCGAGGGGTaGCCTGACTTTAACACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLDDPPAVRVALGSSFWSETGEG*PDFNTL Trigger: CAGGGTGTTAAAGTCAGGCCACCCCTCGCCAGTTTC...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| 3UTR CAA 72 bp | AGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTaGGGTTCCAGTTTCTGGTCACTGCTGCTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTLDDPPAVRVA*GSSFWSLLLAE Trigger: TTCTGCAAGCAGCAGTGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| 3UTR CAA 72 bp | AAGAGGCTTCTGAGGGCAATGCCTGCTGACTCCATGTaGCCTGTGGTACCTTCCTGCAGGCTTGTACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRLLRAMPADSM*PVVPSCRLVLL Trigger: CAACAGTACAAGCCTGCAGGAAGGTACCACAGGCAACATGGAGTCAGCAGGCATTGCCCTCAGAAGCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR TCA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCAGTGCTGCTATCTGTGTaGATCCCATCTGGGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLDDPPAVRVALGSSFWSVLLSV*IPSGNQ Trigger: CTGGTTCCCAGATGGGATTCACACAGATAGCAGCAC...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | TCGATGGATCCCAGTAGGATCATGGACTCAGGAGACTCCACTAGGGCCAACATAGAAGGGCGGCACACATaGTGGCAATGTGCACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMDPSRIMDSGDSTRANIEGRHT*WQCAQR Trigger: CCTTTGTGCACATTGCCAGCATGTGTGCCGCCCTTC...TATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGATCCTACTGGGATCCATCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGGCTCCTAGTAGTGCTACCACCTGTGAGCGTTCGATGGATCCCAGTAGGAATCACGGTTCCACACTaGCAAGACCCGAAAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGLLVVLPPVSVRWIPVGITVPH*QDPKDE Trigger: TTCATCTTTCGGGTCTTGGCAGTGTGGAACCGTGAT...TCCTACTGGGATCCATCGAACGCTCACAGGTGGTAGCACTACTAGGAGCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR GCA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGATAGTGGTAGCCAGTaGAGACATCCAGAACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTPPHPARTLDDPPAVRVDSGSQ*RHPELH Trigger: ATGAAGTTCTGGATGTCTGCACTGGCTACCACTATC...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR GCA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCAGCTTTTCTTAGCTTTTaGATGTGCTGCCGCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLDDPPAVRVALGSSFWSAFLSF*MCCRLR Trigger: GCGCAGGCGGCAGCACATGCAAAAGCTAAGAAAAGC...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CCA 90 bp | AATCATGACAGGCAGAATGTGAGCGATCTGGCCCGTGAGCTCGAAGACAATCACGAGCAGCTTCCTCTTTaGCAAAGGCCCCGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NHDRQNVSDLARELEDNHEQLPL*QRPRVP Trigger: AGGAACTCGGGGCCTTTGCCAAAGAGGAAGCTGCTC...GTGATTGTCTTCGAGCTCACGGGCCAGATCGCTCACATTCTGCCTGTCATGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR CCA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCATGTGGGGCCAGGATCTaGGTGAATCCAGCAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLDDPPAVRVALGSSFWSCGARI*VNPAEK Trigger: TTTCTCTGCTGGATTCACCCAGATCCTGGCCCCACA...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| 3UTR CAA 72 bp | GAGTCACTCGCCAGGGAGATTCGGACCCGCTTCAGCTaGCGCTTGTCACAGGATTCTGACTTTTCCAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESLAREIRTRFS*RLSQDSDFSNS Trigger: AGAATTGGAAAAGTCAGAATCCTGTGACAAGCGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR GCA 90 bp | GATGAAGATGACCAGAGTAAGGAAGACATTGGCACGTGGTGGGCTCCAGGCCTGATCACGGTTCCACACTaGCAAGACCCGAAAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: DEDDQSKEDIGTWWAPGLITVPH*QDPKDE Trigger: TTCATCTTTCGGGTCTTGGCAGTGTGGAACCGTGAT...CAGGCCTGGAGCCCACCACGTGCCAATGTCTTCCTTACTCTGGTCATCTTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231381.2 |
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| CDS-3UTR CCA 90 bp | ATCCCAGTAGGATCATGGACTCAGGAGACTCCACTAGGGCCAACATACGGCCCTAATGACAGCAAAGGCTaGCAGCTCTTGCAGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IPVGSWTQETPLGPTYGPNDSKG*QLLQVK Trigger: TTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATT...AGGGCCGTATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGATCCTACTGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR CCA 90 bp | AGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGAGACAATCACTGCTGTaGACACTGTGTGTGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLDDPPAVRVALGSSFWRQSLL*TLCVSL Trigger: CAGTGACACACACAGTGTCCACAGCAGTGATTGTCT...CCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR GCA 90 bp | TTAATCCCGGCATTTGGGAGTGACAGACAGGTGGATCTCTGTGTTCTTTCATGCCCATACATCAGGGTCTaGTCGTACTGCAGCGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LIPAFGSDRQVDLCVLSCPYIRV*SYCSAR Trigger: TCGAGCGCTGCAGTACGAGCAGACCCTGATGTATGG...GCATGAAAGAACACAGAGATCCACCTGTCTGTCACTCCCAAATGCCGGGATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR GCA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCAATCACGGTTCCACACTaGCAAGACCCGAAAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLDDPPAVRVALGSSFWSITVPH*QDPKDE Trigger: TTCATCTTTCGGGTCTTGGCAGTGTGGAACCGTGAT...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| 3UTR CAA 72 bp | CTCGCCAGGGAGATTCGGACCCGCTTCAGCTTGCGCTaGTCACAGGATTCTGACTTTTCCAATTCTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAREIRTRFSLR*SQDSDFSNSDV Trigger: AACATCAGAATTGGAAAAGTCAGAATCCTGTGACAAGCGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR CCA 90 bp | CTGAAGTTGACTGGCTCATCTAGCTGCTGTTCTTCCCACTCTAAGATCTCCTCATGCTTCCGCATCACCTaGACAATCTTCCGGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKLTGSSSCCSSHSKISSCFRIT*TIFRFR Trigger: CCTGAACCGGAAGATTGTCCAGGTGATGCGGAAGCA...TGAGGAGATCTTAGAGTGGGAAGAACAGCAGCTAGATGAGCCAGTCAACTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR GCA 90 bp | AATCATGACAGGCAGAATGTGAGCGATCTGGCCCGTGAGCTCGAAGACAATCACGATAGTGGTAGCCAGTaGAGACATCCAGAACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NHDRQNVSDLARELEDNHDSGSQ*RHPELH Trigger: ATGAAGTTCTGGATGTCTGCACTGGCTACCACTATC...GTGATTGTCTTCGAGCTCACGGGCCAGATCGCTCACATTCTGCCTGTCATGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR CCA 90 bp | ACTGGGATAGTGGTAGCCAGTGCAGACATCCAGAACTTCATGAGGATGAAGATGAATGACAGCAAAGGCTaGCAGCTCTTGCAGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGIVVASADIQNFMRMKMNDSKG*QLLQVK Trigger: TTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATT...CATCTTCATCCTCATGAAGTTCTGGATGTCTGCACTGGCTACCACTATCCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231381.2 |
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| CDS CCA 90 bp | GGAGGCCGTGGCGGGATCTTGGCCCCCAGAGCGCATGCACCTCAGTaGTCTCTGTGTCACTGCTGCTGGTGGCACTGTCCCGGAAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGRGGILAPRAHAPQ*SLCHCCWWHCPGNW Trigger: CCAGTTTCCGGGACAGTGCCACCAGCAGCAGTGACACAGAGACCACTGAGGTGCATGCGCTCTGGGGGCCAAGATCCCGCCACGGCCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
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| CDS CCA 90 bp | ACTGTCGGAGGGGGTACCCTCTCGTGGGAGGCCGTGGCGGGATCTTaGCCCCCAGAGCGCATGCACCTCAGTGGTCTCTGTGTCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVGGGTLSWEAVAGS*PPERMHLSGLCVTA Trigger: AGCAGTGACACAGAGACCACTGAGGTGCATGCGCTCTGGGGGCCAAGATCCCGCCACGGCCTCCCACGAGAGGGTACCCCCTCCGACAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
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| CDS-3UTR CAA 90 bp | CCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGCCGTGGCGGGATCTaGGCCCCCAGAGCGCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPHPARTLDDPPAVRVALGRGGI*APRAHA Trigger: TGCATGCGCTCTGGGGGCCAAGATCCCGCCACGGCC...CAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS CCA 90 bp | CACTTGTCATCACTGTCGGAGGGGGTACCCTCTCGTGGGAGGCCGTaGCGGGATCTTGGCCCCCAGAGCGCATGCACCTCAGTGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLSSLSEGVPSRGRP*RDLGPQSACTSVVS Trigger: AGAGACCACTGAGGTGCATGCGCTCTGGGGGCCAAGATCCCGCCACGGCCTCCCACGAGAGGGTACCCCCTCCGACAGTGATGACAAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
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| CDS GCA 90 bp | AGGTGCTGCTATCTGTGTGAATCCCATCTGGGAACCAGGCGGCCATaGTTTCGCCCACCAGCCGCCCAAATGCCGCTCCTTCAGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RCCYLCESHLGTRRP*FRPPAAQMPLLQGG Trigger: CCCTCCCTGAAGGAGCGGCATTTGGGCGGCTGGTGGGCGAAAGCATGGCCGCCTGGTTCCCAGATGGGATTCACACAGATAGCAGCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS GCA 90 bp | CGTGAGCTCGAAGACAATCACTGCTGTGGACACTGTGTGTGTCACTaGTCCTGCGAGTGCAGCCGCCCCGACCACAGCATAGCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RELEDNHCCGHCVCH*SCECSRPDHSIASR Trigger: CCTGGAGGCTATGCTGTGGTCGGGGCGGCTGCACTCGCAGGAGCAGTGACACACACAGTGTCCACAGCAGTGATTGTCTTCGAGCTCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
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| CDS CCA 90 bp | TCCAGGGCTCAGGCCCTCCCAGGCGAATACGAGCAGCTTCCTCTTTaGCAAAGGCCCCGAGTTCCTGAGTGTACCGGCCATACATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRAQALPGEYEQLPL*QRPRVPECTGHTSG Trigger: CCCTGATGTATGGCCGGTACACTCAGGAACTCGGGGCCTTTGCCAAAGAGGAAGCTGCTCGTATTCGCCTGGGAGGGCCTGAGCCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000232309.2 |
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| CDS-3UTR CAA 90 bp | TCTGTGCAGTGCCAACCGCAGGTCCCGAAAAGTGCAGCTGAGGGCTACATGGGGCGAGCAGCTTCCTCTTaGGCAAAGGCCCCGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVQCQPQVPKSAAEGYMGRAASS*AKAPSS Trigger: GGAACTCGGGGCCTTTGCCAAAGAGGAAGCTGCTCG...CCCCATGTAGCCCTCAGCTGCACTTTTCGGGACCTGCGGTTGGCACTGCACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS GCA 90 bp | CAGCCGCCCCGACCACAGCATAGCCTCCAGGTACAATTCGGTAGGTaGTGCTATCTGTGTGAATCCCATCTGGGAACCAGGCGGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: QPPRPQHSLQVQFGR*CYLCESHLGTRRPC Trigger: GCATGGCCGCCTGGTTCCCAGATGGGATTCACACAGATAGCAGCACCTACCGAATTGTACCTGGAGGCTATGCTGTGGTCGGGGCGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000131522.8 ENSMUST00000232309.2 |
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| CDS CCA 90 bp | CAGGCCTGTGAAGTGCTGGGTAGCTCTAGATCCTCAACCAGGCCCTaGCGGACCCACGTCCGGTTGTCAAACAGAGTGACTAGGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QACEVLGSSRSSTRP*RTHVRLSNRVTRVS Trigger: GGAGACCCTAGTCACTCTGTTTGACAACCGGACGTGGGTCCGCCAGGGCCTGGTTGAGGATCTAGAGCTACCCAGCACTTCACAGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000232309.2 |
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| CDS-3UTR CAA 90 bp | CCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTGCCAACATACGGCCCTaGGTTCTGTGCAGTGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PARTLDDPPAVRVALGSSANIRP*VLCSAN Trigger: GTTGGCACTGCACAGAACCAAGGGCCGTATGTTGGC...ACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS GCA 90 bp | AGGCAGAATGTGAGCGATCTGGCCCGTGAGCTCGAAGACAATCACTaGTGTGGACACTGTGTGTGTCACTGCTCCTGCGAGTGCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RQNVSDLARELEDNH*CGHCVCHCSCECSR Trigger: GCGGCTGCACTCGCAGGAGCAGTGACACACACAGTGTCCACAGCAGTGATTGTCTTCGAGCTCACGGGCCAGATCGCTCACATTCTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
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| CDS CCA 90 bp | TGTGTCACTGCTGCTGGTGGCACTGTCCCGGAAACTGGCGAGGGGTaGCCTGACTTTAACACCCTGTGCTGTGACAGAGCCTTCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: CVTAAGGTVPETGEG*PDFNTLCCDRAFNG Trigger: GCCATTGAAGGCTCTGTCACAGCACAGGGTGTTAAAGTCAGGCCACCCCTCGCCAGTTTCCGGGACAGTGCCACCAGCAGCAGTGACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
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| CDS-3UTR CAA 90 bp | CTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTACAAAGGGTCCCTCTTaGCCAAGGGGCATCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LIPPGHLMIPQQLGWPWVTKGPS*PRGIPL Trigger: CAGTGGGATGCCCCTTGGCAAAGAGGGACCCTTTGT...AACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR CAA 90 bp | CTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTAAGAGGGAGAGGAACTaGCTGAGAAGGGCGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LIPPGHLMIPQQLGWPWVKRERN*LRRAAH Trigger: GTGTGCCGCCCTTCTCAGCAAGTTCCTCTCCCTCTT...AACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR CAA 90 bp | ACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCAAAGGCTGGCAGCTCTaGCAGGTCAAATGGGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TPPHPARTLDDPPAVRVAKGWQL*QVKWEV Trigger: GACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTT...GGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR CAA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGCGGACCCACGTCCGGTaGTCAAACAGAGTGACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RTPPHPARTLDDPPAVRVRTHVR*SNRVTR Trigger: CCTAGTCACTCTGTTTGACAACCGGACGTGGGTCCG...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR CAA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGCCTGCTGACTCCATGTaGCCTGTGGTACCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RTPPHPARTLDDPPAVRVPADSM*PVVPSC Trigger: GCAGGAAGGTACCACAGGCAACATGGAGTCAGCAGG...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR CAA 90 bp | AGAACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGCGGACCCGCTTCAGCTaGCGCTTGTCACAGGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: RTPPHPARTLDDPPAVRVRTRFS*RLSQDS Trigger: AGAATCCTGTGACAAGCGCAAGCTGAAGCGGGTCCG...CACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS TCA 90 bp | AGGCGAATACGAGCAGCTTCCTCTTTGGCAAAGGCCCCGAGTTCCTaGGTGTACCGGCCATACATCAGGGTCTGCTCGTACTGCAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRIRAASSLAKAPSS*VYRPYIRVCSYCSA Trigger: AGCGCTGCAGTACGAGCAGACCCTGATGTATGGCCGGTACACTCAGGAACTCGGGGCCTTTGCCAAAGAGGAAGCTGCTCGTATTCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000232309.2 |
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| CDS GCA 90 bp | CCGCCCCGACCACAGCATAGCCTCCAGGTACAATTCGGTAGGTGCTaGTATCTGTGTGAATCCCATCTGGGAACCAGGCGGCCATGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PPRPQHSLQVQFGRC*YLCESHLGTRRPCF Trigger: AAAGCATGGCCGCCTGGTTCCCAGATGGGATTCACACAGATAGCAGCACCTACCGAATTGTACCTGGAGGCTATGCTGTGGTCGGGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000131522.8 ENSMUST00000232309.2 |
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| CDS-3UTR CAA 90 bp | AGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGCGAGCAGCTTCCTCTTaGGCAAAGGCCCCGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RTLDDPPAVRVALGSSFWRAASS*AKAPSS Trigger: GGAACTCGGGGCCTTTGCCAAAGAGGAAGCTGCTCG...CCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR CAA 90 bp | CCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTCTGGACACCAGGAACTaGTGGCAGCGTACAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: PARTLDDPPAVRVALGSSLDTRN*WQRTEQ Trigger: TTGTTCTGTACGCTGCCACAAGTTCCTGGTGTCCAG...ACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR CAA 90 bp | GCTGGGCTCCTAGTAGTGCTACCACCTGTGAGCGTTCGATGGATCCCAGTAGGACGGACCCACGTCCGGTaGTCAAACAGAGTGACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGLLVVLPPVSVRWIPVGRTHVR*SNRVTR Trigger: CCTAGTCACTCTGTTTGACAACCGGACGTGGGTCCG...TCCTACTGGGATCCATCGAACGCTCACAGGTGGTAGCACTACTAGGAGCCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR CAA 90 bp | ACCCCACCTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCCGCTTCAGCTTGCGCTaGTCACAGGATTCTGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPPHPARTLDDPPAVRVARFSLR*SQDSDF Trigger: AAAGTCAGAATCCTGTGACAAGCGCAAGCTGAAGCG...GGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAGGTGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR CAA 90 bp | CATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCTACTGGAGTAAGATGTaGGTGTTTAAGCCCCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HPARTLDDPPAVRVALGSYWSKM*VFKPRD Trigger: GTCCCGGGGCTTAAACACCAACATCTTACTCCAGTA...GGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR CAA 90 bp | TCATGGACTCAGGAGACTCCACTAGGGCCAACATACGGCCCTTGGTTCTGTGCAACAAAGGGTCCCTCTTaGCCAAGGGGCATCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SWTQETPLGPTYGPWFCATKGPS*PRGIPL Trigger: CAGTGGGATGCCCCTTGGCAAAGAGGGACCCTTTGT...TGCACAGAACCAAGGGCCGTATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR CAA 90 bp | GCTGGGCTCCTAGTAGTGCTACCACCTGTGAGCGTTCGATGGATCCCAGTAGGAAAAGGCTGGCAGCTCTaGCAGGTCAAATGGGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGLLVVLPPVSVRWIPVGKGWQL*QVKWEV Trigger: GACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTT...TCCTACTGGGATCCATCGAACGCTCACAGGTGGTAGCACTACTAGGAGCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR CAA 90 bp | GCTTTCGCCCACCAGCCGCCCAAATGCCGCTCCAATGACAAAGACAGGCATGAAAAAGGCTGGCAGCTCTaGCAGGTCAAATGGGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AFAHQPPKCRSNDKDRHEKGWQL*QVKWEV Trigger: GACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTT...TTCATGCCTGTCTTTGTCATTGGAGCGGCATTTGGGCGGCTGGTGGGCGAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231381.2 |
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| CDS-3UTR CAA 90 bp | AGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGAGAGTAAGGAAGACATaGGCACGTGGTGGGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTLDDPPAVRVALGSSFWRVRKT*ARGGLQ Trigger: CTGGAGCCCACCACGTGCCAATGTCTTCCTTACTCT...CCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS-3UTR CAA 90 bp | ATCCCAGTAGGATCATGGACTCAGGAGACTCCACTAGGGCCAACATACGGCCCTAGAGTAAGGAAGACATaGGCACGTGGTGGGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IPVGSWTQETPLGPTYGPRVRKT*ARGGLQ Trigger: CTGGAGCCCACCACGTGCCAATGTCTTCCTTACTCT...AGGGCCGTATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGATCCTACTGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR CAA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCATACCTTCCTGCAGGCTaGTACTGTTGCTGGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLDDPPAVRVALGSSFWSYLPAG*YCCWAL Trigger: GAGGGCCCAGCAACAGTACAAGCCTGCAGGAAGGTA...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
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| CDS GCA 90 bp | CACCGACCCTGGACACCAGGAACTTGTGGCAGCGTACAGAACAAATaGGACATCTGGCACATCGGCTCTGTCCATATTCTAGGAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HRPWTPGTCGSVQNK*DIWHIGSVHILGAL Trigger: CAGAGCTCCTAGAATATGGACAGAGCCGATGTGCCAGATGTCGCATTTGTTCTGTACGCTGCCACAAGTTCCTGGTGTCCAGGGTCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 |
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| CDS CCA 90 bp | ACCAGGAAGATCCAGTCTTCACCGACCCTGGACACCAGGAACTTGTaGCAGCGTACAGAACAAATGCGACATCTGGCACATCGGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TRKIQSSPTLDTRNL*QRTEQMRHLAHRLC Trigger: ACAGAGCCGATGTGCCAGATGTCGCATTTGTTCTGTACGCTGCCACAAGTTCCTGGTGTCCAGGGTCGGTGAAGACTGGATCTTCCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 |
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| CDS-3UTR CAA 90 bp | CGAAAAGTGCAGCTGAGGGCTACATGGGGTACATCCCGAACCATGATGTCCTCGCTGGACACCAGGAACTaGTGGCAGCGTACAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: RKVQLRATWGTSRTMMSSLDTRN*WQRTEQ Trigger: TTGTTCTGTACGCTGCCACAAGTTCCTGGTGTCCAG...CGAGGACATCATGGTTCGGGATGTACCCCATGTAGCCCTCAGCTGCACTTTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
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| CDS-3UTR CAA 90 bp | AGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGGGGGCAGGGTCGATTTaGCAGTCACTGAAGTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: RTLDDPPAVRVALGSSFWGAGSI*QSLKLT Trigger: AGTCAACTTCAGTGACTGCAAAATCGACCCTGCCCC...CCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CAA 90 bp | ACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTCAGCGGTTGATGGTTTTTaGCTTCCGCATCACCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TLDDPPAVRVALGSSFWSAVDGF*LPHHLD Trigger: GTCCAGGTGATGCGGAAGCAAAAAACCATCAACCGC...TGACCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CAA 90 bp | AGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTCCAGTTTCTGGTTTCCAATTCTGATGTaGCCTCCAGAGGTGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RTLDDPPAVRVALGSSFWFPILM*PPEVDC Trigger: GCAGTCCACCTCTGGAGGCAACATCAGAATTGGAAA...CCAGAAACTGGAACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS GCA 90 bp | CCGAAGCCACTAGCAATGCCAATGACAGCAAAGGCTGGCAGCTCTTaGAGGTCAAATGGGAAGTCGAGTCGGAACCGAGTTTTGAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PKPLAMPMTAKAGSS*RSNGKSSRNRVLKR Trigger: TCTCTTCAAAACTCGGTTCCGACTCGACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATTGGCATTGCTAGTGGCTTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000231381.2 ENSMUST00000232309.2 |
||
| CDS GCA 90 bp | GGAGTAAGATGTTGGTGTTTAAGCCCCGGGACATCCATTGCTGAGTaGGACATCTGGCACATCGGCTCTGTCCATATTCTAGGAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVRCWCLSPGTSIAE*DIWHIGSVHILGAL Trigger: CAGAGCTCCTAGAATATGGACAGAGCCGATGTGCCAGATGTCGCACTCAGCAATGGATGTCCCGGGGCTTAAACACCAACATCTTACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232309.2 |
||
| CDS-3UTR CAA 90 bp | CTCATCCCGCCAGGACACTTGATGATCCCCCAGCAGTTAGGGTGGCCTTGGGTTTTAGCTACAAAGGTCTaGAGGGTGAGGTATTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LIPPGHLMIPQQLGWPWVLATKV*RVRYSF Trigger: GAAAGAATACCTCACCCTCAAGACCTTTGTAGCTAA...AACCCAAGGCCACCCTAACTGCTGGGGGATCATCAAGTGTCCTGGCGGGATGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007207.15 |
||
| CDS-3UTR CAA 90 bp | CTGAAGTTGACTGGCTCATCTAGCTGCTGTTCTTCCCACTCTAAGATCTCCTCAAAGAGGGAGAGGAACTaGCTGAGAAGGGCGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LKLTGSSSCCSSHSKISSKRERN*LRRAAH Trigger: GTGTGCCGCCCTTCTCAGCAAGTTCCTCTCCCTCTT...TGAGGAGATCTTAGAGTGGGAAGAACAGCAGCTAGATGAGCCAGTCAACTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS-3UTR CAA 90 bp | TCGATGGATCCCAGTAGGATCATGGACTCAGGAGACTCCACTAGGGCCAACATAGCGGTTGATGGTTTTTaGCTTCCGCATCACCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SMDPSRIMDSGDSTRANIAVDGF*LPHHLD Trigger: GTCCAGGTGATGCGGAAGCAAAAAACCATCAACCGC...TATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGATCCTACTGGGATCCATCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS TCA 90 bp | TACTGGAGTAAGATGTTGGTGTTTAAGCCCCGGGACATCCATTGCTaGGTGCGACATCTGGCACATCGGCTCTGTCCATATTCTAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YWSKMLVFKPRDIHC*VRHLAHRLCPYSRS Trigger: GCTCCTAGAATATGGACAGAGCCGATGTGCCAGATGTCGCACTCAGCAATGGATGTCCCGGGGCTTAAACACCAACATCTTACTCCAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232309.2 |
||
| CDS CCA 90 bp | AGCAATGCCAATGACAGCAAAGGCTGGCAGCTCTTGCAGGTCAAATaGGAAGTCGAGTCGGAACCGAGTTTTGAAGAGAGCTGTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SNANDSKGWQLLQVK*EVESEPSFEESCDG Trigger: ACCATCACAGCTCTCTTCAAAACTCGGTTCCGACTCGACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATTGGCATTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000231381.2 ENSMUST00000232309.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAGTTGACTGGCTCATCTAGCTGCTGTTCTTCCCACTCTAAGATCTCCTCATTAGCTACAAAGGTCTaGAGGGTGAGGTATTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKLTGSSSCCSSHSKISSLATKV*RVRYSF Trigger: GAAAGAATACCTCACCCTCAAGACCTTTGTAGCTAA...TGAGGAGATCTTAGAGTGGGAAGAACAGCAGCTAGATGAGCCAGTCAACTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS CCA 72 bp | GGGGGTACCCTCTCGTGGGAGGCCGTGGCGGGATCTTaGCCCCCAGAGCGCATGCACCTCAGTGGTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GGTLSWEAVAGS*PPERMHLSGLC Trigger: ACAGAGACCACTGAGGTGCATGCGCTCTGGGGGCCAAGATCCCGCCACGGCCTCCCACGAGAGGGTACCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
||
| CDS CCA 72 bp | TCACTGTCGGAGGGGGTACCCTCTCGTGGGAGGCCGTaGCGGGATCTTGGCCCCCAGAGCGCATGCACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLSEGVPSRGRP*RDLGPQSACTS Trigger: TGAGGTGCATGCGCTCTGGGGGCCAAGATCCCGCCACGGCCTCCCACGAGAGGGTACCCCCTCCGACAGTGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
||
| CDS CAA 72 bp | AGGGGGTACCCTCTCGTGGGAGGCCGTGGCGGGATCTaGGCCCCCAGAGCGCATGCACCTCAGTGGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGYPLVGGRGGI*APRAHAPQWSL Trigger: CAGAGACCACTGAGGTGCATGCGCTCTGGGGGCCAAGATCCCGCCACGGCCTCCCACGAGAGGGTACCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
||
| CDS CAA 90 bp | CACTGTCGGAGGGGGTACCCTCTCGTGGGAGGCCGTGGCGGGATCTaGGCCCCCAGAGCGCATGCACCTCAGTGGTCTCTGTGTCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: HCRRGYPLVGGRGGI*APRAHAPQWSLCHC Trigger: GCAGTGACACAGAGACCACTGAGGTGCATGCGCTCTGGGGGCCAAGATCCCGCCACGGCCTCCCACGAGAGGGTACCCCCTCCGACAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
||
| CDS CCA 72 bp | GCGCATGCACCTCAGTGGTCTCTGTGTCACTGCTGCTaGTGGCACTGTCCCGGAAACTGGCGAGGGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AHAPQWSLCHCC*WHCPGNWRGVA Trigger: GGCCACCCCTCGCCAGTTTCCGGGACAGTGCCACCAGCAGCAGTGACACAGAGACCACTGAGGTGCATGCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
||
| CDS CCA 72 bp | GGCGGGATCTTGGCCCCCAGAGCGCATGCACCTCAGTaGTCTCTGTGTCACTGCTGCTGGTGGCACTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGILAPRAHAPQ*SLCHCCWWHCP Trigger: GGGACAGTGCCACCAGCAGCAGTGACACAGAGACCACTGAGGTGCATGCGCTCTGGGGGCCAAGATCCCGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
||
| CDS GCA 72 bp | CCCAGAGCGCATGCACCTCAGTGGTCTCTGTGTCACTaGTGCTGGTGGCACTGTCCCGGAAACTGGCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRAHAPQWSLCH*CWWHCPGNWRG Trigger: CCCTCGCCAGTTTCCGGGACAGTGCCACCAGCAGCAGTGACACAGAGACCACTGAGGTGCATGCGCTCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
||
| CDS TCA 72 bp | GGCCCTGGCGGACCCACGTCCGGTTGTCAAACAGAGTaGCTAGGGTCTCCTTCTGTGAGAGCTGTCCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPGGPTSGCQTE*LGSPSVRAVRP Trigger: TGGCCGGACAGCTCTCACAGAAGGAGACCCTAGTCACTCTGTTTGACAACCGGACGTGGGTCCGCCAGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000232309.2 |
||
| CDS GCA 72 bp | AGAGCGCATGCACCTCAGTGGTCTCTGTGTCACTGCTaGTGGTGGCACTGTCCCGGAAACTGGCGAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RAHAPQWSLCHC*WWHCPGNWRGV Trigger: CACCCCTCGCCAGTTTCCGGGACAGTGCCACCAGCAGCAGTGACACAGAGACCACTGAGGTGCATGCGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
||
| CDS CCA 72 bp | GCTGCTGGTGGCACTGTCCCGGAAACTGGCGAGGGGTaGCCTGACTTTAACACCCTGTGCTGTGACAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAGGTVPETGEG*PDFNTLCCDRA Trigger: GGCTCTGTCACAGCACAGGGTGTTAAAGTCAGGCCACCCCTCGCCAGTTTCCGGGACAGTGCCACCAGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
||
| CDS GCA 72 bp | AATCACTGCTGTGGACACTGTGTGTGTCACTGCTCCTaGGAGTGCAGCCGCCCCGACCACAGCATAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NHCCGHCVCHCS*ECSRPDHSIAS Trigger: GGAGGCTATGCTGTGGTCGGGGCGGCTGCACTCGCAGGAGCAGTGACACACACAGTGTCCACAGCAGTGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
||
| CDS GCA 72 bp | CCAGGCGGCCATGCTTTCGCCCACCAGCCGCCCAAATaGCGCTCCTTCAGGGAGGGTTTTAGGAAGAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PGGHAFAHQPPK*RSFREGFRKRK Trigger: CTTTCTCTTCCTAAAACCCTCCCTGAAGGAGCGGCATTTGGGCGGCTGGTGGGCGAAAGCATGGCCGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS CCA 72 bp | CAGGCCCTCCCAGGCGAATACGAGCAGCTTCCTCTTTaGCAAAGGCCCCGAGTTCCTGAGTGTACCGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QALPGEYEQLPL*QRPRVPECTGH Trigger: ATGGCCGGTACACTCAGGAACTCGGGGCCTTTGCCAAAGAGGAAGCTGCTCGTATTCGCCTGGGAGGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000232309.2 |
||
| CDS CCA 72 bp | GGGATGCCAGACCCGACAGCCTGTGGGGCCAGGATCTaGGTGAATCCAGCAGAGAAAGTGATGAGGACCACG | + |
|
Preference number: 6 (lower is better) Translates to: GMPDPTACGARI*VNPAEKVMRTT Trigger: CGTGGTCCTCATCACTTTCTCTGCTGGATTCACCCAGATCCTGGCCCCACAGGCTGTCGGGTCTGGCATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000232309.2 |
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| CDS GCA 72 bp | TATCTGTGTGAATCCCATCTGGGAACCAGGCGGCCATaGTTTCGCCCACCAGCCGCCCAAATGCCGCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: YLCESHLGTRRP*FRPPAAQMPLL Trigger: AAGGAGCGGCATTTGGGCGGCTGGTGGGCGAAAGCATGGCCGCCTGGTTCCCAGATGGGATTCACACAGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131522.8 |
||
| CDS CAA 90 bp | GGTAGCTCTAGATCCTCAACCAGGCCCTGGCGGACCCACGTCCGGTaGTCAAACAGAGTGACTAGGGTCTCCTTCTGTGAGAGCTGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSSRSSTRPWRTHVR*SNRVTRVSFCESCP Trigger: CGGACAGCTCTCACAGAAGGAGACCCTAGTCACTCTGTTTGACAACCGGACGTGGGTCCGCCAGGGCCTGGTTGAGGATCTAGAGCTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000232309.2 |
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| CDS TCA 72 bp | CGAGCAGCTTCCTCTTTGGCAAAGGCCCCGAGTTCCTaGGTGTACCGGCCATACATCAGGGTCTGCTCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: RAASSLAKAPSS*VYRPYIRVCSY Trigger: GTACGAGCAGACCCTGATGTATGGCCGGTACACTCAGGAACTCGGGGCCTTTGCCAAAGAGGAAGCTGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000232309.2 |
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| CDS GCA 72 bp | CACACATGCTGGCAATGTGCACAAAGGGTCCCTCTTTaGCAAGGGGCATCCCACTGCCCAGGGCACAGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: HTCWQCAQRVPL*QGASHCPGHRL Trigger: TAACCTGTGCCCTGGGCAGTGGGATGCCCCTTGGCAAAGAGGGACCCTTTGTGCACATTGCCAGCATGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000232309.2 |
||
| CDS GCA 72 bp | GTGAGCGATCTGGCCCGTGAGCTCGAAGACAATCACTaGTGTGGACACTGTGTGTGTCACTGCTCCTGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: VSDLARELEDNH*CGHCVCHCSCE Trigger: CTCGCAGGAGCAGTGACACACACAGTGTCCACAGCAGTGATTGTCTTCGAGCTCACGGGCCAGATCGCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
||
| CDS GCA 72 bp | GAAACTGGCGAGGGGTGGCCTGACTTTAACACCCTGTaGTGTGACAGAGCCTTCAATGGCCTTCCGGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ETGEGWPDFNTL*CDRAFNGLPEL Trigger: GAGCTCCGGAAGGCCATTGAAGGCTCTGTCACAGCACAGGGTGTTAAAGTCAGGCCACCCCTCGCCAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000232309.2 |
||
| CDS CCA 72 bp | GAAGTGCTGGGTAGCTCTAGATCCTCAACCAGGCCCTaGCGGACCCACGTCCGGTTGTCAAACAGAGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: EVLGSSRSSTRP*RTHVRLSNRVT Trigger: AGTCACTCTGTTTGACAACCGGACGTGGGTCCGCCAGGGCCTGGTTGAGGATCTAGAGCTACCCAGCACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000232309.2 |
||
| CDS CAA 72 bp | AGATCCTCAACCAGGCCCTGGCGGACCCACGTCCGGTaGTCAAACAGAGTGACTAGGGTCTCCTTCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSSTRPWRTHVR*SNRVTRVSFCE Trigger: CTCACAGAAGGAGACCCTAGTCACTCTGTTTGACAACCGGACGTGGGTCCGCCAGGGCCTGGTTGAGGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000232309.2 |
||
| CDS GCA 72 bp | CCACAGCATAGCCTCCAGGTACAATTCGGTAGGTGCTaGTATCTGTGTGAATCCCATCTGGGAACCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PQHSLQVQFGRC*YLCESHLGTRR Trigger: CCGCCTGGTTCCCAGATGGGATTCACACAGATAGCAGCACCTACCGAATTGTACCTGGAGGCTATGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000131522.8 ENSMUST00000232309.2 |
||
| CDS CCA 72 bp | CCCGAAGCCACTAGCAATGCCAATGACAGCAAAGGCTaGCAGCTCTTGCAGGTCAAATGGGAAGTCGAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PEATSNANDSKG*QLLQVKWEVES Trigger: CGACTCGACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATTGGCATTGCTAGTGGCTTCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000231381.2 ENSMUST00000232309.2 |
||
| CDS CAA 90 bp | AGAACCAGGAAGATCCAGTCTTCACCGACCCTGGACACCAGGAACTaGTGGCAGCGTACAGAACAAATGCGACATCTGGCACATCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RTRKIQSSPTLDTRN*WQRTEQMRHLAHRL Trigger: GAGCCGATGTGCCAGATGTCGCATTTGTTCTGTACGCTGCCACAAGTTCCTGGTGTCCAGGGTCGGTGAAGACTGGATCTTCCTGGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 |
||
| CDS CCA 72 bp | TTAAGCCCCGGGACATCCATTGCTGAGTGCGACATCTaGCACATCGGCTCTGTCCATATTCTAGGAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSPGTSIAECDI*HIGSVHILGAL Trigger: CAGAGCTCCTAGAATATGGACAGAGCCGATGTGCCAGATGTCGCACTCAGCAATGGATGTCCCGGGGCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232309.2 |
||
| CDS CAA 90 bp | CCCGAAGCCACTAGCAATGCCAATGACAGCAAAGGCTGGCAGCTCTaGCAGGTCAAATGGGAAGTCGAGTCGGAACCGAGTTTTGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PEATSNANDSKGWQL*QVKWEVESEPSFEE Trigger: CTCTTCAAAACTCGGTTCCGACTCGACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATTGGCATTGCTAGTGGCTTCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000231381.2 ENSMUST00000232309.2 |
||
| CDS GCA 72 bp | GAGAGCTGTGATGGTTTCTTCATCACGGTTCCACACTaGCAAGACCCGAAAGATGAAGGCACTGAAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ESCDGFFITVPH*QDPKDEGTEGG Trigger: GCCACCTTCAGTGCCTTCATCTTTCGGGTCTTGGCAGTGTGGAACCGTGATGAAGAAACCATCACAGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000231381.2 ENSMUST00000232309.2 |
||
| CDS CCA 72 bp | ATCCAGTCTTCACCGACCCTGGACACCAGGAACTTGTaGCAGCGTACAGAACAAATGCGACATCTGGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: IQSSPTLDTRNL*QRTEQMRHLAH Trigger: ATGTGCCAGATGTCGCATTTGTTCTGTACGCTGCCACAAGTTCCTGGTGTCCAGGGTCGGTGAAGACTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 |
||
| CDS CCA 72 bp | CCAACAGAACCAGGAAGATCCAGTCTTCACCGACCCTaGACACCAGGAACTTGTGGCAGCGTACAGAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: PTEPGRSSLHRP*TPGTCGSVQNK Trigger: TTTGTTCTGTACGCTGCCACAAGTTCCTGGTGTCCAGGGTCGGTGAAGACTGGATCTTCCTGGTTCTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 |
||
| CDS CAA 90 bp | GGCAGCTCTTGCAGGTCAAATGGGAAGTCGAGTCGGAACCGAGTTTaGAAGAGAGCTGTGATGGTTTCTTCATCACGGTTCCACACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSSCRSNGKSSRNRV*KRAVMVSSSRFHTA Trigger: GGCAGTGTGGAACCGTGATGAAGAAACCATCACAGCTCTCTTCAAAACTCGGTTCCGACTCGACTTCCCATTTGACCTGCAAGAGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000231381.2 ENSMUST00000232309.2 |
||
| CDS TCA 72 bp | AAGATGTTGGTGTTTAAGCCCCGGGACATCCATTGCTaGGTGCGACATCTGGCACATCGGCTCTGTCCATAT | + |
|
Preference number: 6 (lower is better) Translates to: KMLVFKPRDIHC*VRHLAHRLCPY Trigger: ATATGGACAGAGCCGATGTGCCAGATGTCGCACTCAGCAATGGATGTCCCGGGGCTTAAACACCAACATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232309.2 |
||
| CDS CCA 72 bp | GGAACTTGTGGCAGCGTACAGAACAAATGCGACATCTaGCACATCGGCTCTGTCCATATTCTAGGAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GTCGSVQNKCDI*HIGSVHILGAL Trigger: CAGAGCTCCTAGAATATGGACAGAGCCGATGTGCCAGATGTCGCATTTGTTCTGTACGCTGCCACAAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 |
||
| CDS CCA 72 bp | AATGACAGCAAAGGCTGGCAGCTCTTGCAGGTCAAATaGGAAGTCGAGTCGGAACCGAGTTTTGAAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NDSKGWQLLQVK*EVESEPSFEES Trigger: GCTCTCTTCAAAACTCGGTTCCGACTCGACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000231381.2 ENSMUST00000232309.2 |
||
| CDS GCA 72 bp | TGGACACCAGGAACTTGTGGCAGCGTACAGAACAAATaGGACATCTGGCACATCGGCTCTGTCCATATTCTA | + |
|
Preference number: 6 (lower is better) Translates to: WTPGTCGSVQNK*DIWHIGSVHIL Trigger: TAGAATATGGACAGAGCCGATGTGCCAGATGTCGCATTTGTTCTGTACGCTGCCACAAGTTCCTGGTGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 |
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| CDS CAA 72 bp | TGCAGGTCAAATGGGAAGTCGAGTCGGAACCGAGTTTaGAAGAGAGCTGTGATGGTTTCTTCATCACGGTTC | + |
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Preference number: 6 (lower is better) Translates to: CRSNGKSSRNRV*KRAVMVSSSRF Trigger: GAACCGTGATGAAGAAACCATCACAGCTCTCTTCAAAACTCGGTTCCGACTCGACTTCCCATTTGACCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007207.15 ENSMUST00000120099.8 ENSMUST00000131522.8 ENSMUST00000231381.2 ENSMUST00000232309.2 |
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