Pregenerated sensors for CLCC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027884Ensembl transcript IDs: ENSMUST00000029483.15, ENSMUST00000106609.8, ENSMUST00000106613.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCAGGTTGCTTTGCTAGCTGTCAAGGTAGATTCCATCCCCAAATaGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCATTG | + |
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Preference number: 1 (lower is better) Translates to: QQVALLAVKVDSIPK*AFQRWLELWLLCAL Trigger: CAATGCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAATCTACCTTGACAGCTAGCAAAGCAACCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| 3UTR GCA 90 bp | ATAAAAACACAGGTGCCTGACTCTGTGGCAGCAGCAGACCCAGCCTaGATTAAATACCCTGTTAGTAAACTAGGTTTCAGAGGACTTCTG | + |
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Preference number: 1 (lower is better) Translates to: IKTQVPDSVAAADPA*IKYPVSKLGFRGLL Trigger: CAGAAGTCCTCTGAAACCTAGTTTACTAACAGGGTATTTAATGCAGGCTGGGTCTGCTGCTGCCACAGAGTCAGGCACCTGTGTTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| 3UTR GCA 90 bp | ATCAAGTCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTaGTTTGCTAGCTGTCAAGGTAGATTCCATCCCCAAATGGGCATT | + |
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Preference number: 1 (lower is better) Translates to: IKSSLNCCSHSRTAG*FASCQGRFHPQMGI Trigger: AATGCCCATTTGGGGATGGAATCTACCTTGACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGACTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| 3UTR GCA 90 bp | CTGGCCTTGATATCGTCACCTGTGTTAATCAAGTCTTCCCTGAATTaGTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: LALISSPVLIKSSLN*CSHSRTAGCFASCQ Trigger: TTGACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGACTTGATTAACACAGGTGACGATATCAAGGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| 3UTR-3UTR TCA 90 bp | CCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAACCAGACCATCCAAAAAACACAGGTGCCTaGCTCTGTGGCAGCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: PQSLTKCETQVSLEPDHPKNTGA*LCGSSR Trigger: TCTGCTGCTGCCACAGAGTCAGGCACCTGTGTTTTT...TGGATGGTCTGGTTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTTGGGCATTTCAAAGATaGCTGGAGCTGTGGTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: SSLNCCSHSRTAGCFASCWAFQR*LELWLL Trigger: GAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCA...ACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| 3UTR-3UTR CCA 90 bp | CCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAACCAGACCATCCATACAGACTTCAAAGATaGCTGGAGCTGTGGTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: PQSLTKCETQVSLEPDHPYRLQR*LELWLL Trigger: GAGCAACCACAGCTCCAGCCATCTTTGAAGTCTGTA...TGGATGGTCTGGTTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| 3UTR-3UTR TCA 90 bp | AATAAAATGTGCAGTGTAGATATGGTTGCAACAACAAAGGACACCTGCGTGCACTCAGCCAACACACTTTaGTCAGTTGGCTCCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: NKMCSVDMVATTKDTCVHSANTL*SVGSCF Trigger: AAAGCAGGAGCCAACTGATCAAAGTGTGTTGGCTGA...GTGCACGCAGGTGTCCTTTGTTGTTGCAACCATATCTACACTGCACATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTTAACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTGTCACACTAATCACTTaGGACAAGCCGCTTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: ALTTTYPVLFLKASYNVLVTLIT*DKPLLF Trigger: AAAGAGAAGCGGCTTGTCTCAAGTGATTAGTGTGAC...AAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTTAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| 3UTR-3UTR TCA 90 bp | AATAAAATGTGCAGTGTAGATATGGTTGCAACAACAAAGGACACCTGCGTGCACATTTGTAAGGAAGGATaGAGAGTCAATACAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: NKMCSVDMVATTKDTCVHICKEG*RVNTDF Trigger: GAAGTCTGTATTGACTCTTCATCCTTCCTTACAAAT...GTGCACGCAGGTGTCCTTTGTTGTTGCAACCATATCTACACTGCACATTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| 3UTR-3UTR GCA 90 bp | AACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTTAACCGCCGCTTCTCTTTTCTaGAATAAACTGGCCTTGATA | + |
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Preference number: 2 (lower is better) Translates to: NNYLPCSFLKSQLQCALTAASLF*NKLALI Trigger: TATCAAGGCCAGTTTATTGCAGAAAAGAGAAGCGGC...GGTTAAAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTAACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTAAGTCTTCCCTGAATTaGTGTAGTCACTCAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: ALTTTYPVLFLKASYNVLKSSLN*CSHSRT Trigger: TGTTCTTGAGTGACTACAGCAATTCAGGGAAGACTT...AAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTTAAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| 3UTR CCA 72 bp | GCTTTGCTAGCTGTCAAGGTAGATTCCATCCCCAAATaGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: ALLAVKVDSIPK*AFQRWLELWLL Trigger: GAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAATCTACCTTGACAGCTAGCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| 3UTR TCA 72 bp | CTAGGTTTCAGAGGACTTCTGTCAGCCAACACACTTTaGTCAGTTGGCTCCTGCTTTGCTAGCTGTCATGTA | + |
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Preference number: 3 (lower is better) Translates to: LGFRGLLSANTL*SVGSCFASCHV Trigger: TACATGACAGCTAGCAAAGCAGGAGCCAACTGATCAAAGTGTGTTGGCTGACAGAAGTCCTCTGAAACCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| 3UTR TCA 72 bp | GAGAATAAAGCCATTCCCACAGTCACTGACAAAGTGTaGAACTCAAGTATCGCTAGAACCAGACCATCCAGG | + |
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Preference number: 3 (lower is better) Translates to: ENKAIPTVTDKV*NSSIARTRPSR Trigger: CCTGGATGGTCTGGTTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGGGAATGGCTTTATTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAAGCCATTCCCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAAGTCAGCCAACACACTTaGATCAGTTGGCTCCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: IKPFPQSLTKCETQVSLEVSQHT*ISWLLL Trigger: AAGCAGGAGCCAACTGATCAAAGTGTGTTGGCTGAC...TTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGGGAATGGCTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| 3UTR GCA 72 bp | ATATCGTCACCTGTGTTAATCAAGTCTTCCCTGAATTaGTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: ISSPVLIKSSLN*CSHSRTAGCFA Trigger: AGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGACTTGATTAACACAGGTGACGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| 3UTR TCA 72 bp | ACCAGAATTACATTTAGCCAAGACAGTATAGTAAACTaGATAGCATCAAAGCAACTGCACGATTCCAAACAT | + |
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Preference number: 3 (lower is better) Translates to: TRITFSQDSIVN*IASKQLHDSKH Trigger: ATGTTTGGAATCGTGCAGTTGCTTTGATGCTATTCAGTTTACTATACTGTCTTGGCTAAATGTAATTCTGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| CDS-3UTR CCA 90 bp | TTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCGGGTGGGCAGCCTCCTaGTGGGCTGCACTCGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: FHPQMGISKMAGAVVALCGWAAS*WAALGV Trigger: GACTCCGAGTGCAGCCCACCAGGAGGCTGCCCACCC...GCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR CCA 90 bp | AATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTCAAGGTAGAGGGTGGGCAGCCTCCTaGTGGGCTGCACTCGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: NCCSHSRTAGCFASCQGRGWAAS*WAALGV Trigger: GACTCCGAGTGCAGCCCACCAGGAGGCTGCCCACCC...TCTACCTTGACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR GCA 90 bp | CCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCATTGTTCCTGTGGGTGAGCTTTTaGCAGCGCTGGGAACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PKWAFQRWLELWLLCALFLWVSF*QRWELG Trigger: GCCAAGTTCCCAGCGCTGGCAAAAGCTCACCCACAG...GAACAATGCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR CCA 90 bp | TTTGTAAGGAAGGATGAAGAGTCAATACAGACTTCAAAGATGGCTGGAGCTGTGGGGTGGGCAGCCTCCTaGTGGGCTGCACTCGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: FVRKDEESIQTSKMAGAVGWAAS*WAALGV Trigger: GACTCCGAGTGCAGCCCACCAGGAGGCTGCCCACCC...CACAGCTCCAGCCATCTTTGAAGTCTGTATTGACTCTTCATCCTTCCTTACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| CDS-3UTR CCA 90 bp | TCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTCTGCAGCTTCCTTGCTaGGTGGGCAGCCTCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SSLNCCSHSRTAGCFASCLQLPC*VGSLLV Trigger: CACCAGGAGGCTGCCCACCCAGCAAGGAAGCTGCAG...ACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR CCA 90 bp | CCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAACCAGACCATCCACTGCAGCTTCCTTGCTaGGTGGGCAGCCTCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: PQSLTKCETQVSLEPDHPLQLPC*VGSLLV Trigger: CACCAGGAGGCTGCCCACCCAGCAAGGAAGCTGCAG...TGGATGGTCTGGTTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| CDS-3UTR TCA 90 bp | TCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTCTTGTCCACTGTGGGTaGGCTTTTGCCAGCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SSLNCCSHSRTAGCFASCLVHCG*AFASAG Trigger: CCCAGCGCTGGCAAAAGCTCACCCACAGTGGACAAG...ACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR GCA 90 bp | GGAAGGATGAAGAGTCAATACAGACTTCAAAGATGGCTGGAGCTGTGGTTGCTCCTGTGGGTGAGCTTTTaGCAGCGCTGGGAACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: GRMKSQYRLQRWLELWLLLWVSF*QRWELG Trigger: GCCAAGTTCCCAGCGCTGGCAAAAGCTCACCCACAG...GAGCAACCACAGCTCCAGCCATCTTTGAAGTCTGTATTGACTCTTCATCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| CDS-3UTR GCA 90 bp | CCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCATTGTTCTTCAGTCCCGTGTGCTaGCACTGCAGCTTCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: PKWAFQRWLELWLLCALFFSPVC*HCSFLA Trigger: AGCAAGGAAGCTGCAGTGGCAGCACACGGGACTGAA...GAACAATGCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR CCA 90 bp | TTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCGCTGGGGACCACTTCTaGATGTTCTTGTGCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: FHPQMGISKMAGAVVALCAGDHF*MFLCLC Trigger: ACAGAGGCACAAGAACATCCAGAAGTGGTCCCCAGC...GCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR CCA 90 bp | CCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCATTGTTCCGGGGTGCTTTCTCCTaGGAGTTCACCAGTCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: PKWAFQRWLELWLLCALFRGAFS*EFTSLK Trigger: CTTGAGACTGGTGAACTCCCAGGAGAAAGCACCCCG...GAACAATGCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR CCA 90 bp | TTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCGGCCAGAGACATCCTTaGCAGACTGGCTGTATTCTG | + |
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Preference number: 4 (lower is better) Translates to: FHPQMGISKMAGAVVALCGQRHP*QTGCIL Trigger: CAGAATACAGCCAGTCTGCCAAGGATGTCTCTGGCC...GCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR CCA 90 bp | GTAGATTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCGAGTCTGTCTTCAGCTaGGCCTTGTCCACTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: VDSIPKWAFQRWLELWLLESVFS*ALSTVG Trigger: ACCCACAGTGGACAAGGCCCAGCTGAAGACAGACTC...GAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAATCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR TCA 90 bp | TTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCCACTTCCTTCTTCTCTaGTGTTCCAGACCTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: FHPQMGISKMAGAVVALCHFLLL*CSRPHL Trigger: CAGGTGAGGTCTGGAACATCAGAGAAGAAGGAAGTG...GCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR TCA 90 bp | GGTAGATTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTGCCAGCACCGGAATCTaGAGTAACACTGGAATCTCC | + |
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Preference number: 4 (lower is better) Translates to: GRFHPQMGISKMAGAVVAASTGI*SNTGIS Trigger: GGAGATTCCAGTGTTACTTCAGATTCCGGTGCTGGC...AGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAATCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR CCA 90 bp | GGAAGGATGAAGAGTCAATACAGACTTCAAAGATGGCTGGAGCTGTGGTTGCTCGAGTCTGTCTTCAGCTaGGCCTTGTCCACTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GRMKSQYRLQRWLELWLLESVFS*ALSTVG Trigger: ACCCACAGTGGACAAGGCCCAGCTGAAGACAGACTC...GAGCAACCACAGCTCCAGCCATCTTTGAAGTCTGTATTGACTCTTCATCCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| CDS-3UTR TCA 90 bp | AATAAAATGTGCAGTGTAGATATGGTTGCAACAACAAAGGACACCTGCGTGCACCTTGTCCACTGTGGGTaGGCTTTTGCCAGCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NKMCSVDMVATTKDTCVHLVHCG*AFASAG Trigger: CCCAGCGCTGGCAAAAGCTCACCCACAGTGGACAAG...GTGCACGCAGGTGTCCTTTGTTGTTGCAACCATATCTACACTGCACATTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| CDS-3UTR GCA 90 bp | CCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAACCAGACCATCCAAGGTTCAGTCCCGTGTaGTGCCACTGCAGCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PQSLTKCETQVSLEPDHPRFSPV*CHCSFL Trigger: AAGGAAGCTGCAGTGGCAGCACACGGGACTGAACCT...TGGATGGTCTGGTTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| CDS-3UTR CCA 90 bp | GTAGATTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCCGCCAGAGCCTTTGTTaGTGGAACCAACCAAATAGG | + |
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Preference number: 4 (lower is better) Translates to: VDSIPKWAFQRWLELWLLRQSLC*WNQPNR Trigger: CCTATTTGGTTGGTTCCACCAACAAAGGCTCTGGCG...GAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAATCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR CCA 90 bp | CCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAACCAGACCATCCATCGTCTTCTGTCATCTaGCTCAAGTGCTCGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PQSLTKCETQVSLEPDHPSSSVI*LKCSGR Trigger: CCTCCCCGAGCACTTGAGCCAGATGACAGAAGACGA...TGGATGGTCTGGTTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| CDS-3UTR CCA 90 bp | CCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAACCAGACCATCCACGGGGTGCTTTCTCCTaGGAGTTCACCAGTCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: PQSLTKCETQVSLEPDHPRGAFS*EFTSLK Trigger: CTTGAGACTGGTGAACTCCCAGGAGAAAGCACCCCG...TGGATGGTCTGGTTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| CDS-3UTR TCA 90 bp | TCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTGCCAGCACCGGAATCTaGAGTAACACTGGAATCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSLNCCSHSRTAGCFASCASTGI*SNTGIS Trigger: GGAGATTCCAGTGTTACTTCAGATTCCGGTGCTGGC...ACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR TCA 90 bp | CCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAACCAGACCATCCAGCCAGCACCGGAATCTaGAGTAACACTGGAATCTCC | + |
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Preference number: 4 (lower is better) Translates to: PQSLTKCETQVSLEPDHPASTGI*SNTGIS Trigger: GGAGATTCCAGTGTTACTTCAGATTCCGGTGCTGGC...TGGATGGTCTGGTTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
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| CDS-3UTR GCA 90 bp | GTAGATTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCCCAACAGTGTCTGTCTaGTCAGGAGAATCTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: VDSIPKWAFQRWLELWLLPTVSV*SGESQH Trigger: ATGCTGAGATTCTCCTGAGCAGACAGACACTGTTGG...GAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAATCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR GCA 90 bp | AATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTCAAGGTAGATTCAGTCCCGTGTGCTaGCACTGCAGCTTCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: NCCSHSRTAGCFASCQGRFSPVC*HCSFLA Trigger: AGCAAGGAAGCTGCAGTGGCAGCACACGGGACTGAA...TCTACCTTGACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR GCA 90 bp | GTTGCTTTGCTAGCTGTCAAGGTAGATTCCATCCCCAAATGGGCATTTCAAAGAAGGTTCAGTCCCGTGTaGTGCCACTGCAGCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VALLAVKVDSIPKWAFQRRFSPV*CHCSFL Trigger: AAGGAAGCTGCAGTGGCAGCACACGGGACTGAACCT...TCTTTGAAATGCCCATTTGGGGATGGAATCTACCTTGACAGCTAGCAAAGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
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| CDS-3UTR CCA 90 bp | GTTGCTTTGCTAGCTGTCAAGGTAGATTCCATCCCCAAATGGGCATTTCAAAGATCGTCTTCTGTCATCTaGCTCAAGTGCTCGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VALLAVKVDSIPKWAFQRSSSVI*LKCSGR Trigger: CCTCCCCGAGCACTTGAGCCAGATGACAGAAGACGA...TCTTTGAAATGCCCATTTGGGGATGGAATCTACCTTGACAGCTAGCAAAGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTGCTGGGGACCACTTCTaGATGTTCTTGTGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLNCCSHSRTAGCFASCAGDHF*MFLCLC Trigger: ACAGAGGCACAAGAACATCCAGAAGTGGTCCCCAGC...ACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAACCAGACCATCCAGCTGGGGACCACTTCTaGATGTTCTTGTGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQSLTKCETQVSLEPDHPAGDHF*MFLCLC Trigger: ACAGAGGCACAAGAACATCCAGAAGTGGTCCCCAGC...TGGATGGTCTGGTTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTGGCCAGAGACATCCTTaGCAGACTGGCTGTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLNCCSHSRTAGCFASCGQRHP*QTGCIL Trigger: CAGAATACAGCCAGTCTGCCAAGGATGTCTCTGGCC...ACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGATGAAGAGTCAATACAGACTTCAAAGATGGCTGGAGCTGTGGTTGCTGGCCAGAGACATCCTTaGCAGACTGGCTGTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKDEESIQTSKMAGAVVAGQRHP*QTGCIL Trigger: CAGAATACAGCCAGTCTGCCAAGGATGTCTCTGGCC...AGCAACCACAGCTCCAGCCATCTTTGAAGTCTGTATTGACTCTTCATCCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR TCA 90 bp | GGTAGATTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTTTTCCTCATCGTTCCTaGAGCAGCGTCATAGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRFHPQMGISKMAGAVVAFPHRS*SSVIVK Trigger: CTTAACTATGACGCTGCTTCAGGAACGATGAGGAAA...AGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAATCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR TCA 90 bp | GTAGATTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTTTCCTCATCGTTCCTaGAGCAGCGTCATAGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VDSIPKWAFQRWLELWLLFPHRS*SSVIVK Trigger: CTTAACTATGACGCTGCTTCAGGAACGATGAGGAAA...GAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAATCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGATTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTCTTGTTGCCAGAGTaGAATCTCTGTCTCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRFHPQMGISKMAGAVVALLLPE*NLCLKA Trigger: TGCTTTGAGACAGAGATTTCACTCTGGCAACAAGAG...AGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAATCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGATGAAGAGTCAATACAGACTTCAAAGATGGCTGGAGCTGTGGTTGCTCCTTCAGGGCTCTTGTTaGCAGAGTGAAATCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRMKSQYRLQRWLELWLLLQGSC*QSEISV Trigger: GACAGAGATTTCACTCTGGCAACAAGAGCCCTGAAG...GAGCAACCACAGCTCCAGCCATCTTTGAAGTCTGTATTGACTCTTCATCCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR GCA 90 bp | TTAATCAAGTCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTCTGTGGGTGAGCTTTTaGCAGCGCTGGGAACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIKSSLNCCSHSRTAGCFLWVSF*QRWELG Trigger: GCCAAGTTCCCAGCGCTGGCAAAAGCTCACCCACAG...AAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGACTTGATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTAAGGAAGGATGAAGAGTCAATACAGACTTCAAAGATGGCTGGAGCTGTGTTCAGTCCCGTGTGCTaGCACTGCAGCTTCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVRKDEESIQTSKMAGAVFSPVC*HCSFLA Trigger: AGCAAGGAAGCTGCAGTGGCAGCACACGGGACTGAA...CACAGCTCCAGCCATCTTTGAAGTCTGTATTGACTCTTCATCCTTCCTTACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCTTTGCTAGCTGTCAAGGTAGATTCCATCCCCAAATGGGCATTTCAAAGAACATCCTTGGCAGACTaGCTGTATTCTGTCGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VALLAVKVDSIPKWAFQRTSLAD*LYSVGV Trigger: CACCCCGACAGAATACAGCCAGTCTGCCAAGGATGT...TCTTTGAAATGCCCATTTGGGGATGGAATCTACCTTGACAGCTAGCAAAGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTAACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTCTGCAGCTTCCTTGCTaGGTGGGCAGCCTCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALTTTYPVLFLKASYNVLLQLPC*VGSLLV Trigger: CACCAGGAGGCTGCCCACCCAGCAAGGAAGCTGCAG...AAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTTAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCTTTGCTAGCTGTCAAGGTAGATTCCATCCCCAAATGGGCATTTCAAAGACCGCTGAGGAACTTCTaGATCTCCAACAGTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VALLAVKVDSIPKWAFQRPLRNF*ISNSVC Trigger: ACAGACACTGTTGGAGATTCAGAAGTTCCTCAGCGG...TCTTTGAAATGCCCATTTGGGGATGGAATCTACCTTGACAGCTAGCAAAGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR TCA 90 bp | TTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCCCACTTCCATGCTTCTaGATCATGGCACTTAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: FHPQMGISKMAGAVVALCPLPCF*IMALKI Trigger: AATTTTAAGTGCCATGATTCAGAAGCATGGAAGTGG...GCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAGGATGAAGAGTCAATACAGACTTCAAAGATGGCTGGAGCTGTGGTTGCTTGTGTTCATAATGGGTaGTTTATGGCTGGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKDEESIQTSKMAGAVVACVHNG*FMAGDH Trigger: GTGGTCCCCAGCCATAAATCACCCATTATGAACACA...AGCAACCACAGCTCCAGCCATCTTTGAAGTCTGTATTGACTCTTCATCCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR TCA 90 bp | AACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTTAACCCTTGTCCACTGTGGGTaGGCTTTTGCCAGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NNYLPCSFLKSQLQCALTLVHCG*AFASAG Trigger: CCCAGCGCTGGCAAAAGCTCACCCACAGTGGACAAG...GGTTAAAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGATTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCAGGGAGTCCAAGCTTaGCAGCTTCAATTAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GRFHPQMGISKMAGAVVAQGVQA*QLQLKS Trigger: AGATTTTAATTGAAGCTGGCAAGCTTGGACTCCCTG...AGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAATCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | TTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCGCTCCTTTTCCAATGTaGTTTAATGGTTCCGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: FHPQMGISKMAGAVVALCAPFPM*FNGSVT Trigger: TGTAACGGAACCATTAAAGCACATTGGAAAAGGAGC...GCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTCCTGTAAGAGAAATCTaGATCACCTGCTCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSLNCCSHSRTAGCFASCPVREI*ITCSTM Trigger: CATGGTGGAGCAGGTGATGCAGATTTCTCTTACAGG...ACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGATGAAGAGTCAATACAGACTTCAAAGATGGCTGGAGCTGTGGTTGCTCCTGTAAGAGAAATCTaGATCACCTGCTCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: RKDEESIQTSKMAGAVVAPVREI*ITCSTM Trigger: CATGGTGGAGCAGGTGATGCAGATTTCTCTTACAGG...AGCAACCACAGCTCCAGCCATCTTTGAAGTCTGTATTGACTCTTCATCCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTCTTCAGGGCTCTTGTTaGCAGAGTGAAATCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLNCCSHSRTAGCFASCLQGSC*QSEISV Trigger: GACAGAGATTTCACTCTGGCAACAAGAGCCCTGAAG...ACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | TTAATCAAGTCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTAGGTTCAGTCCCGTGTaGTGCCACTGCAGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIKSSLNCCSHSRTAGCFRFSPV*CHCSFL Trigger: AAGGAAGCTGCAGTGGCAGCACACGGGACTGAACCT...AAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGACTTGATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | TTAATCAAGTCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTTCGTCTTCTGTCATCTaGCTCAAGTGCTCGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIKSSLNCCSHSRTAGCFSSSVI*LKCSGR Trigger: CCTCCCCGAGCACTTGAGCCAGATGACAGAAGACGA...AAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGACTTGATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTAAGGAAGGATGAAGAGTCAATACAGACTTCAAAGATGGCTGGAGCTGTGACATCCTTGGCAGACTaGCTGTATTCTGTCGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FVRKDEESIQTSKMAGAVTSLAD*LYSVGV Trigger: CACCCCGACAGAATACAGCCAGTCTGCCAAGGATGT...CACAGCTCCAGCCATCTTTGAAGTCTGTATTGACTCTTCATCCTTCCTTACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR TCA 90 bp | AATAAAATGTGCAGTGTAGATATGGTTGCAACAACAAAGGACACCTGCGTGCACCACTTCCTTCTTCTCTaGTGTTCCAGACCTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKMCSVDMVATTKDTCVHHFLLL*CSRPHL Trigger: CAGGTGAGGTCTGGAACATCAGAGAAGAAGGAAGTG...GTGCACGCAGGTGTCCTTTGTTGTTGCAACCATATCTACACTGCACATTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR TCA 90 bp | AATAAAATGTGCAGTGTAGATATGGTTGCAACAACAAAGGACACCTGCGTGCACCCGCTGAGGAACTTCTaGATCTCCAACAGTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKMCSVDMVATTKDTCVHPLRNF*ISNSVC Trigger: ACAGACACTGTTGGAGATTCAGAAGTTCCTCAGCGG...GTGCACGCAGGTGTCCTTTGTTGTTGCAACCATATCTACACTGCACATTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR GCA 90 bp | GTTGCTTTGCTAGCTGTCAAGGTAGATTCCATCCCCAAATGGGCATTTCAAAGACCTGTAAGAGAAATCTaGATCACCTGCTCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: VALLAVKVDSIPKWAFQRPVREI*ITCSTM Trigger: CATGGTGGAGCAGGTGATGCAGATTTCTCTTACAGG...TCTTTGAAATGCCCATTTGGGGATGGAATCTACCTTGACAGCTAGCAAAGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | GTTGCTTTGCTAGCTGTCAAGGTAGATTCCATCCCCAAATGGGCATTTCAAAGACTTCAGGGCTCTTGTTaGCAGAGTGAAATCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VALLAVKVDSIPKWAFQRLQGSC*QSEISV Trigger: GACAGAGATTTCACTCTGGCAACAAGAGCCCTGAAG...TCTTTGAAATGCCCATTTGGGGATGGAATCTACCTTGACAGCTAGCAAAGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCTTTGCTAGCTGTCAAGGTAGATTCCATCCCCAAATGGGCATTTCAAAGATGGGTGATTTATGGCTaGGGACCACTTCTGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VALLAVKVDSIPKWAFQRWVIYG*GPLLDV Trigger: AACATCCAGAAGTGGTCCCCAGCCATAAATCACCCA...TCTTTGAAATGCCCATTTGGGGATGGAATCTACCTTGACAGCTAGCAAAGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAACCAGACCATCCAAAAGAATCCAGTCTGTaGAAACAGTCTGACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQSLTKCETQVSLEPDHPKESSL*KQSDSS Trigger: GGAACTGTCAGACTGTTTGCACAGACTGGATTCTTT...TGGATGGTCTGGTTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR GCA 90 bp | AATAAAATGTGCAGTGTAGATATGGTTGCAACAACAAAGGACACCTGCGTGCACCCAACAGTGTCTGTCTaGTCAGGAGAATCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKMCSVDMVATTKDTCVHPTVSV*SGESQH Trigger: ATGCTGAGATTCTCCTGAGCAGACAGACACTGTTGG...GTGCACGCAGGTGTCCTTTGTTGTTGCAACCATATCTACACTGCACATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR CCA 90 bp | AACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTTAACCCGGGGTGCTTTCTCCTaGGAGTTCACCAGTCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NNYLPCSFLKSQLQCALTRGAFS*EFTSLK Trigger: CTTGAGACTGGTGAACTCCCAGGAGAAAGCACCCCG...GGTTAAAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | AACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTTAACCGAGTCTGTCTTCAGCTaGGCCTTGTCCACTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NNYLPCSFLKSQLQCALTESVFS*ALSTVG Trigger: ACCCACAGTGGACAAGGCCCAGCTGAAGACAGACTC...GGTTAAAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR TCA 90 bp | CCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAACCAGACCATCCACCACTTCCATGCTTCTaGATCATGGCACTTAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: PQSLTKCETQVSLEPDHPPLPCF*IMALKI Trigger: AATTTTAAGTGCCATGATTCAGAAGCATGGAAGTGG...TGGATGGTCTGGTTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR GCA 90 bp | AATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTCAAGGTAGAAAAGAATCCAGTCTGTaGAAACAGTCTGACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCCSHSRTAGCFASCQGRKESSL*KQSDSS Trigger: GGAACTGTCAGACTGTTTGCACAGACTGGATTCTTT...TCTACCTTGACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | TTAATCAAGTCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTCCAACAGTGTCTGTCTaGTCAGGAGAATCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIKSSLNCCSHSRTAGCFPTVSV*SGESQH Trigger: ATGCTGAGATTCTCCTGAGCAGACAGACACTGTTGG...AAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGACTTGATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAACCAGACCATCCAGCTCCTTTTCCAATGTaGTTTAATGGTTCCGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PQSLTKCETQVSLEPDHPAPFPM*FNGSVT Trigger: TGTAACGGAACCATTAAAGCACATTGGAAAAGGAGC...TGGATGGTCTGGTTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR GCA 90 bp | CCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCATTGTTCTTTAATGAATTCACCTaGTCCTTTTCCAATGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PKWAFQRWLELWLLCALFFNEFT*SFSNVL Trigger: AAGCACATTGGAAAAGGAGCAGGTGAATTCATTAAA...GAACAATGCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCTTTGCTAGCTGTCAAGGTAGATTCCATCCCCAAATGGGCATTTCAAAGAGTTAAGCATATCTGTTaGGTCAATCCAGTCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VALLAVKVDSIPKWAFQRVKHIC*VNPVVI Trigger: GATGACGACTGGATTGACCCAACAGATATGCTTAAC...TCTTTGAAATGCCCATTTGGGGATGGAATCTACCTTGACAGCTAGCAAAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTATAGTACTTTTGGCATaGGTCATCCTTATAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLNCCSHSRTAGCFASCIVLLA*VILIGP Trigger: TGGACCTATAAGGATGACCCATGCCAAAAGTACTAT...ACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAATGTGCAGTGTAGATATGGTTGCAACAACAAAGGACACCTGCGTGCACCAGAGCCTTTGTTGGTaGAACCAACCAAATAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NKMCSVDMVATTKDTCVHQSLCW*NQPNRV Trigger: AACCCTATTTGGTTGGTTCCACCAACAAAGGCTCTG...GTGCACGCAGGTGTCCTTTGTTGTTGCAACCATATCTACACTGCACATTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCCATTCCCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAATGGGTGATTTATGGCTaGGGACCACTTCTGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: IKPFPQSLTKCETQVSLEWVIYG*GPLLDV Trigger: AACATCCAGAAGTGGTCCCCAGCCATAAATCACCCA...TTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGGGAATGGCTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTAACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTCCGCTGAGGAACTTCTaGATCTCCAACAGTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALTTTYPVLFLKASYNVLPLRNF*ISNSVC Trigger: ACAGACACTGTTGGAGATTCAGAAGTTCCTCAGCGG...AAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTTAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR TCA 90 bp | AATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTCAAGGTAGACCACTTCCATGCTTCTaGATCATGGCACTTAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: NCCSHSRTAGCFASCQGRPLPCF*IMALKI Trigger: AATTTTAAGTGCCATGATTCAGAAGCATGGAAGTGG...TCTACCTTGACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | TTAATCAAGTCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTCAGAGCCTTTGTTGGTaGAACCAACCAAATAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LIKSSLNCCSHSRTAGCFQSLCW*NQPNRV Trigger: AACCCTATTTGGTTGGTTCCACCAACAAAGGCTCTG...AAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGACTTGATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTAACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTCGCCAGAGCCTTTGTTaGTGGAACCAACCAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALTTTYPVLFLKASYNVLRQSLC*WNQPNR Trigger: CCTATTTGGTTGGTTCCACCAACAAAGGCTCTGGCG...AAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTTAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATCAAAAATCAACTGTTCAGACAAAATGTCCTTGTTGAAGCAGCCTGCCGCCAGAGCCTTTGTTaGTGGAACCAACCAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEIKNQLFRQNVLVEAACRQSLC*WNQPNR Trigger: CCTATTTGGTTGGTTCCACCAACAAAGGCTCTGGCG...GCAGGCTGCTTCAACAAGGACATTTTGTCTGAACAGTTGATTTTTGATTTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR TCA 90 bp | AACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTTAACCTGTGTTCATAATGGGTaGTTTATGGCTGGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NNYLPCSFLKSQLQCALTCVHNG*FMAGDH Trigger: GTGGTCCCCAGCCATAAATCACCCATTATGAACACA...GGTTAAAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | TTAATCAAGTCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTAAAGAATCCAGTCTGTaGAAACAGTCTGACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIKSSLNCCSHSRTAGCFKESSL*KQSDSS Trigger: GGAACTGTCAGACTGTTTGCACAGACTGGATTCTTT...AAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGACTTGATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCCATTCCCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAAGTTAAGCATATCTGTTaGGTCAATCCAGTCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: IKPFPQSLTKCETQVSLEVKHIC*VNPVVI Trigger: GATGACGACTGGATTGACCCAACAGATATGCTTAAC...TTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGGGAATGGCTTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTAACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTTGGGTGATTTATGGCTaGGGACCACTTCTGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALTTTYPVLFLKASYNVLWVIYG*GPLLDV Trigger: AACATCCAGAAGTGGTCCCCAGCCATAAATCACCCA...AAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTTAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAAATCAAAAATCAACTGTTCAGACAAAATGTCCTTGTTGAAGCAGCCTGCTTTCCTCATCGTTCCTaGAGCAGCGTCATAGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEIKNQLFRQNVLVEAACFPHRS*SSVIVK Trigger: CTTAACTATGACGCTGCTTCAGGAACGATGAGGAAA...GCAGGCTGCTTCAACAAGGACATTTTGTCTGAACAGTTGATTTTTGATTTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR TCA 90 bp | TTAATCAAGTCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTATCCTTATAGGTCCATaGACTTGTAAACCATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIKSSLNCCSHSRTAGCFILIGP*TCKPFP Trigger: TGGGAATGGTTTACAAGTTCATGGACCTATAAGGAT...AAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGACTTGATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTAACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTCTCTTGTTGCCAGAGTaGAATCTCTGTCTCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALTTTYPVLFLKASYNVLLLLPE*NLCLKA Trigger: TGCTTTGAGACAGAGATTTCACTCTGGCAACAAGAG...AAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTTAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAAATCAAAAATCAACTGTTCAGACAAAATGTCCTTGTTGAAGCAGCCTGCCTCTTGTTGCCAGAGTaGAATCTCTGTCTCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KEIKNQLFRQNVLVEAACLLLPE*NLCLKA Trigger: TGCTTTGAGACAGAGATTTCACTCTGGCAACAAGAG...GCAGGCTGCTTCAACAAGGACATTTTGTCTGAACAGTTGATTTTTGATTTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR CCA 90 bp | TTAATCAAGTCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTATAGTACTTTTGGCATaGGTCATCCTTATAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIKSSLNCCSHSRTAGCFIVLLA*VILIGP Trigger: TGGACCTATAAGGATGACCCATGCCAAAAGTACTAT...AAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGACTTGATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTAACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTCAGAGCCTTTGTTGGTaGAACCAACCAAATAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALTTTYPVLFLKASYNVLQSLCW*NQPNRV Trigger: AACCCTATTTGGTTGGTTCCACCAACAAAGGCTCTG...AAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTTAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTAACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTCAGGGAGTCCAAGCTTaGCAGCTTCAATTAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ALTTTYPVLFLKASYNVLQGVQA*QLQLKS Trigger: AGATTTTAATTGAAGCTGGCAAGCTTGGACTCCCTG...AAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTTAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTAACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTGTTAAGCATATCTGTTaGGTCAATCCAGTCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ALTTTYPVLFLKASYNVLVKHIC*VNPVVI Trigger: GATGACGACTGGATTGACCCAACAGATATGCTTAAC...AAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTTAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTAACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTATCCTTATAGGTCCATaGACTTGTAAACCATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALTTTYPVLFLKASYNVLILIGP*TCKPFP Trigger: TGGGAATGGTTTACAAGTTCATGGACCTATAAGGAT...AAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTTAAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAAATCAAAAATCAACTGTTCAGACAAAATGTCCTTGTTGAAGCAGCCTGCATCCTTATAGGTCCATaGACTTGTAAACCATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KEIKNQLFRQNVLVEAACILIGP*TCKPFP Trigger: TGGGAATGGTTTACAAGTTCATGGACCTATAAGGAT...GCAGGCTGCTTCAACAAGGACATTTTGTCTGAACAGTTGATTTTTGATTTCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR GCA 90 bp | AACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTTAACCGCTCCTTTTCCAATGTaGTTTAATGGTTCCGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: NNYLPCSFLKSQLQCALTAPFPM*FNGSVT Trigger: TGTAACGGAACCATTAAAGCACATTGGAAAAGGAGC...GGTTAAAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCCATTCCCACAGTCACTGACAAAGTGTGAAACTCAAGTATCGCTAGAATTTAATGAATTCACCTaGTCCTTTTCCAATGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IKPFPQSLTKCETQVSLEFNEFT*SFSNVL Trigger: AAGCACATTGGAAAAGGAGCAGGTGAATTCATTAAA...TTCTAGCGATACTTGAGTTTCACACTTTGTCAGTGACTGTGGGAATGGCTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR GCA 90 bp | AACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTTAACCTTTAATGAATTCACCTaGTCCTTTTCCAATGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NNYLPCSFLKSQLQCALTFNEFT*SFSNVL Trigger: AAGCACATTGGAAAAGGAGCAGGTGAATTCATTAAA...GGTTAAAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS CCA 90 bp | GACAGGTTCAGTCCCGTGTGCTGCCACTGCAGCTTCCTTGCTGGGTaGGCAGCCTCCTGGTGGGCTGCACTCGGAGTCTGTCTTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DRFSPVCCHCSFLAG*AASWWAALGVCLQL Trigger: CAGCTGAAGACAGACTCCGAGTGCAGCCCACCAGGAGGCTGCCCACCCAGCAAGGAAGCTGCAGTGGCAGCACACGGGACTGAACCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
||
| CDS CCA 90 bp | CTTTTGCCAGCGCTGGGAACTTGGCCAGAGACATCCTTGGCAGACTaGCTGTATTCTGTCGGGGTGCTTTCTCCTGGGAGTTCACCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLPALGTWPETSLAD*LYSVGVLSPGSSPV Trigger: GACTGGTGAACTCCCAGGAGAAAGCACCCCGACAGAATACAGCCAGTCTGCCAAGGATGTCTCTGGCCAAGTTCCCAGCGCTGGCAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
||
| CDS CCA 90 bp | TGGGTGAGCTTTTGCCAGCGCTGGGAACTTGGCCAGAGACATCCTTaGCAGACTGGCTGTATTCTGTCGGGGTGCTTTCTCCTGGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: WVSFCQRWELGQRHP*QTGCILSGCFLLGV Trigger: AACTCCCAGGAGAAAGCACCCCGACAGAATACAGCCAGTCTGCCAAGGATGTCTCTGGCCAAGTTCCCAGCGCTGGCAAAAGCTCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
||
| CDS CCA 90 bp | TCTTCAGCTGGGCCTTGTCCACTGTGGGTGAGCTTTTGCCAGCGCTaGGAACTTGGCCAGAGACATCCTTGGCAGACTGGCTGTATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSAGPCPLWVSFCQR*ELGQRHPWQTGCIL Trigger: CAGAATACAGCCAGTCTGCCAAGGATGTCTCTGGCCAAGTTCCCAGCGCTGGCAAAAGCTCACCCACAGTGGACAAGGCCCAGCTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
||
| CDS-3UTR CAA 90 bp | TTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCGCCAGCGCTGGGAACTaGGCCAGAGACATCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FHPQMGISKMAGAVVALCASAGN*ARDILG Trigger: GCCAAGGATGTCTCTGGCCAAGTTCCCAGCGCTGGC...GCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS GCA 90 bp | AGGGCCTTGCTCGATGGAGCCAGCTGGGCCCCTGTAAGAGAAATCTaGATCACCTGCTCCACCATGGAGTCTATAGTCAAGTCCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RALLDGASWAPVREI*ITCSTMESIVKSLL Trigger: CAGAAGGGACTTGACTATAGACTCCATGGTGGAGCAGGTGATGCAGATTTCTCTTACAGGGGCCCAGCTGGCTCCATCGAGCAAGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGATGAAGAGTCAATACAGACTTCAAAGATGGCTGGAGCTGTGGTTGCTCGCCACTGCAGCTTCCTaGCTGGGTGGGCAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRMKSQYRLQRWLELWLLATAAS*LGGQPP Trigger: AGGAGGCTGCCCACCCAGCAAGGAAGCTGCAGTGGC...GAGCAACCACAGCTCCAGCCATCTTTGAAGTCTGTATTGACTCTTCATCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS CCA 90 bp | ACTCGCATGCATTTTGTCATAAGGGCCTTGCTCGATGGAGCCAGCTaGGCCCCTGTAAGAGAAATCTGCATCACCTGCTCCACCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TRMHFVIRALLDGAS*APVREICITCSTME Trigger: CTCCATGGTGGAGCAGGTGATGCAGATTTCTCTTACAGGGGCCCAGCTGGCTCCATCGAGCAAGGCCCTTATGACAAAATGCATGCGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGATGAAGAGTCAATACAGACTTCAAAGATGGCTGGAGCTGTGGTTGCTCGCCAGCGCTGGGAACTaGGCCAGAGACATCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRMKSQYRLQRWLELWLLASAGN*ARDILG Trigger: GCCAAGGATGTCTCTGGCCAAGTTCCCAGCGCTGGC...GAGCAACCACAGCTCCAGCCATCTTTGAAGTCTGTATTGACTCTTCATCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS-3UTR CAA 90 bp | AATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTCAAGGTAGAGCCACTGCAGCTTCCTaGCTGGGTGGGCAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NCCSHSRTAGCFASCQGRATAAS*LGGQPP Trigger: AGGAGGCTGCCCACCCAGCAAGGAAGCTGCAGTGGC...TCTACCTTGACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS CCA 90 bp | CATCTCTCTTACTCGCATGCATTTTGTCATAAGGGCCTTGCTCGATaGAGCCAGCTGGGCCCCTGTAAGAGAAATCTGCATCACCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLSYSHAFCHKGLAR*SQLGPCKRNLHHLL Trigger: GAGCAGGTGATGCAGATTTCTCTTACAGGGGCCCAGCTGGCTCCATCGAGCAAGGCCCTTATGACAAAATGCATGCGAGTAAGAGAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
||
| CDS-3UTR CAA 90 bp | TTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGTGCTGGCCAGAGACATCCTaGGCAGACTGGCTGTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: FHPQMGISKMAGAVVALCWPETS*ADWLYS Trigger: AGAATACAGCCAGTCTGCCAAGGATGTCTCTGGCCA...GCACAGAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS TCA 90 bp | CAGAAGCTCAGGACAGCCAGCGCCAGGATCGCCAGCACCGGAATCTaGAGTAACACTGGAATCTCCTTCATGAGCGCTTTAATGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: QKLRTASARIASTGI*SNTGISFMSALMNS Trigger: TGAATTCATTAAAGCGCTCATGAAGGAGATTCCAGTGTTACTTCAGATTCCGGTGCTGGCGATCCTGGCGCTGGCTGTCCTGAGCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
||
| CDS-3UTR CAA 90 bp | GTAGATTCCATCCCCAAATGGGCATTTCAAAGATGGCTGGAGCTGTGGTTGCTCTGGCCAGAGACATCCTaGGCAGACTGGCTGTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: VDSIPKWAFQRWLELWLLWPETS*ADWLYS Trigger: AGAATACAGCCAGTCTGCCAAGGATGTCTCTGGCCA...GAGCAACCACAGCTCCAGCCATCTTTGAAATGCCCATTTGGGGATGGAATCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CAA 90 bp | AACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTTAACCGCCAGCGCTGGGAACTaGGCCAGAGACATCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NNYLPCSFLKSQLQCALTASAGN*ARDILG Trigger: GCCAAGGATGTCTCTGGCCAAGTTCCCAGCGCTGGC...GGTTAAAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCCCTGAATTGCTGTAGTCACTCAAGAACAGCAGGTTGCTTTGCTAGCTGTGAGCTCATAGTACTTTaGGCATGGGTCATCCTTATA | + |
|
Preference number: 5 (lower is better) Translates to: SSLNCCSHSRTAGCFASCELIVL*AWVILI Trigger: TATAAGGATGACCCATGCCAAAAGTACTATGAGCTC...ACAGCTAGCAAAGCAACCTGCTGTTCTTGAGTGACTACAGCAATTCAGGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGATGAAGAGTCAATACAGACTTCAAAGATGGCTGGAGCTGTGGTTGCTGAGCTCATAGTACTTTaGGCATGGGTCATCCTTATA | + |
|
Preference number: 5 (lower is better) Translates to: RKDEESIQTSKMAGAVVAELIVL*AWVILI Trigger: TATAAGGATGACCCATGCCAAAAGTACTATGAGCTC...AGCAACCACAGCTCCAGCCATCTTTGAAGTCTGTATTGACTCTTCATCCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106613.2 |
||
| CDS GCA 90 bp | TCCTTCATGAGCGCTTTAATGAATTCACCTGCTCCTTTTCCAATGTaGTTTAATGGTTCCGTTACAAAGTTAGTGAATGTAATCGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFMSALMNSPAPFPM*FNGSVTKLVNVIAR Trigger: TCTGGCGATTACATTCACTAACTTTGTAACGGAACCATTAAAGCACATTGGAAAAGGAGCAGGTGAATTCATTAAAGCGCTCATGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
||
| CDS-3UTR CAA 90 bp | GCTTTAACAACTACCTACCCTGTTCTTTTCTTAAAAGCCAGTTACAATGTGCTTGAGCTCATAGTACTTTaGGCATGGGTCATCCTTATA | + |
|
Preference number: 5 (lower is better) Translates to: ALTTTYPVLFLKASYNVLELIVL*AWVILI Trigger: TATAAGGATGACCCATGCCAAAAGTACTATGAGCTC...AAGCACATTGTAACTGGCTTTTAAGAAAAGAACAGGGTAGGTAGTTGTTAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 |
||
| CDS GCA 72 bp | CAGGTTCAGTCCCGTGTGCTGCCACTGCAGCTTCCTTaGTGGGTGGGCAGCCTCCTGGTGGGCTGCACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: QVQSRVLPLQLP*WVGSLLVGCTR Trigger: CCGAGTGCAGCCCACCAGGAGGCTGCCCACCCAGCAAGGAAGCTGCAGTGGCAGCACACGGGACTGAACCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
||
| CDS GCA 72 bp | TTAGCCACATGGGCTGCTGACAGGTTCAGTCCCGTGTaGTGCCACTGCAGCTTCCTTGCTGGGTGGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LATWAADRFSPV*CHCSFLAGWAA Trigger: GGCTGCCCACCCAGCAAGGAAGCTGCAGTGGCAGCACACGGGACTGAACCTGTCAGCAGCCCATGTGGCTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
||
| CDS CCA 72 bp | CCTCCTGGTGGGCTGCACTCGGAGTCTGTCTTCAGCTaGGCCTTGTCCACTGTGGGTGAGCTTTTGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PPGGLHSESVFS*ALSTVGELLPA Trigger: CGCTGGCAAAAGCTCACCCACAGTGGACAAGGCCCAGCTGAAGACAGACTCCGAGTGCAGCCCACCAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
||
| CDS CAA 72 bp | GGTGGGCTGCACTCGGAGTCTGTCTTCAGCTGGGCCTaGTCCACTGTGGGTGAGCTTTTGCCAGCGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGLHSESVFSWA*STVGELLPALG Trigger: TCCCAGCGCTGGCAAAAGCTCACCCACAGTGGACAAGGCCCAGCTGAAGACAGACTCCGAGTGCAGCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS CCA 72 bp | GGGCCTTGTCCACTGTGGGTGAGCTTTTGCCAGCGCTaGGAACTTGGCCAGAGACATCCTTGGCAGACTGGC | + |
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Preference number: 6 (lower is better) Translates to: GPCPLWVSFCQR*ELGQRHPWQTG Trigger: GCCAGTCTGCCAAGGATGTCTCTGGCCAAGTTCCCAGCGCTGGCAAAAGCTCACCCACAGTGGACAAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS TCA 72 bp | CGTCGTCCAGGGCTCCGGGCTTCCACTCCTCTCCGCTaGGGAACTTCTGAATCTCCAACAGTGTCTGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: RRPGLRASTPLR*GTSESPTVSVC Trigger: GCAGACAGACACTGTTGGAGATTCAGAAGTTCCTCAGCGGAGAGGAGTGGAAGCCCGGAGCCCTGGACGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS TCA 72 bp | GGAGTCTGTCTTCAGCTGGGCCTTGTCCACTGTGGGTaGGCTTTTGCCAGCGCTGGGAACTTGGCCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: GVCLQLGLVHCG*AFASAGNLARD Trigger: GTCTCTGGCCAAGTTCCCAGCGCTGGCAAAAGCTCACCCACAGTGGACAAGGCCCAGCTGAAGACAGACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS CCA 72 bp | ACTCGGAGTCTGTCTTCAGCTGGGCCTTGTCCACTGTaGGTGAGCTTTTGCCAGCGCTGGGAACTTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TRSLSSAGPCPL*VSFCQRWELGQ Trigger: CTGGCCAAGTTCCCAGCGCTGGCAAAAGCTCACCCACAGTGGACAAGGCCCAGCTGAAGACAGACTCCGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS CAA 90 bp | GTGGGTGAGCTTTTGCCAGCGCTGGGAACTTGGCCAGAGACATCCTaGGCAGACTGGCTGTATTCTGTCGGGGTGCTTTCTCCTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: VGELLPALGTWPETS*ADWLYSVGVLSPGS Trigger: ACTCCCAGGAGAAAGCACCCCGACAGAATACAGCCAGTCTGCCAAGGATGTCTCTGGCCAAGTTCCCAGCGCTGGCAAAAGCTCACCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS GCA 72 bp | TCTTCAGCTGGGCCTTGTCCACTGTGGGTGAGCTTTTaGCAGCGCTGGGAACTTGGCCAGAGACATCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SSAGPCPLWVSF*QRWELGQRHPW Trigger: CCAAGGATGTCTCTGGCCAAGTTCCCAGCGCTGGCAAAAGCTCACCCACAGTGGACAAGGCCCAGCTGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS CCA 72 bp | GCGCTGGGAACTTGGCCAGAGACATCCTTGGCAGACTaGCTGTATTCTGTCGGGGTGCTTTCTCCTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: ALGTWPETSLAD*LYSVGVLSPGS Trigger: ACTCCCAGGAGAAAGCACCCCGACAGAATACAGCCAGTCTGCCAAGGATGTCTCTGGCCAAGTTCCCAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS CAA 72 bp | GTCTTCAGCTGGGCCTTGTCCACTGTGGGTGAGCTTTaGCCAGCGCTGGGAACTTGGCCAGAGACATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: VFSWALSTVGEL*PALGTWPETSL Trigger: CAAGGATGTCTCTGGCCAAGTTCCCAGCGCTGGCAAAAGCTCACCCACAGTGGACAAGGCCCAGCTGAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS TCA 72 bp | GCTCCGGGCTTCCACTCCTCTCCGCTGAGGAACTTCTaGATCTCCAACAGTGTCTGTCTGCTCAGGAGAATC | + |
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Preference number: 6 (lower is better) Translates to: APGFHSSPLRNF*ISNSVCLLRRI Trigger: GATTCTCCTGAGCAGACAGACACTGTTGGAGATTCAGAAGTTCCTCAGCGGAGAGGAGTGGAAGCCCGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS GCA 72 bp | AAGTCCCTTCTGTCGTCTTCTGTCATCTGGCTCAAGTaGTCGGGGAGGTTCTCTGTCAGGACCACCGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: KSLLSSSVIWLK*SGRFSVRTTEV Trigger: CACTTCGGTGGTCCTGACAGAGAACCTCCCCGAGCACTTGAGCCAGATGACAGAAGACGACAGAAGGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS CCA 72 bp | TTTTGCCAGCGCTGGGAACTTGGCCAGAGACATCCTTaGCAGACTGGCTGTATTCTGTCGGGGTGCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: FCQRWELGQRHP*QTGCILSGCFL Trigger: GAGAAAGCACCCCGACAGAATACAGCCAGTCTGCCAAGGATGTCTCTGGCCAAGTTCCCAGCGCTGGCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS CAA 72 bp | CTTTTGCCAGCGCTGGGAACTTGGCCAGAGACATCCTaGGCAGACTGGCTGTATTCTGTCGGGGTGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLPALGTWPETS*ADWLYSVGVLS Trigger: AGAAAGCACCCCGACAGAATACAGCCAGTCTGCCAAGGATGTCTCTGGCCAAGTTCCCAGCGCTGGCAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS TCA 72 bp | AGGACAGCCAGCGCCAGGATCGCCAGCACCGGAATCTaGAGTAACACTGGAATCTCCTTCATGAGCGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: RTASARIASTGI*SNTGISFMSAL Trigger: TAAAGCGCTCATGAAGGAGATTCCAGTGTTACTTCAGATTCCGGTGCTGGCGATCCTGGCGCTGGCTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS GCA 72 bp | CTCGATGGAGCCAGCTGGGCCCCTGTAAGAGAAATCTaGATCACCTGCTCCACCATGGAGTCTATAGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LDGASWAPVREI*ITCSTMESIVK Trigger: CTTGACTATAGACTCCATGGTGGAGCAGGTGATGCAGATTTCTCTTACAGGGGCCCAGCTGGCTCCATCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS CCA 72 bp | CATTTTGTCATAAGGGCCTTGCTCGATGGAGCCAGCTaGGCCCCTGTAAGAGAAATCTGCATCACCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: HFVIRALLDGAS*APVREICITCS Trigger: GGAGCAGGTGATGCAGATTTCTCTTACAGGGGCCCAGCTGGCTCCATCGAGCAAGGCCCTTATGACAAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS CCA 72 bp | TCTATAGTCAAGTCCCTTCTGTCGTCTTCTGTCATCTaGCTCAAGTGCTCGGGGAGGTTCTCTGTCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: SIVKSLLSSSVI*LKCSGRFSVRT Trigger: GGTCCTGACAGAGAACCTCCCCGAGCACTTGAGCCAGATGACAGAAGACGACAGAAGGGACTTGACTATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS CCA 72 bp | TACTCGCATGCATTTTGTCATAAGGGCCTTGCTCGATaGAGCCAGCTGGGCCCCTGTAAGAGAAATCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: YSHAFCHKGLAR*SQLGPCKRNLH Trigger: ATGCAGATTTCTCTTACAGGGGCCCAGCTGGCTCCATCGAGCAAGGCCCTTATGACAAAATGCATGCGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS CAA 72 bp | ATCTCTCTTACTCGCATGCATTTTGTCATAAGGGCCTaGCTCGATGGAGCCAGCTGGGCCCCTGTAAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: ISLTRMHFVIRA*LDGASWAPVRE Trigger: TTCTCTTACAGGGGCCCAGCTGGCTCCATCGAGCAAGGCCCTTATGACAAAATGCATGCGAGTAAGAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS CAA 90 bp | TCTCAAAGCATCTCTCTTACTCGCATGCATTTTGTCATAAGGGCCTaGCTCGATGGAGCCAGCTGGGCCCCTGTAAGAGAAATCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: SQSISLTRMHFVIRA*LDGASWAPVREICI Trigger: GATGCAGATTTCTCTTACAGGGGCCCAGCTGGCTCCATCGAGCAAGGCCCTTATGACAAAATGCATGCGAGTAAGAGAGATGCTTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS TCA 72 bp | GAGTTCACCAGTCTCAAGGTTTGTGTTCATAATGGGTaGTTTATGGCTGGGGACCACTTCTGGATGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: EFTSLKVCVHNG*FMAGDHFWMFL Trigger: CAAGAACATCCAGAAGTGGTCCCCAGCCATAAATCACCCATTATGAACACAAACCTTGAGACTGGTGAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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| CDS GCA 72 bp | AGCGCTTTAATGAATTCACCTGCTCCTTTTCCAATGTaGTTTAATGGTTCCGTTACAAAGTTAGTGAATGTA | + |
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Preference number: 6 (lower is better) Translates to: SALMNSPAPFPM*FNGSVTKLVNV Trigger: TACATTCACTAACTTTGTAACGGAACCATTAAAGCACATTGGAAAAGGAGCAGGTGAATTCATTAAAGCGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029483.15 ENSMUST00000106609.8 ENSMUST00000106613.2 |
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