Pregenerated sensors for CLCA4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074195Ensembl transcript IDs: ENSMUST00000098549.4
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCATCTACTACCCAGCCTGGTATGTATGCAGCTCTGCTTGATGGGTaGCGTAAACTCCTCCTGGCAGAGTTTGTTCCTCCATCTGCACGG | + |
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Preference number: 5 (lower is better) Translates to: PSTTQPGMYAALLDG*RKLLLAEFVPPSAR Trigger: CCGTGCAGATGGAGGAACAAACTCTGCCAGGAGGAGTTTACGCCACCCATCAAGCAGAGCTGCATACATACCAGGCTGGGTAGTAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS TCA 90 bp | CTGATGAACGTGGACTTTCATCAGGGACAGGCTCTGCCTGAGGGGTaGACATTGCCACTTGTGCGATGTTGGATGGTCCCGAACTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: LMNVDFHQGQALPEG*TLPLVRCWMVPNSN Trigger: ATTTGAGTTCGGGACCATCCAACATCGCACAAGTGGCAATGTTCACCCCTCAGGCAGAGCCTGTCCCTGATGAAAGTCCACGTTCATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 90 bp | GGCCTGGAGGTCTGTGATTCGATTTGGTGGGTACTGATCAGGCAATaGACCAATTGGAACATTGGACATCACAAAGGCACCTCCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: GLEVCDSIWWVLIRQ*TNWNIGHHKGTSRC Trigger: GCATCTGGAGGTGCCTTTGTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATCAGTACCCACCAAATCGAATCACAGACCTCCAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 90 bp | CTCTTCCCCATCGAGTGTGGCCTGGAGGTCTGTGATTCGATTTGGTaGGTACTGATCAGGCAATGGACCAATTGGAACATTGGACATCAC | + |
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Preference number: 5 (lower is better) Translates to: LFPIECGLEVCDSIW*VLIRQWTNWNIGHH Trigger: GTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATCAGTACCCACCAAATCGAATCACAGACCTCCAGGCCACACTCGATGGGGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS TCA 90 bp | CCATCGAGTGTGGCCTGGAGGTCTGTGATTCGATTTGGTGGGTACTaGTCAGGCAATGGACCAATTGGAACATTGGACATCACAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: PSSVAWRSVIRFGGY*SGNGPIGTLDITKA Trigger: TGCCTTTGTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATCAGTACCCACCAAATCGAATCACAGACCTCCAGGCCACACTCGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS GCA 90 bp | TTCATCAGGGACAGGCTCTGCCTGAGGGGTGAACATTGCCACTTGTaGGATGTTGGATGGTCCCGAACTCAAATTGTTTTTGTCGACACT | + |
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Preference number: 5 (lower is better) Translates to: FIRDRLCLRGEHCHL*DVGWSRTQIVFVDT Trigger: AGTGTCGACAAAAACAATTTGAGTTCGGGACCATCCAACATCGCACAAGTGGCAATGTTCACCCCTCAGGCAGAGCCTGTCCCTGATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 90 bp | AATGAACTATGGACCCGCTGTCTTTCACCTCGTCAATACAGTCTTTaGCTGTGCTGTCCTCCCCATCACTCAACAGCAAGATCTCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: NELWTRCLSPRQYSL*LCCPPHHSTARSQS Trigger: GGACTGAGATCTTGCTGTTGAGTGATGGGGAGGACAGCACAGCCAAAGACTGTATTGACGAGGTGAAAGACAGCGGGTCCATAGTTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 90 bp | CTGGTATGTATGCAGCTCTGCTTGATGGGTGGCGTAAACTCCTCCTaGCAGAGTTTGTTCCTCCATCTGCACGGACTTTTAAGCTATACC | + |
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Preference number: 5 (lower is better) Translates to: LVCMQLCLMGGVNSS*QSLFLHLHGLLSYT Trigger: GGTATAGCTTAAAAGTCCGTGCAGATGGAGGAACAAACTCTGCCAGGAGGAGTTTACGCCACCCATCAAGCAGAGCTGCATACATACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 90 bp | GATCTCTTCCCCATCGAGTGTGGCCTGGAGGTCTGTGATTCGATTTaGTGGGTACTGATCAGGCAATGGACCAATTGGAACATTGGACAT | + |
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Preference number: 5 (lower is better) Translates to: DLFPIECGLEVCDSI*WVLIRQWTNWNIGH Trigger: ATGTCCAATGTTCCAATTGGTCCATTGCCTGATCAGTACCCACCAAATCGAATCACAGACCTCCAGGCCACACTCGATGGGGAAGAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS GCA 90 bp | AAGAGCTTGTTTCTCTCGATGTCACTGTTCATTTGGATCAGCTCATaGACAATAGTGGCCTGGCTACTAAAGTGCACCATCCCTACCCAG | + |
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Preference number: 5 (lower is better) Translates to: KSLFLSMSLFIWISS*TIVAWLLKCTIPTQ Trigger: CTGGGTAGGGATGGTGCACTTTAGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATGAACAGTGACATCGAGAGAAACAAGCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 90 bp | AGGCTCTGCCTGAGGGGTGAACATTGCCACTTGTGCGATGTTGGATaGTCCCGAACTCAAATTGTTTTTGTCGACACTTTCAATGGCAAT | + |
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Preference number: 5 (lower is better) Translates to: RLCLRGEHCHLCDVG*SRTQIVFVDTFNGN Trigger: ATTGCCATTGAAAGTGTCGACAAAAACAATTTGAGTTCGGGACCATCCAACATCGCACAAGTGGCAATGTTCACCCCTCAGGCAGAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS TCA 90 bp | TTCAGCCAGAGGCTATTATTCAGTATGGCACCCTTACTTTCAAGCTaGAGTGACTTCTGGGTGATATCAGTATTTTCTGAAGCCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FSQRLLFSMAPLLSS*SDFWVISVFSEARA Trigger: GGCCCTGGCTTCAGAAAATACTGATATCACCCAGAAGTCACTTCAGCTTGAAAGTAAGGGTGCCATACTGAATAATAGCCTCTGGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 90 bp | TCGATGTCACTGTTCATTTGGATCAGCTCATGCACAATAGTGGCCTaGCTACTAAAGTGCACCATCCCTACCCAGGACCTATTTTCAATT | + |
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Preference number: 5 (lower is better) Translates to: SMSLFIWISSCTIVA*LLKCTIPTQDLFSI Trigger: AATTGAAAATAGGTCCTGGGTAGGGATGGTGCACTTTAGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATGAACAGTGACATCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS GCA 90 bp | TTCATTTGGATCAGCTCATGCACAATAGTGGCCTGGCTACTAAAGTaGACCATCCCTACCCAGGACCTATTTTCAATTATCTGGCTTAGA | + |
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Preference number: 5 (lower is better) Translates to: FIWISSCTIVAWLLK*TIPTQDLFSIIWLR Trigger: TCTAAGCCAGATAATTGAAAATAGGTCCTGGGTAGGGATGGTGCACTTTAGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS TCA 90 bp | AAGATCTCAGTCCCATCTGTTTGGTATTCTCCATTTTTAAATACCTaGAATGCAGTCTTGATTCCAGAGCAGATGGACGTCCCTCCAATG | + |
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Preference number: 5 (lower is better) Translates to: KISVPSVWYSPFLNT*NAVLIPEQMDVPPM Trigger: CATTGGAGGGACGTCCATCTGCTCTGGAATCAAGACTGCATTTCAGGTATTTAAAAATGGAGAATACCAAACAGATGGGACTGAGATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS TCA 72 bp | GTGGACTTTCATCAGGGACAGGCTCTGCCTGAGGGGTaGACATTGCCACTTGTGCGATGTTGGATGGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: VDFHQGQALPEG*TLPLVRCWMVP Trigger: CGGGACCATCCAACATCGCACAAGTGGCAATGTTCACCCCTCAGGCAGAGCCTGTCCCTGATGAAAGTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS GCA 72 bp | CTCCATCTACTACCCAGCCTGGTATGTATGCAGCTCTaGTTGATGGGTGGCGTAAACTCCTCCTGGCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: LHLLPSLVCMQL*LMGGVNSSWQS Trigger: ACTCTGCCAGGAGGAGTTTACGCCACCCATCAAGCAGAGCTGCATACATACCAGGCTGGGTAGTAGATGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 72 bp | ACCCAGCCTGGTATGTATGCAGCTCTGCTTGATGGGTaGCGTAAACTCCTCCTGGCAGAGTTTGTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: TQPGMYAALLDG*RKLLLAEFVPP Trigger: TGGAGGAACAAACTCTGCCAGGAGGAGTTTACGCCACCCATCAAGCAGAGCTGCATACATACCAGGCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS TCA 72 bp | GATGAACGTGGACTTTCATCAGGGACAGGCTCTGCCTaGGGGGTGAACATTGCCACTTGTGCGATGTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: DERGLSSGTGSA*GVNIATCAMLD Trigger: ATCCAACATCGCACAAGTGGCAATGTTCACCCCTCAGGCAGAGCCTGTCCCTGATGAAAGTCCACGTTCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 72 bp | CCCATCGAGTGTGGCCTGGAGGTCTGTGATTCGATTTaGTGGGTACTGATCAGGCAATGGACCAATTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: PIECGLEVCDSI*WVLIRQWTNWN Trigger: GTTCCAATTGGTCCATTGCCTGATCAGTACCCACCAAATCGAATCACAGACCTCCAGGCCACACTCGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 72 bp | ATGGACCCGCTGTCTTTCACCTCGTCAATACAGTCTTaGGCTGTGCTGTCCTCCCCATCACTCAACAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: MDPLSFTSSIQS*AVLSSPSLNSK Trigger: CTTGCTGTTGAGTGATGGGGAGGACAGCACAGCCAAAGACTGTATTGACGAGGTGAAAGACAGCGGGTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 72 bp | CATCTACTACCCAGCCTGGTATGTATGCAGCTCTGCTaGATGGGTGGCGTAAACTCCTCCTGGCAGAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: HLLPSLVCMQLC*MGGVNSSWQSL Trigger: CAAACTCTGCCAGGAGGAGTTTACGCCACCCATCAAGCAGAGCTGCATACATACCAGGCTGGGTAGTAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 90 bp | GGTGGTTTGTGTTCCTTTGGGATCCCTGAGATAAATGGCAGGGGCTaGTTTGCTCCAGGTGACAAGAAAGAATGTGTCCCTTCCCACGGT | + |
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Preference number: 6 (lower is better) Translates to: GGLCSFGIPEINGRG*FAPGDKKECVPSHG Trigger: ACCGTGGGAAGGGACACATTCTTTCTTGTCACCTGGAGCAAACAAGCCCCTGCCATTTATCTCAGGGATCCCAAAGGAACACAAACCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 72 bp | GTGGGTACTGATCAGGCAATGGACCAATTGGAACATTaGACATCACAAAGGCACCTCCAGATGCTGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VGTDQAMDQLEH*TSQRHLQMLSC Trigger: GCAGGACAGCATCTGGAGGTGCCTTTGTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATCAGTACCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 90 bp | ATGCAGCTCTGCTTGATGGGTGGCGTAAACTCCTCCTGGCAGAGTTaGTTCCTCCATCTGCACGGACTTTTAAGCTATACCTGCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: MQLCLMGGVNSSWQS*FLHLHGLLSYTCHS Trigger: TGAATGGCAGGTATAGCTTAAAAGTCCGTGCAGATGGAGGAACAAACTCTGCCAGGAGGAGTTTACGCCACCCATCAAGCAGAGCTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS TCA 72 bp | GTGGCCTGGAGGTCTGTGATTCGATTTGGTGGGTACTaGTCAGGCAATGGACCAATTGGAACATTGGACATC | + |
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Preference number: 6 (lower is better) Translates to: VAWRSVIRFGGY*SGNGPIGTLDI Trigger: GATGTCCAATGTTCCAATTGGTCCATTGCCTGATCAGTACCCACCAAATCGAATCACAGACCTCCAGGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS GCA 72 bp | GACAGGCTCTGCCTGAGGGGTGAACATTGCCACTTGTaGGATGTTGGATGGTCCCGAACTCAAATTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: DRLCLRGEHCHL*DVGWSRTQIVF Trigger: AAAAACAATTTGAGTTCGGGACCATCCAACATCGCACAAGTGGCAATGTTCACCCCTCAGGCAGAGCCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 72 bp | CTGTTCATTTGGATCAGCTCATGCACAATAGTGGCCTaGCTACTAAAGTGCACCATCCCTACCCAGGACCTA | + |
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Preference number: 6 (lower is better) Translates to: LFIWISSCTIVA*LLKCTIPTQDL Trigger: TAGGTCCTGGGTAGGGATGGTGCACTTTAGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATGAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 72 bp | TGCTTGATGGGTGGCGTAAACTCCTCCTGGCAGAGTTaGTTCCTCCATCTGCACGGACTTTTAAGCTATACC | + |
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Preference number: 6 (lower is better) Translates to: CLMGGVNSSWQS*FLHLHGLLSYT Trigger: GGTATAGCTTAAAAGTCCGTGCAGATGGAGGAACAAACTCTGCCAGGAGGAGTTTACGCCACCCATCAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS TCA 72 bp | TTGTTACAGCTAAGTCAGCCGATGGTCCCAAGGCAATaGAATGAACTATGGACCCGCTGTCTTTCACCTCGT | + |
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Preference number: 6 (lower is better) Translates to: LLQLSQPMVPRQ*NELWTRCLSPR Trigger: ACGAGGTGAAAGACAGCGGGTCCATAGTTCATTTCATTGCCTTGGGACCATCGGCTGACTTAGCTGTAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS TCA 72 bp | TGGCACCCTTACTTTCAAGCTGAAGTGACTTCTGGGTaGTATCAGTATTTTCTGAAGCCAGGGCCCCGAAAG | + |
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Preference number: 6 (lower is better) Translates to: WHPYFQAEVTSG*YQYFLKPGPRK Trigger: CTTTCGGGGCCCTGGCTTCAGAAAATACTGATATCACCCAGAAGTCACTTCAGCTTGAAAGTAAGGGTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 72 bp | TCGATTTGGTGGGTACTGATCAGGCAATGGACCAATTaGAACATTGGACATCACAAAGGCACCTCCAGATGC | + |
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Preference number: 6 (lower is better) Translates to: SIWWVLIRQWTN*NIGHHKGTSRC Trigger: GCATCTGGAGGTGCCTTTGTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATCAGTACCCACCAAATCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 72 bp | ATCGAGTGTGGCCTGGAGGTCTGTGATTCGATTTGGTaGGTACTGATCAGGCAATGGACCAATTGGAACATT | + |
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Preference number: 6 (lower is better) Translates to: IECGLEVCDSIW*VLIRQWTNWNI Trigger: AATGTTCCAATTGGTCCATTGCCTGATCAGTACCCACCAAATCGAATCACAGACCTCCAGGCCACACTCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 72 bp | TGTTCCTTTGGGATCCCTGAGATAAATGGCAGGGGCTaGTTTGCTCCAGGTGACAAGAAAGAATGTGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: CSFGIPEINGRG*FAPGDKKECVP Trigger: AGGGACACATTCTTTCTTGTCACCTGGAGCAAACAAGCCCCTGCCATTTATCTCAGGGATCCCAAAGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 72 bp | GTCTGTGATTCGATTTGGTGGGTACTGATCAGGCAATaGACCAATTGGAACATTGGACATCACAAAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: VCDSIWWVLIRQ*TNWNIGHHKGT Trigger: GGTGCCTTTGTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATCAGTACCCACCAAATCGAATCACAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 72 bp | TTCGATTTGGTGGGTACTGATCAGGCAATGGACCAATaGGAACATTGGACATCACAAAGGCACCTCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: FDLVGTDQAMDQ*EHWTSQRHLQM Trigger: CATCTGGAGGTGCCTTTGTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATCAGTACCCACCAAATCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 90 bp | ATGGACGTCCCTCCAATGGCACTTGTAGGTAAAGTTTGCAAGAGCTaGTTTCTCTCGATGTCACTGTTCATTTGGATCAGCTCATGCACA | + |
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Preference number: 6 (lower is better) Translates to: MDVPPMALVGKVCKS*FLSMSLFIWISSCT Trigger: TGTGCATGAGCTGATCCAAATGAACAGTGACATCGAGAGAAACAAGCTCTTGCAAACTTTACCTACAAGTGCCATTGGAGGGACGTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS GCA 72 bp | TTTCTCTCGATGTCACTGTTCATTTGGATCAGCTCATaGACAATAGTGGCCTGGCTACTAAAGTGCACCATC | + |
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Preference number: 6 (lower is better) Translates to: FLSMSLFIWISS*TIVAWLLKCTI Trigger: GATGGTGCACTTTAGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATGAACAGTGACATCGAGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 72 bp | CAACAGTGTCATTCAGCCAGAGGCTATTATTCAGTATaGCACCCTTACTTTCAAGCTGAAGTGACTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: QQCHSARGYYSV*HPYFQAEVTSG Trigger: CCCAGAAGTCACTTCAGCTTGAAAGTAAGGGTGCCATACTGAATAATAGCCTCTGGCTGAATGACACTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 72 bp | AGTGTCCGTGTTTACCTTAGCATTTACAGAGATTGGTaGCACAGAAGAATTTGCTGCCCGAGAGGTTACTGT | + |
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Preference number: 6 (lower is better) Translates to: SVRVYLSIYRDW*HRRICCPRGYC Trigger: ACAGTAACCTCTCGGGCAGCAAATTCTTCTGTGCCACCAATCTCTGTAAATGCTAAGGTAAACACGGACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS GCA 72 bp | ATGGACGTCCCTCCAATGGCACTTGTAGGTAAAGTTTaGAAGAGCTTGTTTCTCTCGATGTCACTGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: MDVPPMALVGKV*KSLFLSMSLFI Trigger: AATGAACAGTGACATCGAGAGAAACAAGCTCTTGCAAACTTTACCTACAAGTGCCATTGGAGGGACGTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 72 bp | TCAGAACTGCTGATTACTTCCCAAGTGCTTCTCCATTaGCACTTTTCATTATGTAGAGTTGGAGCCTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: SELLITSQVLLH*HFSLCRVGASR Trigger: TCGAGAGGCTCCAACTCTACATAATGAAAAGTGCCAATGGAGAAGCACTTGGGAAGTAATCAGCAGTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 72 bp | CCTCCAATGGCACTTGTAGGTAAAGTTTGCAAGAGCTaGTTTCTCTCGATGTCACTGTTCATTTGGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: PPMALVGKVCKS*FLSMSLFIWIS Trigger: GCTGATCCAAATGAACAGTGACATCGAGAGAAACAAGCTCTTGCAAACTTTACCTACAAGTGCCATTGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 72 bp | CAAGCTTATGGTTTCCACCTGTTAAAATGCTCATGTTaGTTACAGCTAAGTCAGCCGATGGTCCCAAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: QAYGFHLLKCSC*LQLSQPMVPRQ Trigger: TTGCCTTGGGACCATCGGCTGACTTAGCTGTAACAAACATGAGCATTTTAACAGGTGGAAACCATAAGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 90 bp | GCTGTCCTCCCCATCACTCAACAGCAAGATCTCAGTCCCATCTGTTaGGTATTCTCCATTTTTAAATACCTGAAATGCAGTCTTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: AVLPITQQQDLSPIC*VFSIFKYLKCSLDS Trigger: GGAATCAAGACTGCATTTCAGGTATTTAAAAATGGAGAATACCAAACAGATGGGACTGAGATCTTGCTGTTGAGTGATGGGGAGGACAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 72 bp | GCCACTTGTGCGATGTTGGATGGTCCCGAACTCAAATaGTTTTTGTCGACACTTTCAATGGCAATGAATATG | + |
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Preference number: 6 (lower is better) Translates to: ATCAMLDGPELK*FLSTLSMAMNM Trigger: CATATTCATTGCCATTGAAAGTGTCGACAAAAACAATTTGAGTTCGGGACCATCCAACATCGCACAAGTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 72 bp | CATTTTGGAAACAAAGTCCATTGTGAAATTGGTGGTTaGTGTTCCTTTGGGATCCCTGAGATAAATGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HFGNKVHCEIGG*CSFGIPEINGR Trigger: CCTGCCATTTATCTCAGGGATCCCAAAGGAACACAAACCACCAATTTCACAATGGACTTTGTTTCCAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CCA 72 bp | AGTCCATTGTTCTGGGCTTCATCTGTAGCAAGCTTATaGTTTCCACCTGTTAAAATGCTCATGTTTGTTACA | + |
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Preference number: 6 (lower is better) Translates to: SPLFWASSVASL*FPPVKMLMFVT Trigger: TGTAACAAACATGAGCATTTTAACAGGTGGAAACCATAAGCTTGCTACAGATGAAGCCCAGAACAATGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS CAA 72 bp | CCCATCACTCAACAGCAAGATCTCAGTCCCATCTGTTaGGTATTCTCCATTTTTAAATACCTGAAATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: PITQQQDLSPIC*VFSIFKYLKCS Trigger: ACTGCATTTCAGGTATTTAAAAATGGAGAATACCAAACAGATGGGACTGAGATCTTGCTGTTGAGTGATGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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| CDS TCA 72 bp | AGGCTATTATTCAGTATGGCACCCTTACTTTCAAGCTaGAGTGACTTCTGGGTGATATCAGTATTTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: RLLFSMAPLLSS*SDFWVISVFSE Trigger: TTCAGAAAATACTGATATCACCCAGAAGTCACTTCAGCTTGAAAGTAAGGGTGCCATACTGAATAATAGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098549.4 |
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