Pregenerated sensors for CLCA4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068547Ensembl transcript IDs: ENSMUST00000029923.10, ENSMUST00000238960.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CACAAAGGCACCTCCAGATGCTGTCCTGCTGAAATCCTCCAAGACTaGCTGAGTAGCCTCAGTCGTTTCGGGTCTGGGTGGGTTCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: HKGTSRCCPAEILQD*LSSLSRFGSGWVPL Trigger: CAAGGGAACCCACCCAGACCCGAAACGACTGAGGCTACTCAGCCAGTCTTGGAGGATTTCAGCAGGACAGCATCTGGAGGTGCCTTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS GCA 90 bp | TTCATCAGGGTCAGGCTCTGCCTGAGGGGTGAACAGTGCCACTTGTaGGATGTTGGATGGTCCCGAACTCAAACTGCTTTTGTCGACACT | + |
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Preference number: 5 (lower is better) Translates to: FIRVRLCLRGEQCHL*DVGWSRTQTAFVDT Trigger: AGTGTCGACAAAAGCAGTTTGAGTTCGGGACCATCCAACATCGCACAAGTGGCACTGTTCACCCCTCAGGCAGAGCCTGACCCTGATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 90 bp | CCATCTACTACCCAGCCTGGTATGTATGCAGCTCTGCTTGATGGGTaGCGTAAACTCCTCCTCGCAGAATTTCTTCCTCCATCTGCACGG | + |
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Preference number: 5 (lower is better) Translates to: PSTTQPGMYAALLDG*RKLLLAEFLPPSAR Trigger: CCGTGCAGATGGAGGAAGAAATTCTGCGAGGAGGAGTTTACGCCACCCATCAAGCAGAGCTGCATACATACCAGGCTGGGTAGTAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 90 bp | GGGGCCGTCCATGTTAGACTGATCTCTTCCCCATCGAGTGTGGCCTaGAGGTCTGTGATTCGATTTGGTGGGTATACATCAGGCAATGGA | + |
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Preference number: 5 (lower is better) Translates to: GAVHVRLISSPSSVA*RSVIRFGGYTSGNG Trigger: TCCATTGCCTGATGTATACCCACCAAATCGAATCACAGACCTCCAGGCCACACTCGATGGGGAAGAGATCAGTCTAACATGGACGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 90 bp | ATCCTCCAAGACTGGCTGAGTAGCCTCAGTCGTTTCGGGTCTGGGTaGGTTCCCTTGAATTTCTCCATCTACTACCCAGCCTGGTATGTA | + |
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Preference number: 5 (lower is better) Translates to: ILQDWLSSLSRFGSG*VPLNFSIYYPAWYV Trigger: TACATACCAGGCTGGGTAGTAGATGGAGAAATTCAAGGGAACCCACCCAGACCCGAAACGACTGAGGCTACTCAGCCAGTCTTGGAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 90 bp | AGGCTCTGCCTGAGGGGTGAACAGTGCCACTTGTGCGATGTTGGATaGTCCCGAACTCAAACTGCTTTTGTCGACACTTTCAATGGCAAT | + |
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Preference number: 5 (lower is better) Translates to: RLCLRGEQCHLCDVG*SRTQTAFVDTFNGN Trigger: ATTGCCATTGAAAGTGTCGACAAAAGCAGTTTGAGTTCGGGACCATCCAACATCGCACAAGTGGCACTGTTCACCCCTCAGGCAGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 90 bp | GGCCTGGAGGTCTGTGATTCGATTTGGTGGGTATACATCAGGCAATaGACCAATTGGAACATTGGACATCACAAAGGCACCTCCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: GLEVCDSIWWVYIRQ*TNWNIGHHKGTSRC Trigger: GCATCTGGAGGTGCCTTTGTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATGTATACCCACCAAATCGAATCACAGACCTCCAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 90 bp | CTCTTCCCCATCGAGTGTGGCCTGGAGGTCTGTGATTCGATTTGGTaGGTATACATCAGGCAATGGACCAATTGGAACATTGGACATCAC | + |
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Preference number: 5 (lower is better) Translates to: LFPIECGLEVCDSIW*VYIRQWTNWNIGHH Trigger: GTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATGTATACCCACCAAATCGAATCACAGACCTCCAGGCCACACTCGATGGGGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 90 bp | GATCTCTTCCCCATCGAGTGTGGCCTGGAGGTCTGTGATTCGATTTaGTGGGTATACATCAGGCAATGGACCAATTGGAACATTGGACAT | + |
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Preference number: 5 (lower is better) Translates to: DLFPIECGLEVCDSI*WVYIRQWTNWNIGH Trigger: ATGTCCAATGTTCCAATTGGTCCATTGCCTGATGTATACCCACCAAATCGAATCACAGACCTCCAGGCCACACTCGATGGGGAAGAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS GCA 90 bp | AAGAGCTGGTTTCTCTCGATGTCACTGTTTATTTGGATCAGCTCATaGACAATAGTGGCCTGGCTACTAAAGTGCACCATCCCTACCCAG | + |
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Preference number: 5 (lower is better) Translates to: KSWFLSMSLFIWISS*TIVAWLLKCTIPTQ Trigger: CTGGGTAGGGATGGTGCACTTTAGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATAAACAGTGACATCGAGAGAAACCAGCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 90 bp | GTCTGTGATTCGATTTGGTGGGTATACATCAGGCAATGGACCAATTaGAACATTGGACATCACAAAGGCACCTCCAGATGCTGTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VCDSIWWVYIRQWTN*NIGHHKGTSRCCPA Trigger: AGCAGGACAGCATCTGGAGGTGCCTTTGTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATGTATACCCACCAAATCGAATCACAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 90 bp | GGTAAGGTTTGCAAGAGCTGGTTTCTCTCGATGTCACTGTTTATTTaGATCAGCTCATGCACAATAGTGGCCTGGCTACTAAAGTGCACC | + |
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Preference number: 5 (lower is better) Translates to: GKVCKSWFLSMSLFI*ISSCTIVAWLLKCT Trigger: GGTGCACTTTAGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATAAACAGTGACATCGAGAGAAACCAGCTCTTGCAAACCTTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 90 bp | TTTGGCTTCCAGGTTGTAAGTCCAAACACCCACCTGAGCTGTTCCTaGAATACTGAGATAGGCCATTTTGGAAGCAGAGTCCATTGTGAA | + |
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Preference number: 5 (lower is better) Translates to: FGFQVVSPNTHLSCS*NTEIGHFGSRVHCE Trigger: TTCACAATGGACTCTGCTTCCAAAATGGCCTATCTCAGTATTCCAGGAACAGCTCAGGTGGGTGTTTGGACTTACAACCTGGAAGCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS TCA 90 bp | TGCTCATGTTTGTTACAGCTAAGTCAGCCGATGGTCCCAAGGCAATaGAATGAACTATGGACCCGCTGTCTTTCACCTCATCAATACAGT | + |
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Preference number: 5 (lower is better) Translates to: CSCLLQLSQPMVPRQ*NELWTRCLSPHQYS Trigger: ACTGTATTGATGAGGTGAAAGACAGCGGGTCCATAGTTCATTTCATTGCCTTGGGACCATCGGCTGACTTAGCTGTAACAAACATGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 90 bp | GGGGAAAGTGTTAGTGTCCGTGTTTACCTTAGCATTTACAGTGATTaGTGGCACAGAAGAATTTGCTGCCCGAGAGGTTACTGTAATCGT | + |
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Preference number: 5 (lower is better) Translates to: GESVSVRVYLSIYSD*WHRRICCPRGYCNR Trigger: ACGATTACAGTAACCTCTCGGGCAGCAAATTCTTCTGTGCCACCAATCACTGTAAATGCTAAGGTAAACACGGACACTAACACTTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS TCA 90 bp | ATGTTTGTTACAGCTAAGTCAGCCGATGGTCCCAAGGCAATGAAATaGACTATGGACCCGCTGTCTTTCACCTCATCAATACAGTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: MFVTAKSADGPKAMK*TMDPLSFTSSIQSL Trigger: CAAAGACTGTATTGATGAGGTGAAAGACAGCGGGTCCATAGTTCATTTCATTGCCTTGGGACCATCGGCTGACTTAGCTGTAACAAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 90 bp | TCGATGTCACTGTTTATTTGGATCAGCTCATGCACAATAGTGGCCTaGCTACTAAAGTGCACCATCCCTACCCAGGACCTATTTTCAATT | + |
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Preference number: 5 (lower is better) Translates to: SMSLFIWISSCTIVA*LLKCTIPTQDLFSI Trigger: AATTGAAAATAGGTCCTGGGTAGGGATGGTGCACTTTAGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATAAACAGTGACATCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS TCA 90 bp | AAGATCTCAGTCCCATCTGTTTGGTATTCTCCATTTTTAAATACCTaGAATGCAGCCTTGATTCCAGAGCAGATGGACGTCCCTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: KISVPSVWYSPFLNT*NAALIPEQMDVPPL Trigger: CAATGGAGGGACGTCCATCTGCTCTGGAATCAAGGCTGCATTTCAGGTATTTAAAAATGGAGAATACCAAACAGATGGGACTGAGATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS GCA 90 bp | TTTATTTGGATCAGCTCATGCACAATAGTGGCCTGGCTACTAAAGTaGACCATCCCTACCCAGGACCTATTTTCAATTATCTGGCTTAGA | + |
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Preference number: 5 (lower is better) Translates to: FIWISSCTIVAWLLK*TIPTQDLFSIIWLR Trigger: TCTAAGCCAGATAATTGAAAATAGGTCCTGGGTAGGGATGGTGCACTTTAGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS TCA 72 bp | CCAGATGCTGTCCTGCTGAAATCCTCCAAGACTGGCTaGGTAGCCTCAGTCGTTTCGGGTCTGGGTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: PDAVLLKSSKTG*VASVVSGLGGF Trigger: GAACCCACCCAGACCCGAAACGACTGAGGCTACTCAGCCAGTCTTGGAGGATTTCAGCAGGACAGCATCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS TCA 72 bp | TTGGACTTTCATCAGGGTCAGGCTCTGCCTGAGGGGTaGACAGTGCCACTTGTGCGATGTTGGATGGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: LDFHQGQALPEG*TVPLVRCWMVP Trigger: CGGGACCATCCAACATCGCACAAGTGGCACTGTTCACCCCTCAGGCAGAGCCTGACCCTGATGAAAGTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | ACCTCCAGATGCTGTCCTGCTGAAATCCTCCAAGACTaGCTGAGTAGCCTCAGTCGTTTCGGGTCTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TSRCCPAEILQD*LSSLSRFGSGW Trigger: CCACCCAGACCCGAAACGACTGAGGCTACTCAGCCAGTCTTGGAGGATTTCAGCAGGACAGCATCTGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS TCA 72 bp | CATCATAATCATCTCCTGGGGCCGTCCATGTTAGACTaGTCTCTTCCCCATCGAGTGTGGCCTGGAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: HHNHLLGPSMLD*SLPHRVWPGGL Trigger: CAGACCTCCAGGCCACACTCGATGGGGAAGAGATCAGTCTAACATGGACGGCCCCAGGAGATGATTATGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS GCA 72 bp | GTCAGGCTCTGCCTGAGGGGTGAACAGTGCCACTTGTaGGATGTTGGATGGTCCCGAACTCAAACTGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: VRLCLRGEQCHL*DVGWSRTQTAF Trigger: AAAAGCAGTTTGAGTTCGGGACCATCCAACATCGCACAAGTGGCACTGTTCACCCCTCAGGCAGAGCCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 72 bp | ACCCCATCATCCTTGAAAGCATCAGCCCCTGCACCGTaGTCCAGAAGGACTAGCTCTTCTGTCTTCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: TPSSLKASAPAP*SRRTSSSVFPL Trigger: CAGTGGGAAGACAGAAGAGCTAGTCCTTCTGGACAACGGTGCAGGGGCTGATGCTTTCAAGGATGATGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS GCA 72 bp | CTCCATCTACTACCCAGCCTGGTATGTATGCAGCTCTaGTTGATGGGTGGCGTAAACTCCTCCTCGCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: LHLLPSLVCMQL*LMGGVNSSSQN Trigger: ATTCTGCGAGGAGGAGTTTACGCCACCCATCAAGCAGAGCTGCATACATACCAGGCTGGGTAGTAGATGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | ACCCAGCCTGGTATGTATGCAGCTCTGCTTGATGGGTaGCGTAAACTCCTCCTCGCAGAATTTCTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: TQPGMYAALLDG*RKLLLAEFLPP Trigger: TGGAGGAAGAAATTCTGCGAGGAGGAGTTTACGCCACCCATCAAGCAGAGCTGCATACATACCAGGCTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | CCCATCGAGTGTGGCCTGGAGGTCTGTGATTCGATTTaGTGGGTATACATCAGGCAATGGACCAATTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: PIECGLEVCDSI*WVYIRQWTNWN Trigger: GTTCCAATTGGTCCATTGCCTGATGTATACCCACCAAATCGAATCACAGACCTCCAGGCCACACTCGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 72 bp | GCAGCCTTGATTCCAGAGCAGATGGACGTCCCTCCATaGGCACTTGTAGGTAAGGTTTGCAAGAGCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: AALIPEQMDVPP*ALVGKVCKSWF Trigger: AAACCAGCTCTTGCAAACCTTACCTACAAGTGCCAATGGAGGGACGTCCATCTGCTCTGGAATCAAGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 72 bp | CATCTACTACCCAGCCTGGTATGTATGCAGCTCTGCTaGATGGGTGGCGTAAACTCCTCCTCGCAGAATTTC | + |
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Preference number: 6 (lower is better) Translates to: HLLPSLVCMQLC*MGGVNSSSQNF Trigger: GAAATTCTGCGAGGAGGAGTTTACGCCACCCATCAAGCAGAGCTGCATACATACCAGGCTGGGTAGTAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 90 bp | GGTGGTTTGTGTTCCTTTGGGATCCCTGAGATAAATGGCAGGGGCTaGTTTGCTCCAGGTGACAAGAAAGAATGTGTCCCTTCCCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: GGLCSFGIPEINGRG*FAPGDKKECVPSQG Trigger: ACCTTGGGAAGGGACACATTCTTTCTTGTCACCTGGAGCAAACAAGCCCCTGCCATTTATCTCAGGGATCCCAAAGGAACACAAACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS TCA 72 bp | TGGCACCCTTACTTTCAAGCTGAAGTGACTTCTGGGTaGTATCAGCATTTTCTGAAGCCAGGGCCCCGAAAG | + |
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Preference number: 6 (lower is better) Translates to: WHPYFQAEVTSG*YQHFLKPGPRK Trigger: CTTTCGGGGCCCTGGCTTCAGAAAATGCTGATATCACCCAGAAGTCACTTCAGCTTGAAAGTAAGGGTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | GTGGGTATACATCAGGCAATGGACCAATTGGAACATTaGACATCACAAAGGCACCTCCAGATGCTGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VGIHQAMDQLEH*TSQRHLQMLSC Trigger: GCAGGACAGCATCTGGAGGTGCCTTTGTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATGTATACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 72 bp | GTGGATGTATTCTGCTTTCTCTTCACACTGTGTGAATaGCCTGGTGTAGGGCTCATCTCTGCCCTCAACGGT | + |
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Preference number: 6 (lower is better) Translates to: VDVFCFLFTLCE*PGVGLISALNG Trigger: ACCGTTGAGGGCAGAGATGAGCCCTACACCAGGCAATTCACACAGTGTGAAGAGAAAGCAGAATACATCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 72 bp | ATGGACCCGCTGTCTTTCACCTCATCAATACAGTCTTaGGCTGTGCTGTCCTCACCATCACTCAACAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: MDPLSFTSSIQS*AVLSSPSLNSK Trigger: CTTGCTGTTGAGTGATGGTGAGGACAGCACAGCCAAAGACTGTATTGATGAGGTGAAAGACAGCGGGTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | CTGTTTATTTGGATCAGCTCATGCACAATAGTGGCCTaGCTACTAAAGTGCACCATCCCTACCCAGGACCTA | + |
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Preference number: 6 (lower is better) Translates to: LFIWISSCTIVA*LLKCTIPTQDL Trigger: TAGGTCCTGGGTAGGGATGGTGCACTTTAGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | CATGTTAGACTGATCTCTTCCCCATCGAGTGTGGCCTaGAGGTCTGTGATTCGATTTGGTGGGTATACATCA | + |
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Preference number: 6 (lower is better) Translates to: HVRLISSPSSVA*RSVIRFGGYTS Trigger: TGATGTATACCCACCAAATCGAATCACAGACCTCCAGGCCACACTCGATGGGGAAGAGATCAGTCTAACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 90 bp | ATTCGATTTGGTGGGTATACATCAGGCAATGGACCAATTGGAACATaGGACATCACAAAGGCACCTCCAGATGCTGTCCTGCTGAAATCC | + |
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Preference number: 6 (lower is better) Translates to: IRFGGYTSGNGPIGT*DITKAPPDAVLLKS Trigger: GGATTTCAGCAGGACAGCATCTGGAGGTGCCTTTGTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATGTATACCCACCAAATCGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS TCA 72 bp | TTGTTACAGCTAAGTCAGCCGATGGTCCCAAGGCAATaGAATGAACTATGGACCCGCTGTCTTTCACCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LLQLSQPMVPRQ*NELWTRCLSPH Trigger: ATGAGGTGAAAGACAGCGGGTCCATAGTTCATTTCATTGCCTTGGGACCATCGGCTGACTTAGCTGTAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | CACTTTAATGTCAGCATGCTTGTAACTCTCCTGTTTTaGCCTCCTGTACTGGGGACTGTCTTTCCAACTCTC | + |
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Preference number: 6 (lower is better) Translates to: HFNVSMLVTLLF*PPVLGTVFPTL Trigger: GAGAGTTGGAAAGACAGTCCCCAGTACAGGAGGCCAAAACAGGAGAGTTACAAGCATGCTGACATTAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | CAACAGTGTCATTCAGCCAGAGGCTATTGTTCAGTATaGCACCCTTACTTTCAAGCTGAAGTGACTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: QQCHSARGYCSV*HPYFQAEVTSG Trigger: CCCAGAAGTCACTTCAGCTTGAAAGTAAGGGTGCCATACTGAACAATAGCCTCTGGCTGAATGACACTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | ATCGAGTGTGGCCTGGAGGTCTGTGATTCGATTTGGTaGGTATACATCAGGCAATGGACCAATTGGAACATT | + |
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Preference number: 6 (lower is better) Translates to: IECGLEVCDSIW*VYIRQWTNWNI Trigger: AATGTTCCAATTGGTCCATTGCCTGATGTATACCCACCAAATCGAATCACAGACCTCCAGGCCACACTCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 90 bp | GAGATAGGCCATTTTGGAAGCAGAGTCCATTGTGAAATTGGTGGTTaGTGTTCCTTTGGGATCCCTGAGATAAATGGCAGGGGCTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: EIGHFGSRVHCEIGG*CSFGIPEINGRGLF Trigger: AAACAAGCCCCTGCCATTTATCTCAGGGATCCCAAAGGAACACAAACCACCAATTTCACAATGGACTCTGCTTCCAAAATGGCCTATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS GCA 72 bp | ATCAGCTCATGCACAATAGTGGCCTGGCTACTAAAGTaGACCATCCCTACCCAGGACCTATTTTCAATTATC | + |
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Preference number: 6 (lower is better) Translates to: ISSCTIVAWLLK*TIPTQDLFSII Trigger: GATAATTGAAAATAGGTCCTGGGTAGGGATGGTGCACTTTAGTAGCCAGGCCACTATTGTGCATGAGCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS GCA 72 bp | ATGGACGTCCCTCCATTGGCACTTGTAGGTAAGGTTTaGAAGAGCTGGTTTCTCTCGATGTCACTGTTTATT | + |
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Preference number: 6 (lower is better) Translates to: MDVPPLALVGKV*KSWFLSMSLFI Trigger: AATAAACAGTGACATCGAGAGAAACCAGCTCTTGCAAACCTTACCTACAAGTGCCAATGGAGGGACGTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | TGCAAGAGCTGGTTTCTCTCGATGTCACTGTTTATTTaGATCAGCTCATGCACAATAGTGGCCTGGCTACTA | + |
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Preference number: 6 (lower is better) Translates to: CKSWFLSMSLFI*ISSCTIVAWLL Trigger: TAGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATAAACAGTGACATCGAGAGAAACCAGCTCTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | CCTCCATTGGCACTTGTAGGTAAGGTTTGCAAGAGCTaGTTTCTCTCGATGTCACTGTTTATTTGGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: PPLALVGKVCKS*FLSMSLFIWIS Trigger: GCTGATCCAAATAAACAGTGACATCGAGAGAAACCAGCTCTTGCAAACCTTACCTACAAGTGCCAATGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | GTCTGTGATTCGATTTGGTGGGTATACATCAGGCAATaGACCAATTGGAACATTGGACATCACAAAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: VCDSIWWVYIRQ*TNWNIGHHKGT Trigger: GGTGCCTTTGTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATGTATACCCACCAAATCGAATCACAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 72 bp | TTGCAAGAGCTGGTTTCTCTCGATGTCACTGTTTATTaGGATCAGCTCATGCACAATAGTGGCCTGGCTACT | + |
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Preference number: 6 (lower is better) Translates to: LQELVSLDVTVY*DQLMHNSGLAT Trigger: AGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATAAACAGTGACATCGAGAGAAACCAGCTCTTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 72 bp | TTCGATTTGGTGGGTATACATCAGGCAATGGACCAATaGGAACATTGGACATCACAAAGGCACCTCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: FDLVGIHQAMDQ*EHWTSQRHLQM Trigger: CATCTGGAGGTGCCTTTGTGATGTCCAATGTTCCAATTGGTCCATTGCCTGATGTATACCCACCAAATCGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS GCA 72 bp | TTTCTCTCGATGTCACTGTTTATTTGGATCAGCTCATaGACAATAGTGGCCTGGCTACTAAAGTGCACCATC | + |
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Preference number: 6 (lower is better) Translates to: FLSMSLFIWISS*TIVAWLLKCTI Trigger: GATGGTGCACTTTAGTAGCCAGGCCACTATTGTGCATGAGCTGATCCAAATAAACAGTGACATCGAGAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 72 bp | CATTTTGGAAGCAGAGTCCATTGTGAAATTGGTGGTTaGTGTTCCTTTGGGATCCCTGAGATAAATGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HFGSRVHCEIGG*CSFGIPEINGR Trigger: CCTGCCATTTATCTCAGGGATCCCAAAGGAACACAAACCACCAATTTCACAATGGACTCTGCTTCCAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 90 bp | GCTGTCCTCACCATCACTCAACAGCAAGATCTCAGTCCCATCTGTTaGGTATTCTCCATTTTTAAATACCTGAAATGCAGCCTTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: AVLTITQQQDLSPIC*VFSIFKYLKCSLDS Trigger: GGAATCAAGGCTGCATTTCAGGTATTTAAAAATGGAGAATACCAAACAGATGGGACTGAGATCTTGCTGTTGAGTGATGGTGAGGACAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 90 bp | AGTGCCACTTGTGCGATGTTGGATGGTCCCGAACTCAAACTGCTTTaGTCGACACTTTCAATGGCAATGAATATGTACGTTGCATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SATCAMLDGPELKLL*STLSMAMNMYVAFS Trigger: AGAAAATGCAACGTACATATTCATTGCCATTGAAAGTGTCGACAAAAGCAGTTTGAGTTCGGGACCATCCAACATCGCACAAGTGGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CCA 72 bp | TTTAAAGGCAAAGGTTTCCTCGGAGTTGGCTTCTTTTaGTGTAAGGTTAGTTGTATCAACCCGAGGAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: FKGKGFLGVGFF*CKVSCINPRRV Trigger: AACTCTCCTCGGGTTGATACAACTAACCTTACACCAAAAGAAGCCAACTCCGAGGAAACCTTTGCCTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 90 bp | TCCCTACCCAGGACCTATTTTCAATTATCTGGCTTAGAAAGTATTTaGCTGCTTGGTTCATTCGATTCAGGCGATCATAAGAAGTCATAC | + |
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Preference number: 6 (lower is better) Translates to: SLPRTYFQLSGLESI*LLGSFDSGDHKKSY Trigger: GTATGACTTCTTATGATCGCCTGAATCGAATGAACCAAGCAGCAAAATACTTTCTAAGCCAGATAATTGAAAATAGGTCCTGGGTAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 72 bp | ACCATCACTCAACAGCAAGATCTCAGTCCCATCTGTTaGGTATTCTCCATTTTTAAATACCTGAAATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TITQQQDLSPIC*VFSIFKYLKCS Trigger: GCTGCATTTCAGGTATTTAAAAATGGAGAATACCAAACAGATGGGACTGAGATCTTGCTGTTGAGTGATGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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| CDS CAA 72 bp | AGGACCTATTTTCAATTATCTGGCTTAGAAAGTATTTaGCTGCTTGGTTCATTCGATTCAGGCGATCATAAG | + |
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Preference number: 6 (lower is better) Translates to: RTYFQLSGLESI*LLGSFDSGDHK Trigger: CTTATGATCGCCTGAATCGAATGAACCAAGCAGCAAAATACTTTCTAAGCCAGATAATTGAAAATAGGTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029923.10 ENSMUST00000238960.2 |
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