Pregenerated sensors for CLCA3A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028262Ensembl transcript IDs: ENSMUST00000029929.12, ENSMUST00000197013.2, ENSMUST00000199029.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTGAACTCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCACTaGGCCATCTCTTCAGCCCTACAAATTACTTTCATAGTCCCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: IELRTSGRAISALNH*AISSALQITFIVPL Trigger: AAGAGGGACTATGAAAGTAATTTGTAGGGCTGAAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCTGAGTTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| 3UTR TCA 90 bp | ATCTCAATTCTAATTGTACATCTTGCTGATGCTCTTAAGATCAAATaGTGGTCCCAGGACAGAACCAGACTCAGTGTGATGCCTGCAATT | + |
|
Preference number: 1 (lower is better) Translates to: ISILIVHLADALKIK*WSQDRTRLSVMPAI Trigger: AATTGCAGGCATCACACTGAGTCTGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAATTAGAATTGAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| 3UTR TCA 90 bp | CTCGGGATTTTCAACTTTGAATATGAACTTCTATATTACAAGTGTTaGCAGGCAGCCTTTGAGTGTAGTAAAGTCATTCTAAAGCAACAG | + |
|
Preference number: 1 (lower is better) Translates to: LGIFNFEYELLYYKC*QAAFECSKVILKQQ Trigger: CTGTTGCTTTAGAATGACTTTACTACACTCAAAGGCTGCCTGTCAACACTTGTAATATAGAAGTTCATATTCAAAGTTGAAAATCCCGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| 3UTR-3UTR TCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAACTATATTACAAGTGTTaGCAGGCAGCCTTTGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: TFLLVTLCTDKTTSANDKLYYKC*QAAFEC Trigger: ACACTCAAAGGCTGCCTGTCAACACTTGTAATATAG...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| 3UTR TCA 72 bp | CAGATGGTTATGAGCTACTATGTGGTTTCTGGGAATTaGACTCAGGACCTCTGGAAGAGCAATCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QMVMSYYVVSGN*TQDLWKSNQCS Trigger: AGAGCACTGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGAAACCACATAGTAGCTCATAACCATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| 3UTR TCA 72 bp | AGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCACTaGGCCATCTCTTCAGCCCTACAAATTACTTTCATA | + |
|
Preference number: 3 (lower is better) Translates to: RTSGRAISALNH*AISSALQITFI Trigger: TATGAAAGTAATTTGTAGGGCTGAAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| 3UTR CCA 72 bp | CGCATTACAGATGGTTATGAGCTACTATGTGGTTTCTaGGAATTGAACTCAGGACCTCTGGAAGAGCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: RITDGYELLCGF*ELNSGPLEEQS Trigger: TGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGAAACCACATAGTAGCTCATAACCATCTGTAATGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| 3UTR CCA 72 bp | ACAGTTGCTGTCTTCAGACACACCAGAAGAGGACATTaGATCGCATTACAGATGGTTATGAGCTACTATGTG | + |
|
Preference number: 3 (lower is better) Translates to: TVAVFRHTRRGH*IALQMVMSYYV Trigger: CACATAGTAGCTCATAACCATCTGTAATGCGATCCAATGTCCTCTTCTGGTGTGTCTGAAGACAGCAACTGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| 3UTR TCA 72 bp | CTAATTGTACATCTTGCTGATGCTCTTAAGATCAAATaGTGGTCCCAGGACAGAACCAGACTCAGTGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: LIVHLADALKIK*WSQDRTRLSVM Trigger: CATCACACTGAGTCTGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| 3UTR-3UTR CAA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAATGTGGTTTCTGGGAATaGAACTCAGGACCTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TFLLVTLCTDKTTSANDKCGFWE*NSGPLE Trigger: TTCCAGAGGTCCTGAGTTCAATTCCCAGAAACCACA...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| 3UTR-3UTR CAA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAGTTGACAGGCAGCCTTaGAGTGTAGTAAAGTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: TFLLVTLCTDKTTSANDKVDRQP*SVVKSF Trigger: GAATGACTTTACTACACTCAAAGGCTGCCTGTCAAC...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR GCA 90 bp | TCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTTCAGTCCAACTGCAGAGCCTaGTGGGAGACGCTGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEEQSVLLTTEPSLQSNCRA*WETLPL Trigger: AAGTGGCAGCGTCTCCCAGCAGGCTCTGCAGTTGGA...CTGAAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | TCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTTCAGGAGCCTTTCGTCCTCTaGCACACTGGGGTTAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEEQSVLLTTEPSLQEPFVL*HTGVNG Trigger: GCCATTAACCCCAGTGTGCCAGAGGACGAAAGGCTC...CTGAAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | TCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTTCAGTCTCCATGTTGCAGGTaGGGATCCGCAACTATGACG | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEEQSVLLTTEPSLQSPCCR*GSATMT Trigger: CGTCATAGTTGCGGATCCTCACCTGCAACATGGAGA...CTGAAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | TCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTTCAGCCCATAGCTCCAGGGTaGCTTGATGTCCATGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEEQSVLLTTEPSLQPIAPG*LDVHVQ Trigger: CTGAACATGGACATCAAGTCACCCTGGAGCTATGGG...CTGAAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCACCCAGAGCGATGGTGTaGATGATGGCACCGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPPRAMV*MMAPLR Trigger: TCGCAGCGGTGCCATCATCCACACCATCGCTCTGGG...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | TCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTTCAGAGACCCAGAGGATGCTaGCTCACTCTGATGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEEQSVLLTTEPSLQRPRGC*LTLMMY Trigger: ATACATCATCAGAGTGAGCCAGCATCCTCTGGGTCT...CTGAAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCACCCTCCTGTCATGTCTaGCAGAGTCTCCAGTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPPSCHV*QSLQFS Trigger: CGAGAACTGGAGACTCTGTCAGACATGACAGGAGGG...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR GCA 90 bp | TCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTTCAGGGCGGAGCACCTTGTTaGTTCTATAGTGTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEEQSVLLTTEPSLQGGAPC*FYSVLS Trigger: AGAAAGAACACTATAGAAGCAACAAGGTGCTCCGCC...CTGAAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCAAGCGGTAGCCAGGAGTaGTTCCATGGTGGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPSGSQE*FHGGTS Trigger: AGAAGTCCCACCATGGAACCACTCCTGGCTACCGCT...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCAATGGGAGGGGAATTCTaGAAGTCAGCAGACGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPMGGEF*KSADAL Trigger: CAAGGCGTCTGCTGACTTTCAGAATTCCCCTCCCAT...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCACAGCCTCCAGGTCTGTaGCTTTACTTGGTGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPQPPGL*LYLVGT Trigger: TGTTCCCACCAAGTAAAGTCACAGACCTGGAGGCTG...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR GCA 90 bp | TCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTTCAGTGTACTGTTTATCCATaGCCCTGCTCTGACATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEEQSVLLTTEPSLQCTVYP*PCSDIE Trigger: TTCAATGTCAGAGCAGGGGCATGGATAAACAGTACA...CTGAAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | TCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTTCAGCTTGGACATCTGGTCTaGGTGGATTCAGTACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEEQSVLLTTEPSLQLGHLV*VDSVQF Trigger: AAATTGTACTGAATCCACCCAGACCAGATGTCCAAG...CTGAAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAACCACCTTCTTGCCTGTaGTGCTGGCGGAGCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKPPSCL*CWRSTL Trigger: CAAGGTGCTCCGCCAGCATCACAGGCAAGAAGGTGG...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR GCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCACCAAGTACCTGTCTCTaGAGTGCCCGGTATTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPPSTCL*SARYLK Trigger: CTTCAAATACCGGGCACTGCAGAGACAGGTACTTGG...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR GCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCACATGGTGGGACTTCTTaGTCGAGTGGTCACTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPHGGTS*SSGHCH Trigger: ATGACAGTGACCACTCGAGCAAGAAGTCCCACCATG...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCACCTGCCTGGAGTCCATaGCAAATTGAAGTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPPAWSP*QIEVPP Trigger: TGGTGGAACTTCAATTTGCCATGGACTCCAGGCAGG...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCATCCAGACACAGTAAATaGCCCTCCAGAGGTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPSRHSK*PSRGYS Trigger: AGAGTAACCTCTGGAGGGTCATTTACTGTGTCTGGA...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAGCTTTGCTCTCCAACTaGAGAGCCTGCTGGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKALLSN*RACWET Trigger: CGTCTCCCAGCAGGCTCTGCAGTTGGAGAGCAAAGC...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCATCTATGGCTTCTTCTTaGACATCTGGTCTGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPSMASS*TSGLGG Trigger: TCCACCCAGACCAGATGTCCAAGAAGAAGCCATAGA...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| 3UTR CAA 72 bp | CACAGTTGCTGTCTTCAGACACACCAGAAGAGGACATaGGATCGCATTACAGATGGTTATGAGCTACTATGT | + |
|
Preference number: 4 (lower is better) Translates to: HSCCLQTHQKRT*DRITDGYELLC Trigger: ACATAGTAGCTCATAACCATCTGTAATGCGATCCAATGTCCTCTTCTGGTGTGTCTGAAGACAGCAACTGTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCAGTAGGAAGTTTGGAGTaGAGTGTATGTACTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPVGSLE*SVCTVL Trigger: GAGGACAGTACATACACTTCACTCCAAACTTCCTAC...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAAACTGCAGAGCCTGCTaGGAGACGCTGCCACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKNCRAC*ETLPLV Trigger: TACAAGTGGCAGCGTCTCCCAGCAGGCTCTGCAGTT...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAGGAGTGGTTCCATGGTaGGACTTCTTGCTCGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKGVVPW*DFLLEW Trigger: CCACTCGAGCAAGAAGTCCCACCATGGAACCACTCC...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCATACAGTTCTGCTGCTTaGTTCATTCGAATAAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPYSSAA*FIRIRR Trigger: CCGTCTTATTCGAATGAATCAAGCAGCAGAACTGTA...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAGGGGGAGGTTTGCGGTaGTCTTTTGGTAGTCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKGGGLR*SFGSHY Trigger: GTAGTGACTACCAAAAGATCACCGCAAACCTCCCCC...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAACTGGAGGTAATTGCCTaGAATCCTGCCTGGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKLEVIA*NPAWSP Trigger: TGGACTCCAGGCAGGATTTCAGGCAATTACCTCCAG...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAAGCTCCAGGGTGACTTaGTGTCCATGTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKSSRVT*CPCSAS Trigger: AGAAGCTGAACATGGACATCAAGTCACCCTGGAGCT...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR GCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCAAACTGTCATAGAGATTaGAGAAATATCAGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPNCHRD*RNISTQ Trigger: CTGGGTGCTGATATTTCTGCAATCTCTATGACAGTT...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCATTGAAGAATGATTTCTaGCTTTTGTACCGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPLKNDF*LLYRPG Trigger: ACCTGGACGGTACAAAAGCCAGAAATCATTCTTCAA...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCAATATGCTTATGTTCCTaGAATAAACTCTTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYILLMLLRSNDGPRTEPICLCS*NKLFLG Trigger: GCCAAGGAAGAGTTTATTTCAGGAACATAAGCATAT...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAGTCTGTGACTTTACTTaGTGGGAACACACGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKVCDFT*WEHTSM Trigger: CATGCTCGTGTGTTCCCACCAAGTAAAGTCACAGAC...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR TCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAGTCATTGTAATCAACTaGGACTTGGTACCCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKVIVIN*DLVPVM Trigger: CATCACGGGTACCAAGTCTCAGTTGATTACAATGAC...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAAATTGCCTGAAATCCTaGCTGGAGTCCATGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKNCLKS*LESMAN Trigger: ATTTGCCATGGACTCCAGGCAGGATTTCAGGCAATT...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAAAACTTGACAGCCTGTaGAATGTTGGAGACCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKKLDSL*NVGDLR Trigger: TCTGAGGTCTCCAACATTGCACAGGCTGTCAAGTTT...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAATTCTTCTTGGACATCTaGTCTGGGTGGATTCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKFFLDI*SGWIQY Trigger: GTACTGAATCCACCCAGACCAGATGTCCAAGAAGAA...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAACATCCCACGTGCTTCTaGGATTGCACATTTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKHPTCF*DCTFCF Trigger: AAAACAAAATGTGCAATCGCAGAAGCACGTGGGATG...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAGGTCTTCTTTGTCCATaGTTCCAGATTTATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKGLLCP*FQIYPA Trigger: TGCTGGATAAATCTGGAAGCATGGACAAAGAAGACC...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAACCAGCTTCATTGTATaGCTGGATTGCAATGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKTSFIV*LDCNVE Trigger: CTCTACATTGCAATCCAGGCATACAATGAAGCTGGT...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAATGTCTGTATTTTGTCTaGGATAAATGTACATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFLLVTLCTDKTTSANDKCLYFV*DKCTFG Trigger: CCCAAATGTACATTTATCCCAGACAAAATACAGACA...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS TCA 90 bp | TCTCCAGTTCTCGGGCAGCAGAAGGCCCCAGAGCGATGGTGTGGATaGTGGCACCGCTGCGAGAGACGGCCTCAAAGCAGGAACTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: SPVLGQQKAPERWCG*WHRCERRPQSRNLF Trigger: GAATAAGTTCCTGCTTTGAGGCCGTCTCTCGCAGCGGTGCCATCATCCACACCATCGCTCTGGGGCCTTCTGCTGCCCGAGAACTGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CCA 90 bp | TCAGCCTCCAGGTCTGTGACTTTACTTGGTGGGAACACACGAGCATaGTCGCCATCAGGGGGCGCTCCAGACACAGTAAATGACCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SASRSVTLLGGNTRA*SPSGGAPDTVNDPP Trigger: TGGAGGGTCATTTACTGTGTCTGGAGCGCCCCCTGATGGCGACCATGCTCGTGTGTTCCCACCAAGTAAAGTCACAGACCTGGAGGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000199029.2 |
||
| CDS TCA 90 bp | CACACGAGCATGGTCGCCATCAGGGGGCGCTCCAGACACAGTAAATaGCCCTCCAGAGGTTACTCTGTTGAAGTCCTCCACTGTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HTSMVAIRGRSRHSK*PSRGYSVEVLHCSF Trigger: GAAGCTACAGTGGAGGACTTCAACAGAGTAACCTCTGGAGGGTCATTTACTGTGTCTGGAGCGCCCCCTGATGGCGACCATGCTCGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000199029.2 |
||
| CDS GCA 90 bp | TCGTATCCATTGCTGTTGAGATGCACCATGGAGCTCTCTGTGTTCTaGAGGAGATGCAGGGTGAGGAACAGAAGGACCTGCAGCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SYPLLLRCTMELSVF*RRCRVRNRRTCSPG Trigger: GCCAGGGCTGCAGGTCCTTCTGTTCCTCACCCTGCATCTCCTGCAGAACACAGAGAGCTCCATGGTGCATCTCAACAGCAATGGATACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CCA 90 bp | AGGGTACTGGGCTGTGCTCTGACTCATGTGAGCGGTAGCCAGGAGTaGTTCCATGGTGGGACTTCTTGCTCGAGTGGTCACTGTCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: RVLGCALTHVSGSQE*FHGGTSCSSGHCHC Trigger: ACAATGACAGTGACCACTCGAGCAAGAAGTCCCACCATGGAACCACTCCTGGCTACCGCTCACATGAGTCAGAGCACAGCCCAGTACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS GCA 90 bp | GCCGACGGTACTGTCCACAGGTACTGTACTGTTTATCCATGCCCCTaGTCTGACATTGAAGGCTTTGCTCTCCAACTGCAGAGCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ADGTVHRYCTVYPCP*SDIEGFALQLQSLL Trigger: CAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCAATGTCAGAGCAGGGGCATGGATAAACAGTACAGTACCTGTGGACAGTACCGTCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS TCA 90 bp | GCTTACATGTTTGTTGGCATAGAAACGAAGCCCTCCTGTCATGTCTaGCAGAGTCTCCAGTTCTCGGGCAGCAGAAGGCCCCAGAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: AYMFVGIETKPSCHV*QSLQFSGSRRPQSD Trigger: ATCGCTCTGGGGCCTTCTGCTGCCCGAGAACTGGAGACTCTGTCAGACATGACAGGAGGGCTTCGTTTCTATGCCAACAAACATGTAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS GCA 90 bp | GGGTTAATGGCAATGACCACACCCTCGTATCCATTGCTGTTGAGATaGACCATGGAGCTCTCTGTGTTCTGCAGGAGATGCAGGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLMAMTTPSYPLLLR*TMELSVFCRRCRVR Trigger: CCTCACCCTGCATCTCCTGCAGAACACAGAGAGCTCCATGGTGCATCTCAACAGCAATGGATACGAGGGTGTGGTCATTGCCATTAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS GCA 90 bp | GTCGTTGCCGACGGTACTGTCCACAGGTACTGTACTGTTTATCCATaGCCCTGCTCTGACATTGAAGGCTTTGCTCTCCAACTGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVADGTVHRYCTVYP*PCSDIEGFALQLQS Trigger: GCTCTGCAGTTGGAGAGCAAAGCCTTCAATGTCAGAGCAGGGGCATGGATAAACAGTACAGTACCTGTGGACAGTACCGTCGGCAACGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS CCA 90 bp | CCTGCTCTGACATTGAAGGCTTTGCTCTCCAACTGCAGAGCCTGCTaGGAGACGCTGCCACTTGTAGATGAAATCCTACTGAAAGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PALTLKALLSNCRAC*ETLPLVDEILLKAS Trigger: CGACGCTTTCAGTAGGATTTCATCTACAAGTGGCAGCGTCTCCCAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCAATGTCAGAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS TCA 90 bp | TTTATCCAGCACCAAGCACACCACTCGCCTTCTGGACTTGAGCAATaGAAATGTAGGTGGAGGAGGCGCTTCTGTTCCTCTCATGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FIQHQAHHSPSGLEQ*KCRWRRRFCSSHGR Trigger: CCTCCCATGAGAGGAACAGAAGCGCCTCCTCCACCTACATTTTCATTGCTCAAGTCCAGAAGGCGAGTGGTGTGCTTGGTGCTGGATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCACACGCCGGCACGCCCTaGTCACACAGCTGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LYILLMLLRSNDGPRTEPHAGTP*SHSCLS Trigger: AGAGAGGCAGCTGTGTGACAAGGGCGTGCCGGCGTG...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS TCA 90 bp | ACTGGAGGTAATTGCCTGAAATCCTGCCTGGAGTCCATGGCAAATTaGAGTTCCACCAGTAGCCTGTTGGGGGAGGTTTGCGGTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGGNCLKSCLESMAN*SSTSSLLGEVCGDL Trigger: AAGATCACCGCAAACCTCCCCCAACAGGCTACTGGTGGAACTTCAATTTGCCATGGACTCCAGGCAGGATTTCAGGCAATTACCTCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS TCA 90 bp | ACAGTATCAGCACCTGCCCCATTGTCCCATAGCTCCAGGGTGACTTaGTGTCCATGTTCAGCTTCTATGATGGCTGTGACATTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TVSAPAPLSHSSRVT*CPCSASMMAVTLAP Trigger: AGGAGCCAATGTCACAGCCATCATAGAAGCTGAACATGGACATCAAGTCACCCTGGAGCTATGGGACAATGGGGCAGGTGCTGATACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000199029.2 |
||
| CDS GCA 90 bp | CTCGTGGACCACCTTCTTGCCTGTGATGCTGGCGGAGCACCTTGTTaGTTCTATAGTGTTCTTTCTAGAAATGTAGAAAGGCCGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVDHLLACDAGGAPC*FYSVLSRNVERPVH Trigger: GTGGACCGGCCTTTCTACATTTCTAGAAAGAACACTATAGAAGCAACAAGGTGCTCCGCCAGCATCACAGGCAAGAAGGTGGTCCACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS GCA 90 bp | ACTCATGTGAGCGGTAGCCAGGAGTGGTTCCATGGTGGGACTTCTTaGTCGAGTGGTCACTGTCATTGTAATCAACTGAGACTTGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: THVSGSQEWFHGGTS*SSGHCHCNQLRLGT Trigger: GGTACCAAGTCTCAGTTGATTACAATGACAGTGACCACTCGAGCAAGAAGTCCCACCATGGAACCACTCCTGGCTACCGCTCACATGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS CCA 90 bp | TCTATGATGGCTGTGACATTGGCTCCTAGAACAGGCAAAAACCCTTaGCTGACCCGTACATACACAATCATCCGGCTAGGGTACTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SMMAVTLAPRTGKNP*LTRTYTIIRLGYWA Trigger: AGCCCAGTACCCTAGCCGGATGATTGTGTATGTACGGGTCAGCCAAGGGTTTTTGCCTGTTCTAGGAGCCAATGTCACAGCCATCATAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS CCA 90 bp | AATATAATCACCTATAAACTCAGCCTCCAGGTCTGTGACTTTACTTaGTGGGAACACACGAGCATGGTCGCCATCAGGGGGCGCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NIITYKLSLQVCDFT*WEHTSMVAIRGRSR Trigger: TCTGGAGCGCCCCCTGATGGCGACCATGCTCGTGTGTTCCCACCAAGTAAAGTCACAGACCTGGAGGCTGAGTTTATAGGTGATTATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000199029.2 |
||
| CDS TCA 90 bp | ACGATCTCAGAACCGGAAGTGCTCTGGTCACTGGAGGTAATTGCCTaGAATCCTGCCTGGAGTCCATGGCAAATTGAAGTTCCACCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TISEPEVLWSLEVIA*NPAWSPWQIEVPPV Trigger: TACTGGTGGAACTTCAATTTGCCATGGACTCCAGGCAGGATTTCAGGCAATTACCTCCAGTGACCAGAGCACTTCCGGTTCTGAGATCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS TCA 90 bp | GCTCTCCAACTGCAGAGCCTGCTGGGAGACGCTGCCACTTGTAGATaGAATCCTACTGAAAGCGTCGATAAGGCTGCTTACATGTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ALQLQSLLGDAATCR*NPTESVDKAAYMFV Trigger: AACAAACATGTAAGCAGCCTTATCGACGCTTTCAGTAGGATTTCATCTACAAGTGGCAGCGTCTCCCAGCAGGCTCTGCAGTTGGAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS-3UTR CAA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCATCAGCACCTGCCCCATaGTCCCATAGCTCCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LYILLMLLRSNDGPRTEPSAPAP*SHSSRV Trigger: CACCCTGGAGCTATGGGACAATGGGGCAGGTGCTGA...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS TCA 90 bp | AGTACAATTTTACCTGCCCCATTGTCCCATAGCTCCAGGGTGACTTaGTGTCCATGTTCAGCTTCTATGATGGCTGTGACATTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STILPAPLSHSSRVT*CPCSASMMAVTLAP Trigger: AGGAGCCAATGTCACAGCCATCATAGAAGCTGAACATGGACATCAAGTCACCCTGGAGCTATGGGACAATGGGGCAGGTAAAATTGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197013.2 |
||
| CDS CCA 90 bp | TTGAGTTACCATTTCCTTTATGCTTGGGATGAGCCTTTCGTCCTCTaGCACACTGGGGTTAATGGCAATGACCACACCCTCGTATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LSYHFLYAWDEPFVL*HTGVNGNDHTLVSI Trigger: AATGGATACGAGGGTGTGGTCATTGCCATTAACCCCAGTGTGCCAGAGGACGAAAGGCTCATCCCAAGCATAAAGGAAATGGTAACTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCAGCCCCTGCTCTGACATaGAAGGCTTTGCTCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LYILLMLLRSNDGPRTEPAPALT*KALLSN Trigger: GTTGGAGAGCAAAGCCTTCAATGTCAGAGCAGGGGC...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCACTGACATTGAAGGCTTaGCTCTCCAACTGCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LYILLMLLRSNDGPRTEPLTLKA*LSNCRA Trigger: GGCTCTGCAGTTGGAGAGCAAAGCCTTCAATGTCAG...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCAACAGCCTGTGCAATGTaGGAGACCTCAGAGGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LYILLMLLRSNDGPRTEPTACAM*ETSEVR Trigger: TCTCACCTCTGAGGTCTCCAACATTGCACAGGCTGT...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | TCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCACTGAGCCATCTCTTCAGCGTACGATTCTCGTTTaGGCATTAAGTACTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: SGPLEEQSVLLTTEPSLQRTILV*ALSTQI Trigger: AATCTGAGTACTTAATGCCAAAACGAGAATCGTACG...CTGAAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS GCA 90 bp | GTTGGAGACCTCAGAGGTGAGACCAGCTTCATTGTATGCCTGGATTaGAATGTAGAGCTGGGTGTCATTTGCTATTTTAAAAGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGDLRGETSFIVCLD*NVELGVICYFKSFW Trigger: CCAGAAACTTTTAAAATAGCAAATGACACCCAGCTCTACATTGCAATCCAGGCATACAATGAAGCTGGTCTCACCTCTGAGGTCTCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS GCA 90 bp | CTGTGCAATGTTGGAGACCTCAGAGGTGAGACCAGCTTCATTGTATaGCTGGATTGCAATGTAGAGCTGGGTGTCATTTGCTATTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LCNVGDLRGETSFIV*LDCNVELGVICYFK Trigger: TTTAAAATAGCAAATGACACCCAGCTCTACATTGCAATCCAGGCATACAATGAAGCTGGTCTCACCTCTGAGGTCTCCAACATTGCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCAACTCGCCTTCTGGACTaGAGCAATGAAAATGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LYILLMLLRSNDGPRTEPTRLLD*SNENVG Trigger: ACCTACATTTTCATTGCTCAAGTCCAGAAGGCGAGT...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | TTGTACATCTTGCTGATGCTCTTAAGATCAAATGATGGTCCCAGGACAGAACCACAGGTAGGTAGAAGCTaGAGTTACCATTTCCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LYILLMLLRSNDGPRTEPQVGRS*SYHFLY Trigger: ATAAAGGAAATGGTAACTCAAGCTTCTACCTACCTG...TGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGATGTACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAAACAGGCAAAAACCCTaGGCTGACCCGTACATACAC | + |
|
Preference number: 5 (lower is better) Translates to: TFLLVTLCTDKTTSANDKNRQKP*ADPYIH Trigger: GTGTATGTACGGGTCAGCCAAGGGTTTTTGCCTGTT...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAATTAAGTACTCAGATTTaGACTTCCAGGTCATCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TFLLVTLCTDKTTSANDKLSTQI*TSRSSG Trigger: TCCCGATGACCTGGAAGTCAAAATCTGAGTACTTAA...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAATTGTTAAAATCTTCTaGGAGACCCAGAGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TFLLVTLCTDKTTSANDKIVKIF*ETQRML Trigger: CAGCATCCTCTGGGTCTCCAAGAAGATTTTAACAAT...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAATCTAGAGAAGTAAACTaGACAGCCTGTGCAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TFLLVTLCTDKTTSANDKSREVN*TACAML Trigger: CAACATTGCACAGGCTGTCAAGTTTACTTCTCTAGA...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAACCAGCTGTCTGTATTTaGTCTGGGATAAATGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: TFLLVTLCTDKTTSANDKPAVCI*SGINVH Trigger: ATGTACATTTATCCCAGACAAAATACAGACAGCTGG...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTGCTAGTCACTTTGTGTACTGATAAAACAACTTCAGCCAATGACAAAGGCCGTCCATGTAAGTaGAATATAATCACCTATAAA | + |
|
Preference number: 5 (lower is better) Translates to: TFLLVTLCTDKTTSANDKGRPCK*NIITYK Trigger: TTTATAGGTGATTATATTCAACTTACATGGACGGCC...TTTGTCATTGGCTGAAGTTGTTTTATCAGTACACAAAGTGACTAGCAAGAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS TCA 72 bp | CTCGGGCAGCAGAAGGCCCCAGAGCGATGGTGTGGATaGTGGCACCGCTGCGAGAGACGGCCTCAAAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGQQKAPERWCG*WHRCERRPQSR Trigger: CCTGCTTTGAGGCCGTCTCTCGCAGCGGTGCCATCATCCACACCATCGCTCTGGGGCCTTCTGCTGCCCGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS TCA 72 bp | TCACGCCGGCACGCCCTTGTCACACAGCTGCCTCTCTaGCACTCGTGGACCACCTTCTTGCCTGTGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRRHALVTQLPL*HSWTTFLPVML Trigger: CAGCATCACAGGCAAGAAGGTGGTCCACGAGTGTCAGAGAGGCAGCTGTGTGACAAGGGCGTGCCGGCGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CAA 72 bp | CATACAGCCGTGTCTTCGAGTCACGCCGGCACGCCCTaGTCACACAGCTGCCTCTCTGACACTCGTGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: HTAVSSSHAGTP*SHSCLSDTRGP Trigger: TGGTCCACGAGTGTCAGAGAGGCAGCTGTGTGACAAGGGCGTGCCGGCGTGACTCGAAGACACGGCTGTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CAA 90 bp | ATTTGGGTTCATACAGCCGTGTCTTCGAGTCACGCCGGCACGCCCTaGTCACACAGCTGCCTCTCTGACACTCGTGGACCACCTTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: IWVHTAVSSSHAGTP*SHSCLSDTRGPPSC Trigger: GCAAGAAGGTGGTCCACGAGTGTCAGAGAGGCAGCTGTGTGACAAGGGCGTGCCGGCGTGACTCGAAGACACGGCTGTATGAACCCAAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CCA 72 bp | GGCTGTGCTCTGACTCATGTGAGCGGTAGCCAGGAGTaGTTCCATGGTGGGACTTCTTGCTCGAGTGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GCALTHVSGSQE*FHGGTSCSSGH Trigger: GTGACCACTCGAGCAAGAAGTCCCACCATGGAACCACTCCTGGCTACCGCTCACATGAGTCAGAGCACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS TCA 72 bp | ATGGTCGCCATCAGGGGGCGCTCCAGACACAGTAAATaGCCCTCCAGAGGTTACTCTGTTGAAGTCCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: MVAIRGRSRHSK*PSRGYSVEVLH Trigger: GTGGAGGACTTCAACAGAGTAACCTCTGGAGGGTCATTTACTGTGTCTGGAGCGCCCCCTGATGGCGACCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000199029.2 |
||
| CDS GCA 72 bp | CCCAGAGGATGCTGGCTCACTCTGATGATGTATCTATaGGCTCTTCCCTTATCGAGAACCTTGCCAGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRGCWLTLMMYL*ALPLSRTLPGA Trigger: GGCCCCTGGCAAGGTTCTCGATAAGGGAAGAGCGCATAGATACATCATCAGAGTGAGCCAGCATCCTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CAA 72 bp | CTGTTTATCCATGCCCCTGCTCTGACATTGAAGGCTTaGCTCTCCAACTGCAGAGCCTGCTGGGAGACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LFIHAPALTLKA*LSNCRACWETL Trigger: CAGCGTCTCCCAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCAATGTCAGAGCAGGGGCATGGATAAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS CAA 90 bp | GTCCCCACACTGTCCATACTGAAGGGTGTAGGGGTCGTCTCCATGTaGCAGGTGAGGATCCGCAACTATGACGTCTGCTTTGTCGTACGA | + |
|
Preference number: 6 (lower is better) Translates to: VPTLSILKGVGVVSM*QVRIRNYDVCFVVR Trigger: TCGTACGACAAAGCAGACGTCATAGTTGCGGATCCTCACCTGCAACATGGAGACGACCCCTACACCCTTCAGTATGGACAGTGTGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CAA 90 bp | CTGTCCACAGGTACTGTACTGTTTATCCATGCCCCTGCTCTGACATaGAAGGCTTTGCTCTCCAACTGCAGAGCCTGCTGGGAGACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSTGTVLFIHAPALT*KALLSNCRACWETL Trigger: CAGCGTCTCCCAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCAATGTCAGAGCAGGGGCATGGATAAACAGTACAGTACCTGTGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS TCA 72 bp | GGAGGCGCTTCTGTTCCTCTCATGGGAGGGGAATTCTaGAAGTCAGCAGACGCCTTGATTACATCCCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: GGASVPLMGGEF*KSADALITSHV Trigger: CACGTGGGATGTAATCAAGGCGTCTGCTGACTTTCAGAATTCCCCTCCCATGAGAGGAACAGAAGCGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS TCA 72 bp | TTTGTTGGCATAGAAACGAAGCCCTCCTGTCATGTCTaGCAGAGTCTCCAGTTCTCGGGCAGCAGAAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FVGIETKPSCHV*QSLQFSGSRRP Trigger: GGGCCTTCTGCTGCCCGAGAACTGGAGACTCTGTCAGACATGACAGGAGGGCTTCGTTTCTATGCCAACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS GCA 72 bp | GGTACCCGTGATGCTGTAAGTCCAAGTACCTGTCTCTaGAGTGCCCGGTATTTGAAGTCGAGCAGACCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GTRDAVSPSTCL*SARYLKSSRPD Trigger: ATCCGGTCTGCTCGACTTCAAATACCGGGCACTGCAGAGACAGGTACTTGGACTTACAGCATCACGGGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS CCA 72 bp | AGGTCTGTGACTTTACTTGGTGGGAACACACGAGCATaGTCGCCATCAGGGGGCGCTCCAGACACAGTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: RSVTLLGGNTRA*SPSGGAPDTVN Trigger: ATTTACTGTGTCTGGAGCGCCCCCTGATGGCGACCATGCTCGTGTGTTCCCACCAAGTAAAGTCACAGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000199029.2 |
||
| CDS CAA 90 bp | GGTACTGTACTGTTTATCCATGCCCCTGCTCTGACATTGAAGGCTTaGCTCTCCAACTGCAGAGCCTGCTGGGAGACGCTGCCACTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GTVLFIHAPALTLKA*LSNCRACWETLPLV Trigger: TACAAGTGGCAGCGTCTCCCAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCAATGTCAGAGCAGGGGCATGGATAAACAGTACAGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS TCA 72 bp | CACCAAGCACACCACTCGCCTTCTGGACTTGAGCAATaGAAATGTAGGTGGAGGAGGCGCTTCTGTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HQAHHSPSGLEQ*KCRWRRRFCSS Trigger: AGAGGAACAGAAGCGCCTCCTCCACCTACATTTTCATTGCTCAAGTCCAGAAGGCGAGTGGTGTGCTTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS TCA 72 bp | CTGCAGAGCCTGCTGGGAGACGCTGCCACTTGTAGATaGAATCCTACTGAAAGCGTCGATAAGGCTGCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LQSLLGDAATCR*NPTESVDKAAY Trigger: GTAAGCAGCCTTATCGACGCTTTCAGTAGGATTTCATCTACAAGTGGCAGCGTCTCCCAGCAGGCTCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS TCA 72 bp | GCACCTGCCCCATTGTCCCATAGCTCCAGGGTGACTTaGTGTCCATGTTCAGCTTCTATGATGGCTGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: APAPLSHSSRVT*CPCSASMMAVT Trigger: TGTCACAGCCATCATAGAAGCTGAACATGGACATCAAGTCACCCTGGAGCTATGGGACAATGGGGCAGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000199029.2 |
||
| CDS CCA 72 bp | GCTGTGACATTGGCTCCTAGAACAGGCAAAAACCCTTaGCTGACCCGTACATACACAATCATCCGGCTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AVTLAPRTGKNP*LTRTYTIIRLG Trigger: CCCTAGCCGGATGATTGTGTATGTACGGGTCAGCCAAGGGTTTTTGCCTGTTCTAGGAGCCAATGTCACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS CAA 72 bp | CTGTCCATACTGAAGGGTGTAGGGGTCGTCTCCATGTaGCAGGTGAGGATCCGCAACTATGACGTCTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSILKGVGVVSM*QVRIRNYDVCF Trigger: AAAGCAGACGTCATAGTTGCGGATCCTCACCTGCAACATGGAGACGACCCCTACACCCTTCAGTATGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CAA 72 bp | GGTACTGTACTGTTTATCCATGCCCCTGCTCTGACATaGAAGGCTTTGCTCTCCAACTGCAGAGCCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTVLFIHAPALT*KALLSNCRACW Trigger: CCAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCAATGTCAGAGCAGGGGCATGGATAAACAGTACAGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS CAA 90 bp | TCTGGCACACTGGGGTTAATGGCAATGACCACACCCTCGTATCCATaGCTGTTGAGATGCACCATGGAGCTCTCTGTGTTCTGCAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGTLGLMAMTTPSYP*LLRCTMELSVFCRR Trigger: TCTCCTGCAGAACACAGAGAGCTCCATGGTGCATCTCAACAGCAATGGATACGAGGGTGTGGTCATTGCCATTAACCCCAGTGTGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CAA 90 bp | ATGGAGGCCCCAGCTGTCTGTATTTTGTCTGGGATAAATGTACATTaGGGTTCATACAGCCGTGTCTTCGAGTCACGCCGGCACGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: MEAPAVCILSGINVH*GSYSRVFESRRHAL Trigger: AAGGGCGTGCCGGCGTGACTCGAAGACACGGCTGTATGAACCCAAATGTACATTTATCCCAGACAAAATACAGACAGCTGGGGCCTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS TCA 72 bp | AATTGCCTGAAATCCTGCCTGGAGTCCATGGCAAATTaGAGTTCCACCAGTAGCCTGTTGGGGGAGGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: NCLKSCLESMAN*SSTSSLLGEVC Trigger: GCAAACCTCCCCCAACAGGCTACTGGTGGAACTTCAATTTGCCATGGACTCCAGGCAGGATTTCAGGCAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS GCA 72 bp | CTGACATTGAAGGCTTTGCTCTCCAACTGCAGAGCCTaGTGGGAGACGCTGCCACTTGTAGATGAAATCCTA | + |
|
Preference number: 6 (lower is better) Translates to: LTLKALLSNCRA*WETLPLVDEIL Trigger: TAGGATTTCATCTACAAGTGGCAGCGTCTCCCAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCAATGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS GCA 72 bp | AGCGGTAGCCAGGAGTGGTTCCATGGTGGGACTTCTTaGTCGAGTGGTCACTGTCATTGTAATCAACTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGSQEWFHGGTS*SSGHCHCNQLR Trigger: TCTCAGTTGATTACAATGACAGTGACCACTCGAGCAAGAAGTCCCACCATGGAACCACTCCTGGCTACCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS CCA 72 bp | CATTTCCTTTATGCTTGGGATGAGCCTTTCGTCCTCTaGCACACTGGGGTTAATGGCAATGACCACACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HFLYAWDEPFVL*HTGVNGNDHTL Trigger: GAGGGTGTGGTCATTGCCATTAACCCCAGTGTGCCAGAGGACGAAAGGCTCATCCCAAGCATAAAGGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CCA 72 bp | ACATTGAAGGCTTTGCTCTCCAACTGCAGAGCCTGCTaGGAGACGCTGCCACTTGTAGATGAAATCCTACTG | + |
|
Preference number: 6 (lower is better) Translates to: TLKALLSNCRAC*ETLPLVDEILL Trigger: CAGTAGGATTTCATCTACAAGTGGCAGCGTCTCCCAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS CAA 72 bp | CTGGGGTTAATGGCAATGACCACACCCTCGTATCCATaGCTGTTGAGATGCACCATGGAGCTCTCTGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGLMAMTTPSYP*LLRCTMELSVF Trigger: GAACACAGAGAGCTCCATGGTGCATCTCAACAGCAATGGATACGAGGGTGTGGTCATTGCCATTAACCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS TCA 72 bp | GAACCGGAAGTGCTCTGGTCACTGGAGGTAATTGCCTaGAATCCTGCCTGGAGTCCATGGCAAATTGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: EPEVLWSLEVIA*NPAWSPWQIEV Trigger: AACTTCAATTTGCCATGGACTCCAGGCAGGATTTCAGGCAATTACCTCCAGTGACCAGAGCACTTCCGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS TCA 72 bp | TTACCTGCCCCATTGTCCCATAGCTCCAGGGTGACTTaGTGTCCATGTTCAGCTTCTATGATGGCTGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LPAPLSHSSRVT*CPCSASMMAVT Trigger: TGTCACAGCCATCATAGAAGCTGAACATGGACATCAAGTCACCCTGGAGCTATGGGACAATGGGGCAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197013.2 |
||
| CDS GCA 72 bp | GACGGTACTGTCCACAGGTACTGTACTGTTTATCCATaGCCCTGCTCTGACATTGAAGGCTTTGCTCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: DGTVHRYCTVYP*PCSDIEGFALQ Trigger: TTGGAGAGCAAAGCCTTCAATGTCAGAGCAGGGGCATGGATAAACAGTACAGTACCTGTGGACAGTACCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 |
||
| CDS GCA 72 bp | GTTGGAGACCTCAGAGGTGAGACCAGCTTCATTGTATaGCTGGATTGCAATGTAGAGCTGGGTGTCATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VGDLRGETSFIV*LDCNVELGVIC Trigger: GCAAATGACACCCAGCTCTACATTGCAATCCAGGCATACAATGAAGCTGGTCTCACCTCTGAGGTCTCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CCA 72 bp | GTAGGTAGAAGCTTGAGTTACCATTTCCTTTATGCTTaGGATGAGCCTTTCGTCCTCTGGCACACTGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VGRSLSYHFLYA*DEPFVLWHTGV Trigger: AACCCCAGTGTGCCAGAGGACGAAAGGCTCATCCCAAGCATAAAGGAAATGGTAACTCAAGCTTCTACCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CCA 72 bp | CTCCACTGTAGCTTCTATGGCTTCTTCTTGGACATCTaGTCTGGGTGGATTCAGTACAATTTTACCTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LHCSFYGFFLDI*SGWIQYNFTCP Trigger: GGGGCAGGTAAAATTGTACTGAATCCACCCAGACCAGATGTCCAAGAAGAAGCCATAGAAGCTACAGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197013.2 |
||
| CDS CAA 72 bp | CCAGCTGTCTGTATTTTGTCTGGGATAAATGTACATTaGGGTTCATACAGCCGTGTCTTCGAGTCACGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PAVCILSGINVH*GSYSRVFESRR Trigger: CCGGCGTGACTCGAAGACACGGCTGTATGAACCCAAATGTACATTTATCCCAGACAAAATACAGACAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CAA 90 bp | ATATCAGCACCCAGTGCAGAGATACTATCTTCTAGAGAAGTAAACTaGACAGCCTGTGCAATGTTGGAGACCTCAGAGGTGAGACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ISAPSAEILSSREVN*TACAMLETSEVRPA Trigger: AGCTGGTCTCACCTCTGAGGTCTCCAACATTGCACAGGCTGTCAAGTTTACTTCTCTAGAAGATAGTATCTCTGCACTGGGTGCTGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CCA 72 bp | AGCTTCTATGGCTTCTTCTTGGACATCTGGTCTGGGTaGATTCAGTACAATTTTACCTGCCCCATTGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SFYGFFLDIWSG*IQYNFTCPIVP Trigger: TGGGACAATGGGGCAGGTAAAATTGTACTGAATCCACCCAGACCAGATGTCCAAGAAGAAGCCATAGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197013.2 |
||
| CDS CAA 72 bp | CTTATCGAGAACCTTGCCAGGGGCCGTCCATGTAAGTaGAATATAATCACCTATAAACTCAGCCTCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LIENLARGRPCK*NIITYKLSLQV Trigger: GACCTGGAGGCTGAGTTTATAGGTGATTATATTCAACTTACATGGACGGCCCCTGGCAAGGTTCTCGATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000199029.2 |
||
| CDS CAA 72 bp | CCCAGTGCAGAGATACTATCTTCTAGAGAAGTAAACTaGACAGCCTGTGCAATGTTGGAGACCTCAGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PSAEILSSREVN*TACAMLETSEV Trigger: CACCTCTGAGGTCTCCAACATTGCACAGGCTGTCAAGTTTACTTCTCTAGAAGATAGTATCTCTGCACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS GCA 72 bp | GTAGCATTGTTAAAATCTTCTTGGAGACCCAGAGGATaGTGGCTCACTCTGATGATGTATCTATGCGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VALLKSSWRPRG*WLTLMMYLCAL Trigger: AAGAGCGCATAGATACATCATCAGAGTGAGCCAGCATCCTCTGGGTCTCCAAGAAGATTTTAACAATGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS GCA 72 bp | CTCAGAGGTGAGACCAGCTTCATTGTATGCCTGGATTaGAATGTAGAGCTGGGTGTCATTTGCTATTTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LRGETSFIVCLD*NVELGVICYFK Trigger: TTTAAAATAGCAAATGACACCCAGCTCTACATTGCAATCCAGGCATACAATGAAGCTGGTCTCACCTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029929.12 |
||
| CDS CCA 72 bp | CTCCACTGTAGCTTCTATGGCTTCTTCTTGGACATCTaGTCTGGGTGGATTCAGTACAATTTTACCATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LHCSFYGFFLDI*SGWIQYNFTIF Trigger: GAAAATGGTAAAATTGTACTGAATCCACCCAGACCAGATGTCCAAGAAGAAGCCATAGAAGCTACAGTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029929.12 ENSMUST00000199029.2 |
||
| CDS CCA 72 bp | TTGAAGTCCTCCACTGTAGCTTCTATGGCTTCTTCTTaGACATCTGGTCTGGGTGGATTCAGTACAATTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LKSSTVASMASS*TSGLGGFSTIL Trigger: TAAAATTGTACTGAATCCACCCAGACCAGATGTCCAAGAAGAAGCCATAGAAGCTACAGTGGAGGACTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029929.12 ENSMUST00000197013.2 ENSMUST00000199029.2 |
||