Pregenerated sensors for CLCA3A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056025Ensembl transcript IDs: ENSMUST00000029932.14, ENSMUST00000059091.6
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGCCTCCAGGTCTGTGACTTTACTTGGTGGGAACACACGAGCGTaGTCGCCATCAGGGGGCGCTCCAGACACAGTAAACGACCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SASRSVTLLGGNTRA*SPSGGAPDTVNDPP Trigger: TGGAGGGTCGTTTACTGTGTCTGGAGCGCCCCCTGATGGCGACCACGCTCGTGTGTTCCCACCAAGTAAAGTCACAGACCTGGAGGCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CCA 90 bp | AGGGTACTGGGCTGTGCTCTGACTCATGTGAGCAGTAGCCAGGAGTaGTTCCATGGTGGGACTTCTTGCTCGAGTGGTCACTGTCATTGT | + |
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Preference number: 1 (lower is better) Translates to: RVLGCALTHVSSSQE*FHGGTSCSSGHCHC Trigger: ACAATGACAGTGACCACTCGAGCAAGAAGTCCCACCATGGAACCACTCCTGGCTACTGCTCACATGAGTCAGAGCACAGCCCAGTACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CCA 90 bp | AATATAATCACCTATAAACTCAGCCTCCAGGTCTGTGACTTTACTTaGTGGGAACACACGAGCGTGGTCGCCATCAGGGGGCGCTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: NIITYKLSLQVCDFT*WEHTSVVAIRGRSR Trigger: TCTGGAGCGCCCCCTGATGGCGACCACGCTCGTGTGTTCCCACCAAGTAAAGTCACAGACCTGGAGGCTGAGTTTATAGGTGATTATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR GCA 90 bp | ACTCATGTGAGCAGTAGCCAGGAGTGGTTCCATGGTGGGACTTCTTaGTCGAGTGGTCACTGTCATTGTAATCAACTGAGACTTGGTACC | + |
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Preference number: 1 (lower is better) Translates to: THVSSSQEWFHGGTS*SSGHCHCNQLRLGT Trigger: GGTACCAAGTCTCAGTTGATTACAATGACAGTGACCACTCGAGCAAGAAGTCCCACCATGGAACCACTCCTGGCTACTGCTCACATGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR GCA 90 bp | TTGGAGATCCAGAGGATGCTGGCTCATTCTGATGATGTATCTATGTaGTCTTCCATTGTCGAGAACCTTGCCAGGGGCCGTCCATGTAAG | + |
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Preference number: 1 (lower is better) Translates to: LEIQRMLAHSDDVSM*SSIVENLARGRPCK Trigger: CTTACATGGACGGCCCCTGGCAAGGTTCTCGACAATGGAAGAGCACATAGATACATCATCAGAATGAGCCAGCATCCTCTGGATCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR TCA 90 bp | ATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTaGGCCATCTCTTCAGCCCTACAAATTACTTTCATAGTCCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: IELRTSGRAVSALNH*AISSALQITFIVPL Trigger: AAGAGGGACTATGAAAGTAATTTGTAGGGCTGAAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| 3UTR TCA 90 bp | ATCTCAATTCTAACTGTACGTCTTGCTGATGCTCTTAAGATCAAATaGTGGTCCCAGGACAGAACCAGACTCAGTGTGATGCCTGCAATT | + |
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Preference number: 1 (lower is better) Translates to: ISILTVRLADALKIK*WSQDRTRLSVMPAI Trigger: AATTGCAGGCATCACACTGAGTCTGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGACGTACAGTTAGAATTGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CCA 90 bp | AGCCAGGTATATATAAAGACTTGTTCTTCTGTCTTAAGCTCAGTCTaGTTTTGTTTCTTTGTGCCTGGACACGCACTTTTAGGCTGTATC | + |
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Preference number: 1 (lower is better) Translates to: SQVYIKTCSSVLSSV*FCFFVPGHALLGCI Trigger: GATACAGCCTAAAAGTGCGTGTCCAGGCACAAAGAAACAAAACCAGACTGAGCTTAAGACAGAAGAACAAGTCTTTATATATACCTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR-3UTR GCA 90 bp | AGCGTGGTCGCCATCAGGGGGCGCTCCAGACACAGTAAACGACCCTCCAGAGGTTCCTTGGCTGACCCGTaGGTACACAATCATCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: SVVAIRGRSRHSKRPSRGSLADP*VHNHPA Trigger: AGCCGGATGATTGTGTACGCACGGGTCAGCCAAGGA...ACCTCTGGAGGGTCGTTTACTGTGTCTGGAGCGCCCCCTGATGGCGACCACGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CAA 90 bp | GGGGGCGCTCCAGACACAGTAAACGACCCTCCAGAGGTTACTCTGTaGAAGTCTTCCACTGTAGCTTCTATGGCTTCTTCTTGGACATCT | + |
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Preference number: 2 (lower is better) Translates to: GGAPDTVNDPPEVTL*KSSTVASMASSWTS Trigger: AGATGTCCAAGAAGAAGCCATAGAAGCTACAGTGGAAGACTTCAACAGAGTAACCTCTGGAGGGTCGTTTACTGTGTCTGGAGCGCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR-3UTR TCA 90 bp | GCTCCCAGAACAGGCAAAAATCCTTGGCTGACCCGTGCGTACACAATCATCCGGGTCATTGTAATCAACTaGGACTTGGTACCCGTGATG | + |
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Preference number: 2 (lower is better) Translates to: APRTGKNPWLTRAYTIIRVIVIN*DLVPVM Trigger: CATCACGGGTACCAAGTCTCAGTTGATTACAATGAC...CCGGATGATTGTGTACGCACGGGTCAGCCAAGGATTTTTGCCTGTTCTGGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CAA 90 bp | GATCCCATTACAGATGGTTATGAGCTACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACT | + |
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Preference number: 2 (lower is better) Translates to: DPITDGYELPCGCWE*NSGPLEEQSVLLTT Trigger: AGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTAGCTCATAACCATCTGTAATGGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTAAGCTCAGTCTGGTTTTGTTTCTTTGTGCCTGGACACGCACTTTTAGGCCCAGAGCTCCAAGGTaGCTTGATGTCCATGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: CLKLSLVLFLCAWTRTFRPRAPR*LDVHVQ Trigger: CTGAACATGGACATCAAGTCACCTTGGAGCTCTGGG...CCTAAAAGTGCGTGTCCAGGCACAAAGAAACAAAACCAGACTGAGCTTAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR-3UTR GCA 90 bp | GGATGCTGGCTCATTCTGATGATGTATCTATGTGCTCTTCCATTGTCGAGAACCCCAAGTACCTGTCTCTaGAGTGCCCGGTATTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GCWLILMMYLCALPLSRTPSTCL*SARYLK Trigger: CTTCAAATACCGGGCACTGCAGAGACAGGTACTTGG...GGTTCTCGACAATGGAAGAGCACATAGATACATCATCAGAATGAGCCAGCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR-3UTR CCA 90 bp | GTTACTCTGTTGAAGTCTTCCACTGTAGCTTCTATGGCTTCTTCTTGGACATCTGGAGTGGTTCCATGGTaGGACTTCTTGCTCGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: VTLLKSSTVASMASSWTSGVVPW*DFLLEW Trigger: CCACTCGAGCAAGAAGTCCCACCATGGAACCACTCC...AGATGTCCAAGAAGAAGCCATAGAAGCTACAGTGGAAGACTTCAACAGAGTAAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGCTCATTCTGATGATGTATCTATGTGCTCTTCCATTGTCGAGAACCTTGCATGGTGGGACTTCTTaGTCGAGTGGTCACTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: CWLILMMYLCALPLSRTLHGGTS*SSGHCH Trigger: ATGACAGTGACCACTCGAGCAAGAAGTCCCACCATG...CAAGGTTCTCGACAATGGAAGAGCACATAGATACATCATCAGAATGAGCCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR-3UTR CCA 90 bp | TTGGACATCTGGTCTGGGTGGATTCAGTACAATTTTACCATTTTCCACATAGCCAGCAGTAGCCAGGAGTaGTTCCATGGTGGGACTTCT | + |
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Preference number: 2 (lower is better) Translates to: LDIWSGWIQYNFTIFHIASSSQE*FHGGTS Trigger: AGAAGTCCCACCATGGAACCACTCCTGGCTACTGCT...GGCTATGTGGAAAATGGTAAAATTGTACTGAATCCACCCAGACCAGATGTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTAAGCTCAGTCTGGTTTTGTTTCTTTGTGCCTGGACACGCACTTTTAGGAGCTCCAAGGTGACTTaGTGTCCATGTTCAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: CLKLSLVLFLCAWTRTFRSSKVT*CPCSAS Trigger: AGAAGCTGAACATGGACATCAAGTCACCTTGGAGCT...CCTAAAAGTGCGTGTCCAGGCACAAAGAAACAAAACCAGACTGAGCTTAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CAA 90 bp | CCAGCTTCTTTAGGTATCAGACTGGAAGCATTCACTAAAGTAGCATaGTTAAAATCTTCTTGGAGATCCAGAGGATGCTGGCTCATTCTG | + |
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Preference number: 2 (lower is better) Translates to: PASLGIRLEAFTKVA*LKSSWRSRGCWLIL Trigger: CAGAATGAGCCAGCATCCTCTGGATCTCCAAGAAGATTTTAACAATGCTACTTTAGTGAATGCTTCCAGTCTGATACCTAAAGAAGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR-3UTR CCA 90 bp | CAAATTGTCATAGAGATTGCAGAAATATCATCACCCAGTGCAGAGATACTATCTTTCTTCTTGGACATCTaGTCTGGGTGGATTCAGTAC | + |
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Preference number: 2 (lower is better) Translates to: QIVIEIAEISSPSAEILSFFLDI*SGWIQY Trigger: GTACTGAATCCACCCAGACCAGATGTCCAAGAAGAA...AGATAGTATCTCTGCACTGGGTGATGATATTTCTGCAATCTCTATGACAATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR GCA 72 bp | GGCTCCCAGAACAGGCAAAAATCCTTGGCTGACCCGTaGGTACACAATCATCCGGCTAGGGTACTGGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: GSQNRQKSLADP*VHNHPARVLGC Trigger: ACAGCCCAGTACCCTAGCCGGATGATTGTGTACGCACGGGTCAGCCAAGGATTTTTGCCTGTTCTGGGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CCA 72 bp | GGCTGTGCTCTGACTCATGTGAGCAGTAGCCAGGAGTaGTTCCATGGTGGGACTTCTTGCTCGAGTGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: GCALTHVSSSQE*FHGGTSCSSGH Trigger: GTGACCACTCGAGCAAGAAGTCCCACCATGGAACCACTCCTGGCTACTGCTCACATGAGTCAGAGCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CCA 72 bp | AGGTCTGTGACTTTACTTGGTGGGAACACACGAGCGTaGTCGCCATCAGGGGGCGCTCCAGACACAGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: RSVTLLGGNTRA*SPSGGAPDTVN Trigger: GTTTACTGTGTCTGGAGCGCCCCCTGATGGCGACCACGCTCGTGTGTTCCCACCAAGTAAAGTCACAGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR GCA 72 bp | GGTACCCGTGATGCTGTAAGTCCAAGTACCTGTCTCTaGAGTGCCCGGTATTTGAAGTCTAGCAGACCGGAT | + |
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Preference number: 3 (lower is better) Translates to: GTRDAVSPSTCL*SARYLKSSRPD Trigger: ATCCGGTCTGCTAGACTTCAAATACCGGGCACTGCAGAGACAGGTACTTGGACTTACAGCATCACGGGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR GCA 72 bp | GTTGGAGACCTCAGAGGTGAGACTGGCTTCATTGTCTaGCTGGATTGCAATGTAGAGCTGGATGCCATTTGC | + |
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Preference number: 3 (lower is better) Translates to: VGDLRGETGFIV*LDCNVELDAIC Trigger: GCAAATGGCATCCAGCTCTACATTGCAATCCAGGCAGACAATGAAGCCAGTCTCACCTCTGAGGTCTCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR GCA 72 bp | AGCAGTAGCCAGGAGTGGTTCCATGGTGGGACTTCTTaGTCGAGTGGTCACTGTCATTGTAATCAACTGAGA | + |
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Preference number: 3 (lower is better) Translates to: SSSQEWFHGGTS*SSGHCHCNQLR Trigger: TCTCAGTTGATTACAATGACAGTGACCACTCGAGCAAGAAGTCCCACCATGGAACCACTCCTGGCTACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR-3UTR CAA 90 bp | TGCTGGCTCATTCTGATGATGTATCTATGTGCTCTTCCATTGTCGAGAACCTTGCCATGGTGGGACTTCTaGCTCGAGTGGTCACTGTCA | + |
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Preference number: 3 (lower is better) Translates to: CWLILMMYLCALPLSRTLPWWDF*LEWSLS Trigger: TGACAGTGACCACTCGAGCAAGAAGTCCCACCATGG...CAAGGTTCTCGACAATGGAAGAGCACATAGATACATCATCAGAATGAGCCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR-3UTR CAA 90 bp | GTTACTCTGTTGAAGTCTTCCACTGTAGCTTCTATGGCTTCTTCTTGGACATCTTGCAGTGCCCGGTATTaGAAGTCTAGCAGACCGGAT | + |
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Preference number: 3 (lower is better) Translates to: VTLLKSSTVASMASSWTSCSARY*KSSRPD Trigger: ATCCGGTCTGCTAGACTTCAAATACCGGGCACTGCA...AGATGTCCAAGAAGAAGCCATAGAAGCTACAGTGGAAGACTTCAACAGAGTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR TCA 72 bp | AGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTaGGCCATCTCTTCAGCCCTACAAATTACTTTCATA | + |
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Preference number: 3 (lower is better) Translates to: RTSGRAVSALNH*AISSALQITFI Trigger: TATGAAAGTAATTTGTAGGGCTGAAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| 3UTR TCA 72 bp | CTAACTGTACGTCTTGCTGATGCTCTTAAGATCAAATaGTGGTCCCAGGACAGAACCAGACTCAGTGTGATG | + |
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Preference number: 3 (lower is better) Translates to: LTVRLADALKIK*WSQDRTRLSVM Trigger: CATCACACTGAGTCTGGTTCTGTCCTGGGACCATCATTTGATCTTAAGAGCATCAGCAAGACGTACAGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR TCA 72 bp | TCAAATGATGGTCCCAGGACAGAACCAGACTCAGTGTaGTGCCTGCAATTCATAGGTAAAGACATTCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: SNDGPRTEPDSV*CLQFIGKDILA Trigger: AGCAAGAATGTCTTTACCTATGAATTGCAGGCATCACACTGAGTCTGGTTCTGTCCTGGGACCATCATTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CCA 72 bp | AGCTTCTATGGCTTCTTCTTGGACATCTGGTCTGGGTaGATTCAGTACAATTTTACCATTTTCCACATAGCC | + |
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Preference number: 3 (lower is better) Translates to: SFYGFFLDIWSG*IQYNFTIFHIA Trigger: GGCTATGTGGAAAATGGTAAAATTGTACTGAATCCACCCAGACCAGATGTCCAAGAAGAAGCCATAGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CCA 72 bp | TTCCACTGTAGCTTCTATGGCTTCTTCTTGGACATCTaGTCTGGGTGGATTCAGTACAATTTTACCATTTTC | + |
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Preference number: 3 (lower is better) Translates to: FHCSFYGFFLDI*SGWIQYNFTIF Trigger: GAAAATGGTAAAATTGTACTGAATCCACCCAGACCAGATGTCCAAGAAGAAGCCATAGAAGCTACAGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CCA 72 bp | TTGAAGTCTTCCACTGTAGCTTCTATGGCTTCTTCTTaGACATCTGGTCTGGGTGGATTCAGTACAATTTTA | + |
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Preference number: 3 (lower is better) Translates to: LKSSTVASMASS*TSGLGGFSTIL Trigger: TAAAATTGTACTGAATCCACCCAGACCAGATGTCCAAGAAGAAGCCATAGAAGCTACAGTGGAAGACTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CCA 72 bp | TATATAAAGACTTGTTCTTCTGTCTTAAGCTCAGTCTaGTTTTGTTTCTTTGTGCCTGGACACGCACTTTTA | + |
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Preference number: 3 (lower is better) Translates to: YIKTCSSVLSSV*FCFFVPGHALL Trigger: TAAAAGTGCGTGTCCAGGCACAAAGAAACAAAACCAGACTGAGCTTAAGACAGAAGAACAAGTCTTTATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR TCA 90 bp | AGCGTGGTCGCCATCAGGGGGCGCTCCAGACACAGTAAACGACCCTCCAGAGGTATGGGAGGGGCATTCTaGAAGTCAGCAGACGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SVVAIRGRSRHSKRPSRGMGGAF*KSADVL Trigger: CAAGACGTCTGCTGACTTTCAGAATGCCCCTCCCAT...ACCTCTGGAGGGTCGTTTACTGTGTCTGGAGCGCCCCCTGATGGCGACCACGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CCA 90 bp | ACGAGCGTGGTCGCCATCAGGGGGCGCTCCAGACACAGTAAACGACCCTCCAGACTTCTGTTCCTCTCATaGGAGGGGCATTCTGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: TSVVAIRGRSRHSKRPSRLLFLS*EGHSES Trigger: ACTTTCAGAATGCCCCTCCCATGAGAGGAACAGAAG...TCTGGAGGGTCGTTTACTGTGTCTGGAGCGCCCCCTGATGGCGACCACGCTCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR TCA 90 bp | GTACTGGGCTGTGCTCTGACTCATGTGAGCAGTAGCCAGGAGTGGTTCCATGGTCCTCTCTCACAGTTGTaGACCACATTGGTGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: VLGCALTHVSSSQEWFHGPLSQL*TTLVPV Trigger: CACTGGCACCAATGTGGTTCACAACTGTGAGAGAGG...ACCATGGAACCACTCCTGGCTACTGCTCACATGAGTCAGAGCACAGCCCAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR GCA 90 bp | CGAGCGTGGTCGCCATCAGGGGGCGCTCCAGACACAGTAAACGACCCTCCAGAGGGTGGAACACCTTGTTaGTTCTATAGTGTTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: RAWSPSGGAPDTVNDPPEGGTPC*FYSVLS Trigger: AGAAAGAACACTATAGAAGCAACAAGGTGTTCCACC...CTCTGGAGGGTCGTTTACTGTGTCTGGAGCGCCCCCTGATGGCGACCACGCTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR TCA 90 bp | GTACTGGGCTGTGCTCTGACTCATGTGAGCAGTAGCCAGGAGTGGTTCCATGGTTCTGGACTTGAGCAGTaGAAATGTAGGTGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VLGCALTHVSSSQEWFHGSGLEQ*KCRWRR Trigger: CCTCCTCCACCTACATTTTCACTGCTCAAGTCCAGA...ACCATGGAACCACTCCTGGCTACTGCTCACATGAGTCAGAGCACAGCCCAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR GCA 90 bp | CGAGCGTGGTCGCCATCAGGGGGCGCTCCAGACACAGTAAACGACCCTCCAGAGACAGAATTAAGGTTTTaGATGAACATTATGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RAWSPSGGAPDTVNDPPETELRF*MNIMEA Trigger: GGCCTCCATAATGTTCATGCAAAACCTTAATTCTGT...CTCTGGAGGGTCGTTTACTGTGTCTGGAGCGCCCCCTGATGGCGACCACGCTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR TCA 90 bp | TGCTGGCTCATTCTGATGATGTATCTATGTGCTCTTCCATTGTCGAGAACCTTGCCACATTGGTGCCAGTaGTCCTGGTGGAACACCTTG | + |
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Preference number: 4 (lower is better) Translates to: CWLILMMYLCALPLSRTLPHWCQ*SWWNTL Trigger: CAAGGTGTTCCACCAGGATCACTGGCACCAATGTGG...CAAGGTTCTCGACAATGGAAGAGCACATAGATACATCATCAGAATGAGCCAGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR TCA 90 bp | TTGGACATCTGGTCTGGGTGGATTCAGTACAATTTTACCATTTTCCACATAGCCTCCATGCCCCTGCTCTaGCATCGAAGGCTTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LDIWSGWIQYNFTIFHIASMPLL*HRRLCS Trigger: AGAGCAAAGCCTTCGATGTCAGAGCAGGGGCATGGA...GGCTATGTGGAAAATGGTAAAATTGTACTGAATCCACCCAGACCAGATGTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| 3UTR CAA 72 bp | CCAGACACAGTAAACGACCCTCCAGAGGTTACTCTGTaGAAGTCTTCCACTGTAGCTTCTATGGCTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PDTVNDPPEVTL*KSSTVASMASS Trigger: AGAAGAAGCCATAGAAGCTACAGTGGAAGACTTCAACAGAGTAACCTCTGGAGGGTCGTTTACTGTGTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CCA 90 bp | CAAATTGTCATAGAGATTGCAGAAATATCATCACCCAGTGCAGAGATACTATCTCCACCAGAAGCCTGTTaGGGGAGGTTTGCGGTGATC | + |
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Preference number: 4 (lower is better) Translates to: QIVIEIAEISSPSAEILSPPEAC*GRFAVI Trigger: GATCACCGCAAACCTCCCCCAACAGGCTTCTGGTGG...AGATAGTATCTCTGCACTGGGTGATGATATTTCTGCAATCTCTATGACAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR GCA 90 bp | CAAATTGTCATAGAGATTGCAGAAATATCATCACCCAGTGCAGAGATACTATCTGTTTATCCATGCCCCTaGTCTGACATCGAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: QIVIEIAEISSPSAEILSVYPCP*SDIEGF Trigger: AAAGCCTTCGATGTCAGAGCAGGGGCATGGATAAAC...AGATAGTATCTCTGCACTGGGTGATGATATTTCTGCAATCTCTATGACAATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CCA 90 bp | TTGGACATCTGGTCTGGGTGGATTCAGTACAATTTTACCATTTTCCACATAGCCCGTCTGTATTTTGTCTaGGATAAATGTACATTTGGG | + |
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Preference number: 4 (lower is better) Translates to: LDIWSGWIQYNFTIFHIARLYFV*DKCTFG Trigger: CCCAAATGTACATTTATCCCAGACAAAATACAGACG...GGCTATGTGGAAAATGGTAAAATTGTACTGAATCCACCCAGACCAGATGTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS TCA 90 bp | TCTCCAGTTCTCGGGCAGCCGAAGGCCCCAGAGCGATGGTGTGGATaGTGGCACCGCTGCGAGAGACGGCCTCAAAGCAGGAACGTATTC | + |
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Preference number: 5 (lower is better) Translates to: SPVLGQPKAPERWCG*WHRCERRPQSRNVF Trigger: GAATACGTTCCTGCTTTGAGGCCGTCTCTCGCAGCGGTGCCATCATCCACACCATCGCTCTGGGGCCTTCGGCTGCCCGAGAACTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS GCA 90 bp | GCCGACGGTACTGTCCAGAGGTACTGTACCGTTTATCCATGCCCCTaGTCTGACATCGAAGGCTTTGCTCTCCAACTGCAGAGCCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: ADGTVQRYCTVYPCP*SDIEGFALQLQSLL Trigger: CAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCGATGTCAGAGCAGGGGCATGGATAAACGGTACAGTACCTCTGGACAGTACCGTCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059091.6 |
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| CDS TCA 90 bp | TCACGCCGGCACGCCCTTGTGACACAGTTGCCTCTCTCACAGTTGTaGACCACATTGGTGCCAGTGATCCTGGTGGAACACCTTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: SRRHALVTQLPLSQL*TTLVPVILVEHLVA Trigger: AGCAACAAGGTGTTCCACCAGGATCACTGGCACCAATGTGGTTCACAACTGTGAGAGAGGCAACTGTGTCACAAGGGCGTGCCGGCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS TCA 90 bp | CGGTACTGTCCAGAGGTACTGTACCGTTTATCCATGCCCCTGCTCTaGCATCGAAGGCTTTGCTCTCCAACTGCAGAGCCTGCTGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: RYCPEVLYRLSMPLL*HRRLCSPTAEPAGR Trigger: TCTCCCAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCGATGTCAGAGCAGGGGCATGGATAAACGGTACAGTACCTCTGGACAGTACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059091.6 |
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| CDS GCA 90 bp | GTCGTTGCCGACGGTACTGTCCAGAGGTACTGTACCGTTTATCCATaGCCCTGCTCTGACATCGAAGGCTTTGCTCTCCAACTGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: VVADGTVQRYCTVYP*PCSDIEGFALQLQS Trigger: GCTCTGCAGTTGGAGAGCAAAGCCTTCGATGTCAGAGCAGGGGCATGGATAAACGGTACAGTACCTCTGGACAGTACCGTCGGCAACGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059091.6 |
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| CDS-3UTR CAA 90 bp | AGCGTGGTCGCCATCAGGGGGCGCTCCAGACACAGTAAACGACCCTCCAGAGGTCACGTGCTTCTGCGATaGCACATTTTGTTTTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: SVVAIRGRSRHSKRPSRGHVLLR*HILFCR Trigger: CCTACAAAACAAAATGTGCAATCGCAGAAGCACGTG...ACCTCTGGAGGGTCGTTTACTGTGTCTGGAGCGCCCCCTGATGGCGACCACGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CAA 90 bp | TTGGCTGACCCGTGCGTACACAATCATCCGGCTAGGGTACTGGGCTGTGCTCTGGGAGTCCATGGCAAATaGAAGTTCCACCAGAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: LADPCVHNHPARVLGCALGVHGK*KFHQKP Trigger: AGGCTTCTGGTGGAACTTCAATTTGCCATGGACTCC...CAGAGCACAGCCCAGTACCCTAGCCGGATGATTGTGTACGCACGGGTCAGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CAA 90 bp | GTACTGGGCTGTGCTCTGACTCATGTGAGCAGTAGCCAGGAGTGGTTCCATGGTTCGTATCCATTGCTGTaGAGATGCACCATGGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: VLGCALTHVSSSQEWFHGSYPLL*RCTMEL Trigger: GAGCTCCATGGTGCATCTCAACAGCAATGGATACGA...ACCATGGAACCACTCCTGGCTACTGCTCACATGAGTCAGAGCACAGCCCAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CAA 90 bp | TTGGCTGACCCGTGCGTACACAATCATCCGGCTAGGGTACTGGGCTGTGCTCTGGAAATAAACTCTTCCTaGGCTGGCTTCAAACAGGTA | + |
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Preference number: 5 (lower is better) Translates to: LADPCVHNHPARVLGCALEINSS*AGFKQV Trigger: TACCTGTTTGAAGCCAGCCAAGGAAGAGTTTATTTC...CAGAGCACAGCCCAGTACCCTAGCCGGATGATTGTGTACGCACGGGTCAGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS TCA 90 bp | ACTGGAGGTAATTGCCTGAAATCCTGCCTGGAGTCCATGGCAAATTaGAGTTCCACCAGAAGCCTGTTGGGGGAGGTTTGCGGTGATCTT | + |
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Preference number: 5 (lower is better) Translates to: TGGNCLKSCLESMAN*SSTRSLLGEVCGDL Trigger: AAGATCACCGCAAACCTCCCCCAACAGGCTTCTGGTGGAACTTCAATTTGCCATGGACTCCAGGCAGGATTTCAGGCAATTACCTCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS GCA 90 bp | TTTATCCATGCCCCTGCTCTGACATCGAAGGCTTTGCTCTCCAACTaGAGAGCCTGCTGGGAGACGCTGCCACTTGTAGATGAAATTCTA | + |
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Preference number: 5 (lower is better) Translates to: FIHAPALTSKALLSN*RACWETLPLVDEIL Trigger: TAGAATTTCATCTACAAGTGGCAGCGTCTCCCAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCGATGTCAGAGCAGGGGCATGGATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059091.6 |
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| CDS TCA 90 bp | ACGATCTCAGAACCGGAAGTGCTCTGGTCACTGGAGGTAATTGCCTaGAATCCTGCCTGGAGTCCATGGCAAATTGAAGTTCCACCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TISEPEVLWSLEVIA*NPAWSPWQIEVPPE Trigger: TTCTGGTGGAACTTCAATTTGCCATGGACTCCAGGCAGGATTTCAGGCAATTACCTCCAGTGACCAGAGCACTTCCGGTTCTGAGATCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS-3UTR CAA 90 bp | AGACTTGGTACCCGTGATGCTGTAAGTCCAAGTACCTGTCTCTGCAGTGCCCGGCAGGTAGGTAGAGGCTaGAGTTACCATTTCCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: RLGTRDAVSPSTCLCSARQVGRG*SYHFLY Trigger: ATAAAGGAAATGGTAACTCAAGCCTCTACCTACCTG...CCGGGCACTGCAGAGACAGGTACTTGGACTTACAGCATCACGGGTACCAAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CAA 90 bp | AGACTTGGTACCCGTGATGCTGTAAGTCCAAGTACCTGTCTCTGCAGTGCCCGGCACAGAATTAAGGTTTaGCATGAACATTATGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: RLGTRDAVSPSTCLCSARHRIKV*HEHYGG Trigger: GCCTCCATAATGTTCATGCAAAACCTTAATTCTGTG...CCGGGCACTGCAGAGACAGGTACTTGGACTTACAGCATCACGGGTACCAAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CAA 90 bp | GCTCCCAGAACAGGCAAAAATCCTTGGCTGACCCGTGCGTACACAATCATCCGGATAAGACGGTCTTCTTaGTCCATGCTTCCAGATTTA | + |
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Preference number: 5 (lower is better) Translates to: APRTGKNPWLTRAYTIIRIRRSS*SMLPDL Trigger: TAAATCTGGAAGCATGGACAAAGAAGACCGTCTTAT...CCGGATGATTGTGTACGCACGGGTCAGCCAAGGATTTTTGCCTGTTCTGGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CAA 90 bp | GAGTGGTTCCATGGTGGGACTTCTTGCTCGAGTGGTCACTGTCATTGTAATCAAACTCGCCTTCTGGACTaGAGCAGTGAAAATGTAGGT | + |
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Preference number: 5 (lower is better) Translates to: EWFHGGTSCSSGHCHCNQTRLLD*SSENVG Trigger: ACCTACATTTTCACTGCTCAAGTCCAGAAGGCGAGT...TTGATTACAATGACAGTGACCACTCGAGCAAGAAGTCCCACCATGGAACCACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS GCA 90 bp | GTTGTGAACCACATTGGTGCCAGTGATCCTGGTGGAACACCTTGTTaGTTCTATAGTGTTCTTTCTAGACATGTAGAAAGGCTGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VVNHIGASDPGGTPC*FYSVLSRHVERLVH Trigger: GTGGACCAGCCTTTCTACATGTCTAGAAAGAACACTATAGAAGCAACAAGGTGTTCCACCAGGATCACTGGCACCAATGTGGTTCACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS-3UTR CAA 90 bp | TGCTGGCTCATTCTGATGATGTATCTATGTGCTCTTCCATTGTCGAGAACCTTGCTGACATCGAAGGCTTaGCTCTCCAACTGTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: CWLILMMYLCALPLSRTLLTSKA*LSNCHV Trigger: GACATGACAGTTGGAGAGCAAAGCCTTCGATGTCAG...CAAGGTTCTCGACAATGGAAGAGCACATAGATACATCATCAGAATGAGCCAGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CAA 90 bp | GAGTGGTTCCATGGTGGGACTTCTTGCTCGAGTGGTCACTGTCATTGTAATCAACATACGATTCTCGTTTaGGCATTAAGTACTCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EWFHGGTSCSSGHCHCNQHTILV*ALSTQV Trigger: AACCTGAGTACTTAATGCCAAAACGAGAATCGTATG...TTGATTACAATGACAGTGACCACTCGAGCAAGAAGTCCCACCATGGAACCACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CAA 90 bp | GCTTCTTCTTGGACATCTGGTCTGGGTGGATTCAGTACAATTTTACCATTTTCCTTAAGTACTCAGGTTTaGACTTCCAGGTCATCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASSWTSGLGGFSTILPFSLSTQV*TSRSSG Trigger: TCCCGATGACCTGGAAGTCAAAACCTGAGTACTTAA...GGAAAATGGTAAAATTGTACTGAATCCACCCAGACCAGATGTCCAAGAAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CAA 90 bp | GCTTCTTCTTGGACATCTGGTCTGGGTGGATTCAGTACAATTTTACCATTTTCCGGGATAAATGTACATTaGGGTTCATACAGCCGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASSWTSGLGGFSTILPFSGINVH*GSYSRV Trigger: GACACGGCTGTATGAACCCAAATGTACATTTATCCC...GGAAAATGGTAAAATTGTACTGAATCCACCCAGACCAGATGTCCAAGAAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CAA 90 bp | TGCTGGCTCATTCTGATGATGTATCTATGTGCTCTTCCATTGTCGAGAACCTTGGTACAGTTCTGCTGCTaGATTCATTCGAATAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: CWLILMMYLCALPLSRTLVQFCC*IHSNKT Trigger: CGTCTTATTCGAATGAATCAAGCAGCAGAACTGTAC...CAAGGTTCTCGACAATGGAAGAGCACATAGATACATCATCAGAATGAGCCAGCA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS-3UTR CAA 90 bp | CAAATTGTCATAGAGATTGCAGAAATATCATCACCCAGTGCAGAGATACTATCTCCAGCCGTCTGTATTTaGTCTGGGATAAATGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: QIVIEIAEISSPSAEILSPAVCI*SGINVH Trigger: ATGTACATTTATCCCAGACAAAATACAGACGGCTGG...AGATAGTATCTCTGCACTGGGTGATGATATTTCTGCAATCTCTATGACAATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS TCA 72 bp | CTCGGGCAGCCGAAGGCCCCAGAGCGATGGTGTGGATaGTGGCACCGCTGCGAGAGACGGCCTCAAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LGQPKAPERWCG*WHRCERRPQSR Trigger: CCTGCTTTGAGGCCGTCTCTCGCAGCGGTGCCATCATCCACACCATCGCTCTGGGGCCTTCGGCTGCCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS GCA 72 bp | GCCCCTGCTCTGACATCGAAGGCTTTGCTCTCCAACTaGAGAGCCTGCTGGGAGACGCTGCCACTTGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: APALTSKALLSN*RACWETLPLVD Trigger: ATCTACAAGTGGCAGCGTCTCCCAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCGATGTCAGAGCAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059091.6 |
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| CDS CAA 72 bp | CCGTTTATCCATGCCCCTGCTCTGACATCGAAGGCTTaGCTCTCCAACTGCAGAGCCTGCTGGGAGACGCTG | + |
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Preference number: 6 (lower is better) Translates to: PFIHAPALTSKA*LSNCRACWETL Trigger: CAGCGTCTCCCAGCAGGCTCTGCAGTTGGAGAGCAAAGCCTTCGATGTCAGAGCAGGGGCATGGATAAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059091.6 |
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| CDS TCA 72 bp | ACAGCCGTGTCTTCGAGTCACGCCGGCACGCCCTTGTaGCACAGTTGCCTCTCTCACAGTTGTGAACCACAT | + |
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Preference number: 6 (lower is better) Translates to: TAVSSSHAGTPL*HSCLSHSCEPH Trigger: ATGTGGTTCACAACTGTGAGAGAGGCAACTGTGTCACAAGGGCGTGCCGGCGTGACTCGAAGACACGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS TCA 72 bp | GGAGGGGCTTCTGTTCCTCTCATGGGAGGGGCATTCTaGAAGTCAGCAGACGTCTTGATTACATCCCACGTG | + |
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Preference number: 6 (lower is better) Translates to: GGASVPLMGGAF*KSADVLITSHV Trigger: CACGTGGGATGTAATCAAGACGTCTGCTGACTTTCAGAATGCCCCTCCCATGAGAGGAACAGAAGCCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS CAA 90 bp | TCCGGCACACTGGGGTTAATGGCAATGACCACACCCTCGTATCCATaGCTGTTGAGATGCACCATGGAGCTCTCTGTGTTCTGCAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGTLGLMAMTTPSYP*LLRCTMELSVFCRR Trigger: TCTCCTGCAGAACACAGAGAGCTCCATGGTGCATCTCAACAGCAATGGATACGAGGGTGTGGTCATTGCCATTAACCCCAGTGTGCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS CAA 90 bp | GTCCCCACACTGTCCATACTGAAGGGTGTAGGGGTCGTCTCCATGTaGCAGGTGAGGATCCGCAACTATGACGTCTGCTTTGTCATACGA | + |
|
Preference number: 6 (lower is better) Translates to: VPTLSILKGVGVVSM*QVRIRNYDVCFVIR Trigger: TCGTATGACAAAGCAGACGTCATAGTTGCGGATCCTCACCTGCAACATGGAGACGACCCCTACACCCTTCAGTATGGACAGTGTGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS CAA 90 bp | ATGGAGGCCCCAGCCGTCTGTATTTTGTCTGGGATAAATGTACATTaGGGTTCATACAGCCGTGTCTTCGAGTCACGCCGGCACGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: MEAPAVCILSGINVH*GSYSRVFESRRHAL Trigger: AAGGGCGTGCCGGCGTGACTCGAAGACACGGCTGTATGAACCCAAATGTACATTTATCCCAGACAAAATACAGACGGCTGGGGCCTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS TCA 72 bp | CCAGAGGTACTGTACCGTTTATCCATGCCCCTGCTCTaGCATCGAAGGCTTTGCTCTCCAACTGTCATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PEVLYRLSMPLL*HRRLCSPTVMS Trigger: GGACATGACAGTTGGAGAGCAAAGCCTTCGATGTCAGAGCAGGGGCATGGATAAACGGTACAGTACCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029932.14 |
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| CDS GCA 72 bp | GCAATGACCACACCCTCGTATCCATTGCTGTTGAGATaGACCATGGAGCTCTCTGTGTTCTGCAGGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: AMTTPSYPLLLR*TMELSVFCRRC Trigger: GCATCTCCTGCAGAACACAGAGAGCTCCATGGTGCATCTCAACAGCAATGGATACGAGGGTGTGGTCATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS GCA 72 bp | GACGGTACTGTCCAGAGGTACTGTACCGTTTATCCATaGCCCTGCTCTGACATCGAAGGCTTTGCTCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: DGTVQRYCTVYP*PCSDIEGFALQ Trigger: TTGGAGAGCAAAGCCTTCGATGTCAGAGCAGGGGCATGGATAAACGGTACAGTACCTCTGGACAGTACCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS CAA 72 bp | TTATCCAGCACCAAGCACACCACTCGCCTTCTGGACTaGAGCAGTGAAAATGTAGGTGGAGGAGGGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSTKHTTRLLD*SSENVGGGGAS Trigger: AGAAGCCCCTCCTCCACCTACATTTTCACTGCTCAAGTCCAGAAGGCGAGTGGTGTGCTTGGTGCTGGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS TCA 72 bp | AATTGCCTGAAATCCTGCCTGGAGTCCATGGCAAATTaGAGTTCCACCAGAAGCCTGTTGGGGGAGGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: NCLKSCLESMAN*SSTRSLLGEVC Trigger: GCAAACCTCCCCCAACAGGCTTCTGGTGGAACTTCAATTTGCCATGGACTCCAGGCAGGATTTCAGGCAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS CCA 72 bp | GTAGGTAGAGGCTTGAGTTACCATTTCCTTTATGCTTaGGATGAGCCTTTCGTCCTCCGGCACACTGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VGRGLSYHFLYA*DEPFVLRHTGV Trigger: AACCCCAGTGTGCCGGAGGACGAAAGGCTCATCCCAAGCATAAAGGAAATGGTAACTCAAGCCTCTACCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS CAA 72 bp | CCAGCCGTCTGTATTTTGTCTGGGATAAATGTACATTaGGGTTCATACAGCCGTGTCTTCGAGTCACGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PAVCILSGINVH*GSYSRVFESRR Trigger: CCGGCGTGACTCGAAGACACGGCTGTATGAACCCAAATGTACATTTATCCCAGACAAAATACAGACGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS GCA 72 bp | CACATTGGTGCCAGTGATCCTGGTGGAACACCTTGTTaGTTCTATAGTGTTCTTTCTAGACATGTAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: HIGASDPGGTPC*FYSVLSRHVER Trigger: CCTTTCTACATGTCTAGAAAGAACACTATAGAAGCAACAAGGTGTTCCACCAGGATCACTGGCACCAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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| CDS CAA 72 bp | CATACGATTCTCGTTTTGGCATTAAGTACTCAGGTTTaGACTTCCAGGTCATCGGGACTAATATGCTTATGT | + |
|
Preference number: 6 (lower is better) Translates to: HTILVLALSTQV*TSRSSGLICLC Trigger: ACATAAGCATATTAGTCCCGATGACCTGGAAGTCAAAACCTGAGTACTTAATGCCAAAACGAGAATCGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029932.14 ENSMUST00000059091.6 |
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