Pregenerated sensors for CLCA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036960Ensembl transcript IDs: ENSMUST00000040465.11, ENSMUST00000198993.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGACTaGAGCCCCACCTCTCCTTCACAGGTCTGTGGCCCAAGTTTTTGG | + |
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Preference number: 1 (lower is better) Translates to: LGLPARRRSLPSSLD*SPTSPSQVCGPSFW Trigger: CCAAAAACTTGGGCCACAGACCTGTGAAGGAGAGGTGGGGCTTCAGTCGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| 3UTR CCA 90 bp | GTCAGTAATTTTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTaGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGACT | + |
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Preference number: 1 (lower is better) Translates to: VSNFARWKHVRVGAV*DSQHGEGASRAHST Trigger: AGTCGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| 3UTR CCA 90 bp | ATGGCTTCCAGGTCAGTAATTTTGCACGGTGGAAACATGTCAGGGTaGGGGCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAG | + |
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Preference number: 1 (lower is better) Translates to: MASRSVILHGGNMSG*GPSGTPSTEKEPPE Trigger: CTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGACCTGGAAGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| 3UTR CCA 90 bp | GTCGTCTTCCACTTTCATGGCTTCCAGGTCAGTAATTTTGCACGGTaGAAACATGTCAGGGTGGGGGCCGTCTGGGACTCCCAGCACGGA | + |
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Preference number: 1 (lower is better) Translates to: VVFHFHGFQVSNFAR*KHVRVGAVWDSQHG Trigger: TCCGTGCTGGGAGTCCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGACCTGGAAGCCATGAAAGTGGAAGACGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| 3UTR CAA 90 bp | AGGACGACGTCGTCTTCCACTTTCATGGCTTCCAGGTCAGTAATTTaGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTGGGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: RTTSSSTFMASRSVI*HGGNMSGWGPSGTP Trigger: GGGAGTCCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGACCTGGAAGCCATGAAAGTGGAAGACGACGTCGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCAACAGTAAACTCCGGTaGCCTCTGCTACAGATCAGT | + |
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Preference number: 2 (lower is better) Translates to: VLDEEKNCMYLLNRGRICNSKLR*PLLQIS Trigger: ACTGATCTGTAGCAGAGGTCACCGGAGTTTACTGTT...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| 3UTR-3UTR TCA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCAACCCTTTCCCAAAATaGGTTAAAAGTTGGTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: VLDEEKNCMYLLNRGRICNPFPK*VKSWWV Trigger: AACCCACCAACTTTTAACTCATTTTGGGAAAGGGTT...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| 3UTR-3UTR TCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAGAACTTCCCCCAACCTaGACTTCAATAAAACAAGCT | + |
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Preference number: 2 (lower is better) Translates to: EFNQRTRYKEPCSMASSIELPPT*TSIKQA Trigger: AGCTTGTTTTATTGAAGTTCAGGTTGGGGGAAGTTC...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| 3UTR-3UTR GCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAATTTTGTTCTTCCTTTaGCTTTCAAGCCATTACCTT | + |
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Preference number: 2 (lower is better) Translates to: EFNQRTRYKEPCSMASSIILFFL*LSSHYL Trigger: AAGGTAATGGCTTGAAAGGCAAAGGAAGAACAAAAT...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| 3UTR GCA 72 bp | AAGCCTACTTTGCCCCTGATCGAAGTCTTCCCCAGGTaGCGTCCAAGAGAGGACGACGTCGTCTTCCACTTT | + |
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Preference number: 3 (lower is better) Translates to: KPTLPLIEVFPR*RPREDDVVFHF Trigger: AAAGTGGAAGACGACGTCGTCCTCTCTTGGACGGCACCTGGGGAAGACTTCGATCAGGGGCAAAGTAGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAAGGAATATACGTGTGAGAAATCACTGAATACCAAGTTGCAATGTAAAGACATCAGCAAGCCTACTTaGCCCCTGATCGAAGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: IKEYTCEKSLNTKLQCKDISKPT*PLIEVF Trigger: GAAGACTTCGATCAGGGGCAAAGTAGGCTTGCTGAT...GTCTTTACATTGCAACTTGGTATTCAGTGATTTCTCACACGTATATTCCTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| 3UTR TCA 72 bp | GTCAAACTATCAAGGAATATACGTGTGAGAAATCACTaGATACCAAGTTGCAATGTAAAGACTCATGCTAAA | + |
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Preference number: 3 (lower is better) Translates to: VKLSRNIRVRNH*IPSCNVKTHAK Trigger: TTTAGCATGAGTCTTTACATTGCAACTTGGTATTCAGTGATTTCTCACACGTATATTCCTTGATAGTTTGAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | GGGGGCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGACTGCACGGGGAGGCTATaGTTCAGGTCGGAGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GGRLGLPARRRSLPSSLDCTGRL*FRSEEA Trigger: AGCCTCCTCCGACCTGAACCATAGCCTCCCCGTGCA...GTCGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR TCA 90 bp | TGTCAGGGTGGGGGCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCCAAGTTTCAGCCCGATaGCAGGTCCTGTGCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: CQGGGRLGLPARRRSLPSQVSAR*QVLCCP Trigger: GGGACAGCACAGGACCTGTCATCGGGCTGAAACTTG...GCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGCCCCCACCCTGACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR TCA 90 bp | TTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTGGGACTCCCAGCACGGAGGGCGGTCGGCAGGTATaGAACCAGCAGCTTCCGGTC | + |
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Preference number: 4 (lower is better) Translates to: LHGGNMSGWGPSGTPSTEGGRQV*NQQLPV Trigger: GACCGGAAGCTGCTGGTTTCATACCTGCCGACCGCC...CTCCGTGCTGGGAGTCCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | GGGGGCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGACATTCCCCCACTTTTCTaGCTGCAGAGGAACCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GGRLGLPARRRSLPSSLDIPPLF*LQRNPG Trigger: CCCTGGGTTCCTCTGCAGCCAGAAAAGTGGGGGAAT...GTCGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | GTGGAAACATGTCAGGGTGGGGGCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCAAAGGCTTCCAGAGTaGCTGGGGACATGGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VETCQGGGRLGLPARRRSQRLPE*LGTWPG Trigger: GCCTGGCCATGTCCCCAGCCACTCTGGAAGCCTTTG...GCTCCTTCTCCGTGCTGGGAGTCCCAGACGGCCCCCACCCTGACATGTTTCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | AATTTTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTGGGACTCCCAGCACGGGACATGGCCAGGCTaGAGGCACGAGAGGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: NFARWKHVRVGAVWDSQHGTWPG*RHERPL Trigger: CAGTGGCCTCTCGTGCCTCCAGCCTGGCCATGTCCC...GTGCTGGGAGTCCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR GCA 90 bp | GTGGGGGCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGGCTGAGGAAAATAGGTaGTGTCTCTTTCCACAAAGG | + |
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Preference number: 4 (lower is better) Translates to: VGAVWDSQHGEGASRAHSAEENR*CLFPQR Trigger: CCTTTGTGGAAAGAGACAGCACCTATTTTCCTCAGC...CGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGCCCCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | TGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGACTGAAGCCCCAGGGCCATGGAGTGAATaGTGGATCCACTGTTCATCG | + |
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Preference number: 4 (lower is better) Translates to: WDSQHGEGASRAHSTEAPGPWSE*WIHCSS Trigger: CGATGAACAGTGGATCCACCATTCACTCCATGGCCC...TGGGGCTTCAGTCGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR TCA 90 bp | GGGGGCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGACCTTTGCTATCAAAAGTaGCAATGCCCACGAAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: GGRLGLPARRRSLPSSLDLCYQK*QCPRKC Trigger: ACACTTTCGTGGGCATTGTCACTTTTGATAGCAAAG...GTCGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR GCA 90 bp | GCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGACTGAACCGCCATCCAAAAGTTaGAGTACAACGGGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: AVWDSQHGEGASRAHSTEPPSKS*STTGSP Trigger: TGGAGATCCCGTTGTACTGCAACTTTTGGATGGCGG...TTCAGTCGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | TGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGACTGAAGCCCCACCATGGAGTGAATGGTaGATCCACTGTTCATCGAGG | + |
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Preference number: 4 (lower is better) Translates to: WDSQHGEGASRAHSTEAPPWSEW*IHCSSR Trigger: CCTCGATGAACAGTGGATCCACCATTCACTCCATGG...TGGGGCTTCAGTCGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGGCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGACCTGTAAGCTTTGCTaGAAAATGTCTCCTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VGAVWDSQHGEGASRAHSTCKLC*KMSPVP Trigger: TGGAACAGGAGACATTTTCCAGCAAAGCTTACAGGT...CGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGCCCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | GCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGACTGAATTGGTTCTGGAGGTTTaGAGCTTCTTGGTTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: AVWDSQHGEGASRAHSTELVLEV*SFLVVC Trigger: ACACACAACCAAGAAGCTCCAAACCTCCAGAACCAA...TTCAGTCGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR TCA 90 bp | GAAGGAGCCTCCCGAGCTCACTCGACTGAAGCCCCACCTCTCCTTCACAGGTCTCAGATGAACACCTGGTaGCTTGAATCTCATTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: EGASRAHSTEAPPLLHRSQMNTW*LESHSV Trigger: GACGGAATGAGATTCAAGTCACCAGGTGTTCATCTG...AGACCTGTGAAGGAGAGGTGGGGCTTCAGTCGAGTGAGCTCGGGAGGCTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | GAAGGAGCCTCCCGAGCTCACTCGACTGAAGCCCCACCTCTCCTTCACAGGTCTATAATGCAGTCTTCATaGGGGCAGAGGCCCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: EGASRAHSTEAPPLLHRSIMQSS*GQRPFS Trigger: TGAAAAGGGCCTCTGCCCCCATGAAGACTGCATTAT...AGACCTGTGAAGGAGAGGTGGGGCTTCAGTCGAGTGAGCTCGGGAGGCTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | AATTTTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTGGGACTCCCAGCACGTCACTTTCAGAGCTTaGGGAGAATGGTGGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: NFARWKHVRVGAVWDSQHVTFRA*GEWWVL Trigger: CAACACCCACCATTCTCCCCAAGCTCTGAAAGTGAC...GTGCTGGGAGTCCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR TCA 90 bp | AATTTTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTGGGACTCCCAGCACCACCAGTCTGCCACGTaGCTAGAAAAAGTGTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: NFARWKHVRVGAVWDSQHHQSAT*LEKVCH Trigger: ATGACACACTTTTTCTAGTCACGTGGCAGACTGGTG...GTGCTGGGAGTCCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | GCTTCCAGGTCAGTAATTTTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTAAGCTGGGGGTGAAGTaGATGTATCTCCCCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ASRSVILHGGNMSGWGPSKLGVK*MYLPSC Trigger: GCAAGAGGGGAGATACATCCACTTCACCCCCAGCTT...AGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGACCTGGAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | GCTTCCAGGTCAGTAATTTTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTCTGCACACTTGGTTCTaGAGGTTTGGAGCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ASRSVILHGGNMSGWGPSLHTWF*RFGASW Trigger: CCAAGAAGCTCCAAACCTCCAGAACCAAGTGTGCAG...AGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGACCTGGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| 3UTR CAA 72 bp | TCGTCTTCCACTTTCATGGCTTCCAGGTCAGTAATTTaGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: SSSTFMASRSVI*HGGNMSGWGPS Trigger: AGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGACCTGGAAGCCATGAAAGTGGAAGACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR TCA 90 bp | GCTTCCAGGTCAGTAATTTTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTTCTGCTCAGCCACTATaGCATTTGCCTTGTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: ASRSVILHGGNMSGWGPSSAQPL*HLPCHR Trigger: CCTATGACAAGGCAAATGTCATAGTGGCTGAGCAGA...AGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGACCTGGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR GCA 90 bp | AGGTCAGTAATTTTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTGGGACTCCGTGTTCCTCACTCTaGTCAGCCACTATGACATTT | + |
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Preference number: 4 (lower is better) Translates to: RSVILHGGNMSGWGPSGTPCSSL*SATMTF Trigger: AAATGTCATAGTGGCTGAGCAGAGTGAGGAACACGG...AGTCCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCGGGACATGGCCAGGCTaGAGGCACGAGAGGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LPVKPHGSRNHFHSILPSGTWPG*RHERPL Trigger: CAGTGGCCTCTCGTGCCTCCAGCCTGGCCATGTCCC...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR CCA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCGGCTTCCAGAGTGGCTaGGGACATGGCCAGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LPVKPHGSRNHFHSILPSGFQSG*GHGQAG Trigger: TCCAGCCTGGCCATGTCCCCAGCCACTCTGGAAGCC...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR TCA 90 bp | AGGTCAGTAATTTTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTGGGACTTGGCATGAACATTATTaGTCCAGTTGCATTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: RSVILHGGNMSGWGPSGTWHEHY*SSCILG Trigger: ACCCAGAATGCAACTGGATCAATAATGTTCATGCCA...AGTCCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR TCA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCCAAGTTTCAGCCCGATaGCAGGTCCTGTGCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LPVKPHGSRNHFHSILPSQVSAR*QVLCCP Trigger: GGGACAGCACAGGACCTGTCATCGGGCTGAAACTTG...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR TCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAGGCGGTCGGCAGGTATaGAACCAGCAGCTTCCGGTC | + |
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Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSIGGRQV*NQQLPV Trigger: GACCGGAAGCTGCTGGTTTCATACCTGCCGACCGCC...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR CCA 90 bp | AAGGTACTTATGAAACAAATCAGCAAGCCTACTTTGCCCCTGATCGAAGTCTTCAGAGCTTGGGGAGAATaGTGGGTGTTGTTCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: KVLMKQISKPTLPLIEVFRAWGE*WVLFSV Trigger: CACGCTGAACAACACCCACCATTCTCCCCAAGCTCT...GAAGACTTCGATCAGGGGCAAAGTAGGCTTGCTGATTTGTTTCATAAGTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | ATCAAGGAATATACGTGTGAGAAATCACTGAATACCAAGTTGCAATGTAAAGACGGCTTCCAGAGTGGCTaGGGACATGGCCAGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: IKEYTCEKSLNTKLQCKDGFQSG*GHGQAG Trigger: TCCAGCCTGGCCATGTCCCCAGCCACTCTGGAAGCC...GTCTTTACATTGCAACTTGGTATTCAGTGATTTCTCACACGTATATTCCTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS-3UTR CCA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGGGAAACATGTCAGGGTaGGGGCCGTCTGGGACTCCC | + |
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Preference number: 4 (lower is better) Translates to: LFTFYFVDVKVMSILPKKGNMSG*GPSGTP Trigger: GGGAGTCCCAGACGGCCCCCACCCTGACATGTTTCC...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR TCA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCCTGGTGCCAGCATGCTaGGGAACTAGCTCTGACGAA | + |
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Preference number: 4 (lower is better) Translates to: VLDEEKNCMYLLNRGRICLVPAC*GTSSDE Trigger: TTCGTCAGAGCTAGTTCCTCAGCATGCTGGCACCAG...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR GCA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCCCGCCATCCAAAAGTTaGAGTACAACGGGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LPVKPHGSRNHFHSILPSPPSKS*STTGSP Trigger: TGGAGATCCCGTTGTACTGCAACTTTTGGATGGCGG...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR CCA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCCTGCACACTTGGTTCTaGAGGTTTGGAGCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LPVKPHGSRNHFHSILPSLHTWF*RFGASW Trigger: CCAAGAAGCTCCAAACCTCCAGAACCAAGTGTGCAG...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR CCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATATGCACGGGGAGGCTATaGTTCAGGTCGGAGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSICTGRL*FRSEEA Trigger: AGCCTCCTCCGACCTGAACCATAGCCTCCCCGTGCA...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR CCA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGCAAAGGCTTCCAGAGTaGCTGGGGACATGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFTFYFVDVKVMSILPKKQRLPE*LGTWPG Trigger: GCCTGGCCATGTCCCCAGCCACTCTGGAAGCCTTTG...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCGGTACATACATAGCATaGTTTCCTGGGACAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPVKPHGSRNHFHSILPSGTYIA*FPGTGR Trigger: CCTCCCTGTCCCAGGAAACCATGCTATGTATGTACC...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCCAGATGAACACCTGGTaGCTTGAATCTCATTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPVKPHGSRNHFHSILPSQMNTW*LESHSV Trigger: GACGGAATGAGATTCAAGTCACCAGGTGTTCATCTG...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATACTTGTGCTGGGAGAGTaGCGGACATGCACTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSILVLGE*RTCTVR Trigger: CCTGACAGTGCATGTCCGTCACTCTCCCAGCACAAG...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR GCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAGAAGTCTTCCCCAGGTaGCGTCCAAGAGAGGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSIEVFPR*RPREDD Trigger: GTCGTCCTCTCTTGGACGGCACCTGGGGAAGACTTC...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCGGGCCATGGAGTGAATaGTGGATCCACTGTTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: VLDEEKNCMYLLNRGRICGPWSE*WIHCSS Trigger: CGATGAACAGTGGATCCACCATTCACTCCATGGCCC...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCAGTAATTTTGCACGGTaGAAACATGTCAGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPVKPHGSRNHFHSILPSSNFAR*KHVRVG Trigger: CCCCACCCTGACATGTTTCCACCGTGCAAAATTACT...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | AAGGTACTTATGAAACAAATCAGCAAGCCTACTTTGCCCCTGATCGAAGTCTTCTCCTCTTGGTCGCATTaGACAGGTAAAAGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVLMKQISKPTLPLIEVFSSWSH*TGKRKL Trigger: AAGCTTCCTTTTACCTGTTCAATGCGACCAAGAGGA...GAAGACTTCGATCAGGGGCAAAGTAGGCTTGCTGATTTGTTTCATAAGTACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCATGTTGTGTTATTGAGCTGTCTCTAGCTTTTGCTTTAACTAGTGAAGCTCAGTCTGTCTCCCTCTaGCATCTTCCTGGACACATC | + |
|
Preference number: 4 (lower is better) Translates to: SSCCVIELSLAFALTSEAQSVSL*HLPGHI Trigger: GATGTGTCCAGGAAGATGGCAGAGGGAGACAGACTG...AGCTTCACTAGTTAAAGCAAAAGCTAGAGACAGCTCAATAACACAACATGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS-3UTR CCA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCTTGGTTCTGGAGGTTTaGAGCTTCTTGGTTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPVKPHGSRNHFHSILPSLVLEV*SFLVVC Trigger: ACACACAACCAAGAAGCTCCAAACCTCCAGAACCAA...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGATTCCCCCACTTTTCTaGCTGCAGAGGAACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTFYFVDVKVMSILPKKIPPLF*LQRNPG Trigger: CCCTGGGTTCCTCTGCAGCCAGAAAAGTGGGGGAAT...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| 3UTR CAA 72 bp | TGCTACAGATCAGTATCCAAGGGACAAGGACAACAATaGCATTCTAAGGTCTCCTCTCATGGTGAGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CYRSVSKGQGQQ*HSKVSSHGEKS Trigger: ACTTTTCTCACCATGAGAGGAGACCTTAGAATGCAATTGTTGTCCTTGTCCCTTGGATACTGATCTGTAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCTCTGCTCAGCCACTATaGCATTTGCCTTGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLDEEKNCMYLLNRGRICSAQPL*HLPCHR Trigger: CCTATGACAAGGCAAATGTCATAGTGGCTGAGCAGA...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATATTGACACAGCTGACCTaGGGGAGCTTCTATCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSILTQLT*GSFYPW Trigger: CCATGGATAGAAGCTCCCTCAGGTCAGCTGTGTCAA...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR GCA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGCAGTCTGTCTCCCTCTaGCATCTTCCTGGACACATC | + |
|
Preference number: 4 (lower is better) Translates to: LFTFYFVDVKVMSILPKKQSVSL*HLPGHI Trigger: GATGTGTCCAGGAAGATGGCAGAGGGAGACAGACTG...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR GCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAACAGATGTTCGTTTCTaGGTCAGTGGACACGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSITDVRF*VSGHGG Trigger: ACCGCCGTGTCCACTGACGCAGAAACGAACATCTGT...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAAAGCTGGGGGTGAAGTaGATGTATCTCCCCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSIKLGVK*MYLPSC Trigger: GCAAGAGGGGAGATACATCCACTTCACCCCCAGCTT...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCACCTGTAAGCTTTGCTaGAAAATGTCTCCTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPVKPHGSRNHFHSILPSTCKLC*KMSPVP Trigger: TGGAACAGGAGACATTTTCCAGCAAAGCTTACAGGT...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGAGAGCTTGGGGAGAATaGTGGGTGTTGTTCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFTFYFVDVKVMSILPKKRAWGE*WVLFSV Trigger: CACGCTGAACAACACCCACCATTCTCCCCAAGCTCT...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | AAGGTACTTATGAAACAAATCAGCAAGCCTACTTTGCCCCTGATCGAAGTCTTCCGCATAAATGATCACTaGCTGAGGAAAATAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVLMKQISKPTLPLIEVFRINDH*LRKIGA Trigger: AGCACCTATTTTCCTCAGCCAGTGATCATTTATGCG...GAAGACTTCGATCAGGGGCAAAGTAGGCTTGCTGATTTGTTTCATAAGTACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTACTTATGAAACAAATCAGCAAGCCTACTTTGCCCCTGATCGAAGTCTTCTCAACCTGTAAGCTTTaGTGGAAAATGTCTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVLMKQISKPTLPLIEVFSTCKL*WKMSPV Trigger: AACAGGAGACATTTTCCAGCAAAGCTTACAGGTTGA...GAAGACTTCGATCAGGGGCAAAGTAGGCTTGCTGATTTGTTTCATAAGTACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS-3UTR GCA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCGGATCAGATCATCTCTaGTCACTACAGGAGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLDEEKNCMYLLNRGRICGSDHL*SLQEKS Trigger: ACTCTTCTCCTGTAGTGAGCAGAGATGATCTGATCC...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGCCATGGAGTGAATGGTaGATCCACTGTTCATCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTFYFVDVKVMSILPKKPWSEW*IHCSSR Trigger: CCTCGATGAACAGTGGATCCACCATTCACTCCATGG...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAGTCACTTTCAGAGCTTaGGGAGAATGGTGGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSIVTFRA*GEWWVL Trigger: CAACACCCACCATTCTCCCCAAGCTCTGAAAGTGAC...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGCACCAGTCTGCCACGTaGCTAGAAAAAGTGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFTFYFVDVKVMSILPKKHQSAT*LEKVCH Trigger: ATGACACACTTTTTCTAGTCACGTGGCAGACTGGTG...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAGGTGACAAGCTTGGGTaGGAATGTAAATGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSIGDKLG*ECKCLP Trigger: AGGGAGACATTTACATTCTCACCCAAGCTTGTCACC...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCTCTTCAGCAAGTTCATaGTCAAGTTCATGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VLDEEKNCMYLLNRGRICSSASS*SSSWVT Trigger: TGTCACCCATGAACTTGATCATGAACTTGCTGAAGA...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR GCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATACCGTGTTCCTCACTCTaGTCAGCCACTATGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSIPCSSL*SATMTF Trigger: AAATGTCATAGTGGCTGAGCAGAGTGAGGAACACGG...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGATAATGCAGTCTTCATaGGGGCAGAGGCCCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFTFYFVDVKVMSILPKKIMQSS*GQRPFS Trigger: TGAAAAGGGCCTCTGCCCCCATGAAGACTGCATTAT...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCTGTGGCCCAAGTTTTTaGGAGCATTCATTTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LPVKPHGSRNHFHSILPSCGPSF*EHSFEY Trigger: ATATTCAAATGAATGCTCCCAAAAACTTGGGCCACA...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATATCCTCTTGGTCGCATTaGACAGGTAAAAGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSISSWSH*TGKRKL Trigger: AAGCTTCCTTTTACCTGTTCAATGCGACCAAGAGGA...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCTCACATTCGCATAAATaGTCACTGGCTGAGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLDEEKNCMYLLNRGRICSHSHK*SLAEEN Trigger: ATTTTCCTCAGCCAGTGATCATTTATGCGAATGTGA...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR GCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAGCTGAGGAAAATAGGTaGTGTCTCTTTCCACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSIAEENR*CLFPQR Trigger: CCTTTGTGGAAAGAGACAGCACCTATTTTCCTCAGC...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGTGGCATGAACATTATTaGTCCAGTTGCATTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFTFYFVDVKVMSILPKKWHEHY*SSCILG Trigger: ACCCAGAATGCAACTGGATCAATAATGTTCATGCCA...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATACTTTGCTATCAAAAGTaGCAATGCCCACGAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSILCYQK*QCPRKC Trigger: ACACTTTCGTGGGCATTGTCACTTTTGATAGCAAAG...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGCGCATAAATGATCACTaGCTGAGGAAAATAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFTFYFVDVKVMSILPKKRINDH*LRKIGA Trigger: AGCACCTATTTTCCTCAGCCAGTGATCATTTATGCG...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAAAATCTGTACATTTCTaGAAAACACCCTCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSIKSVHF*KTPSSW Trigger: CCAAGAGGAGGGTGTTTTTCAGAAATGTACAGATTT...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR TCA 90 bp | TGTTGTGTTATTGAGCTGTCTCTAGCTTTTGCTTTAACTAGTGAAGCTTTTTGTTCACATTCGCATAAATaGTCACTGGCTGAGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CCVIELSLAFALTSEAFCSHSHK*SLAEEN Trigger: ATTTTCCTCAGCCAGTGATCATTTATGCGAATGTGA...ACAAAAAGCTTCACTAGTTAAAGCAAAAGCTAGAGACAGCTCAATAACACAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGTCAACCTGTAAGCTTTaGTGGAAAATGTCTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFTFYFVDVKVMSILPKKSTCKL*WKMSPV Trigger: AACAGGAGACATTTTCCAGCAAAGCTTACAGGTTGA...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAAGGTTTGGAGCTTCTTaGTTGTGTGTACTTTCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSIRFGAS*LCVLSL Trigger: TAACGAAAGTACACACAACCAAGAAGCTCCAAACCT...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR GCA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGAATAAGGCAAAGGATTaGTATCAAACCTACTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFTFYFVDVKVMSILPKKNKAKD*YQTYCC Trigger: ACAACAGTAGGTTTGATAGCAATCCTTTGCCTTATT...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CCA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAGTTTGTTATGTAACCTaGTACATACATAGCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EFNQRTRYKEPCSMASSIVCYVT*YIHSMV Trigger: AACCATGCTATGTATGTACCAGGTTACATAACAAAC...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CAA 90 bp | GGGGGCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGACGAGGTGAGCAGGCAGTaGGCAATGTGTTCATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGRLGLPARRRSLPSSLDEVSRQ*AMCSSA Trigger: AGCAGATGAACACATTGCCAACTGCCTGCTCACCTC...GTCGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGGGCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGAGAAAAAGTGTGTCATaGCCCACGGCGCTATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VGAVWDSQHGEGASRAHSRKSVS*PTALST Trigger: TGTGGATAGCGCCGTGGGCAATGACACACTTTTTCT...CGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGCCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS-3UTR CAA 90 bp | TTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTGGGACTCCCAGCACGGAGCAGTTCGGCTGCTTGTaGAAGTCGGAGCAGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHGGNMSGWGPSGTPSTEQFGCL*KSEQSV Trigger: GACAGACTGCTCCGACTTCAACAAGCAGCCGAACTG...CTCCGTGCTGGGAGTCCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGAGCCTCCCGAGCTCACTCGACTGAAGCCCCACCTCTCCTTCACAGGTCTGCCACCACGGTGGCATaGAGAATGGGATGCAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: EGASRAHSTEAPPLLHRSATTVA*RMGCRP Trigger: AGGTCTGCATCCCATTCTCAATGCCACCGTGGTGGC...AGACCTGTGAAGGAGAGGTGGGGCTTCAGTCGAGTGAGCTCGGGAGGCTCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS-3UTR CAA 90 bp | TTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTGGGACTCCCAGCACGGAGTGTCACTTTCAGAGCTaGGGGAGAATGGTGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LHGGNMSGWGPSGTPSTECHFQS*GRMVGV Trigger: AACACCCACCATTCTCCCCAAGCTCTGAAAGTGACA...CTCCGTGCTGGGAGTCCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS GCA 90 bp | TTCCTGGACACATCAATCACTAAGCAGACCACTCGGTCACCAGCCTaGAAGAGGGAGAACGTGGGAGGGGCTGGAAGTCCAACCCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: FLDTSITKQTTRSPA*KRENVGGAGSPTPC Trigger: GCATGGGGTTGGACTTCCAGCCCCTCCCACGTTCTCCCTCTTGCAGGCTGGTGACCGAGTGGTCTGCTTAGTGATTGATGTGTCCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGGTCAGTAATTTTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTGGGTCGGGTACCCGGGGATaGATGGCAACAAGCAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRSVILHGGNMSGWGPSGSGTRG*MATSNP Trigger: TGGATTGCTTGTTGCCATCAATCCCCGGGTACCCGA...CCCAGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGACCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS-3UTR CAA 90 bp | GCCGTCTGGGACTCCCAGCACGGAGAAGGAGCCTCCCGAGCTCACTCGACTGAAACATTATTGATCCAGTaGCATTCTGGGTGCTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AVWDSQHGEGASRAHSTETLLIQ*HSGCCC Trigger: ACAACAGCACCCAGAATGCAACTGGATCAATAATGT...TTCAGTCGAGTGAGCTCGGGAGGCTCCTTCTCCGTGCTGGGAGTCCCAGACGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS TCA 90 bp | AACCCAGGGCCATGGAGTGAATGGTGGATCCACTGTTCATCGAGGTaGGCAGGCAGTTGGCAATGTGTTCATCTGCTCCACTGGTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: NPGPWSEWWIHCSSR*AGSWQCVHLLHWSL Trigger: TAGTGACCAGTGGAGCAGATGAACACATTGCCAACTGCCTGCTCACCTCGATGAACAGTGGATCCACCATTCACTCCATGGCCCTGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCCAGGTCAGTAATTTTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTCTTGGTTCTGGAGGTTaGGAGCTTCTTGGTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASRSVILHGGNMSGWGPSLGSGG*ELLGCV Trigger: CACACAACCAAGAAGCTCCAAACCTCCAGAACCAAG...AGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGACCTGGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS-3UTR CAA 90 bp | CACGGAGAAGGAGCCTCCCGAGCTCACTCGACTGAAGCCCCACCTCTCCTTCACATAAAGTCACCAGTGTaGTATTTTCTTCCGCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HGEGASRAHSTEAPPLLHIKSPV*YFLPLG Trigger: TCCTAGCGGAAGAAAATACAACACTGGTGACTTTAT...GTGAAGGAGAGGTGGGGCTTCAGTCGAGTGAGCTCGGGAGGCTCCTTCTCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS GCA 90 bp | CCATCATTTCTTATAACATCTGCACCTGCTCCGCCATCCAAAAGTTaGAGTACAACGGGATCTCCAGCCTCTGGTTCCACTGTCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PSFLITSAPAPPSKS*STTGSPASGSTVAT Trigger: GGTGGCGACAGTGGAACCAGAGGCTGGAGATCCCGTTGTACTGCAACTTTTGGATGGCGGAGCAGGTGCAGATGTTATAAGAAATGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
||
| CDS TCA 90 bp | GAGGAAGAGACATTGATACCAGGGCAATGTTTGACACAGCTGACCTaGGGGAGCTTCTATCCATGGCTCTCAGGGCCACATACACTATGT | + |
|
Preference number: 5 (lower is better) Translates to: EEETLIPGQCLTQLT*GSFYPWLSGPHTLC Trigger: ACATAGTGTATGTGGCCCTGAGAGCCATGGATAGAAGCTCCCTCAGGTCAGCTGTGTCAAACATTGCCCTGGTATCAATGTCTCTTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CAA 90 bp | GCTTCCAGGTCAGTAATTTTGCACGGTGGAAACATGTCAGGGTGGGGGCCGTCTTTTGGAGCTTCTTGGTaGTGTGTACTTTCGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: ASRSVILHGGNMSGWGPSFGASW*CVLSLQ Trigger: CTGTAACGAAAGTACACACAACCAAGAAGCTCCAAA...AGACGGCCCCCACCCTGACATGTTTCCACCGTGCAAAATTACTGACCTGGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS GCA 90 bp | TGCTGGGGTTGCACAGTTTCGCACACGCTCTCAACCTGTAAGCTTTaGTGGAAAATGTCTCCTGTTCCAGAAGAGATTCGAACGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CWGCTVSHTLSTCKL*WKMSPVPEEIRTKA Trigger: AGCTTTCGTTCGAATCTCTTCTGGAACAGGAGACATTTTCCAGCAAAGCTTACAGGTTGAGAGCGTGTGCGAAACTGTGCAACCCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTACTTATGAAACAAATCAGCAAGCCTACTTTGCCCCTGATCGAAGTCTTCGATGTATCTCCCCTCTaGCCCACACCCTCTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KVLMKQISKPTLPLIEVFDVSPL*PTPSVL Trigger: CAGCACAGAGGGTGTGGGCAAGAGGGGAGATACATC...GAAGACTTCGATCAGGGGCAAAGTAGGCTTGCTGATTTGTTTCATAAGTACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS TCA 90 bp | ACAAGCTTGGGTGAGAATGTAAATGTCTCCCTGGTGCCAGCATGCTaGGGAACTAGCTCTGACGAATTCACCAAGATGGCATTGTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSLGENVNVSLVPAC*GTSSDEFTKMALSK Trigger: CTTTGACAATGCCATCTTGGTGAATTCGTCAGAGCTAGTTCCTCAGCATGCTGGCACCAGGGAGACATTTACATTCTCACCCAAGCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS CCA 90 bp | TGGGGTTGCACAGTTTCGCACACGCTCTCAACCTGTAAGCTTTGCTaGAAAATGTCTCCTGTTCCAGAAGAGATTCGAACGAAAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WGCTVSHTLSTCKLC*KMSPVPEEIRTKAS Trigger: TGAAGCTTTCGTTCGAATCTCTTCTGGAACAGGAGACATTTTCCAGCAAAGCTTACAGGTTGAGAGCGTGTGCGAAACTGTGCAACCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
||
| CDS-3UTR CAA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCTCGGGTACCCGGGGATaGATGGCAACAAGCAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPVKPHGSRNHFHSILPSSGTRG*MATSNP Trigger: TGGATTGCTTGTTGCCATCAATCCCCGGGTACCCGA...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS TCA 90 bp | AAATTTGCTGCAGCGAGGCTCGGATTTCTCCTTTGCTATCAAAAGTaGCAATGCCCACGAAAGTGTGAGCTTCGACAACCTGCATCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KFAAARLGFLLCYQK*QCPRKCELRQPASS Trigger: ACTTGATGCAGGTTGTCGAAGCTCACACTTTCGTGGGCATTGTCACTTTTGATAGCAAAGGAGAAATCCGAGCCTCGCTGCAGCAAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
||
| CDS CCA 90 bp | GAGAATGGGATGCAGACCTTTCCTCACATTCGCATAAATGATCACTaGCTGAGGAAAATAGGTGCTGTCTCTTTCCACAAAGGCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ENGMQTFPHIRINDH*LRKIGAVSFHKGFQ Trigger: CTGGAAGCCTTTGTGGAAAGAGACAGCACCTATTTTCCTCAGCCAGTGATCATTTATGCGAATGTGAGGAAAGGTCTGCATCCCATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
||
| CDS-3UTR CAA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCGATGTATCTCCCCTCTaGCCCACACCCTCTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLDEEKNCMYLLNRGRICDVSPL*PTPSVL Trigger: CAGCACAGAGGGTGTGGGCAAGAGGGGAGATACATC...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CAA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCGCCACCACGGTGGCATaGAGAATGGGATGCAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: VLDEEKNCMYLLNRGRICATTVA*RMGCRP Trigger: AGGTCTGCATCCCATTCTCAATGCCACCGTGGTGGC...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS TCA 90 bp | GGGTGTAGGGATCATCTCCGTGTTCCTCACTCTGCTCAGCCACTATaGCATTTGCCTTGTCATAGGATTCTTGTCTTACTCTACTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: GCRDHLRVPHSAQPL*HLPCHRILVLLYCN Trigger: ATTACAGTAGAGTAAGACAAGAATCCTATGACAAGGCAAATGTCATAGTGGCTGAGCAGAGTGAGGAACACGGAGATGATCCCTACACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
||
| CDS GCA 90 bp | GGAGGAAAAATACCTGGAGTAAATCCCATCATTTCTTATAACATCTaGACCTGCTCCGCCATCCAAAAGTTGCAGTACAACGGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGKIPGVNPIISYNI*TCSAIQKLQYNGIS Trigger: GGAGATCCCGTTGTACTGCAACTTTTGGATGGCGGAGCAGGTGCAGATGTTATAAGAAATGATGGGATTTACTCCAGGTATTTTTCCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR CAA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCCAGTTCGGCTGCTTGTaGAAGTCGGAGCAGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLDEEKNCMYLLNRGRICQFGCL*KSEQSV Trigger: GACAGACTGCTCCGACTTCAACAAGCAGCCGAACTG...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CAA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCAGAAAAAGTGTGTCATaGCCCACGGCGCTATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LPVKPHGSRNHFHSILPSRKSVS*PTALST Trigger: TGTGGATAGCGCCGTGGGCAATGACACACTTTTTCT...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR CAA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCTGTCACTTTCAGAGCTaGGGGAGAATGGTGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPVKPHGSRNHFHSILPSCHFQS*GRMVGV Trigger: AACACCCACCATTCTCCCCAAGCTCTGAAAGTGACA...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR CAA 90 bp | AGTTCATGTTGTGTTATTGAGCTGTCTCTAGCTTTTGCTTTAACTAGTGAAGCTTCTGAGGCTGCACACTaGGTTCTGGAGGTTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCCVIELSLAFALTSEASEAAH*VLEVWS Trigger: GCTCCAAACCTCCAGAACCAAGTGTGCAGCCTCAGA...AGCTTCACTAGTTAAAGCAAAAGCTAGAGACAGCTCAATAACACAACATGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
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| CDS GCA 90 bp | GGGATCATCTCCGTGTTCCTCACTCTGCTCAGCCACTATGACATTTaGCTTGTCATAGGATTCTTGTCTTACTCTACTGTAATTATGATC | + |
|
Preference number: 5 (lower is better) Translates to: GIISVFLTLLSHYDI*LVIGFLSYSTVIMI Trigger: GATCATAATTACAGTAGAGTAAGACAAGAATCCTATGACAAGGCAAATGTCATAGTGGCTGAGCAGAGTGAGGAACACGGAGATGATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS-3UTR CAA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCGAGGTTTGGAGCTTCTaGGTTGTGTGTACTTTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPVKPHGSRNHFHSILPSEVWSF*VVCTFV Trigger: AACGAAAGTACACACAACCAAGAAGCTCCAAACCTC...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR CAA 90 bp | TTGTTCACATTTTATTTTGTGGATGTAAAGGTCATGTCCATCCTACCTAAGAAGTCTGAGGCTGCACACTaGGTTCTGGAGGTTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFTFYFVDVKVMSILPKKSEAAH*VLEVWS Trigger: GCTCCAAACCTCCAGAACCAAGTGTGCAGCCTCAGA...CTTCTTAGGTAGGATGGACATGACCTTTACATCCACAAAATAAAATGTGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR CAA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCTTTGGAGCTTCTTGGTaGTGTGTACTTTCGTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: LPVKPHGSRNHFHSILPSFGASW*CVLSLQ Trigger: CTGTAACGAAAGTACACACAACCAAGAAGCTCCAAA...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CAA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATAGAGGTGAGCAGGCAGTaGGCAATGTGTTCATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EFNQRTRYKEPCSMASSIEVSRQ*AMCSSA Trigger: AGCAGATGAACACATTGCCAACTGCCTGCTCACCTC...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS TCA 90 bp | GTGTACTTTCGTTACAGAATTCAACCACAGAAGGTAAACTTGGCATaGACATTATTGATCCAGTTGCATTCTGGGTGCTGTTGTAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VYFRYRIQPQKVNLA*TLLIQLHSGCCCRG Trigger: TCCTCTACAACAGCACCCAGAATGCAACTGGATCAATAATGTTCATGCCAAGTTTACCTTCTGTGGTTGAATTCTGTAACGAAAGTACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS GCA 90 bp | TCAAACCTACTGTTGTTAAAACTCCTTTCAGGATCAGATCATCTCTaGTCACTACAGGAGAAGAGTTTGGAGGAAGAGACATTGATACCA | + |
|
Preference number: 5 (lower is better) Translates to: SNLLLLKLLSGSDHL*SLQEKSLEEETLIP Trigger: TGGTATCAATGTCTCTTCCTCCAAACTCTTCTCCTGTAGTGAGCAGAGATGATCTGATCCTGAAAGGAGTTTTAACAACAGTAGGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS-3UTR CAA 90 bp | GAATTTAACCAAAGGACAAGATATAAAGAACCCTGTAGTATGGCCTCTTCTATACTTGGTTCTGGAGGTTaGGAGCTTCTTGGTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EFNQRTRYKEPCSMASSILGSGG*ELLGCV Trigger: CACACAACCAAGAAGCTCCAAACCTCCAGAACCAAG...TATAGAAGAGGCCATACTACAGGGTTCTTTATATCTTGTCCTTTGGTTAAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CAA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCTCCAGGTCAGTAATTTaGCACGGTGGAAACATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLDEEKNCMYLLNRGRICSRSVI*HGGNMS Trigger: TGACATGTTTCCACCGTGCAAAATTACTGACCTGGA...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CAA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCTTGGAGGAAGAGACATaGATACCAGGGCAATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLDEEKNCMYLLNRGRICLEEET*IPGQCL Trigger: CAAACATTGCCCTGGTATCAATGTCTCTTCCTCCAA...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CAA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCACATTATTGATCCAGTaGCATTCTGGGTGCTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLDEEKNCMYLLNRGRICTLLIQ*HSGCCC Trigger: ACAACAGCACCCAGAATGCAACTGGATCAATAATGT...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CAA 90 bp | TTACCTGTAAAGCCTCATGGGAGCCGTAACCATTTTCATTCAATACTTCCAAGCCTATCAAACCTACTGTaGTTAAAACTCCTTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPVKPHGSRNHFHSILPSLSNLL*LKLLSG Trigger: TCCTGAAAGGAGTTTTAACAACAGTAGGTTTGATAG...GCTTGGAAGTATTGAATGAAAATGGTTACGGCTCCCATGAGGCTTTACAGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CAA 90 bp | TGTTGTGTTATTGAGCTGTCTCTAGCTTTTGCTTTAACTAGTGAAGCTTTTTGTGAGGTTTGGAGCTTCTaGGTTGTGTGTACTTTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: CCVIELSLAFALTSEAFCEVWSF*VVCTFV Trigger: AACGAAAGTACACACAACCAAGAAGCTCCAAACCTC...ACAAAAAGCTTCACTAGTTAAAGCAAAAGCTAGAGACAGCTCAATAACACAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198993.2 |
||
| CDS-3UTR CAA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCATAAAGTCACCAGTGTaGTATTTTCTTCCGCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLDEEKNCMYLLNRGRICIKSPV*YFLPLG Trigger: TCCTAGCGGAAGAAAATACAACACTGGTGACTTTAT...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS-3UTR CAA 90 bp | GTCCTTGATGAAGAAAAGAATTGCATGTACTTATTAAACCGGGGCAGAATTTGCCCTTCCCTAAAAATCTaGCTAATAATGCAGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLDEEKNCMYLLNRGRICPSLKI*LIMQSS Trigger: TGAAGACTGCATTATTAGCAAGATTTTTAGGGAAGG...GCAAATTCTGCCCCGGTTTAATAAGTACATGCAATTCTTTTCTTCATCAAGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS CAA 90 bp | CATGGCCAGGCTGGAGGCACGAGAGGCCACTGTCACTTTCAGAGCTaGGGGAGAATGGTGGGTGTTGTTCAGCGTGTAAGTCCAGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HGQAGGTRGHCHFQS*GRMVGVVQRVSPVP Trigger: GGGCACTGGACTTACACGCTGAACAACACCCACCATTCTCCCCAAGCTCTGAAAGTGACAGTGGCCTCTCGTGCCTCCAGCCTGGCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
||
| CDS CCA 72 bp | GGTTTCCTGGGACAGGGAGGGCTAGTGTGCTTGTGCTaGGAGAGTGACGGACATGCACTGTCAGGCTATAGC | + |
|
Preference number: 6 (lower is better) Translates to: GFLGQGGLVCLC*ESDGHALSGYS Trigger: GCTATAGCCTGACAGTGCATGTCCGTCACTCTCCCAGCACAAGCACACTAGCCCTCCCTGTCCCAGGAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS GCA 72 bp | CATGGTTTCCTGGGACAGGGAGGGCTAGTGTGCTTGTaGTGGGAGAGTGACGGACATGCACTGTCAGGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: HGFLGQGGLVCL*WESDGHALSGY Trigger: ATAGCCTGACAGTGCATGTCCGTCACTCTCCCAGCACAAGCACACTAGCCCTCCCTGTCCCAGGAAACCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
||
| CDS CAA 72 bp | CCAGCCTCTGGTTCCACTGTCGCCACCACGGTGGCATaGAGAATGGGATGCAGACCTTTCCTCACATTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PASGSTVATTVA*RMGCRPFLTFA Trigger: TGCGAATGTGAGGAAAGGTCTGCATCCCATTCTCAATGCCACCGTGGTGGCGACAGTGGAACCAGAGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
||
| CDS TCA 72 bp | CGTTTCTGCGTCAGTGGACACGGCGGTCGGCAGGTATaGAACCAGCAGCTTCCGGTCATCGTCACTGTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: RFCVSGHGGRQV*NQQLPVIVTVN Trigger: ATTTACAGTGACGATGACCGGAAGCTGCTGGTTTCATACCTGCCGACCGCCGTGTCCACTGACGCAGAAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS TCA 72 bp | CAGCCTCTGGTTCCACTGTCGCCACCACGGTGGCATTaGGAATGGGATGCAGACCTTTCCTCACATTCGCAT | + |
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Preference number: 6 (lower is better) Translates to: QPLVPLSPPRWH*EWDADLSSHSH Trigger: ATGCGAATGTGAGGAAAGGTCTGCATCCCATTCTCAATGCCACCGTGGTGGCGACAGTGGAACCAGAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS GCA 72 bp | GCTTGTAGTTTGCCCCTGATCGAAGTCTTCCCCAGGTaGCGTCCAAGAGAGGACGACGTCGTCTTCCACTTT | + |
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Preference number: 6 (lower is better) Translates to: ACSLPLIEVFPR*RPREDDVVFHF Trigger: AAAGTGGAAGACGACGTCGTCCTCTCTTGGACGGCACCTGGGGAAGACTTCGATCAGGGGCAAACTACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS CCA 72 bp | GCTAACTCATCGTTGAGTAGGAAGCTGGGGGTGAAGTaGATGTATCTCCCCTCTTGCCCACACCCTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: ANSSLSRKLGVK*MYLPSCPHPLC Trigger: GCACAGAGGGTGTGGGCAAGAGGGGAGATACATCCACTTCACCCCCAGCTTCCTACTCAACGATGAGTTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS CCA 72 bp | TCGTTGTTATATTCATCGAACACACCCCAGCGGAGATaGGCCCACTCGTGGACAAACACTCTGCCTCGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SLLYSSNTPQRR*AHSWTNTLPRA Trigger: TGCGCGAGGCAGAGTGTTTGTCCACGAGTGGGCCCATCTCCGCTGGGGTGTGTTCGATGAATATAACAACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS CCA 72 bp | CAGCGTGTAAGTCCAGTGCCCATGCTTAGCTGTCCCTaGAATCTTAAGGCTGGCTGTCCGAAAGGCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: QRVSPVPMLSCP*NLKAGCPKGQV Trigger: AACCTGGCCTTTCGGACAGCCAGCCTTAAGATTCCAGGGACAGCTAAGCATGGGCACTGGACTTACACGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS CAA 72 bp | GCTGGAGGCACGAGAGGCCACTGTCACTTTCAGAGCTaGGGGAGAATGGTGGGTGTTGTTCAGCGTGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: AGGTRGHCHFQS*GRMVGVVQRVS Trigger: ACTTACACGCTGAACAACACCCACCATTCTCCCCAAGCTCTGAAAGTGACAGTGGCCTCTCGTGCCTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS CAA 72 bp | CCACCAGTCTGCCACGTGACTAGAAAAAGTGTGTCATaGCCCACGGCGCTATCCACAGTCATAGTATCCGCC | + |
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Preference number: 6 (lower is better) Translates to: PPVCHVTRKSVS*PTALSTVIVSA Trigger: GGCGGATACTATGACTGTGGATAGCGCCGTGGGCAATGACACACTTTTTCTAGTCACGTGGCAGACTGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS CAA 90 bp | AGTGTGAGCTTCGACAACCTGCATCAAGTACAGTTCGGCTGCTTGTaGAAGTCGGAGCAGTCTGTCTCCCTCTGCCATCTTCCTGGACAC | + |
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Preference number: 6 (lower is better) Translates to: SVSFDNLHQVQFGCL*KSEQSVSLCHLPGH Trigger: GTGTCCAGGAAGATGGCAGAGGGAGACAGACTGCTCCGACTTCAACAAGCAGCCGAACTGTACTTGATGCAGGTTGTCGAAGCTCACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS TCA 72 bp | TCGACAACCTGCATCAAGTACAGTTCGGCTGCTTGTTaGAGTCGGAGCAGTCTGTCTCCCTCTGCCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: STTCIKYSSAAC*SRSSLSPSAIF Trigger: GAAGATGGCAGAGGGAGACAGACTGCTCCGACTTCAACAAGCAGCCGAACTGTACTTGATGCAGGTTGTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS CAA 90 bp | GAAAGTGTGAGCTTCGACAACCTGCATCAAGTACAGTTCGGCTGCTaGTTGAAGTCGGAGCAGTCTGTCTCCCTCTGCCATCTTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ESVSFDNLHQVQFGC*LKSEQSVSLCHLPG Trigger: TCCAGGAAGATGGCAGAGGGAGACAGACTGCTCCGACTTCAACAAGCAGCCGAACTGTACTTGATGCAGGTTGTCGAAGCTCACACTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS CAA 90 bp | CCCATCATTTCTTATAACATCTGCACCTGCTCCGCCATCCAAAAGTaGCAGTACAACGGGATCTCCAGCCTCTGGTTCCACTGTCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PIISYNICTCSAIQK*QYNGISSLWFHCRH Trigger: GTGGCGACAGTGGAACCAGAGGCTGGAGATCCCGTTGTACTGCAACTTTTGGATGGCGGAGCAGGTGCAGATGTTATAAGAAATGATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS TCA 72 bp | ACATTGATACCAGGGCAATGTTTGACACAGCTGACCTaGGGGAGCTTCTATCCATGGCTCTCAGGGCCACAT | + |
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Preference number: 6 (lower is better) Translates to: TLIPGQCLTQLT*GSFYPWLSGPH Trigger: ATGTGGCCCTGAGAGCCATGGATAGAAGCTCCCTCAGGTCAGCTGTGTCAAACATTGCCCTGGTATCAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS GCA 72 bp | CTTATAACATCTGCACCTGCTCCGCCATCCAAAAGTTaGAGTACAACGGGATCTCCAGCCTCTGGTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: LITSAPAPPSKS*STTGSPASGST Trigger: AGTGGAACCAGAGGCTGGAGATCCCGTTGTACTGCAACTTTTGGATGGCGGAGCAGGTGCAGATGTTATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS CAA 72 bp | TTCGACAACCTGCATCAAGTACAGTTCGGCTGCTTGTaGAAGTCGGAGCAGTCTGTCTCCCTCTGCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: FDNLHQVQFGCL*KSEQSVSLCHL Trigger: AAGATGGCAGAGGGAGACAGACTGCTCCGACTTCAACAAGCAGCCGAACTGTACTTGATGCAGGTTGTCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS TCA 72 bp | GCAGCGAGGCTCGGATTTCTCCTTTGCTATCAAAAGTaGCAATGCCCACGAAAGTGTGAGCTTCGACAACCT | + |
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Preference number: 6 (lower is better) Translates to: AARLGFLLCYQK*QCPRKCELRQP Trigger: AGGTTGTCGAAGCTCACACTTTCGTGGGCATTGTCACTTTTGATAGCAAAGGAGAAATCCGAGCCTCGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS TCA 72 bp | GGTGAGAATGTAAATGTCTCCCTGGTGCCAGCATGCTaGGGAACTAGCTCTGACGAATTCACCAAGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: GENVNVSLVPAC*GTSSDEFTKMA Trigger: TGCCATCTTGGTGAATTCGTCAGAGCTAGTTCCTCAGCATGCTGGCACCAGGGAGACATTTACATTCTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS CAA 90 bp | TTAGCTGTCCCTGGAATCTTAAGGCTGGCTGTCCGAAAGGCCAGGTaGATGATAAAGTCACCAGTGTTGTATTTTCTTCCGCTAGGATCC | + |
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Preference number: 6 (lower is better) Translates to: LAVPGILRLAVRKAR*MIKSPVLYFLPLGS Trigger: GGATCCTAGCGGAAGAAAATACAACACTGGTGACTTTATCATCAACCTGGCCTTTCGGACAGCCAGCCTTAAGATTCCAGGGACAGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS TCA 72 bp | CCTTTGCTATCAAAAGTGACAATGCCCACGAAAGTGTaGGCTTCGACAACCTGCATCAAGTACAGTTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: PLLSKVTMPTKV*ASTTCIKYSSA Trigger: AGCCGAACTGTACTTGATGCAGGTTGTCGAAGCTCACACTTTCGTGGGCATTGTCACTTTTGATAGCAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS TCA 72 bp | AAGTTCATGATCAAGTTCATGGGTGACAAGCTTGGGTaGGAATGTAAATGTCTCCCTGGTGCCAGCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: KFMIKFMGDKLG*ECKCLPGASML Trigger: CAGCATGCTGGCACCAGGGAGACATTTACATTCTCACCCAAGCTTGTCACCCATGAACTTGATCATGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040465.11 |
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| CDS GCA 72 bp | TGCACAGTTTCGCACACGCTCTCAACCTGTAAGCTTTaGTGGAAAATGTCTCCTGTTCCAGAAGAGATTCGA | + |
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Preference number: 6 (lower is better) Translates to: CTVSHTLSTCKL*WKMSPVPEEIR Trigger: TCGAATCTCTTCTGGAACAGGAGACATTTTCCAGCAAAGCTTACAGGTTGAGAGCGTGTGCGAAACTGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS CCA 72 bp | AGTGCTTCTGAGGCTGCACACTTGGTTCTGGAGGTTTaGAGCTTCTTGGTTGTGTGTACTTTCGTTACAGAA | + |
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Preference number: 6 (lower is better) Translates to: SASEAAHLVLEV*SFLVVCTFVTE Trigger: TTCTGTAACGAAAGTACACACAACCAAGAAGCTCCAAACCTCCAGAACCAAGTGTGCAGCCTCAGAAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS CAA 72 bp | CCTGGAATCTTAAGGCTGGCTGTCCGAAAGGCCAGGTaGATGATAAAGTCACCAGTGTTGTATTTTCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: PGILRLAVRKAR*MIKSPVLYFLP Trigger: CGGAAGAAAATACAACACTGGTGACTTTATCATCAACCTGGCCTTTCGGACAGCCAGCCTTAAGATTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS GCA 72 bp | GGAGTAAATCCCATCATTTCTTATAACATCTGCACCTaGTCCGCCATCCAAAAGTTGCAGTACAACGGGATC | + |
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Preference number: 6 (lower is better) Translates to: GVNPIISYNICT*SAIQKLQYNGI Trigger: GATCCCGTTGTACTGCAACTTTTGGATGGCGGAGCAGGTGCAGATGTTATAAGAAATGATGGGATTTACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS TCA 72 bp | GCCCTTTTCACACACAAAAACGCCTGTAATGTCAGATaGACACCTGGTGACTTGAATCTCATTCCGTCCATT | + |
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Preference number: 6 (lower is better) Translates to: ALFTHKNACNVR*TPGDLNLIPSI Trigger: AATGGACGGAATGAGATTCAAGTCACCAGGTGTTCATCTGACATTACAGGCGTTTTTGTGTGTGAAAAGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS TCA 72 bp | GAATGGGATGCAGACCTTTCCTCACATTCGCATAAATaGTCACTGGCTGAGGAAAATAGGTGCTGTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: EWDADLSSHSHK*SLAEENRCCLF Trigger: AAAGAGACAGCACCTATTTTCCTCAGCCAGTGATCATTTATGCGAATGTGAGGAAAGGTCTGCATCCCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS GCA 72 bp | TCCGTGTTCCTCACTCTGCTCAGCCACTATGACATTTaGCTTGTCATAGGATTCTTGTCTTACTCTACTGTA | + |
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Preference number: 6 (lower is better) Translates to: SVFLTLLSHYDI*LVIGFLSYSTV Trigger: TACAGTAGAGTAAGACAAGAATCCTATGACAAGGCAAATGTCATAGTGGCTGAGCAGAGTGAGGAACACGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS CAA 72 bp | GTCCGAAAGGCCAGGTTGATGATAAAGTCACCAGTGTaGTATTTTCTTCCGCTAGGATCCAATAATGCAATC | + |
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Preference number: 6 (lower is better) Translates to: VRKARLMIKSPV*YFLPLGSNNAI Trigger: GATTGCATTATTGGATCCTAGCGGAAGAAAATACAACACTGGTGACTTTATCATCAACCTGGCCTTTCGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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| CDS CAA 72 bp | CTCAGCCACTATGACATTTGCCTTGTCATAGGATTCTaGTCTTACTCTACTGTAATTATGATCCGTCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: LSHYDICLVIGF*SYSTVIMIRPS Trigger: ACTTGGACGGATCATAATTACAGTAGAGTAAGACAAGAATCCTATGACAAGGCAAATGTCATAGTGGCTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040465.11 ENSMUST00000198993.2 |
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