Pregenerated sensors for CLCA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028255Ensembl transcript IDs: ENSMUST00000029919.7
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTTTGAATACAAGTGGCTCCCATAGGCTCCCATATTTAAGCGCTTaGTCCTTTGCTGGTAGAACTGTTTTGGGAAGATTAGGCAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: GLNTSGSHRLPYLSA*SFAGRTVLGRLGKA Trigger: GGCCTTGCCTAATCTTCCCAAAACAGTTCTACCAGCAAAGGACCAAGCGCTTAAATATGGGAGCCTATGGGAGCCACTTGTATTCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| 3UTR CCA 72 bp | ACAAGTGGCTCCCATAGGCTCCCATATTTAAGCGCTTaGTCCTTTGCTGGTAGAACTGTTTTGGGAAGATTA | + |
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Preference number: 3 (lower is better) Translates to: TSGSHRLPYLSA*SFAGRTVLGRL Trigger: TAATCTTCCCAAAACAGTTCTACCAGCAAAGGACCAAGCGCTTAAATATGGGAGCCTATGGGAGCCACTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | TTTGGGAAGATTAGGCAAGGCCTTTGGAAAAGGTATTTCACTAGGGGTGAGAGACCGACCCAGGATCCCTaGTCCACAGTCTGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FGKIRQGLWKRYFTRGERPTQDP*STVCSR Trigger: CCTGCTGCAGACTGTGGAGCAGGGATCCTGGGTCGG...TCTCTCACCCCTAGTGAAATACCTTTTCCAAAGGCCTTGCCTAATCTTCCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCAGGAATGGGAGCTGCTaGGGGGACATTGGTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LLIQATLASIQITIQRPSRNGSC*GDIGGH Trigger: GTGGCCACCAATGTCCCCGCAGCAGCTCCCATTCCT...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCGTGGGTGCAGGTGGCTaGGCTGTCATGGGAGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LLIQATLASIQITIQRPSVGAGG*AVMGVV Trigger: AACCACTCCCATGACAGCCCAGCCACCTGCACCCAC...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | TTTGGGAAGATTAGGCAAGGCCTTTGGAAAAGGTATTTCACTAGGGGTGAGAGAAACCTTAGCCGTGCCTaGGACTTGGAGGTAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FGKIRQGLWKRYFTRGERNLSRA*DLEVGH Trigger: GTGGCCTACCTCCAAGTCCCAGGCACGGCTAAGGTT...TCTCTCACCCCTAGTGAAATACCTTTTCCAAAGGCCTTGCCTAATCTTCCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | CTGACTGAGTTCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCGAAGGTGGGTGCAGGTaGCTGGGCTGTCATGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LTEFLRTNSNLLPSSDTSEGGCR*LGCHGS Trigger: ACTCCCATGACAGCCCAGCCACCTGCACCCACCTTC...GCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGAACTCAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | CTGACTGAGTTCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCGATCGCCGCATTTCCTaGGGAGAGTGCTGCGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LTEFLRTNSNLLPSSDTSDRRIS*GECCES Trigger: GCTTTCGCAGCACTCTCCTCAGGAAATGCGGCGATC...GCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGAACTCAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGAGGACAAGGGGGAGTTaGGTCTTCGGGAATGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKRTRGS*VFGNGR Trigger: CCGCCCATTCCCGAAGACTCAACTCCCCCTTGTCCT...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCGAAACAAGGTGTCCTTaGCCACCGAGCTGTCCACGA | + |
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Preference number: 4 (lower is better) Translates to: LLIQATLASIQITIQRPSETRCP*PPSCPR Trigger: TCGTGGACAGCTCGGTGGGCAAGGACACCTTGTTTC...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGTGCTCTCCAGCTGGATaGAGTGCTGAGCGATCGCCG | + |
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Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKCSPAG*SAERSP Trigger: CGGCGATCGCTCAGCACTCCATCCAGCTGGAGAGCA...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | TTTGGGAAGATTAGGCAAGGCCTTTGGAAAAGGTATTTCACTAGGGGTGAGAGAGAGTCAGGTGAATCCTaGTCCCCTTTTCTCCACATG | + |
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Preference number: 4 (lower is better) Translates to: FGKIRQGLWKRYFTRGERESGES*SPFLHM Trigger: CATGTGGAGAAAAGGGGATCAGGATTCACCTGACTC...TCTCTCACCCCTAGTGAAATACCTTTTCCAAAGGCCTTGCCTAATCTTCCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAACCGGTAATGGCTGCTaGACACCTCACTGCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SLGQIQIYSHLLIQATLATGNGC*TPHCLG Trigger: CCCCAAGCAGTGAGGTGTTCAGCAGCCATTACCGGT...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCCACAAACGATCCCCCTaGAGATGTCCTGCTGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LLIQATLASIQITIQRPSHKRSP*RCPAEA Trigger: TGCTTCAGCAGGACATCTTCAGGGGGATCGTTTGTG...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | CTGACTGAGTTCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAGGCAGTGTAGCACTTaGTGCACGGGAGGTGACAGT | + |
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Preference number: 4 (lower is better) Translates to: LTEFLRTNSNLLPSSDTSRQCST*CTGGDS Trigger: ACTGTCACCTCCCGTGCAGCAAGTGCTACACTGCCT...GCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGAACTCAGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGTCCAATTTGCAGCAGTaGGAAGGTGGGTGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKSNLQQ*EGGCRW Trigger: CCACCTGCACCCACCTTCTCACTGCTGCAAATTGGA...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCCTGTGGGTAAGTGCTTaGTCAGCAGATCTCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LLIQATLASIQITIQRPSLWVSA*SADLCQ Trigger: CTGACAGAGATCTGCTGATCAAGCACTTACCCACAG...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | TTTGGGAAGATTAGGCAAGGCCTTTGGAAAAGGTATTTCACTAGGGGTGAGAGAAAGTCCTCAGATTCCTaGATGACTTCCCACGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: FGKIRQGLWKRYFTRGERKSSDS*MTSHVL Trigger: AAGCACGTGGGAAGTCATCCAGGAATCTGAGGACTT...TCTCTCACCCCTAGTGAAATACCTTTTCCAAAGGCCTTGCCTAATCTTCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCGGCCTCCTGTCATTTTaGACAGCTGCTCAAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLIQATLASIQITIQRPSGLLSF*TAAQAL Trigger: AAGAGCTTGAGCAGCTGTCCAAAATGACAGGAGGCC...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAGAAAGAGGTCAGGAATaGGAGCTGCTGCGGGGACAT | + |
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Preference number: 4 (lower is better) Translates to: SLGQIQIYSHLLIQATLAERGQE*ELLRGH Trigger: ATGTCCCCGCAGCAGCTCCCATTCCTGACCTCTTTC...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCCCTTTATGTGTTGAATaGGGGCTTCATCTTCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: LLIQATLASIQITIQRPSPLCVE*GLHLPA Trigger: TGCCGGAAGATGAAGCCCTCATTCAACACATAAAGG...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCAAGTCAGGAGTCAGGTaGATCCTGATCCCCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLIQATLASIQITIQRPSKSGVR*ILIPFS Trigger: AGAAAAGGGGATCAGGATTCACCTGACTCCTGACTT...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | CTGACTGAGTTCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCTGGGAGTGGTTTGCTTaGAGTCCTCAGATTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LTEFLRTNSNLLPSSDTSWEWFA*SPQIPG Trigger: TCCAGGAATCTGAGGACTTCAAGCAAACCACTCCCA...GCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGAACTCAGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | TTTGGGAAGATTAGGCAAGGCCTTTGGAAAAGGTATTTCACTAGGGGTGAGAGACCCCTTTTCTCCACATaGTCCTATATGTTCGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: FGKIRQGLWKRYFTRGERPLFST*SYMFGV Trigger: TACACCGAACATATAGGAGCATGTGGAGAAAAGGGG...TCTCTCACCCCTAGTGAAATACCTTTTCCAAAGGCCTTGCCTAATCTTCCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCTCCGAAGAGTATGTCTaGAGGCCTCCTGTCATTTTG | + |
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Preference number: 4 (lower is better) Translates to: LLIQATLASIQITIQRPSSEEYV*RPPVIL Trigger: CAAAATGACAGGAGGCCTGCAGACATACTCTTCGGA...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGAGATTCACCAGGTTCTaGCCTTGGATGCTGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKRFTRF*PWMLAF Trigger: GAAGGCCAGCATCCAAGGGCAGAACCTGGTGAATCT...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCATTATCTTCAGCACGTaGATGCCAGGAATGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLIQATLASIQITIQRPSIIFST*MPGMVL Trigger: CAGCACCATTCCTGGCATCCACGTGCTGAAGATAAT...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGAGGTATGGAGAGGCCTaGGTCACCATGTCCTTTATG | + |
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Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKRYGEA*VTMSFM Trigger: CATAAAGGACATGGTGACTCAGGCCTCTCCATACCT...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGTGTTCACTTGGAGTaGGGTGTTGAAGTGGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SLGQIQIYSHLLIQATLASVHLE*GVEVVP Trigger: AGGGACCACTTCAACACCTCACTCCAAGTGAACACT...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCATGTAGGGCTCATCATTaGCTAGAGGGCTGGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SLGQIQIYSHLLIQATLACRAHH*LEGWLL Trigger: CAACAACCAGCCCTCTAGGCAATGATGAGCCCTACA...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | CTGACTGAGTTCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAGCCATCTATGTACATaGCTCTGTTCTTCGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LTEFLRTNSNLLPSSDTSSHLCT*LCSSEV Trigger: CACCTCCGAAGAACAGAGCCATGTACATAGATGGCT...GCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGAACTCAGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCACGTATATTCAGGCTTTaGCTTCCAGCTCTCGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SLGQIQIYSHLLIQATLARIFRL*LPALGN Trigger: ATTCCCGAGAGCTGGAAGGCAAAGCCTGAATATACG...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGGTCATTTTGGACAGCTaGTCAAGCTCTTTAGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKVILDS*SSSLAA Trigger: TGCCGCTAAAGAGCTTGAGCAGCTGTCCAAAATGAC...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGAGGCTCCTTGGCGAATaGTTGCATACACTGTTACAG | + |
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Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKRLLGE*LHTLLQ Trigger: CTGTAACAGTGTATGCAAGCATTCGCCAAGGAGCCT...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAACTCCTTCCAGAAGGTaGAGGATCAAGAGGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: SLGQIQIYSHLLIQATLATPSRR*RIKRKT Trigger: TGTCTTCCTCTTGATCCTCCACCTTCTGGAAGGAGT...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCACTAGTTTCAGGACGTaGTGGGTTCATTCTTACTTC | + |
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Preference number: 4 (lower is better) Translates to: LLIQATLASIQITIQRPSTSFRT*WVHSYF Trigger: GAAGTAAGAATGAACCCACCACGTCCTGAAACTAGT...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGAGTGATTTGACAGGGTaGAAAGAGGTCAGGAATGGG | + |
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Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKSDLTG*KEVRNG Trigger: CCCATTCCTGACCTCTTTCCACCCTGTCAAATCACT...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| 3UTR CAA 72 bp | TATTTAAGCGCTTGGTCCTTTGCTGGTAGAACTGTTTaGGGAAGATTAGGCAAGGCCTTTGGAAAAGGTATT | + |
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Preference number: 4 (lower is better) Translates to: YLSAWSFAGRTV*GRLGKAFGKGI Trigger: AATACCTTTTCCAAAGGCCTTGCCTAATCTTCCCAAAACAGTTCTACCAGCAAAGGACCAAGCGCTTAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAGGACATCAGCGTTTTTaGAGGTTTCAAGTTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SLGQIQIYSHLLIQATLAGHQRF*RFQVLA Trigger: GGCCAAAACTTGAAACCTTCAAAAACGCTGATGTCC...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAGTCTGTGAGCTCGCTTaGATGCTGTATTTCCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: SLGQIQIYSHLLIQATLAVCELA*MLYFQK Trigger: CTTTTGGAAATACAGCATTCAAGCGAGCTCACAGAC...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGCTTTATCACTGTAAATaGTGTCCGAAGGCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKLYHCK*CPKARA Trigger: TGCTCTGGCCTTCGGACAGCATTTACAGTGATAAAG...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAGAACACCTCACTGCTTaGGGTTTTCCTTTGGATAAG | + |
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Preference number: 4 (lower is better) Translates to: SLGQIQIYSHLLIQATLAEHLTA*GFPLDK Trigger: CTTATCCAAAGGAAAACCCCAAGCAGTGAGGTGTTC...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | TTTGGGAAGATTAGGCAAGGCCTTTGGAAAAGGTATTTCACTAGGGGTGAGAGATTGGTTTTGGTCATTTaGGGCTTCTTGATTGTGATT | + |
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Preference number: 4 (lower is better) Translates to: FGKIRQGLWKRYFTRGERLVLVI*GFLIVI Trigger: AATCACAATCAAGAAGCCCCAAATGACCAAAACCAA...TCTCTCACCCCTAGTGAAATACCTTTTCCAAAGGCCTTGCCTAATCTTCCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | CTGACTGAGTTCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCATCCATTGGTTATTCTaGAGATTAACTCCCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LTEFLRTNSNLLPSSDTSIHWLF*RLTPLL Trigger: GAGCAGGGGAGTTAATCTCCAGAATAACCAATGGAT...GCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGAACTCAGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGTTTCAGGACGTGGTaGGTTCATTCTTACTTCACC | + |
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Preference number: 4 (lower is better) Translates to: SLGQIQIYSHLLIQATLASFRTW*VHSYFT Trigger: GGTGAAGTAAGAATGAACCCACCACGTCCTGAAACT...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGGTGAGCTCGCTTGAATaGTGTATTTCCAAAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKVSSLE*CISKSQ Trigger: TTGGCTTTTGGAAATACAGCATTCAAGCGAGCTCAC...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR TCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGCACTGTTTAACTGTTTaGGTTCGCTTTGTACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKHCLTV*VRFVHR Trigger: CCTATGTACAAAGCGAACTCAAACAGTTAAACAGTG...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR GCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGCATTTCCAAAAGTGTTaGCTCCCAGTTCAAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKHFQKC*LPVQTQ Trigger: TTGAGTTTGAACTGGGAGGCAACACTTTTGGAAATG...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCACTTGGGGTTTTCCTTTaGATAAGTAGAACTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLGQIQIYSHLLIQATLALGVFL*ISRTSR Trigger: ACGAGAAGTTCTACTTATCCAAAGGAAAACCCCAAG...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAGACTTATCCACAGCCTaGATAGCAATGAAGATATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLGQIQIYSHLLIQATLADLSTA*IAMKIS Trigger: AGATATCTTCATTGCTATCCAGGCTGTGGATAAGTC...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CCA 90 bp | CTGACTGAGTTCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCTTCAGATCCATCAGTTaGATACTTCTTCTTTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTEFLRTNSNLLPSSDTSFRSIS*ILLLYH Trigger: GTGATAAAGAAGAAGTATCCAACTGATGGATCTGAA...GCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGAACTCAGTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
||
| CDS-3UTR CCA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGGAGCCATTCATCCATTaGTTATTCTGGAGATTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKEPFIH*LFWRLT Trigger: AGTTAATCTCCAGAATAACCAATGGATGAATGGCTC...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| 3UTR CAA 72 bp | TTAATTAAGCTCATATTTGTAAGCTGTTGTGGTGGTTaGAATACAAGTGGCTCCCATAGGCTCCCATATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LIKLIFVSCCGG*NTSGSHRLPYL Trigger: TAAATATGGGAGCCTATGGGAGCCACTTGTATTCAAACCACCACAACAGCTTACAAATATGAGCTTAATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS GCA 90 bp | GCGGCAGCCGGTCCCAGGGCCACTGTATGGATGATGGCCCCGCTCTaGTTCACCAGGTCAAAGCAGCTGCTAATGGTGTTGTCCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAGPRATVWMMAPL*FTRSKQLLMVLSSP Trigger: TGGGGAGGACAACACCATTAGCAGCTGCTTTGACCTGGTGAAGCAGAGCGGGGCCATCATCCATACAGTGGCCCTGGGACCGGCTGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 90 bp | GCCAGGAATGGTGCTGTTGATGCTGATGTCAGGACAAGGGGGAGTTaGGTCTTCGGGAATGGGCGGCTCCTGAGCGGGGATGAACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ARNGAVDADVRTRGS*VFGNGRLLSGDEHR Trigger: TCTGTGTTCATCCCCGCTCAGGAGCCGCCCATTCCCGAAGACTCAACTCCCCCTTGTCCTGACATCAGCATCAACAGCACCATTCCTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 90 bp | GTTCTGCCCTTGGATGCTGGCCTTCAGGTCAGTGATTTGACAGGGTaGAAAGAGGTCAGGAATGGGAGCTGCTGCGGGGACATTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLPLDAGLQVSDLTG*KEVRNGSCCGDIGG Trigger: GCCACCAATGTCCCCGCAGCAGCTCCCATTCCTGACCTCTTTCCACCCTGTCAAATCACTGACCTGAAGGCCAGCATCCAAGGGCAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 90 bp | ATGTCAGGACAAGGGGGAGTTGAGTCTTCGGGAATGGGCGGCTCCTaGGCGGGGATGAACACAGACACCCGTGCAATGTTGGAGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MSGQGGVESSGMGGS*AGMNTDTRAMLEIS Trigger: AGAAATCTCCAACATTGCACGGGTGTCTGTGTTCATCCCCGCTCAGGAGCCGCCCATTCCCGAAGACTCAACTCCCCCTTGTCCTGACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 90 bp | CCTGCTCTCCAGCTGGATGGAGTGCTGAGCGATCGCCGCATTTCCTaGGGAGAGTGCTGCGAAAGCATCAACAAGACCATTGTTCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PALQLDGVLSDRRIS*GECCESINKTIVLN Trigger: GTTCAGAACAATGGTCTTGTTGATGCTTTCGCAGCACTCTCCTCAGGAAATGCGGCGATCGCTCAGCACTCCATCCAGCTGGAGAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 90 bp | GCTGCACGGGAGGTGACAGTCAAGGTGAGAGTCTGTGAGCTCGCTTaGATGCTGTATTTCCAAAAGCCAACCTTAGCCGTGCCTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: AAREVTVKVRVCELA*MLYFQKPTLAVPGT Trigger: AGTCCCAGGCACGGCTAAGGTTGGCTTTTGGAAATACAGCATTCAAGCGAGCTCACAGACTCTCACCTTGACTGTCACCTCCCGTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 90 bp | TCAATCAAGGCTGTGACGCTGGCCCTGAGAATAGGCGAGGCTCCTTaGCGAATGCTTGCATACACTGTTACAGGGCTGGGGAATTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SIKAVTLALRIGEAP*RMLAYTVTGLGNFP Trigger: AGGGAAATTCCCCAGCCCTGTAACAGTGTATGCAAGCATTCGCCAAGGAGCCTCGCCTATTCTCAGGGCCAGCGTCACAGCCTTGATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 90 bp | TTATTCTGGAGATTAACTCCCCTGCTCTCCAGCTGGATGGAGTGCTaGGCGATCGCCGCATTTCCTGAGGAGAGTGCTGCGAAAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LFWRLTPLLSSWMEC*AIAAFPEESAAKAS Trigger: TGATGCTTTCGCAGCACTCTCCTCAGGAAATGCGGCGATCGCTCAGCACTCCATCCAGCTGGAGAGCAGGGGAGTTAATCTCCAGAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS GCA 90 bp | TGTGACGCTGGCCCTGAGAATAGGCGAGGCTCCTTGGCGAATGCTTaGATACACTGTTACAGGGCTGGGGAATTTCCCTGTGTTCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: CDAGPENRRGSLANA*IHCYRAGEFPCVLI Trigger: AATAAGAACACAGGGAAATTCCCCAGCCCTGTAACAGTGTATGCAAGCATTCGCCAAGGAGCCTCGCCTATTCTCAGGGCCAGCGTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 90 bp | GTCACCTGCATTTCCCCTAGCCACTTCCACATTATCTTCAGCACGTaGATGCCAGGAATGGTGCTGTTGATGCTGATGTCAGGACAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VTCISPSHFHIIFST*MPGMVLLMLMSGQG Trigger: CCCTTGTCCTGACATCAGCATCAACAGCACCATTCCTGGCATCCACGTGCTGAAGATAATGTGGAAGTGGCTAGGGGAAATGCAGGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 90 bp | TGTAGCACTTGCTGCACGGGAGGTGACAGTCAAGGTGAGAGTCTGTaGGCTCGCTTGAATGCTGTATTTCCAAAAGCCAACCTTAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: CSTCCTGGDSQGESL*ARLNAVFPKANLSR Trigger: ACGGCTAAGGTTGGCTTTTGGAAATACAGCATTCAAGCGAGCTCACAGACTCTCACCTTGACTGTCACCTCCCGTGCAGCAAGTGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | TTTGGGAAGATTAGGCAAGGCCTTTGGAAAAGGTATTTCACTAGGGGTGAGAGAAGCCGTGCCTGGGACTaGGAGGTAGGCCACCTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: FGKIRQGLWKRYFTRGERSRAWD*EVGHLS Trigger: ACTAAGGTGGCCTACCTCCAAGTCCCAGGCACGGCT...TCTCTCACCCCTAGTGAAATACCTTTTCCAAAGGCCTTGCCTAATCTTCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 90 bp | GATAAGAAACAAGGTGTCCTTGCCCACCGAGCTGTCCACGATCACTaGGCCATTCATCCATTGGTTATTCTGGAGATTAACTCCCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: DKKQGVLAHRAVHDH*AIHPLVILEINSPA Trigger: AGCAGGGGAGTTAATCTCCAGAATAACCAATGGATGAATGGCTCAGTGATCGTGGACAGCTCGGTGGGCAAGGACACCTTGTTTCTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 90 bp | TATGTACATGGCTCTGTTCTTCGGAGGTGCTGCTCTCTGTCTGTCTaGAGTGACTCCTCCCAGAGCCCATATTTTAACGCTGTATCTACC | + |
|
Preference number: 5 (lower is better) Translates to: YVHGSVLRRCCSLSV*SDSSQSPYFNAVST Trigger: GGTAGATACAGCGTTAAAATATGGGCTCTGGGAGGAGTCACTTCAGACAGACAGAGAGCAGCACCTCCGAAGAACAGAGCCATGTACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGGCTGCTGCGGGGACATaGGTGGCCACAAACGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKAAAGT*VATNDP Trigger: GGGATCGTTTGTGGCCACCAATGTCCCCGCAGCAGC...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | CTGACTGAGTTCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCCACCAGGTTCTGCCCTaGGATGCTGGCCTTCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTEFLRTNSNLLPSSDTSHQVLP*DAGLQV Trigger: GACCTGAAGGCCAGCATCCAAGGGCAGAACCTGGTG...GCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGAACTCAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 90 bp | CTGAGCGGGGATGAACACAGACACCCGTGCAATGTTGGAGATTTCTaGTTTCAGATTGGACTTATCCACAGCCTGGATAGCAATGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSGDEHRHPCNVGDF*FQIGLIHSLDSNED Trigger: ATCTTCATTGCTATCCAGGCTGTGGATAAGTCCAATCTGAAATCAGAAATCTCCAACATTGCACGGGTGTCTGTGTTCATCCCCGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGCAGCTGCTAATGGTGTaGTCCTCCCCATCGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKQLLMV*SSPSVS Trigger: GCTGACCGATGGGGAGGACAACACCATTAGCAGCTG...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | TTTGGGAAGATTAGGCAAGGCCTTTGGAAAAGGTATTTCACTAGGGGTGAGAGACCAGGAATGGTGCTGTaGATGCTGATGTCAGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: FGKIRQGLWKRYFTRGERPGMVL*MLMSGQ Trigger: TTGTCCTGACATCAGCATCAACAGCACCATTCCTGG...TCTCTCACCCCTAGTGAAATACCTTTTCCAAAGGCCTTGCCTAATCTTCCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 90 bp | CATTGCCTAGAGGGCTGGTTGTTGATACAAGGACATCAGCGTTTTTaGAGGTTTCAAGTTTTGGCCTCGTATATTCAGGCTTTGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HCLEGWLLIQGHQRF*RFQVLASYIQALPS Trigger: GGAAGGCAAAGCCTGAATATACGAGGCCAAAACTTGAAACCTTCAAAAACGCTGATGTCCTTGTATCAACAACCAGCCCTCTAGGCAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | CTGACTGAGTTCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCCACGTGCTTCGGAGATaGCATCGTTGGTTTTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTEFLRTNSNLLPSSDTSHVLRR*HRWFWS Trigger: TGACCAAAACCAACGATGCAATCTCCGAAGCACGTG...GCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGAACTCAGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | CTGACTGAGTTCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCATGGGAGTGGTTTGCTaGAAGTCCTCAGATTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTEFLRTNSNLLPSSDTSMGVVC*KSSDSW Trigger: CCAGGAATCTGAGGACTTCAAGCAAACCACTCCCAT...GCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGAACTCAGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCCTGTTTGAGTTCGCTTaGTACATAGGCAGCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLIQATLASIQITIQRPSLFEFA*YIGSTV Trigger: GACAGTGCTGCCTATGTACAAAGCGAACTCAAACAG...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | TTTGGGAAGATTAGGCAAGGCCTTTGGAAAAGGTATTTCACTAGGGGTGAGAGACCATTTCCAAAAGTGTaGCCTCCCAGTTCAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: FGKIRQGLWKRYFTRGERPFPKV*PPSSNS Trigger: TGAGTTTGAACTGGGAGGCAACACTTTTGGAAATGG...TCTCTCACCCCTAGTGAAATACCTTTTCCAAAGGCCTTGCCTAATCTTCCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCATCGTATATTCAGGCTTaGCCTTCCAGCTCTCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLGQIQIYSHLLIQATLASYIQA*PSSSRE Trigger: TTCCCGAGAGCTGGAAGGCAAAGCCTGAATATACGA...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | TTTGGGAAGATTAGGCAAGGCCTTTGGAAAAGGTATTTCACTAGGGGTGAGAGAAGGACATCAGCGTTTTaGAAGGTTTCAAGTTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FGKIRQGLWKRYFTRGERRTSAF*KVSSFG Trigger: GCCAAAACTTGAAACCTTCAAAAACGCTGATGTCCT...TCTCTCACCCCTAGTGAAATACCTTTTCCAAAGGCCTTGCCTAATCTTCCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCACTTCAGGTCAGTGATTaGACAGGGTGGAAAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLGQIQIYSHLLIQATLALQVSD*TGWKEV Trigger: GACCTCTTTCCACCCTGTCAAATCACTGACCTGAAG...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | CTTCTGATACAAGCAACACTTGCAAGCATTCAAATTACCATCCAAAGACCGAGCGACACCCGTGCAATGTaGGAGATTTCTGATTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLIQATLASIQITIQRPSDTRAM*EISDFR Trigger: TCTGAAATCAGAAATCTCCAACATTGCACGGGTGTC...GCTCGGTCTTTGGATGGTAATTTGAATGCTTGCAAGTGTTGCTTGTATCAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCATGTCATGGGAGTGGTTaGCTTGAAGTCCTCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: SLGQIQIYSHLLIQATLACHGSG*LEVLRF Trigger: GAATCTGAGGACTTCAAGCAAACCACTCCCATGACA...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 90 bp | GCAATGTTGGAGATTTCTGATTTCAGATTGGACTTATCCACAGCCTaGATAGCAATGAAGATATCTGTGCCATTTCCAAAAGTGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AMLEISDFRLDLSTA*IAMKISVPFPKVLP Trigger: AGGCAACACTTTTGGAAATGGCACAGATATCTTCATTGCTATCCAGGCTGTGGATAAGTCCAATCTGAAATCAGAAATCTCCAACATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAATTGCATCGTTGGTTTaGGTCATTTGGGGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLGQIQIYSHLLIQATLAIASLV*VIWGFL Trigger: CAAGAAGCCCCAAATGACCAAAACCAACGATGCAAT...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGCATGTCCTTTATGTGTaGAATGAGGGCTTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKHVLYV*NEGFIF Trigger: GAAGATGAAGCCCTCATTCAACACATAAAGGACATG...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS-3UTR CAA 90 bp | TCCTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAGTTGGTTTTGGTCATTaGGGGCTTCTTGATTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLGQIQIYSHLLIQATLAVGFGH*GLLDCD Trigger: ATCACAATCAAGAAGCCCCAAATGACCAAAACCAAC...TGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
||
| CDS CCA 90 bp | ATTTTGGTTAAACATGATGGAAGCCTTCTCGTTTTGGTGTGGATCTaGTACAAATACACAATTGTCTTTATACAGTCCCGTTACTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILVKHDGSLLVLVWI*YKYTIVFIQSRYSV Trigger: GACAGAGTAACGGGACTGTATAAAGACAATTGTGTATTTGTACCAGATCCACACCAAAACGAGAAGGCTTCCATCATGTTTAACCAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
||
| CDS-3UTR CAA 90 bp | CTTAGGACAAATTCAAATCTACTCCCATCTTCTGATACAAGCAACACTTGCAAGGGTACAAATACACAATaGTCTTTATACAGTCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRTNSNLLPSSDTSNTCKGTNTQ*SLYSPV Trigger: AACGGGACTGTATAAAGACAATTGTGTATTTGTACC...CTTGCAAGTGTTGCTTGTATCAGAAGATGGGAGTAGATTTGAATTTGTCCTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
||
| CDS CCA 90 bp | ATTGATATTTTGGTTAAACATGATGGAAGCCTTCTCGTTTTGGTGTaGATCTGGTACAAATACACAATTGTCTTTATACAGTCCCGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: IDILVKHDGSLLVLV*IWYKYTIVFIQSRY Trigger: GTAACGGGACTGTATAAAGACAATTGTGTATTTGTACCAGATCCACACCAAAACGAGAAGGCTTCCATCATGTTTAACCAAAATATCAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
||
| CDS CCA 90 bp | ACAGAATTGATATTTTGGTTAAACATGATGGAAGCCTTCTCGTTTTaGTGTGGATCTGGTACAAATACACAATTGTCTTTATACAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TELIFWLNMMEAFSF*CGSGTNTQLSLYSP Trigger: GGGACTGTATAAAGACAATTGTGTATTTGTACCAGATCCACACCAAAACGAGAAGGCTTCCATCATGTTTAACCAAAATATCAATTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
||
| CDS CCA 72 bp | GCTGTGACGCTGGCCCTGAGAATAGGCGAGGCTCCTTaGCGAATGCTTGCATACACTGTTACAGGGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AVTLALRIGEAP*RMLAYTVTGLG Trigger: CCCCAGCCCTGTAACAGTGTATGCAAGCATTCGCCAAGGAGCCTCGCCTATTCTCAGGGCCAGCGTCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 72 bp | GGCTGTGACGCTGGCCCTGAGAATAGGCGAGGCTCCTaGGCGAATGCTTGCATACACTGTTACAGGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GCDAGPENRRGS*ANACIHCYRAG Trigger: CCCAGCCCTGTAACAGTGTATGCAAGCATTCGCCAAGGAGCCTCGCCTATTCTCAGGGCCAGCGTCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | AGATTAACTCCCCTGCTCTCCAGCTGGATGGAGTGCTaGGCGATCGCCGCATTTCCTGAGGAGAGTGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: RLTPLLSSWMEC*AIAAFPEESAA Trigger: CGCAGCACTCTCCTCAGGAAATGCGGCGATCGCTCAGCACTCCATCCAGCTGGAGAGCAGGGGAGTTAATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS GCA 72 bp | GATTTGACAGGGTGGAAAGAGGTCAGGAATGGGAGCTaGTGCGGGGACATTGGTGGCCACAAACGATCCCCC | + |
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Preference number: 6 (lower is better) Translates to: DLTGWKEVRNGS*CGDIGGHKRSP Trigger: GGGGGATCGTTTGTGGCCACCAATGTCCCCGCAGCAGCTCCCATTCCTGACCTCTTTCCACCCTGTCAAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 72 bp | GGAAAGAGGTCAGGAATGGGAGCTGCTGCGGGGACATaGGTGGCCACAAACGATCCCCCTGAAGATGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GKRSGMGAAAGT*VATNDPPEDVL Trigger: CAGGACATCTTCAGGGGGATCGTTTGTGGCCACCAATGTCCCCGCAGCAGCTCCCATTCCTGACCTCTTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 90 bp | GTCATCCCCAGGAGCCGTCCACGTCAGATTCACCAGGTTCTGCCCTaGGATGCTGGCCTTCAGGTCAGTGATTTGACAGGGTGGAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: VIPRSRPRQIHQVLP*DAGLQVSDLTGWKE Trigger: CTCTTTCCACCCTGTCAAATCACTGACCTGAAGGCCAGCATCCAAGGGCAGAACCTGGTGAATCTGACGTGGACGGCTCCTGGGGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | TGCTGCGGGGACATTGGTGGCCACAAACGATCCCCCTaGAGATGTCCTGCTGAAGCACAGCTGCTTGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: CCGDIGGHKRSP*RCPAEAQLLVL Trigger: CAAGACAAGCAGCTGTGCTTCAGCAGGACATCTTCAGGGGGATCGTTTGTGGCCACCAATGTCCCCGCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS GCA 72 bp | GTGGGTGCAGGTGGCTGGGCTGTCATGGGAGTGGTTTaGTTGAAGTCCTCAGATTCCTGGATGACTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: VGAGGWAVMGVV*LKSSDSWMTSH Trigger: GTGGGAAGTCATCCAGGAATCTGAGGACTTCAAGCAAACCACTCCCATGACAGCCCAGCCACCTGCACCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 72 bp | TTGGATGCTGGCCTTCAGGTCAGTGATTTGACAGGGTaGAAAGAGGTCAGGAATGGGAGCTGCTGCGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: LDAGLQVSDLTG*KEVRNGSCCGD Trigger: GTCCCCGCAGCAGCTCCCATTCCTGACCTCTTTCCACCCTGTCAAATCACTGACCTGAAGGCCAGCATCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 72 bp | GGTGGGTGCAGGTGGCTGGGCTGTCATGGGAGTGGTTaGCTTGAAGTCCTCAGATTCCTGGATGACTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GGCRWLGCHGSG*LEVLRFLDDFP Trigger: TGGGAAGTCATCCAGGAATCTGAGGACTTCAAGCAAACCACTCCCATGACAGCCCAGCCACCTGCACCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 72 bp | AGGAGCCGTCCACGTCAGATTCACCAGGTTCTGCCCTaGGATGCTGGCCTTCAGGTCAGTGATTTGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSRPRQIHQVLP*DAGLQVSDLTG Trigger: CCCTGTCAAATCACTGACCTGAAGGCCAGCATCCAAGGGCAGAACCTGGTGAATCTGACGTGGACGGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | GGGCTTCATCTTCCGGCACGTCGTGGTCTATGGCGATaGCGATGCCCTCATAGCCGTTGTTGTTCAGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLHLPARRGLWR*RCPHSRCCSVG Trigger: TCCAACTGAACAACAACGGCTATGAGGGCATCGTCATCGCCATAGACCACGACGTGCCGGAAGATGAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | TTGAGTCTTCGGGAATGGGCGGCTCCTGAGCGGGGATaGACACAGACACCCGTGCAATGTTGGAGATTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSLREWAAPERG*TQTPVQCWRFL Trigger: CAGAAATCTCCAACATTGCACGGGTGTCTGTGTTCATCCCCGCTCAGGAGCCGCCCATTCCCGAAGACTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS GCA 72 bp | TACCGGGGTCACTGTAATAGGAGGCAGTGTAGCACTTaGTGCACGGGAGGTGACAGTCAAGGTGAGAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: YRGHCNRRQCST*CTGGDSQGESL Trigger: CAGACTCTCACCTTGACTGTCACCTCCCGTGCAGCAAGTGCTACACTGCCTCCTATTACAGTGACCCCGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS GCA 72 bp | GGCCCTGAGAATAGGCGAGGCTCCTTGGCGAATGCTTaGATACACTGTTACAGGGCTGGGGAATTTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GPENRRGSLANA*IHCYRAGEFPC Trigger: ACAGGGAAATTCCCCAGCCCTGTAACAGTGTATGCAAGCATTCGCCAAGGAGCCTCGCCTATTCTCAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 90 bp | TTCAATCAAGGCTGTGACGCTGGCCCTGAGAATAGGCGAGGCTCCTaGGCGAATGCTTGCATACACTGTTACAGGGCTGGGGAATTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FNQGCDAGPENRRGS*ANACIHCYRAGEFP Trigger: GGGAAATTCCCCAGCCCTGTAACAGTGTATGCAAGCATTCGCCAAGGAGCCTCGCCTATTCTCAGGGCCAGCGTCACAGCCTTGATTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 72 bp | GGATGCGTTGTCCAGGTGATAAGAAACAAGGTGTCCTaGCCCACCGAGCTGTCCACGATCACTGAGCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: GCVVQVIRNKVS*PTELSTITEPF Trigger: GAATGGCTCAGTGATCGTGGACAGCTCGGTGGGCAAGGACACCTTGTTTCTTATCACCTGGACAACGCATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | GAGAGGCCTGAGTCACCATGTCCTTTATGTGTTGAATaGGGGCTTCATCTTCCGGCACGTCGTGGTCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: ERPESPCPLCVE*GLHLPARRGLW Trigger: CCATAGACCACGACGTGCCGGAAGATGAAGCCCTCATTCAACACATAAAGGACATGGTGACTCAGGCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | GGCTCTGTTCTTCGGAGGTGCTGCTCTCTGTCTGTCTaGAGTGACTCCTCCCAGAGCCCATATTTTAACGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSVLRRCCSLSV*SDSSQSPYFNA Trigger: AGCGTTAAAATATGGGCTCTGGGAGGAGTCACTTCAGACAGACAGAGAGCAGCACCTCCGAAGAACAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 72 bp | GGCGATGACGATGCCCTCATAGCCGTTGTTGTTCAGTaGGATGAGGGACTCACTCAGAACTCCTTCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GDDDALIAVVVQ*DEGLTQNSFQK Trigger: CTTCTGGAAGGAGTTCTGAGTGAGTCCCTCATCCAACTGAACAACAACGGCTATGAGGGCATCGTCATCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 90 bp | GTGGTCTATGGCGATGACGATGCCCTCATAGCCGTTGTTGTTCAGTaGGATGAGGGACTCACTCAGAACTCCTTCCAGAAGGTGGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VVYGDDDALIAVVVQ*DEGLTQNSFQKVED Trigger: ATCCTCCACCTTCTGGAAGGAGTTCTGAGTGAGTCCCTCATCCAACTGAACAACAACGGCTATGAGGGCATCGTCATCGCCATAGACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 90 bp | CACTTCCACATTATCTTCAGCACGTGGATGCCAGGAATGGTGCTGTaGATGCTGATGTCAGGACAAGGGGGAGTTGAGTCTTCGGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: HFHIIFSTWMPGMVL*MLMSGQGGVESSGM Trigger: CATTCCCGAAGACTCAACTCCCCCTTGTCCTGACATCAGCATCAACAGCACCATTCCTGGCATCCACGTGCTGAAGATAATGTGGAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | TGCTCCACAGTCTGCAGCAGGAAAAGCCGGCTTGCCTaGTTCATTCGGTTAAGACGATCATCGTTCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: CSTVCSRKSRLA*FIRLRRSSFSM Trigger: CATGCTGAACGATGATCGTCTTAACCGAATGAATCAGGCAAGCCGGCTTTTCCTGCTGCAGACTGTGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 72 bp | GTCATGGGAGTGGTTTGCTTGAAGTCCTCAGATTCCTaGATGACTTCCCACGTGCTTCGGAGATTGCATCGT | + |
|
Preference number: 6 (lower is better) Translates to: VMGVVCLKSSDS*MTSHVLRRLHR Trigger: ACGATGCAATCTCCGAAGCACGTGGGAAGTCATCCAGGAATCTGAGGACTTCAAGCAAACCACTCCCATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 72 bp | ACCGAGCTGTCCACGATCACTGAGCCATTCATCCATTaGTTATTCTGGAGATTAACTCCCCTGCTCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TELSTITEPFIH*LFWRLTPLLSS Trigger: GCTGGAGAGCAGGGGAGTTAATCTCCAGAATAACCAATGGATGAATGGCTCAGTGATCGTGGACAGCTCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 72 bp | AATGCTGTATTTCCAAAAGCCAACCTTAGCCGTGCCTaGGACTTGGAGGTAGGCCACCTTAGTGGTTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: NAVFPKANLSRA*DLEVGHLSGCV Trigger: GACACAACCACTAAGGTGGCCTACCTCCAAGTCCCAGGCACGGCTAAGGTTGGCTTTTGGAAATACAGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 90 bp | TTCAAACAGGTATGGAGAGGCCTGAGTCACCATGTCCTTTATGTGTaGAATGAGGGCTTCATCTTCCGGCACGTCGTGGTCTATGGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: FKQVWRGLSHHVLYV*NEGFIFRHVVVYGD Trigger: ATCGCCATAGACCACGACGTGCCGGAAGATGAAGCCCTCATTCAACACATAAAGGACATGGTGACTCAGGCCTCTCCATACCTGTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | CACTCATGGACAAAGGTCCTGTCTTGTGGCCCATACTaGGTCAGCTTCTTTCCTGCTAAGAAGTCAGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HSWTKVLSCGPY*VSFFPAKKSGV Trigger: GACTCCTGACTTCTTAGCAGGAAAGAAGCTGACTCAGTATGGGCCACAAGACAGGACCTTTGTCCATGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS GCA 72 bp | AGGAGTCAGGTGAATCCTGATCCCCTTTTCTCCACATaGTCCTATATGTTCGGTGTAGGGCTCATCATTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSQVNPDPLFST*SYMFGVGLIIA Trigger: GGCAATGATGAGCCCTACACCGAACATATAGGAGCATGTGGAGAAAAGGGGATCAGGATTCACCTGACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | TTAGTGATACAACTGCCTCCCTGGCACCGACGAACTTaGTTTTTACCGGTAATGGCTGCTGAACACCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: LVIQLPPWHRRT*FLPVMAAEHLT Trigger: AGTGAGGTGTTCAGCAGCCATTACCGGTAAAAATCAAGTTCGTCGGTGCCAGGGAGGCAGTTGTATCACTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | CTCTTTGGGGATAAGACCGGTAGTGTTCACTTGGAGTaGGGTGTTGAAGTGGTCCCTGAGATCAACGATACT | + |
|
Preference number: 6 (lower is better) Translates to: LFGDKTGSVHLE*GVEVVPEINDT Trigger: AGTATCGTTGATCTCAGGGACCACTTCAACACCTCACTCCAAGTGAACACTACCGGTCTTATCCCCAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS GCA 72 bp | CACATGCTCCTATATGTTCGGTGTAGGGCTCATCATTaGCTAGAGGGCTGGTTGTTGATACAAGGACATCAG | + |
|
Preference number: 6 (lower is better) Translates to: HMLLYVRCRAHH*LEGWLLIQGHQ Trigger: CTGATGTCCTTGTATCAACAACCAGCCCTCTAGGCAATGATGAGCCCTACACCGAACATATAGGAGCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 72 bp | ATTTCCCCTAGCCACTTCCACATTATCTTCAGCACGTaGATGCCAGGAATGGTGCTGTTGATGCTGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ISPSHFHIIFST*MPGMVLLMLMS Trigger: TGACATCAGCATCAACAGCACCATTCCTGGCATCCACGTGCTGAAGATAATGTGGAAGTGGCTAGGGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | GTCAGCTTCTTTCCTGCTAAGAAGTCAGGAGTCAGGTaGATCCTGATCCCCTTTTCTCCACATGCTCCTATA | + |
|
Preference number: 6 (lower is better) Translates to: VSFFPAKKSGVR*ILIPFSPHAPI Trigger: TATAGGAGCATGTGGAGAAAAGGGGATCAGGATTCACCTGACTCCTGACTTCTTAGCAGGAAAGAAGCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 72 bp | ATAGATGTCCCTCCTGCAGATACTGTGGGTAAGTGCTaGATCAGCAGATCTCTGTCAGCACCACTGTTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: IDVPPADTVGKC*ISRSLSAPLFN Trigger: GTTAAACAGTGGTGCTGACAGAGATCTGCTGATCAAGCACTTACCCACAGTATCTGCAGGAGGGACATCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 90 bp | ACAGCCTGGATAGCAATGAAGATATCTGTGCCATTTCCAAAAGTGTaGCCTCCCAGTTCAAACTCAAAGATTTCCTCAGAGCTGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TAWIAMKISVPFPKV*PPSSNSKISSELAS Trigger: AGAGGCCAGCTCTGAGGAAATCTTTGAGTTTGAACTGGGAGGCAACACTTTTGGAAATGGCACAGATATCTTCATTGCTATCCAGGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | TCAGCAGATCTCTGTCAGCACCACTGTTTAACTGTTTaGGTTCGCTTTGTACATAGGCAGCACTGTCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SADLCQHHCLTV*VRFVHRQHCQR Trigger: CCTTTGACAGTGCTGCCTATGTACAAAGCGAACTCAAACAGTTAAACAGTGGTGCTGACAGAGATCTGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS TCA 72 bp | GATGAACACAGACACCCGTGCAATGTTGGAGATTTCTaGTTTCAGATTGGACTTATCCACAGCCTGGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: DEHRHPCNVGDF*FQIGLIHSLDS Trigger: GCTATCCAGGCTGTGGATAAGTCCAATCTGAAATCAGAAATCTCCAACATTGCACGGGTGTCTGTGTTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 72 bp | CTGCTTGTCTTGAACATAACTAGTTTCAGGACGTGGTaGGTTCATTCTTACTTCACCATCCTCAATCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLVLNITSFRTW*VHSYFTILNPA Trigger: GGCTGGATTGAGGATGGTGAAGTAAGAATGAACCCACCACGTCCTGAAACTAGTTATGTTCAAGACAAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 90 bp | TCATTGCCTAGAGGGCTGGTTGTTGATACAAGGACATCAGCGTTTTaGAAGGTTTCAAGTTTTGGCCTCGTATATTCAGGCTTTGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLPRGLVVDTRTSAF*KVSSFGLVYSGFAF Trigger: GAAGGCAAAGCCTGAATATACGAGGCCAAAACTTGAAACCTTCAAAAACGCTGATGTCCTTGTATCAACAACCAGCCCTCTAGGCAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 72 bp | TGGCTGCTGAACACCTCACTGCTTGGGGTTTTCCTTTaGATAAGTAGAACTTCTCGTCGTTGTTGTATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WLLNTSLLGVFL*ISRTSRRCCIH Trigger: ATGAATACAACAACGACGAGAAGTTCTACTTATCCAAAGGAAAACCCCAAGCAGTGAGGTGTTCAGCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 72 bp | CCCATCGGTCAGCAGCACAATTTCAGATCCATCAGTTaGATACTTCTTCTTTATCACTGTAAATGCTGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PIGQQHNFRSIS*ILLLYHCKCCP Trigger: CGGACAGCATTTACAGTGATAAAGAAGAAGTATCCAACTGATGGATCTGAAATTGTGCTGCTGACCGATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 72 bp | CAGCTGCTTGTCTTGAACATAACTAGTTTCAGGACGTaGTGGGTTCATTCTTACTTCACCATCCTCAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: QLLVLNITSFRT*WVHSYFTILNP Trigger: TGGATTGAGGATGGTGAAGTAAGAATGAACCCACCACGTCCTGAAACTAGTTATGTTCAAGACAAGCAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 72 bp | AGAGGGCTGGTTGTTGATACAAGGACATCAGCGTTTTaGAAGGTTTCAAGTTTTGGCCTCGTATATTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGLVVDTRTSAF*KVSSFGLVYSG Trigger: GCCTGAATATACGAGGCCAAAACTTGAAACCTTCAAAAACGCTGATGTCCTTGTATCAACAACCAGCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 72 bp | ATAGCAATGAAGATATCTGTGCCATTTCCAAAAGTGTaGCCTCCCAGTTCAAACTCAAAGATTTCCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: IAMKISVPFPKV*PPSSNSKISSE Trigger: CTCTGAGGAAATCTTTGAGTTTGAACTGGGAGGCAACACTTTTGGAAATGGCACAGATATCTTCATTGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 72 bp | TTGGTTAAACATGATGGAAGCCTTCTCGTTTTGGTGTaGATCTGGTACAAATACACAATTGTCTTTATACAG | + |
|
Preference number: 6 (lower is better) Translates to: LVKHDGSLLVLV*IWYKYTIVFIQ Trigger: CTGTATAAAGACAATTGTGTATTTGTACCAGATCCACACCAAAACGAGAAGGCTTCCATCATGTTTAACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 90 bp | CACAGAATTGATATTTTGGTTAAACATGATGGAAGCCTTCTCGTTTaGGTGTGGATCTGGTACAAATACACAATTGTCTTTATACAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HRIDILVKHDGSLLV*VWIWYKYTIVFIQS Trigger: GGACTGTATAAAGACAATTGTGTATTTGTACCAGATCCACACCAAAACGAGAAGGCTTCCATCATGTTTAACCAAAATATCAATTCTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CAA 72 bp | GATATTTTGGTTAAACATGATGGAAGCCTTCTCGTTTaGGTGTGGATCTGGTACAAATACACAATTGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: DILVKHDGSLLV*VWIWYKYTIVF Trigger: AAAGACAATTGTGTATTTGTACCAGATCCACACCAAAACGAGAAGGCTTCCATCATGTTTAACCAAAATATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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| CDS CCA 72 bp | ATATTTTGGTTAAACATGATGGAAGCCTTCTCGTTTTaGTGTGGATCTGGTACAAATACACAATTGTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: IFWLNMMEAFSF*CGSGTNTQLSL Trigger: TAAAGACAATTGTGTATTTGTACCAGATCCACACCAAAACGAGAAGGCTTCCATCATGTTTAACCAAAATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029919.7 |
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