Pregenerated sensors for CLASRP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061028Ensembl transcript IDs: ENSMUST00000086041.7, ENSMUST00000207524.2, ENSMUST00000207663.2, ENSMUST00000207907.2, ENSMUST00000208068.2
Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGTCCGTCGCGGGAACCGCCGTCTGAGTGCCGCCGTCCGCGGCTaGGGGAGCGTGAGTAGCGCCGGGAACGGGAGCGTGAGCGGGACC | + |
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Preference number: 1 (lower is better) Translates to: GVRRGNRRLSAAVRG*GSVSSAGNGSVSGT Trigger: GGTCCCGCTCACGCTCCCGTTCCCGGCGCTACTCACGCTCCCGCAGCCGCGGACGGCGGCACTCAGACGGCGGTTCCCGCGACGGACACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR CCA 90 bp | GGGAGCGCGAACTGGAGCGCGAACTGGATCGGGAGCTGGAGGTCCTaGAGGCGGAGGACGAAGAGGAGCGGCGGCGGGTGCTGGCATTAC | + |
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Preference number: 1 (lower is better) Translates to: GSANWSANWIGSWRS*RRRTKRSGGGCWHY Trigger: GTAATGCCAGCACCCGCCGCCGCTCCTCTTCGTCCTCCGCCTCCAGGACCTCCAGCTCCCGATCCAGTTCGCGCTCCAGTTCGCGCTCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR CCA 90 bp | GGCGTGGGTGCCCAGAGCTCGCCCAGCCCACCTCAGTCAAGAGTCTaGGACTTGGGGGCCAGCTGGAGTCCCATGGGAGGCAGGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: GVGAQSSPSPPQSRV*DLGASWSPMGGRDG Trigger: CCCATCCCTGCCTCCCATGGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTGACTGAGGTGGGCTGGGCGAGCTCTGGGCACCCACGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR TCA 90 bp | GGCTGCGGCTTCCGCTCCGGGTCACACTGCGGCTTCGGGAAGGGCTaGGGGACCAGCTGCTGCGGCTATGACTGCTGCTATGGTGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: GCGFRSGSHCGFGKG*GTSCCGYDCCYGAW Trigger: CCAGGCACCATAGCAGCAGTCATAGCCGCAGCAGCTGGTCCCTCAGCCCTTCCCGAAGCCGCAGTGTGACCCGGAGCGGAAGCCGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR CCA 90 bp | GTGCCCAGAGCTCGCCCAGCCCACCTCAGTCAAGAGTCTGGGACTTaGGGGCCAGCTGGAGTCCCATGGGAGGCAGGGATGGGACTTAGT | + |
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Preference number: 1 (lower is better) Translates to: VPRARPAHLSQESGT*GPAGVPWEAGMGLS Trigger: ACTAAGTCCCATCCCTGCCTCCCATGGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTGACTGAGGTGGGCTGGGCGAGCTCTGGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR CCA 90 bp | AGTCTGGGACTTGGGGGCCAGCTGGAGTCCCATGGGAGGCAGGGATaGGACTTAGTTTGCCTGGGTAGCCCTTCCCCAGTCTCTGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SLGLGGQLESHGRQG*DLVCLGSPSPVSGL Trigger: CAGCCCAGAGACTGGGGAAGGGCTACCCAGGCAAACTAAGTCCCATCCCTGCCTCCCATGGGACTCCAGCTGGCCCCCAAGTCCCAGACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR CCA 90 bp | CCTTCTCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATaGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCATGCTCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: PSLSALAPSFGSFGP*LAVHPLAPAAHAPA Trigger: AGCAGGAGCATGAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGAGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207663.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| 3UTR TCA 90 bp | TCCTCTCGCTCCTGCCGCTCATGCTCCTGCTGGATCATCTTCTCCTaGGCTGCCTTCTTATCCGCCTTGAACTGGCGGTTCAGAGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: SSRSCRSCSCWIIFS*AAFLSALNWRFRAF Trigger: GAAGGCTCTGAACCGCCAGTTCAAGGCGGATAAGAAGGCAGCTCAGGAGAAGATGATCCAGCAGGAGCATGAGCGGCAGGAGCGAGAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 ENSMUST00000207907.2 |
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| 3UTR GCA 90 bp | TCGCTCCTGCCGCTCATGCTCCTGCTGGATCATCTTCTCCTGAGCTaGCTTCTTATCCGCCTTGAACTGGCGGTTCAGAGCCTTCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: SLLPLMLLLDHLLLS*LLIRLELAVQSLLH Trigger: ATGCAGAAGGCTCTGAACCGCCAGTTCAAGGCGGATAAGAAGGCAGCTCAGGAGAAGATGATCCAGCAGGAGCATGAGCGGCAGGAGCGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 ENSMUST00000207907.2 |
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| 3UTR CCA 90 bp | CAACTCCGTTTTCTGCCTAATGTCTGTAATGGGGGCTTCGGGACCTaGACCTTGAGCGCCTTCGGGAGGAACTGTACTCTCGACTGTAGC | + |
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Preference number: 1 (lower is better) Translates to: QLRFLPNVCNGGFGT*TLSAFGRNCTLDCS Trigger: GCTACAGTCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCCATTACAGACATTAGGCAGAAAACGGAGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000207663.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| 3UTR-3UTR GCA 90 bp | CGGCTCCTGCTCCTTCGGCGGGGCACGTACCCGCCGCGCCGGGCAGGGGAGCGTGCGGGAGCGGGAGCGTaGGTGGCGGCCAGAGCGGTA | + |
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Preference number: 2 (lower is better) Translates to: RLLLLRRGTYPPRRAGERAGAGA*VAARAV Trigger: TACCGCTCTGGCCGCCACGCACGCTCCCGCTCCCGC...ACGCTCCCCTGCCCGGCGCGGCGGGTACGTGCCCCGCCGAAGGAGCAGGAGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCTGCTCCTTCGGCGGGGCACGTACCCGCCGCGCCGGGCAGGGGAGCGTGGCGGGGCCACCCGTTTaGGGAGGCGCAGGGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GSCSFGGARTRRAGQGSVAGPPV*GGAGGF Trigger: GAAGCCCCCTGCGCCTCCCCAAACGGGTGGCCCCGC...CACGCTCCCCTGCCCGGCGCGGCGGGTACGTGCCCCGCCGAAGGAGCAGGAGCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR TCA 90 bp | CGGTGTCCGTCGCGGGAACCGCCGTCTGAGTGCCGCCGTCCGCGGCTGCGGGAGTTGTGGCCTGCTTATTaGGATCAGCCACCTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: RCPSREPPSECRRPRLRELWPAY*DQPPAP Trigger: AGGAGCAGGTGGCTGATCTCAATAAGCAGGCCACAA...CTCCCGCAGCCGCGGACGGCGGCACTCAGACGGCGGTTCCCGCGACGGACACCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR CCA 90 bp | TCGCTGTCGCCGGGAACGACGGCCCGAGTACATGGCTTTCTCCTCCTCCAGGGCTTTTTCCTCGCGGCCTaGGCTCGGGGAGCGAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: SLSPGTTARVHGFLLLQGFFLAA*ARGARA Trigger: CGCTCTCGCTCCCCGAGCCCAGGCCGCGAGGAAAAA...GCCCTGGAGGAGGAGAAAGCCATGTACTCGGGCCGTCGTTCCCGGCGACAGCGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR GCA 90 bp | TACCAGCGGCAGGCTCGGTCTTTTTCAGCTTCTCGCCCACAGCAGGGGACGCTGGGCGGCTGCAGCAGCTaGAGCAGCTGCCTCCTCGTC | + |
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Preference number: 2 (lower is better) Translates to: YQRQARSFSASRPQQGTLGGCSS*SSCLLV Trigger: GACGAGGAGGCAGCTGCTGCAGCTGCTGCAGCCGCC...CAGCGTCCCCTGCTGTGGGCGAGAAGCTGAAAAAGACCGAGCCTGCCGCTGGTA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGGCTTCGGGACCTGGACCTTGAGCGCCTTCGGGAGGAACTGTACTCTCGACCGACCCGCCACTCACTaGCGGCGAAGTCGTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: GGFGTWTLSAFGRNCTLDRPATH*RRSRSA Trigger: TGCAGAACGACTTCGCCGGCAGTGAGTGGCGGGTCG...GTCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207663.2 |
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| 3UTR-3UTR TCA 90 bp | ATCGGGAGCTGGAGGTCCTGGAGGCGGAGGACGAAGAGGAGCGGCGGCGGGTGCCTTTCCGTAGCATCCTaGCAAAGTCTCCATCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: IGSWRSWRRRTKRSGGGCLSVAS*QSLHQP Trigger: TGGCTGATGGAGACTTTGTCAGGATGCTACGGAAAG...GCACCCGCCGCCGCTCCTCTTCGTCCTCCGCCTCCAGGACCTCCAGCTCCCGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCCTGGGGGAGAAGGGGTaGGATAGGCGTGGGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: HSDLSGHGSQFILSLLPLLGEKG*DRRGCP Trigger: TGGGCACCCACGCCTATCCCACCCCTTCTCCCCCAG...GAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 ENSMUST00000207907.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGGAGCGGCGGCGGGTGCTGGCATTACGGCCTGGAGCGGGGCCACCCGTTCATAGGTGTAGCCGATaGAAGCCTTCTTCTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: EEERRRVLALRPGAGPPVHRCSR*KPSSLP Trigger: TGGCAGAGAAGAAGGCTTCCATCGGCTACACCTATG...AACGGGTGGCCCCGCTCCAGGCCGTAATGCCAGCACCCGCCGCCGCTCCTCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207663.2 |
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| 3UTR-3UTR TCA 90 bp | GGGACTTGGGGGCCAGCTGGAGTCCCATGGGAGGCAGGGATGGGACTTAGTTTGTCTGGACACTGCTGCTaGCGGGAGTTAGACGGGCGA | + |
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Preference number: 2 (lower is better) Translates to: GTWGPAGVPWEAGMGLSLSGHCC*RELDGR Trigger: TCGCCCGTCTAACTCCCGTCAGCAGCAGTGTCCAGA...CAAACTAAGTCCCATCCCTGCCTCCCATGGGACTCCAGCTGGCCCCCAAGTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGGAGGCAGGGATGGGACTTAGTTTGCCTGGGTAGCCCTTCCCCAGTCTCTTTTTTCCTCGCGGCCTaGGCTCGGGGAGCGAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: HGRQGWDLVCLGSPSPVSFFLAA*ARGARA Trigger: CGCTCTCGCTCCCCGAGCCCAGGCCGCGAGGAAAAA...AGAGACTGGGGAAGGGCTACCCAGGCAAACTAAGTCCCATCCCTGCCTCCCATG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGCCTGGTCAGCTTCTCCCTTGGGGGCGATGGTGAGTGACTCTGGCTCTGGCCATGGGAGGCAGGGATaGGACTTAGTTTGCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PAWSASPLGAMVSDSGSGHGRQG*DLVCLG Trigger: ACCCAGGCAAACTAAGTCCCATCCCTGCCTCCCATG...GCCAGAGCCAGAGTCACTCACCATCGCCCCCAAGGGAGAAGCTGACCAGGCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR CAA 90 bp | CTCTCGACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATaGGCGTTCCCATTCTTCTCTCTCCTTCTCTCTCCGCTCTCGCTC | + |
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Preference number: 2 (lower is better) Translates to: LSTVAWGGRAALAAI*AFPFFSLLLSPLSL Trigger: GAGCGAGAGCGGAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207663.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCCTGTCTCTTTACCAGCGGCAGGCTCGGTCTTTTTCAGCTTCTCGCCCACACAGCAGGGGACGCTaGCGGCCTGGTCAGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: QLLSLYQRQARSFSASRPHSRGR*RPGQLL Trigger: GAGAAGCTGACCAGGCCGGCAGCGTCCCCTGCTGTG...TGGGCGAGAAGCTGAAAAAGACCGAGCCTGCCGCTGGTAAAGAGACAGGAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCGACGGCCCGAGTACATaGCTTTCTCCTCCTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: HSDLSGHGSQFILSLLPLDGPST*LSPPPG Trigger: CCCTGGAGGAGGAGAAAGCCATGTACTCGGGCCGTC...GAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCACACTGCGGCTTCGGGAAGGGCTGAGGGACCAGCTGCTGCGGCTATGACTTTGTGGCCTGCTTATTaGGATCAGCCACCTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GHTAASGRAEGPAAAAMTLWPAY*DQPPAP Trigger: AGGAGCAGGTGGCTGATCTCAATAAGCAGGCCACAA...AGTCATAGCCGCAGCAGCTGGTCCCTCAGCCCTTCCCGAAGCCGCAGTGTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCCTGTCTCTTTACCAGCGGCAGGCTCGGTCTTTTTCAGCTTCTCGCCCACCAGCTGGAGTCCCATaGGAGGCAGGGATGGGACTT | + |
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Preference number: 2 (lower is better) Translates to: QLLSLYQRQARSFSASRPPAGVP*EAGMGL Trigger: AAGTCCCATCCCTGCCTCCCATGGGACTCCAGCTGG...TGGGCGAGAAGCTGAAAAAGACCGAGCCTGCCGCTGGTAAAGAGACAGGAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR CAA 90 bp | CGTTTTCTGCCTAATGTCTGTAATGGGGGCTTCGGGACCTGGACCTaGAGCGCCTTCGGGAGGAACTGTACTCTCGACTGTAGCGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RFLPNVCNGGFGTWT*SAFGRNCTLDCSVG Trigger: CCCCACGCTACAGTCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCCATTACAGACATTAGGCAGAAAACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000207663.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTCAGTCAAGAGTCTGGGACTTGGGGGCCAGCTGGAGTCCCATGGGAGGCAGCTTTCCGTAGCATCCTaGCAAAGTCTCCATCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: TSVKSLGLGGQLESHGRQLSVAS*QSLHQP Trigger: TGGCTGATGGAGACTTTGTCAGGATGCTACGGAAAG...CTGCCTCCCATGGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTGACTGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR GCA 90 bp | TTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCATAGTCTCCATCAGCCATaGCGTAGGTTGTGGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: FGSFGPWLAVHPLAPAAHSLHQP*RRLWPA Trigger: AGCAGGCCACAACCTACGGCATGGCTGATGGAGACT...ATGAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGCAGCTCCTGTCTCTTTACCAGCGGCAGGCTCGGTCTTTTTCAGCTTCTCGCAAGAGTCTGGGACTTaGGGGCCAGCTGGAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LAAPVSLPAAGSVFFSFSQESGT*GPAGVP Trigger: TGGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTG...CGAGAAGCTGAAAAAGACCGAGCCTGCCGCTGGTAAAGAGACAGGAGCTGCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGGCCACAGTACTATCTTCATAGGTGTAGCCGATGGAAGCCTTCTTCTCTGCCCGGCGAAGTCGTTCTaGACCAGGCCTCTGTACCGC | + |
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Preference number: 2 (lower is better) Translates to: LGHSTIFIGVADGSLLLCPAKSF*TRPLYR Trigger: GCGGTACAGAGGCCTGGTGCAGAACGACTTCGCCGG...GCAGAGAAGAAGGCTTCCATCGGCTACACCTATGAAGATAGTACTGTGGCCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207663.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTTCTGCCTAATGTCTGTACTCTGGCTGTGGCTCTaGCTGCGGCTTCGGCTCCGG | + |
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Preference number: 2 (lower is better) Translates to: TETQQHNSPNSVFCLMSVLWLWL*LRLRLR Trigger: CCGGAGCCGAAGCCGCAGCCAGAGCCACAGCCAGAG...TACAGACATTAGGCAGAAAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207663.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCTCTCTCCTTCTCTCTCAGTCTCCATCAGCCATaGCGTAGGTTGTGGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: ERLWRLYWRSHSSLSFSLSLHQP*RRLWPA Trigger: AGCAGGCCACAACCTACGGCATGGCTGATGGAGACT...GAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207663.2 |
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| 3UTR-3UTR CCA 90 bp | CTCGGCCACAGTACTATCTTCATAGGTGTAGCCGATGGAAGCCTTCTTCTCTGCGACGGCCCGAGTACATaGCTTTCTCCTCCTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LGHSTIFIGVADGSLLLCDGPST*LSPPPG Trigger: CCCTGGAGGAGGAGAAAGCCATGTACTCGGGCCGTC...GCAGAGAAGAAGGCTTCCATCGGCTACACCTATGAAGATAGTACTGTGGCCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207663.2 |
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| 3UTR CAA 90 bp | CTGCTGACGGGAGTTAGACGGGCGAGTTCCAAATTCTTACTGACTTaGGCAGCTCCTGTCTCTTTACCAGCGGCAGGCTCGGTCTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: LLTGVRRASSKFLLT*AAPVSLPAAGSVFF Trigger: GAAAAAGACCGAGCCTGCCGCTGGTAAAGAGACAGGAGCTGCCAAAGTCAGTAAGAATTTGGAACTCGCCCGTCTAACTCCCGTCAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGCAGCTCCTGTCTCTTTACCAGCGGCAGGCTCGGTCTTTTTCAGCTTCTCGATGTTTGATGGCCTCTaGCTCCTCCTTATCTTTCCG | + |
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Preference number: 2 (lower is better) Translates to: LAAPVSLPAAGSVFFSFSMFDGL*LLLIFP Trigger: CGGAAAGATAAGGAGGAGGCAGAGGCCATCAAACAT...CGAGAAGCTGAAAAAGACCGAGCCTGCCGCTGGTAAAGAGACAGGAGCTGCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR GCA 72 bp | CGCGGGAACCGCCGTCTGAGTGCCGCCGTCCGCGGCTaGGGGAGCGTGAGTAGCGCCGGGAACGGGAGCGTG | + |
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Preference number: 3 (lower is better) Translates to: RGNRRLSAAVRG*GSVSSAGNGSV Trigger: CACGCTCCCGTTCCCGGCGCTACTCACGCTCCCGCAGCCGCGGACGGCGGCACTCAGACGGCGGTTCCCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR CCA 72 bp | CGAAGAGGAGCGGCGGCGGGTGCTGGCATTACGGCCTaGAGCGGGGCCACCCGTTTGGGGAGGCGCAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: RRGAAAGAGITA*SGATRLGRRRG Trigger: CCCCCTGCGCCTCCCCAAACGGGTGGCCCCGCTCCAGGCCGTAATGCCAGCACCCGCCGCCGCTCCTCTTCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR GCA 72 bp | CCCGCTTATAGCGGTCACCTGAACGGGAGCGGCTCCTaGTCCTTCGGCGGGGCACGTACCCGCCGCGCCGGG | + |
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Preference number: 3 (lower is better) Translates to: PAYSGHLNGSGS*SFGGARTRRAG Trigger: CCCGGCGCGGCGGGTACGTGCCCCGCCGAAGGAGCAGGAGCCGCTCCCGTTCAGGTGACCGCTATAAGCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR CCA 72 bp | TGGAGGCGGAGGACGAAGAGGAGCGGCGGCGGGTGCTaGCATTACGGCCTGGAGCGGGGCCACCCGTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: WRRRTKRSGGGC*HYGLERGHPFG Trigger: CCCAAACGGGTGGCCCCGCTCCAGGCCGTAATGCCAGCACCCGCCGCCGCTCCTCTTCGTCCTCCGCCTCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR GCA 72 bp | TCCTGGAGGCGGAGGACGAAGAGGAGCGGCGGCGGGTaGTGGCATTACGGCCTGGAGCGGGGCCACCCGTTT | + |
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Preference number: 3 (lower is better) Translates to: SWRRRTKRSGGG*WHYGLERGHPF Trigger: AAACGGGTGGCCCCGCTCCAGGCCGTAATGCCAGCACCCGCCGCCGCTCCTCTTCGTCCTCCGCCTCCAGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR TCA 72 bp | CTTCGGGAAGGGCTGAGGGACCAGCTGCTGCGGCTATaGCTGCTGCTATGGTGCCTGGGGCCCCGGGCACCC | + |
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Preference number: 3 (lower is better) Translates to: LREGLRDQLLRL*LLLWCLGPRAP Trigger: GGGTGCCCGGGGCCCCAGGCACCATAGCAGCAGTCATAGCCGCAGCAGCTGGTCCCTCAGCCCTTCCCGAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR CCA 72 bp | GCCCAGAGCTCGCCCAGCCCACCTCAGTCAAGAGTCTaGGACTTGGGGGCCAGCTGGAGTCCCATGGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: AQSSPSPPQSRV*DLGASWSPMGG Trigger: GCCTCCCATGGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTGACTGAGGTGGGCTGGGCGAGCTCTGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
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| 3UTR GCA 72 bp | CTTGGGCTGGGGGAGAAGGGGTGGGATAGGCGTGGGTaGCCAGAGCTCGCCCAGCCCACCTCAGTCAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LGLGEKGWDRRG*PELAQPTSVKS Trigger: ACTCTTGACTGAGGTGGGCTGGGCGAGCTCTGGGCACCCACGCCTATCCCACCCCTTCTCCCCCAGCCCAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
||
| 3UTR CCA 72 bp | GCTCGCCCAGCCCACCTCAGTCAAGAGTCTGGGACTTaGGGGCCAGCTGGAGTCCCATGGGAGGCAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: ARPAHLSQESGT*GPAGVPWEAGM Trigger: CATCCCTGCCTCCCATGGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTGACTGAGGTGGGCTGGGCGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCGGGAGCTGGAGGTCCTGGAGGCGGAGGACGAAGAGGAGCGGCGGCGGGTGCGTTGTGGCCTGCTTATaGAGATCAGCCACCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: IGSWRSWRRRTKRSGGGCVVACL*RSATCS Trigger: GGAGCAGGTGGCTGATCTCAATAAGCAGGCCACAAC...GCACCCGCCGCCGCTCCTCTTCGTCCTCCGCCTCCAGGACCTCCAGCTCCCGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGCTTCGGGACCTGGACCTTGAGCGCCTTCGGGAGGAACTGTACTCTCGACCTGGGAGGGCTGATCTaGCGGCCTCTCAGCCGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GGFGTWTLSAFGRNCTLDLGGLI*RPLSRF Trigger: GAAGCGGCTGAGAGGCCGCAAGATCAGCCCTCCCAG...GTCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207663.2 |
||
| 3UTR CCA 72 bp | GCGCCTTCGGGAGGAACTGTACTCTCGACTGTAGCGTaGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: APSGGTVLSTVA*GGRAALAAILA Trigger: CGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGAGAGTACAGTTCCTCCCGAAGGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207663.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| 3UTR TCA 72 bp | TTCCGCTCCGGGTCACACTGCGGCTTCGGGAAGGGCTaGGGGACCAGCTGCTGCGGCTATGACTGCTGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FRSGSHCGFGKG*GTSCCGYDCCY Trigger: ATAGCAGCAGTCATAGCCGCAGCAGCTGGTCCCTCAGCCCTTCCCGAAGCCGCAGTGTGACCCGGAGCGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
||
| 3UTR GCA 72 bp | CTGGAGTCCCATGGGAGGCAGGGATGGGACTTAGTTTaGCTGGGTAGCCCTTCCCCAGTCTCTGGGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LESHGRQGWDLV*LGSPSPVSGLA Trigger: AGCCAGCCCAGAGACTGGGGAAGGGCTACCCAGGCAAACTAAGTCCCATCCCTGCCTCCCATGGGACTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
||
| 3UTR TCA 72 bp | TGCAGGCCCACCGGGCCCAGCTCTGGACACTGCTGCTaGCGGGAGTTAGACGGGCGAGTTCCAAATTCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: CRPTGPSSGHCC*RELDGRVPNSY Trigger: GTAAGAATTTGGAACTCGCCCGTCTAACTCCCGTCAGCAGCAGTGTCCAGAGCTGGGCCCGGTGGGCCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTCCTGTCTCTTTACCAGCGGCAGGCTCGGTCTTTTTCAGCTTCTCGCCCATCAAGAGTCTGGGACTaGGGGGCCAGCTGGAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QLLSLYQRQARSFSASRPSRVWD*GASWSP Trigger: GGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTGA...TGGGCGAGAAGCTGAAAAAGACCGAGCCTGCCGCTGGTAAAGAGACAGGAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGGTTGTGGCCTGCTTATaGAGATCAGCCACCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LHSDLSGHGSQFILSLLPVVACL*RSATCS Trigger: GGAGCAGGTGGCTGATCTCAATAAGCAGGCCACAAC...CGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207663.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTTTCAGCTTCTCGCCCACAGCAGGGGACGCTGCCGGCCTGGTCAGCTTCTTCATCTTCATCCGAGTaGCTCTCCTCCTCTGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SFSASRPQQGTLPAWSASSSSSE*LSSSAG Trigger: ACCAGCAGAGGAGGAGAGCAACTCGGATGAAGATGA...AGAAGCTGACCAGGCCGGCAGCGTCCCCTGCTGTGGGCGAGAAGCTGAAAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207663.2 |
||
| 3UTR TCA 72 bp | GCTCATCCACATCCACCTCCACGTCGATGTCGGGGATaGCCTCATCTTCATCCGAGTTGCTCTCCTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AHPHPPPRRCRG*PHLHPSCSPPL Trigger: CAGAGGAGGAGAGCAACTCGGATGAAGATGAGGTCATCCCCGACATCGACGTGGAGGTGGATGTGGATGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207663.2 |
||
| 3UTR GCA 72 bp | TTCTTATCCGCCTTGAACTGGCGGTTCAGAGCCTTCTaGATCCGAAGCTTCAGCCTCTCCTGTGGGGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FLSALNWRFRAF*IRSFSLSCGVS Trigger: GCTGACCCCACAGGAGAGGCTGAAGCTTCGGATGCAGAAGGCTCTGAACCGCCAGTTCAAGGCGGATAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 ENSMUST00000207907.2 |
||
| 3UTR GCA 72 bp | CCGCTCATGCTCCTGCTGGATCATCTTCTCCTGAGCTaGCTTCTTATCCGCCTTGAACTGGCGGTTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PLMLLLDHLLLS*LLIRLELAVQS Trigger: GCTCTGAACCGCCAGTTCAAGGCGGATAAGAAGGCAGCTCAGGAGAAGATGATCCAGCAGGAGCATGAGCGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 ENSMUST00000207907.2 |
||
| 3UTR TCA 72 bp | CTCCATCAGCCATGCCGTAGGTTGTGGCCTGCTTATTaGGATCAGCCACCTGCTCCTGGTTCAGCTCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: LHQPCRRLWPAY*DQPPAPGSAHP Trigger: TGGATGAGCTGAACCAGGAGCAGGTGGCTGATCTCAATAAGCAGGCCACAACCTACGGCATGGCTGATGGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207663.2 |
||
| 3UTR CCA 72 bp | TTTCTGCCTAATGTCTGTAATGGGGGCTTCGGGACCTaGACCTTGAGCGCCTTCGGGAGGAACTGTACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FLPNVCNGGFGT*TLSAFGRNCTL Trigger: GAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCCATTACAGACATTAGGCAGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000207663.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCCAGCCCACCTCAGTCAAGAGTCTGGGACTTGGGGGCCAGCTGGAGTCCCATAAATTCTTACTGACTTaGGCAGCTCCTGTCTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: AQPTSVKSLGLGGQLESHKFLLT*AAPVSL Trigger: TAAAGAGACAGGAGCTGCCAAAGTCAGTAAGAATTT...ATGGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTGACTGAGGTGGGCTGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
||
| CDS-3UTR GCA 90 bp | CGGTGTCCGTCGCGGGAACCGCCGTCTGAGTGCCGCCGTCCGCGGCTGCGGGAGCCGGCGAAGTCGTTCTaGACCAGGCCTCTGTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: RCPSREPPSECRRPRLREPAKSF*TRPLYR Trigger: GCGGTACAGAGGCCTGGTGCAGAACGACTTCGCCGG...CTCCCGCAGCCGCGGACGGCGGCACTCAGACGGCGGTTCCCGCGACGGACACCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207524.2 |
||
| CDS-3UTR GCA 90 bp | CTCGACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCCCCGGATGCGGCGGCTaGAGCAGCTGCAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LDCSVGRASGSGGYIGVPPGCGG*SSCSSC Trigger: GCAGCTGCTGCAGCTGCTGCAGCCGCCGCATCCGGG...GGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGAG 69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGCGGGAGCGTGAGTAGCGCCGGGAACGGGAGCGTGAGCGGGACCAGGAGCCGAAGTTTCCGCTCATaGTTCCGAGCCTCGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GCGSVSSAGNGSVSGTRSRSFRS*FRASCH Trigger: GTGGCACGAGGCTCGGAAGCATGAGCGGAAACTTCG...GCTCCTGGTCCCGCTCACGCTCCCGTTCCCGGCGCTACTCACGCTCCCGCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
||
| CDS-3UTR CCA 90 bp | AGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCTCGCGGGGCCACCCGTTTaGGGAGGCGCAGGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVGRASGSGGYIGVPILLAGPPV*GGAGGF Trigger: GAAGCCCCCTGCGCCTCCCCAAACGGGTGGCCCCGC...GAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | GGGGAGAAGGGGTGGGATAGGCGTGGGTGCCCAGAGCTCGCCCAGCCCACCTCATCTGGACACTGCTGCTaGCGGGAGTTAGACGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GEKGWDRRGCPELAQPTSSGHCC*RELDGR Trigger: TCGCCCGTCTAACTCCCGTCAGCAGCAGTGTCCAGA...TGAGGTGGGCTGGGCGAGCTCTGGGCACCCACGCCTATCCCACCCCTTCTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207907.2 |
||
| CDS-3UTR GCA 90 bp | CTCGACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCCACAGCAGGGGACGCTaGCGGCCTGGTCAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LDCSVGRASGSGGYIGVPHSRGR*RPGQLL Trigger: GAGAAGCTGACCAGGCCGGCAGCGTCCCCTGCTGTG...GGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | GACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCATTTGCTGCTATGGTGCCTaGGGCCCCGGGCACCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DCSVGRASGSGGYIGVPICCYGA*GPGHPA Trigger: AGCGGGGTGCCCGGGGCCCCAGGCACCATAGCAGCA...AATGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGCTTCGGGACCTGGACCTTGAGCGCCTTCGGGAGGAACTGTACTCTCGACGGGGGCGATGGTGAGTaGCTCTGGCTCTGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGFGTWTLSAFGRNCTLDGGDGE*LWLWLW Trigger: CCACAGCCAGAGCCAGAGTCACTCACCATCGCCCCC...GTCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCGGCGGCTGCAGCAGCTaGAGCAGCTGCCTCCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VAWGGRAALAAILAFPFFGGCSS*SSCLLV Trigger: GACGAGGAGGCAGCTGCTGCAGCTGCTGCAGCCGCC...GAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTGGGGCAGCCCCGGATaGGGCGGCTGCAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSPLSLLHSDLSGHGSQWGSPG*GGCSSC Trigger: GCAGCTGCTGCAGCCGCCGCATCCGGGGCTGCCCCA...CTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGAGAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | TTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCATGCGGGAGCGGGAGCGTaGGTGGCGGCCAGAGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FGSFGPWLAVHPLAPAAHAGAGA*VAARAV Trigger: TACCGCTCTGGCCGCCACGCACGCTCCCGCTCCCGC...ATGAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGCTTCGGGACCTGGACCTTGAGCGCCTTCGGGAGGAACTGTACTCTCGACCACCGGGCCCAGCTCTaGACACTGCTGCTGACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGFGTWTLSAFGRNCTLDHRAQL*TLLLTG Trigger: TCCCGTCAGCAGCAGTGTCCAGAGCTGGGCCCGGTG...GTCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207907.2 |
||
| CDS-3UTR GCA 90 bp | GCGCCTTCGGGAGGAACTGTACTCTCGACTGTAGCGTGGGGAGGGCGAGCGGCTTCCTCGCTGGGTCTCTaGAGGCCTCCGTACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: APSGGTVLSTVAWGGRAASSLGL*RPPYSS Trigger: TGAGCTGTACGGAGGCCTGCAGAGACCCAGCGAGGA...AGCCGCTCGCCCTCCCCACGCTACAGTCGAGAGTACAGTTCCTCCCGAAGGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCACCCGGATGCGGCGGCTaGAGCAGCTGCAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLSALAPSFGSFGPWLAPGCGG*SSCSSC Trigger: GCAGCTGCTGCAGCTGCTGCAGCCGCCGCATCCGGG...TGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGAGAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | CATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCCTCTGGCTGTGGCTCTaGCTGCGGCTTCGGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HSDLSGHGSQFILSLLPLLWLWL*LRLRLR Trigger: CCGGAGCCGAAGCCGCAGCCAGAGCCACAGCCAGAG...GAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGGGCTTCGGGAAGGGCTaGGGGACCAGCTGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLHSDLSGHGSQFILSLLGFGKG*GTSCCG Trigger: GCCGCAGCAGCTGGTCCCTCAGCCCTTCCCGAAGCC...CAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCATGCTCCTGGGGGCGATGGTGAGTaGCTCTGGCTCTGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFGPWLAVHPLAPAAHAPGGDGE*LWLWLW Trigger: CCACAGCCAGAGCCAGAGTCACTCACCATCGCCCCC...AGGAGCATGAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | CTCGACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCTGGGGTCAGCTTGGGTaGCTTTGGCAGCTCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDCSVGRASGSGGYIGVPWGQLG*LWQLLS Trigger: AGACAGGAGCTGCCAAAGTCACCCAAGCTGACCCCA...GGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATGCTGCTATGGTGCCTaGGGCCCCGGGCACCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRSRSFIRIFRAMARSSCCYGA*GPGHPA Trigger: AGCGGGGTGCCCGGGGCCCCAGGCACCATAGCAGCA...TGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | GCGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCTCTCTCCTTCTCTCTCCGCTTCGGCTCCGGCTCTaGCTGCGGCTTCCGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AALAAILAFPFFSLLLSPLRLRL*LRLPLR Trigger: CCGGAGCGGAAGCCGCAGCCAGAGCCGGAGCCGAAG...CGGAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTCTCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCTCTGGCTGTGGCTCTaGCTGCGGCTTCGGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSPLSLLHSDLSGHGSLWLWL*LRLRLR Trigger: CCGGAGCCGAAGCCGCAGCCAGAGCCACAGCCAGAG...CGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGAGAAGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGTCCTGGAGGCGGAGGACGAAGAGGAGCGGCGGCGGGTGCTGGCATTATGCACCTGCAGGAACTaGGCGGGGTCTTTCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: LEVLEAEDEEERRRVLALCTCRN*AGSFLI Trigger: GATTAAGAAAGACCCCGCTCAGTTCCTGCAGGTGCA...TAATGCCAGCACCCGCCGCCGCTCCTCTTCGTCCTCCGCCTCCAGGACCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207524.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTTCGGGACCTGGACCTTGAGCGCCTTCGGGAGGAACTGTACTCTCGACTGCAGCTGCTGCGGCTATaGCTGCTGCTATGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLRDLDLERLREELYSRLQLLRL*LLLWCL Trigger: CAGGCACCATAGCAGCAGTCATAGCCGCAGCAGCTG...CAGTCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | GAGCGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCTCTCTCCTTCTCTCTCGGCTTCGGGAAGGGCTaGGGGACCAGCTGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERLWRLYWRSHSSLSFSLGFGKG*GTSCCG Trigger: GCCGCAGCAGCTGGTCCCTCAGCCCTTCCCGAAGCC...GAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCAGCTTCTCGCCCACAGCAGGGGACGCTGCCGGCCTGGTCAGCTTCTCCTCCTCGCTGGGTCTCTaGAGGCCTCCGTACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFSFSPTAGDAAGLVSFSSSLGL*RPPYSS Trigger: TGAGCTGTACGGAGGCCTGCAGAGACCCAGCGAGGA...GGAGAAGCTGACCAGGCCGGCAGCGTCCCCTGCTGTGGGCGAGAAGCTGAAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207524.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGCTGCCTTCTTATCCGCCTTGAACTGGCGGTTCAGAGCCTTCTGCATCCGGGCGGCTGCAGCAGCTaGAGCAGCTGCCTCCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSCLLIRLELAVQSLLHPGGCSS*SSCLLV Trigger: GACGAGGAGGCAGCTGCTGCAGCTGCTGCAGCCGCC...CGGATGCAGAAGGCTCTGAACCGCCAGTTCAAGGCGGATAAGAAGGCAGCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207907.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCGTTCCCATTCTTCTCTCTCCTTCTCTCTCCGCTCTCGCTCCTTCATTCGGCGGGAGCGGGAGCGTaGGTGGCGGCCAGAGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LAFPFFSLLLSPLSLLHSAGAGA*VAARAV Trigger: TACCGCTCTGGCCGCCACGCACGCTCCCGCTCCCGC...CGAATGAAGGAGCGAGAGCGGAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | TGTACTCTCGACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCTGCTGCGGCTATGACTaGTGCTATGGTGCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CTLDCSVGRASGSGGYIGCCGYD*CYGAWG Trigger: GCCCCAGGCACCATAGCAGCAGTCATAGCCGCAGCA...GCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGAGAGTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | CTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCCACAGCAGGGGACGCTaGCGGCCTGGTCAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRSRSFIRIFRAMARSSSHSRGR*RPGQLL Trigger: GAGAAGCTGACCAGGCCGGCAGCGTCCCCTGCTGTG...GGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | AGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCTCGACGGCCCGAGTACATaGCTTTCTCCTCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVGRASGSGGYIGVPILLDGPST*LSPPPG Trigger: CCCTGGAGGAGGAGAAAGCCATGTACTCGGGCCGTC...GAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCATTTTTCCTCGCGGCCTaGGCTCGGGGAGCGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSLSALAPSFGSFGPWLAFFLAA*ARGARA Trigger: CGCTCTCGCTCCCCGAGCCCAGGCCGCGAGGAAAAA...TGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGAGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCTTCGGGACCTGGACCTTGAGCGCCTTCGGGAGGAACTGTACTCTCGACAAGAGTCTGGGACTTaGGGGCCAGCTGGAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGLRDLDLERLREELYSRQESGT*GPAGVP Trigger: TGGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTG...TCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207907.2 |
||
| CDS-3UTR TCA 90 bp | TCGACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCACGTCGATGTCGGGGATaGCCTCATCTTCATCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: STVAWGGRAALAAILAFPRRCRG*PHLHPS Trigger: ACTCGGATGAAGATGAGGTCATCCCCGACATCGACG...TGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | CTCGACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCTTGTTGGTGTCCCCCTaGCAGGGCATCATGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LDCSVGRASGSGGYIGVPLLVSP*QGIMFT Trigger: TGTGAACATGATGCCCTGGCAGGGGGACACCAACAA...GGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| 3UTR CAA 72 bp | GTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATaGGCGTTCCCATTCTTCTCTCTCCTTCTCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VAWGGRAALAAI*AFPFFSLLLSP Trigger: CGGAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207663.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCATGCTCCTCGAAGTTTCCGCTCATaGTTCCGAGCCTCGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFGPWLAVHPLAPAAHAPRSFRS*FRASCH Trigger: GTGGCACGAGGCTCGGAAGCATGAGCGGAAACTTCG...AGGAGCATGAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | GCCCAGCCCACCTCAGTCAAGAGTCTGGGACTTGGGGGCCAGCTGGAGTCCCATAGCAGCCAGGGCAACTaGAGAATCCAGGTGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: AQPTSVKSLGLGGQLESHSSQGN*RIQVNL Trigger: AAGGTTCACCTGGATTCTGCAGTTGCCCTGGCTGCT...ATGGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTGACTGAGGTGGGCTGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207524.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCCGGCGAAGTCGTTCTaGACCAGGCCTCTGTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSALAPSFGSFGPWLAVPAKSF*TRPLYR Trigger: GCGGTACAGAGGCCTGGTGCAGAACGACTTCGCCGG...AACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | CGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCTCTCTCCTTCTCTCTCCGCCCGGCGAAGTCGTTCTaGACCAGGCCTCTGTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLWRLYWRSHSSLSFSLRPAKSF*TRPLYR Trigger: GCGGTACAGAGGCCTGGTGCAGAACGACTTCGCCGG...GCGGAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | GACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCATTAGTCTCCATCAGCCATaGCGTAGGTTGTGGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DCSVGRASGSGGYIGVPISLHQP*RRLWPA Trigger: AGCAGGCCACAACCTACGGCATGGCTGATGGAGACT...AATGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTTCGGGACCTGGACCTTGAGCGCCTTCGGGAGGAACTGTACTCTCGACTGGGTCAATCATGTTGTTaGTGTCCCCCTGCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRDLDLERLREELYSRLGQSCC*CPPARA Trigger: TGCCCTGGCAGGGGGACACCAACAACATGATTGACC...CAGTCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGGCTTCGGGACCTGGACCTTGAGCGCCTTCGGGAGGAACTGTACTCTCGATTGTGGCCTGCTTATTaGGATCAGCCACCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WGLRDLDLERLREELYSRLWPAY*DQPPAP Trigger: AGGAGCAGGTGGCTGATCTCAATAAGCAGGCCACAA...TCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCACAGCTGCTGCGGCTATaGCTGCTGCTATGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRSRSFIRIFRAMARSSQLLRL*LLLWCL Trigger: CAGGCACCATAGCAGCAGTCATAGCCGCAGCAGCTG...TGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | AACTGTACTCTCGACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTCGAAGTTTCCGCTCATaGTTCCGAGCCTCGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NCTLDCSVGRASGSGGYIRSFRS*FRASCH Trigger: GTGGCACGAGGCTCGGAAGCATGAGCGGAAACTTCG...AATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGAGAGTACAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207663.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | TGTACTCTCGACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCAGCAGCCAGGGCAACTaGAGAATCCAGGTGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTLDCSVGRASGSGGYIGSSQGN*RIQVNL Trigger: AAGGTTCACCTGGATTCTGCAGTTGCCCTGGCTGCT...GCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGAGAGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | TTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCATGCTCCTGCTTGTTGGTGTCCCCCTaGCAGGGCATCATGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FRAMARSSSSRSCRSCSCLLVSP*QGIMFT Trigger: TGTGAACATGATGCCCTGGCAGGGGGACACCAACAA...GCAGGAGCATGAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCATGCTCCTGTTGTTGGTGTCCCCCTaGCAGGGCATCATGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSGHGSQFILSLLPLMLLLLVSP*QGIMFT Trigger: TGTGAACATGATGCCCTGGCAGGGGGACACCAACAA...CAGGAGCATGAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTTCTGCCTAATGTCTGTATGGGGCAGCCCCGGATaGGGCGGCTGCAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TETQQHNSPNSVFCLMSVWGSPG*GGCSSC Trigger: GCAGCTGCTGCAGCCGCCGCATCCGGGGCTGCCCCA...TACAGACATTAGGCAGAAAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CCA 90 bp | GTGACCGCTTATAGGGGTCATAGGTGGGGCTGTCTCGGCGGGCATAACTGGGAGGGTCAATCATGTTGTTaGTGTCCCCCTGCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTAYRGHRWGCLGGHNWEGQSCC*CPPARA Trigger: TGCCCTGGCAGGGGGACACCAACAACATGATTGACC...CTCCCAGTTATGCCCGCCGAGACAGCCCCACCTATGACCCCTATAAGCGGTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207524.2 |
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| CDS-3UTR CCA 90 bp | TCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCATGCTCCTGGTCAATCATGTTGTTaGTGTCCCCCTGCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFGPWLAVHPLAPAAHAPGQSCC*CPPARA Trigger: TGCCCTGGCAGGGGGACACCAACAACATGATTGACC...AGGAGCATGAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CCA 90 bp | ATATTGGCGTTCCCATTCTTCTCTCTCCTTCTCTCTCCGCTCTCGCTCCTTCATCTTCGGCTCCGGCTCTaGCTGCGGCTTCCGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ILAFPFFSLLLSPLSLLHLRLRL*LRLPLR Trigger: CCGGAGCGGAAGCCGCAGCCAGAGCCGGAGCCGAAG...ATGAAGGAGCGAGAGCGGAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CCA 90 bp | CATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCCATGGGAGGCAGGGATaGGACTTAGTTTGCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSDLSGHGSQFILSLLPLHGRQG*DLVCLG Trigger: ACCCAGGCAAACTAAGTCCCATCCCTGCCTCCCATG...GAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207907.2 |
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| CDS-3UTR CCA 90 bp | CTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCAGCTGGAGTCCCATaGGAGGCAGGGATGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSALAPSFGSFGPWLAVHPAGVP*EAGMGL Trigger: AAGTCCCATCCCTGCCTCCCATGGGACTCCAGCTGG...ATGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207907.2 |
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| CDS-3UTR TCA 90 bp | TCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCATGTGCACCTGCAGGAACTaGGCGGGGTCTTTCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: SDLSGHGSQFILSLLPLMCTCRN*AGSFLI Trigger: GATTAAGAAAGACCCCGCTCAGTTCCTGCAGGTGCA...CATGAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR TCA 90 bp | CATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCTGCACCTGCAGGAACTaGGCGGGGTCTTTCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: HSDLSGHGSQFILSLLPLCTCRN*AGSFLI Trigger: GATTAAGAAAGACCCCGCTCAGTTCCTGCAGGTGCA...GAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR TCA 90 bp | CTCCTTCTCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCGTCGATGTCGGGGATaGCCTCATCTTCATCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLSPLSLLHSDLSGHGSRRCRG*PHLHPS Trigger: ACTCGGATGAAGATGAGGTCATCCCCGACATCGACG...CGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGAGAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR GCA 90 bp | CCTTCTCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAAGTCTCCATCAGCCATaGCGTAGGTTGTGGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSLSALAPSFGSFGPWLASLHQP*RRLWPA Trigger: AGCAGGCCACAACCTACGGCATGGCTGATGGAGACT...TGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGAGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | CATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCCTTTCCGTAGCATCCTaGCAAAGTCTCCATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSDLSGHGSQFILSLLPLLSVAS*QSLHQP Trigger: TGGCTGATGGAGACTTTGTCAGGATGCTACGGAAAG...GAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCTCTCTCCATGTTTGATGGCCTCTaGCTCCTCCTTATCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GEGERLWRLYWRSHSSLSMFDGL*LLLIFP Trigger: CGGAAAGATAAGGAGGAGGCAGAGGCCATCAAACAT...GGAGAGAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | AGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCTCATGTTTGATGGCCTCTaGCTCCTCCTTATCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVGRASGSGGYIGVPILLMFDGL*LLLIFP Trigger: CGGAAAGATAAGGAGGAGGCAGAGGCCATCAAACAT...GAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | GTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTGGGGCAGCCCCGGATaGGGCGGCTGCAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSFYFTTETQQHNSPNSVWGSPG*GGCSSC Trigger: GCAGCTGCTGCAGCCGCCGCATCCGGGGCTGCCCCA...AACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CCA 90 bp | ATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGGCGGGGCCACCCGTTTaGGGAGGCGCAGGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MLAFISLQKPSSITAPTPAGPPV*GGAGGF Trigger: GAAGCCCCCTGCGCCTCCCCAAACGGGTGGCCCCGC...CGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | TCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTTGTGGCCTGCTTATTaGGATCAGCCACCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSFIRIFRAMARSSSSRLWPAY*DQPPAP Trigger: AGGAGCAGGTGGCTGATCTCAATAAGCAGGCCACAA...GCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGCCCGGATGCGGCGGCTaGAGCAGCTGCAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MLAFISLQKPSSITAPTPPGCGG*SSCSSC Trigger: GCAGCTGCTGCAGCTGCTGCAGCCGCCGCATCCGGG...CGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | AATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGCGGGAGCGGGAGCGTaGGTGGCGGCCAGAGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NVSFYFTTETQQHNSPNSAGAGA*VAARAV Trigger: TACCGCTCTGGCCGCCACGCACGCTCCCGCTCCCGC...GGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTGCGGGGCCACCCGTTTaGGGAGGCGCAGGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LAFISLQKPSSITAPTPFAGPPV*GGAGGF Trigger: GAAGCCCCCTGCGCCTCCCCAAACGGGTGGCCCCGC...AAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | TATTGGCGTTCCCATTCTTCTCTCTCCTTCTCTCTCCGCTCTCGCTCCTTCATTTCCTCGCTGGGTCTCTaGAGGCCTCCGTACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YWRSHSSLSFSLRSRSFISSLGL*RPPYSS Trigger: TGAGCTGTACGGAGGCCTGCAGAGACCCAGCGAGGA...AATGAAGGAGCGAGAGCGGAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTTGCTGCTATGGTGCCTaGGGCCCCGGGCACCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LAFISLQKPSSITAPTPFCCYGA*GPGHPA Trigger: AGCGGGGTGCCCGGGGCCCCAGGCACCATAGCAGCA...AAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | AATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCCTTCGGCTCCGGCTCTaGCTGCGGCTTCCGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NVSFYFTTETQQHNSPNSLRLRL*LRLPLR Trigger: CCGGAGCGGAAGCCGCAGCCAGAGCCGGAGCCGAAG...GGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| 3UTR CAA 72 bp | GGAGTTAGACGGGCGAGTTCCAAATTCTTACTGACTTaGGCAGCTCCTGTCTCTTTACCAGCGGCAGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GVRRASSKFLLT*AAPVSLPAAGS Trigger: CGAGCCTGCCGCTGGTAAAGAGACAGGAGCTGCCAAAGTCAGTAAGAATTTGGAACTCGCCCGTCTAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207524.2 ENSMUST00000207663.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTCCTGTCTCTTTACCAGCGGCAGGCTCGGTCTTTTTCAGCTTCTCGCCCAGGAAGCCTTCTTCTCTaGCAGCTTCTTCTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLYQRQARSFSASRPGSLLL*QLLLLI Trigger: GATGAGAAGAAGAAGCTGGCAGAGAAGAAGGCTTCC...TGGGCGAGAAGCTGAAAAAGACCGAGCCTGCCGCTGGTAAAGAGACAGGAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207524.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTGGAAGCCTTCTTCTCTaGCAGCTTCTTCTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLSALAPSFGSFGPWLAVGSLLL*QLLLLI Trigger: GATGAGAAGAAGAAGCTGGCAGAGAAGAAGGCTTCC...AACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | CTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTGGAAGCCTTCTTCTCTaGCAGCTTCTTCTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LAPSFGSFGPWLAVHPLAGSLLL*QLLLLI Trigger: GATGAGAAGAAGAAGCTGGCAGAGAAGAAGGCTTCC...AGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTGGCGGCTGCAGCAGCTaGAGCAGCTGCCTCCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LAFISLQKPSSITAPTPFGGCSS*SSCLLV Trigger: GACGAGGAGGCAGCTGCTGCAGCTGCTGCAGCCGCC...AAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | GTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTTTTTCCTCGCGGCCTaGGCTCGGGGAGCGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSFYFTTETQQHNSPNSVFFLAA*ARGARA Trigger: CGCTCTCGCTCCCCGAGCCCAGGCCGCGAGGAAAAA...AACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAAC 53% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTTTCCTCGCGGCCTaGGCTCGGGGAGCGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: MLAFISLQKPSSITAPTPFFLAA*ARGARA Trigger: CGCTCTCGCTCCCCGAGCCCAGGCCGCGAGGAAAAA...CGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTCTCTGGCTGTGGCTCTaGCTGCGGCTTCGGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LAFISLQKPSSITAPTPFLWLWL*LRLRLR Trigger: CCGGAGCCGAAGCCGCAGCCAGAGCCACAGCCAGAG...AAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | ATAATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTGGCTTCGGGAAGGGCTaGGGGACCAGCTGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IMLAFISLQKPSSITAPTGFGKG*GTSCCG Trigger: GCCGCAGCAGCTGGTCCCTCAGCCCTTCCCGAAGCC...AGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTGGGGGCGATGGTGAGTaGCTCTGGCTCTGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAFISLQKPSSITAPTPFGGDGE*LWLWLW Trigger: CCACAGCCAGAGCCAGAGTCACTCACCATCGCCCCC...AAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | ATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTCGGGACCTGGACCTTaGGCGCCTTCGGGAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: MLAFISLQKPSSITAPTPSGPGP*APSGGT Trigger: AGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGA...CGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086041.7 |
||
| CDS-3UTR GCA 90 bp | ACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTTCTGCCTAATGTCTGTACGAAGTTTCCGCTCATaGTTCCGAGCCTCGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TETQQHNSPNSVFCLMSVRSFRS*FRASCH Trigger: GTGGCACGAGGCTCGGAAGCATGAGCGGAAACTTCG...TACAGACATTAGGCAGAAAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207663.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | GTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTCCGGCGAAGTCGTTCTaGACCAGGCCTCTGTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: VSFYFTTETQQHNSPNSVPAKSF*TRPLYR Trigger: GCGGTACAGAGGCCTGGTGCAGAACGACTTCGCCGG...AACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | ATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGCAGCTGCTGCGGCTATaGCTGCTGCTATGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MLAFISLQKPSSITAPTPQLLRL*LLLWCL Trigger: CAGGCACCATAGCAGCAGTCATAGCCGCAGCAGCTG...CGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | ATAATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTGGGGGCTTCGGGACCTaGACCTTGAGCGCCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IMLAFISLQKPSSITAPTGGFGT*TLSAFG Trigger: CCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCC...AGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086041.7 |
||
| CDS-3UTR TCA 90 bp | GTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTACTGCAGAATCCAGGTaGACCTTGCAGGCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSFYFTTETQQHNSPNSVTAESR*TLQARP Trigger: TGGCCGAGCCTGCAAGGTTCACCTGGATTCTGCAGT...AACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTATCCGCCTTGAACTGGCGGTTCAGAGCCTTCTGCATCCGAAGCTTCAGCGTTCCAAATTCTTACTaGCTTTGGCAGCTCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLSALNWRFRAFCIRSFSVPNSY*LWQLLS Trigger: AGACAGGAGCTGCCAAAGTCAGTAAGAATTTGGAAC...GCTGAAGCTTCGGATGCAGAAGGCTCTGAACCGCCAGTTCAAGGCGGATAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207907.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTTCTGCCTAATGTCTGTAAGCAGCCAGGGCAACTaGAGAATCCAGGTGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TETQQHNSPNSVFCLMSVSSQGN*RIQVNL Trigger: AAGGTTCACCTGGATTCTGCAGTTGCCCTGGCTGCT...TACAGACATTAGGCAGAAAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | AATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCTGCTGCGGCTATGACTaGTGCTATGGTGCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVSFYFTTETQQHNSPNSCCGYD*CYGAWG Trigger: GCCCCAGGCACCATAGCAGCAGTCATAGCCGCAGCA...GGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTTGCTGCGGCTATGACTaGTGCTATGGTGCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAFISLQKPSSITAPTPFCCGYD*CYGAWG Trigger: GCCCCAGGCACCATAGCAGCAGTCATAGCCGCAGCA...AAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | ATAATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCACAGCAGGGGACGCTaGCGGCCTGGTCAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IMLAFISLQKPSSITAPTHSRGR*RPGQLL Trigger: GAGAAGCTGACCAGGCCGGCAGCGTCCCCTGCTGTG...AGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGCGCTCCTGCCGCTCATaGTCCTGCTGGATCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MLAFISLQKPSSITAPTPRSCRS*SCWIIF Trigger: GAAGATGATCCAGCAGGAGCATGAGCGGCAGGAGCG...CGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086041.7 |
||
| CDS-3UTR CCA 90 bp | ATAATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCTCTCGACTGTAGCGTaGGGAGGGCGAGCGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IMLAFISLQKPSSITAPTLSTVA*GGRAAL Trigger: CAGAGCCGCTCGCCCTCCCCACGCTACAGTCGAGAG...AGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086041.7 |
||
| CDS-3UTR GCA 90 bp | AATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCCGAAGTTTCCGCTCATaGTTCCGAGCCTCGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVSFYFTTETQQHNSPNSRSFRS*FRASCH Trigger: GTGGCACGAGGCTCGGAAGCATGAGCGGAAACTTCG...GGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086041.7 ENSMUST00000207663.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | AATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCCTTCAGCCTCTCCTGTaGGGTCAGCTTGGGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVSFYFTTETQQHNSPNSLQPLL*GQLGFG Trigger: GCCAAACCCAAGCTGACCCCACAGGAGAGGCTGAAG...GGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086041.7 |
||
| CDS-3UTR TCA 90 bp | GTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTGCACCTGCAGGAACTaGGCGGGGTCTTTCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: VSFYFTTETQQHNSPNSVCTCRN*AGSFLI Trigger: GATTAAGAAAGACCCCGCTCAGTTCCTGCAGGTGCA...AACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | AATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCCGTCGATGTCGGGGATaGCCTCATCTTCATCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NVSFYFTTETQQHNSPNSRRCRG*PHLHPS Trigger: ACTCGGATGAAGATGAGGTCATCCCCGACATCGACG...GGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGAGCAGCCAGGGCAACTaGAGAATCCAGGTGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLAFISLQKPSSITAPTPSSQGN*RIQVNL Trigger: AAGGTTCACCTGGATTCTGCAGTTGCCCTGGCTGCT...CGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | ATAATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTTCCTCGCTGGGTCTCTaGAGGCCTCCGTACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IMLAFISLQKPSSITAPTSSLGL*RPPYSS Trigger: TGAGCTGTACGGAGGCCTGCAGAGACCCAGCGAGGA...AGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | AATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCAGTCTCCATCAGCCATaGCGTAGGTTGTGGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NVSFYFTTETQQHNSPNSSLHQP*RRLWPA Trigger: AGCAGGCCACAACCTACGGCATGGCTGATGGAGACT...GGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | AATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGGTCAATCATGTTGTTaGTGTCCCCCTGCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVSFYFTTETQQHNSPNSGQSCC*CPPARA Trigger: TGCCCTGGCAGGGGGACACCAACAACATGATTGACC...GGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | ATAATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTGACGGCCCGAGTACATaGCTTTCTCCTCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IMLAFISLQKPSSITAPTDGPST*LSPPPG Trigger: CCCTGGAGGAGGAGAAAGCCATGTACTCGGGCCGTC...AGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | AATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCTTGTGGCCTGCTTATTaGGATCAGCCACCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NVSFYFTTETQQHNSPNSLWPAY*DQPPAP Trigger: AGGAGCAGGTGGCTGATCTCAATAAGCAGGCCACAA...GGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | GTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTCATAGGTGTAGCCGATaGAAGCCTTCTTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSFYFTTETQQHNSPNSVHRCSR*KPSSLP Trigger: TGGCAGAGAAGAAGGCTTCCATCGGCTACACCTATG...AACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTGGGTCAGCTTGGGTTTaGCAGCTCCTGTCTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LAFISLQKPSSITAPTPFGSAWV*QLLSLY Trigger: GTAAAGAGACAGGAGCTGCCAAACCCAAGCTGACCC...AAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086041.7 |
||
| CDS-3UTR TCA 90 bp | AATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCCTTTCCGTAGCATCCTaGCAAAGTCTCCATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NVSFYFTTETQQHNSPNSLSVAS*QSLHQP Trigger: TGGCTGATGGAGACTTTGTCAGGATGCTACGGAAAG...GGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTCTTTCCGTAGCATCCTaGCAAAGTCTCCATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAFISLQKPSSITAPTPFLSVAS*QSLHQP Trigger: TGGCTGATGGAGACTTTGTCAGGATGCTACGGAAAG...AAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGCATCTTCTCCTGAGCTaGCTTCTTATCCGCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MLAFISLQKPSSITAPTPHLLLS*LLIRLE Trigger: TTCAAGGCGGATAAGAAGGCAGCTCAGGAGAAGATG...CGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086041.7 |
||
| CDS-3UTR GCA 90 bp | ATAATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTTTGTTGGTGTCCCCCTaGCAGGGCATCATGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: IMLAFISLQKPSSITAPTLLVSP*QGIMFT Trigger: TGTGAACATGATGCCCTGGCAGGGGGACACCAACAA...AGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTGGAAGCCTTCTTCTCTaGCAGCTTCTTCTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LAFISLQKPSSITAPTPFGSLLL*QLLLLI Trigger: GATGAGAAGAAGAAGCTGGCAGAGAAGAAGGCTTCC...AAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR GCA 90 bp | ATAATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTATGTTTGATGGCCTCTaGCTCCTCCTTATCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IMLAFISLQKPSSITAPTMFDGL*LLLIFP Trigger: CGGAAAGATAAGGAGGAGGCAGAGGCCATCAAACAT...AGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCTTCGGGACCTGGACCTTGAGCGCCTTCGGGAGGAACTGTACTCTCGACTGGGAGGGCTGATCTaGCGGCCTCTCAGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WGLRDLDLERLREELYSRLGGLI*RPLSRF Trigger: GAAGCGGCTGAGAGGCCGCAAGATCAGCCCTCCCAG...TCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTCGACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCTGGGAGGGCTGATCTaGCGGCCTCTCAGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLDCSVGRASGSGGYIGVLGGLI*RPLSRF Trigger: GAAGCGGCTGAGAGGCCGCAAGATCAGCCCTCCCAG...AACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGAGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | TCGACTGTAGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCATGGTCAGCTTCTCCCTaGGGGGCGATGGTGAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: STVAWGGRAALAAILAFPWSASP*GAMVSD Trigger: GTCACTCACCATCGCCCCCAAGGGAGAAGCTGACCA...TGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCTACAGTCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | GGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCTCTCTCCTCAAGAGTCTGGGACTaGGGGGCCAGCTGGAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GEGERLWRLYWRSHSSLSSRVWD*GASWSP Trigger: GGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTGA...GGAGAGAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207907.2 |
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| CDS-3UTR CAA 90 bp | TTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCATGCTCCTGCCGGTCAATCATGTTGTaGGTGTCCCCCTGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FRAMARSSSSRSCRSCSCRSIML*VSPCQG Trigger: GCCCTGGCAGGGGGACACCAACAACATGATTGACCG...GCAGGAGCATGAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | AGCGTGGGGAGGGCGAGCGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCTCTCCTGTGGGGTCAGCTaGGGTGACTTTGGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVGRASGSGGYIGVPILLSCGVS*GDFGSS Trigger: GGAGCTGCCAAAGTCACCCAAGCTGACCCCACAGGA...GAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGCTCGCCCTCCCCACGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208068.2 |
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| CDS GCA 90 bp | CAGGGCTCTCAGCAGCCAGGGCAACTGCAGAATCCAGGTGAACCTTaGAGGCTCGGCCATGCACCTGCAGGAACTGAGCGGGGTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QGSQQPGQLQNPGEP*RLGHAPAGTERGLS Trigger: AGAAAGACCCCGCTCAGTTCCTGCAGGTGCATGGCCGAGCCTGCAAGGTTCACCTGGATTCTGCAGTTGCCCTGGCTGCTGAGAGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086041.7 ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS GCA 90 bp | CTGCCAGGGCATCATGTTCACAGGGCTCTCAGCAGCCAGGGCAACTaGAGAATCCAGGTGAACCTTGCAGGCTCGGCCATGCACCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPGHHVHRALSSQGN*RIQVNLAGSAMHLQ Trigger: CTGCAGGTGCATGGCCGAGCCTGCAAGGTTCACCTGGATTCTGCAGTTGCCCTGGCTGCTGAGAGCCCTGTGAACATGATGCCCTGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086041.7 ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | GGGGGCTTCGGGACCTGGACCTTGAGCGCCTTCGGGAGGAACTGTACTCTCGACGTTGTGGCCTGCTTATaGAGATCAGCCACCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGFGTWTLSAFGRNCTLDVVACL*RSATCS Trigger: GGAGCAGGTGGCTGATCTCAATAAGCAGGCCACAAC...GTCGAGAGTACAGTTCCTCCCGAAGGCGCTCAAGGTCCAGGTCCCGAAGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCCGGTCAATCATGTTGTaGGTGTCCCCCTGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSPLSLLHSDLSGHGSQFRSIML*VSPCQG Trigger: GCCCTGGCAGGGGGACACCAACAACATGATTGACCG...GAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | TCTCTCCGCTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCACGGTCAATCATGTTGTaGGTGTCCCCCTGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRSRSFIRIFRAMARSSRSIML*VSPCQG Trigger: GCCCTGGCAGGGGGACACCAACAACATGATTGACCG...TGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAGCGGAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | GGGACTTGGGGGCCAGCTGGAGTCCCATGGGAGGCAGGGATGGGACTTAGTTTGTCATCTTCATCCGAGTaGCTCTCCTCCTCTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTWGPAGVPWEAGMGLSLSSSSE*LSSSAG Trigger: ACCAGCAGAGGAGGAGAGCAACTCGGATGAAGATGA...CAAACTAAGTCCCATCCCTGCCTCCCATGGGACTCCAGCTGGCCCCCAAGTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207524.2 |
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| CDS-3UTR CAA 90 bp | GCGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCTCTCTCCTTCTCTCTCCGTGGTCAGCTTCTCCCTaGGGGGCGATGGTGAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AALAAILAFPFFSLLLSPWSASP*GAMVSD Trigger: GTCACTCACCATCGCCCCCAAGGGAGAAGCTGACCA...CGGAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | CTCTCGCTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGGTTGTGGCCTGCTTATaGAGATCAGCCACCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLLHSDLSGHGSQFILSVVACL*RSATCS Trigger: GGAGCAGGTGGCTGATCTCAATAAGCAGGCCACAAC...CGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAGCGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | CTCCTTCATTCGGATCTTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGTCATCTTCATCCGAGTaGCTCTCCTCCTCTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLHSDLSGHGSQFILSLLSSSSE*LSSSAG Trigger: ACCAGCAGAGGAGGAGAGCAACTCGGATGAAGATGA...CAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAAGATCCGAATGAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | GCGGCTCTGGCGGCTATATTGGCGTTCCCATTCTTCTCTCTCCTTCTCTCTCCGTCAGCTTGGGTGACTTaGGCAGCTCCTGTCTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AALAAILAFPFFSLLLSPSAWVT*AAPVSL Trigger: TAAAGAGACAGGAGCTGCCAAAGTCACCCAAGCTGA...CGGAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATATAGCCGCCAGAGCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208068.2 |
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| CDS CCA 90 bp | TGTGGTCTAGATGTGCACGAACATCAAAGCGGTCAATCATGTTGTTaGTGTCCCCCTGCCAGGGCATCATGTTCACAGGGCTCTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CGLDVHEHQSGQSCC*CPPARASCSQGSQQ Trigger: CTGCTGAGAGCCCTGTGAACATGATGCCCTGGCAGGGGGACACCAACAACATGATTGACCGCTTTGATGTTCGTGCACATCTAGACCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086041.7 ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | GTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTCTGGGAGGGCTGATCTaGCGGCCTCTCAGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSFYFTTETQQHNSPNSVLGGLI*RPLSRF Trigger: GAAGCGGCTGAGAGGCCGCAAGATCAGCCCTCCCAG...AACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | TTTCGGGCCATGGCTCGCAGTTCATCCTCTCGCTCCTGCCGCTCATGCTCCTGCAAATTCTTACTGACTTaGGCAGCTCCTGTCTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FRAMARSSSSRSCRSCSCKFLLT*AAPVSL Trigger: TAAAGAGACAGGAGCTGCCAAAGTCAGTAAGAATTT...GCAGGAGCATGAGCGGCAGGAGCGAGAGGATGAACTGCGAGCCATGGCCCGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207907.2 |
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| CDS-3UTR CAA 90 bp | GTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTCGGTCAATCATGTTGTaGGTGTCCCCCTGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSFYFTTETQQHNSPNSVRSIML*VSPCQG Trigger: GCCCTGGCAGGGGGACACCAACAACATGATTGACCG...AACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | ATATTGGCGTTCCCATTCTTCTCTCTCCTTCTCTCTCCGCTCTCGCTCCTTCATTCATCTTCATCCGAGTaGCTCTCCTCCTCTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ILAFPFFSLLLSPLSLLHSSSSE*LSSSAG Trigger: ACCAGCAGAGGAGGAGAGCAACTCGGATGAAGATGA...ATGAAGGAGCGAGAGCGGAGAGAGAAGGAGAGAGAAGAATGGGAACGCCAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | GTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTCCTGTGGGGTCAGCTaGGGTTTGGCAGCTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSFYFTTETQQHNSPNSVSCGVS*GLAAPV Trigger: GACAGGAGCTGCCAAACCCAAGCTGACCCCACAGGA...AACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086041.7 |
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| CDS-3UTR CAA 90 bp | TTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTTTGGTCAGCTTCTCCCTaGGGGGCGATGGTGAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LAFISLQKPSSITAPTPFWSASP*GAMVSD Trigger: GTCACTCACCATCGCCCCCAAGGGAGAAGCTGACCA...AAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | GTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTGTTGTGGCCTGCTTATaGAGATCAGCCACCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSFYFTTETQQHNSPNSVVVACL*RSATCS Trigger: GGAGCAGGTGGCTGATCTCAATAAGCAGGCCACAAC...AACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | GTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTTGGGGTCAGCTTGGGTTaGGCAGCTCCTGTCTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VSFYFTTETQQHNSPNSVGVSLG*AAPVSL Trigger: TAAAGAGACAGGAGCTGCCAAACCCAAGCTGACCCC...AACGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086041.7 |
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| CDS-3UTR CAA 90 bp | AATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCAAGCGGTCAATCATGTaGTTGGTGTCCCCCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NVSFYFTTETQQHNSPNSKRSIM*LVSPCQ Trigger: CTGGCAGGGGGACACCAACAACATGATTGACCGCTT...GGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS-3UTR CAA 90 bp | ATGTTAGCTTTTATTTCACTACAGAAACCCAGCAGCATAACAGCCCCAACTCCGTCATCTTCATCCGAGTaGCTCTCCTCCTCTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: MLAFISLQKPSSITAPTPSSSSE*LSSSAG Trigger: ACCAGCAGAGGAGGAGAGCAACTCGGATGAAGATGA...CGGAGTTGGGGCTGTTATGCTGCTGGGTTTCTGTAGTGAAATAAAAGCTAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086041.7 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS TCA 72 bp | GGGCTCTCAGCAGCCAGGGCAACTGCAGAATCCAGGTaGACCTTGCAGGCTCGGCCATGCACCTGCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GLSAARATAESR*TLQARPCTCRN Trigger: GTTCCTGCAGGTGCATGGCCGAGCCTGCAAGGTTCACCTGGATTCTGCAGTTGCCCTGGCTGCTGAGAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086041.7 ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS GCA 72 bp | CAGCAGCCAGGGCAACTGCAGAATCCAGGTGAACCTTaGAGGCTCGGCCATGCACCTGCAGGAACTGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: QQPGQLQNPGEP*RLGHAPAGTER Trigger: CCGCTCAGTTCCTGCAGGTGCATGGCCGAGCCTGCAAGGTTCACCTGGATTCTGCAGTTGCCCTGGCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086041.7 ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS GCA 72 bp | GACGCCGCTCCGCCCTCTTCTTGTAGTCCACCATCATaGCTCGAAGTTTCCGCTCATGCTTCCGAGCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: DAAPPSSCSPPS*LEVSAHASEPR Trigger: ACGAGGCTCGGAAGCATGAGCGGAAACTTCGAGGCATGATGGTGGACTACAAGAAGAGGGCGGAGCGGCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086041.7 ENSMUST00000207524.2 ENSMUST00000207663.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS GCA 72 bp | CATCATGTTCACAGGGCTCTCAGCAGCCAGGGCAACTaGAGAATCCAGGTGAACCTTGCAGGCTCGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: HHVHRALSSQGN*RIQVNLAGSAM Trigger: CATGGCCGAGCCTGCAAGGTTCACCTGGATTCTGCAGTTGCCCTGGCTGCTGAGAGCCCTGTGAACATGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086041.7 ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS GCA 72 bp | ACATCAAAGCGGTCAATCATGTTGTTGGTGTCCCCCTaGCAGGGCATCATGTTCACAGGGCTCTCAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSKRSIMLLVSP*QGIMFTGLSAA Trigger: GGCTGCTGAGAGCCCTGTGAACATGATGCCCTGGCAGGGGGACACCAACAACATGATTGACCGCTTTGATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086041.7 ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS CCA 72 bp | GATGTGCACGAACATCAAAGCGGTCAATCATGTTGTTaGTGTCCCCCTGCCAGGGCATCATGTTCACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DVHEHQSGQSCC*CPPARASCSQG Trigger: GCCCTGTGAACATGATGCCCTGGCAGGGGGACACCAACAACATGATTGACCGCTTTGATGTTCGTGCACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086041.7 ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS CAA 90 bp | GGGATGTGGTCTAGATGTGCACGAACATCAAAGCGGTCAATCATGTaGTTGGTGTCCCCCTGCCAGGGCATCATGTTCACAGGGCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GMWSRCARTSKRSIM*LVSPCQGIMFTGLS Trigger: TGAGAGCCCTGTGAACATGATGCCCTGGCAGGGGGACACCAACAACATGATTGACCGCTTTGATGTTCGTGCACATCTAGACCACATCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086041.7 ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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| CDS CAA 72 bp | TCTAGATGTGCACGAACATCAAAGCGGTCAATCATGTaGTTGGTGTCCCCCTGCCAGGGCATCATGTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: SRCARTSKRSIM*LVSPCQGIMFT Trigger: TGTGAACATGATGCCCTGGCAGGGGGACACCAACAACATGATTGACCGCTTTGATGTTCGTGCACATCTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086041.7 ENSMUST00000207524.2 ENSMUST00000207907.2 ENSMUST00000208068.2 |
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