RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLASP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033392

Ensembl transcript IDs: ENSMUST00000111838.10, ENSMUST00000163895.3, ENSMUST00000166734.10, ENSMUST00000213663.2, ENSMUST00000214522.2, ENSMUST00000215022.2, ENSMUST00000216817.2

Found 608 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGGACCCAGCGGCTGGAAGGAGCGCACCGGACTCGTGTCCCTGCTaGTCTCTCTGCTGGCTTCCCGGCTACAGCCTTGACTCACACTCG +
Preference number: 1 (lower is better)
Translates to: PDPAAGRSAPDSCPC*SLCWLPGYSLDSHS
Trigger: CGAGTGTGAGTCAAGGCTGTAGCCGGGAAGCCAGCAGAGAGAGCAGCAGGGACACGAGTCCGGTGCGCTCCTTCCAGCCGCTGGGTCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 90 bp GCGGCTGGAAGGAGCGCACCGGACTCGTGTCCCTGCTGCTCTCTCTaGTGGCTTCCCGGCTACAGCCTTGACTCACACTCGGCCGAGGAA +
Preference number: 1 (lower is better)
Translates to: AAGRSAPDSCPCCSL*WLPGYSLDSHSAEE
Trigger: TTCCTCGGCCGAGTGTGAGTCAAGGCTGTAGCCGGGAAGCCAGCAGAGAGAGCAGCAGGGACACGAGTCCGGTGCGCTCCTTCCAGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 90 bp ATCCCGGACCCAGCGGCTGGAAGGAGCGCACCGGACTCGTGTCCCTaGTGCTCTCTCTGCTGGCTTCCCGGCTACAGCCTTGACTCACAC +
Preference number: 1 (lower is better)
Translates to: IPDPAAGRSAPDSCP*CSLCWLPGYSLDSH
Trigger: GTGTGAGTCAAGGCTGTAGCCGGGAAGCCAGCAGAGAGAGCAGCAGGGACACGAGTCCGGTGCGCTCCTTCCAGCCGCTGGGTCCGGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 90 bp GACAACCGGCTGGACTGGCTGATCCCATATCCCGGACCCAGCGGCTaGAAGGAGCGCACCGGACTCGTGTCCCTGCTGCTCTCTCTGCTG +
Preference number: 1 (lower is better)
Translates to: DNRLDWLIPYPGPSG*KERTGLVSLLLSLL
Trigger: CAGCAGAGAGAGCAGCAGGGACACGAGTCCGGTGCGCTCCTTCCAGCCGCTGGGTCCGGGATATGGGATCAGCCAGTCCAGCCGGTTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 90 bp GCTGGAAGGAGCGCACCGGACTCGTGTCCCTGCTGCTCTCTCTGCTaGCTTCCCGGCTACAGCCTTGACTCACACTCGGCCGAGGAATAC +
Preference number: 1 (lower is better)
Translates to: AGRSAPDSCPCCSLC*LPGYSLDSHSAEEY
Trigger: GTATTCCTCGGCCGAGTGTGAGTCAAGGCTGTAGCCGGGAAGCCAGCAGAGAGAGCAGCAGGGACACGAGTCCGGTGCGCTCCTTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 90 bp TTTAGGACTCGCATGGCACTGACAGAGGACGACAACCGGCTGGACTaGCTGATCCCATATCCCGGACCCAGCGGCTGGAAGGAGCGCACC +
Preference number: 1 (lower is better)
Translates to: FRTRMALTEDDNRLD*LIPYPGPSGWKERT
Trigger: GGTGCGCTCCTTCCAGCCGCTGGGTCCGGGATATGGGATCAGCCAGTCCAGCCGGTTGTCGTCCTCTGTCAGTGCCATGCGAGTCCTAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 90 bp AGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTaGGAGGCGCCGTCGGCAGCACTAACTCTGTCCAGAAACATCAGC +
Preference number: 1 (lower is better)
Translates to: SVLSLRRAASCPLRD*EAPSAALTLSRNIS
Trigger: GCTGATGTTTCTGGACAGAGTTAGTGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 90 bp GCAGCACTAACTCTGTCCAGAAACATCAGCAGTGGGGTCCGCGCCTaGAGAGCCCGTCTGTGCACGCTTGATGTAAAGGTTCAGCAGCTT +
Preference number: 1 (lower is better)
Translates to: AALTLSRNISSGVRA*RARLCTLDVKVQQL
Trigger: AAGCTGCTGAACCTTTACATCAAGCGTGCACAGACGGGCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTGGACAGAGTTAGTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR TCA 90 bp AGACGTGTTGGTAGGAGAAGTAAGAGGACTGGACCAGTTGGCTGGTaGCCGAGGTGTTGGTCTCGTCAAAGGACTCCCCATGGAACTCTG +
Preference number: 1 (lower is better)
Translates to: RRVGRRSKRTGPVGW*PRCWSRQRTPHGTL
Trigger: CAGAGTTCCATGGGGAGTCCTTTGACGAGACCAACACCTCGGTCACCAGCCAACTGGTCCAGTCCTCTTACTTCTCCTACCAACACGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 90 bp CACTTCGAGAACGCTGCAGGCTTCCTGGAAGGGGGTTGGCTTTGCTaGCTCCCACAGATACTCTTCCAGCTACAGTTGAAGGATTTGCTG +
Preference number: 1 (lower is better)
Translates to: HFENAAGFLEGGWLC*LPQILFQLQLKDLL
Trigger: CAGCAAATCCTTCAACTGTAGCTGGAAGAGTATCTGTGGGAGGCAGCAAAGCCAACCCCCTTCCAGGAAGCCTGCAGCGTTCTCGAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 90 bp GCATTGAGTGGAGCAACGATGCTTTATTATCCAGAGCTGGCTGGCTaGCGTCAGCAGCATCACCTCCTGCTCTTGGATCTGACATCCCAG +
Preference number: 1 (lower is better)
Translates to: ALSGATMLYYPELAG*RQQHHLLLLDLTSQ
Trigger: CTGGGATGTCAGATCCAAGAGCAGGAGGTGATGCTGCTGACGGCAGCCAGCCAGCTCTGGATAATAAAGCATCGTTGCTCCACTCAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR TCA 90 bp ATATGGGTTATAGTCACGGGAGCGTGGAGAGGAGTGGAGTGGCATTaGGTGGAGCAACGATGCTTTATTATCCAGAGCTGGCTGGCTGCC +
Preference number: 1 (lower is better)
Translates to: IWVIVTGAWRGVEWH*VEQRCFIIQSWLAA
Trigger: GGCAGCCAGCCAGCTCTGGATAATAAAGCATCGTTGCTCCACTCAATGCCACTCCACTCCTCTCCACGCTCCCGTGACTATAACCCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 90 bp TGTCACTTCGAGAACGCTGCAGGCTTCCTGGAAGGGGGTTGGCTTTaGTGCCTCCCACAGATACTCTTCCAGCTACAGTTGAAGGATTTG +
Preference number: 1 (lower is better)
Translates to: CHFENAAGFLEGGWL*CLPQILFQLQLKDL
Trigger: CAAATCCTTCAACTGTAGCTGGAAGAGTATCTGTGGGAGGCAGCAAAGCCAACCCCCTTCCAGGAAGCCTGCAGCGTTCTCGAAGTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 90 bp TCCAGAAACATCAGCAGTGGGGTCCGCGCCTGCAGAGCCCGTCTGTaGACGCTTGATGTAAAGGTTCAGCAGCTTCATTTTACTACCAGT +
Preference number: 1 (lower is better)
Translates to: SRNISSGVRACRARL*TLDVKVQQLHFTTS
Trigger: ACTGGTAGTAAAATGAAGCTGCTGAACCTTTACATCAAGCGTGCACAGACGGGCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 90 bp AGTGGCATTGAGTGGAGCAACGATGCTTTATTATCCAGAGCTGGCTaGCTGCCGTCAGCAGCATCACCTCCTGCTCTTGGATCTGACATC +
Preference number: 1 (lower is better)
Translates to: SGIEWSNDALLSRAG*LPSAASPPALGSDI
Trigger: GATGTCAGATCCAAGAGCAGGAGGTGATGCTGCTGACGGCAGCCAGCCAGCTCTGGATAATAAAGCATCGTTGCTCCACTCAATGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 90 bp TCAGCCCTGAGAGGTAGAGTGAGAGCCCAATGGACAGAAGCCTCTTaGAGCATCTTCTCTCTCATCAGGACCCATGTTTCCAGAAGACAA +
Preference number: 1 (lower is better)
Translates to: SALRGRVRAQWTEAS*SIFSLIRTHVSRRQ
Trigger: TTGTCTTCTGGAAACATGGGTCCTGATGAGAGAGAAGATGCTGCAAGAGGCTTCTGTCCATTGGGCTCTCACTCTACCTCTCAGGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR CCA 90 bp GGGTCAGTTAAAATGTCAGCCCTGAGAGGTAGAGTGAGAGCCCAATaGACAGAAGCCTCTTGCAGCATCTTCTCTCTCATCAGGACCCAT +
Preference number: 1 (lower is better)
Translates to: GSVKMSALRGRVRAQ*TEASCSIFSLIRTH
Trigger: ATGGGTCCTGATGAGAGAGAAGATGCTGCAAGAGGCTTCTGTCCATTGGGCTCTCACTCTACCTCTCAGGGCTGACATTTTAACTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR CCA 90 bp GATGGCTCAAGGGAGTTGTACAATGTTTCAGCTTCACCAGGAAAGTaGTTCCTAAGGCCCATGTATGTCTTCCTTGCCTCCACTCTGGCC +
Preference number: 1 (lower is better)
Translates to: DGSRELYNVSASPGK*FLRPMYVFLASTLA
Trigger: GGCCAGAGTGGAGGCAAGGAAGACATACATGGGCCTTAGGAACCACTTTCCTGGTGAAGCTGAAACATTGTACAACTCCCTTGAGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR TCA 90 bp ATCTTGCTTCTCTTCTGTGCTGAAGCTGAATTGACCAGGACTCGTTaGGCACCAGAGCTCACAGTAGAGAGGGCTGTTGTGGTTAGAACT +
Preference number: 1 (lower is better)
Translates to: ILLLFCAEAELTRTR*APELTVERAVVVRT
Trigger: AGTTCTAACCACAACAGCCCTCTCTACTGTGAGCTCTGGTGCTCAACGAGTCCTGGTCAATTCAGCTTCAGCACAGAAGAGAAGCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR TCA 90 bp CATGGCTTCCTTGAGGGCAGACTTGTTGAAAGGACTGATGCTATCTaGGTAGTTATATGGGTTATAGTCACGGGAGCGTGGAGAGGAGTG +
Preference number: 1 (lower is better)
Translates to: HGFLEGRLVERTDAI*VVIWVIVTGAWRGV
Trigger: CACTCCTCTCCACGCTCCCGTGACTATAACCCATATAACTACTCAGATAGCATCAGTCCTTTCAACAAGTCTGCCCTCAAGGAAGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 90 bp AGGAATAAGTCTAGGTACATGGGTATGCCGAATAATAAATCTGATTaGTGCACATCCAGAGGTCGCCATGACTTTGGCACTATTGGGGAC +
Preference number: 1 (lower is better)
Translates to: RNKSRYMGMPNNKSD*CTSRGRHDFGTIGD
Trigger: GTCCCCAATAGTGCCAAAGTCATGGCGACCTCTGGATGTGCAGCAATCAGATTTATTATTCGGCATACCCATGTACCTAGACTTATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 90 bp AATAAGTCTAGGTACATGGGTATGCCGAATAATAAATCTGATTGCTaGACATCCAGAGGTCGCCATGACTTTGGCACTATTGGGGACAAG +
Preference number: 1 (lower is better)
Translates to: NKSRYMGMPNNKSDC*TSRGRHDFGTIGDK
Trigger: CTTGTCCCCAATAGTGCCAAAGTCATGGCGACCTCTGGATGTGCAGCAATCAGATTTATTATTCGGCATACCCATGTACCTAGACTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 90 bp CATCTTCTCTCTCATCAGGACCCATGTTTCCAGAAGACAATTTCATaGTCAAAGGAAACCAGGTTCCACCATTCAACAAAAAGGTGCTGG +
Preference number: 1 (lower is better)
Translates to: HLLSHQDPCFQKTIS*SKETRFHHSTKRCW
Trigger: CCAGCACCTTTTTGTTGAATGGTGGAACCTGGTTTCCTTTGACCATGAAATTGTCTTCTGGAAACATGGGTCCTGATGAGAGAGAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR GCA 90 bp GGTCTCCTTGGATACTCTCTCTATCACTTTTGTTTGCATTTTGATTaGAGCCAGATTAATAGGGTAGTCAGCGGTTTGTATGATGGGACA +
Preference number: 1 (lower is better)
Translates to: GLLGYSLYHFCLHFD*SQINRVVSGLYDGT
Trigger: TGTCCCATCATACAAACCGCTGACTACCCTATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTATCCAAGGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 90 bp TCATGGTCAAAGGAAACCAGGTTCCACCATTCAACAAAAAGGTGCTaGTTGACTCCCATGTCAATAATTAGTTTATCAAATGAGAAACAG +
Preference number: 1 (lower is better)
Translates to: SWSKETRFHHSTKRC*LTPMSIISLSNEKQ
Trigger: CTGTTTCTCATTTGATAAACTAATTATTGACATGGGAGTCAACCAGCACCTTTTTGTTGAATGGTGGAACCTGGTTTCCTTTGACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR TCA 90 bp GTTCCAAATCACCAAATTTGGCCTTTCACCCAAACTGGTAATATTTaGAAGTTGGCTGCACACGAAAATAACTTTAGCAGAGGTGATTTA +
Preference number: 1 (lower is better)
Translates to: VPNHQIWPFTQTGNI*KLAAHENNFSRGDL
Trigger: TAAATCACCTCTGCTAAAGTTATTTTCGTGTGCAGCCAACTTTCAAATATTACCAGTTTGGGTGAAAGGCCAAATTTGGTGATTTGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR-3UTR CCA 90 bp GTCCAGAAACATCAGCAGTGGGGTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTTTATCCAGAGCTGGCTaGCTGCCGTCAGCAGCATCA +
Preference number: 2 (lower is better)
Translates to: VQKHQQWGPRLQSPSVHALSRAG*LPSAAS
Trigger: TGATGCTGCTGACGGCAGCCAGCCAGCTCTGGATAA...AGCGTGCACAGACGGGCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CCA 90 bp GTCCAGAAACATCAGCAGTGGGGTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTATAGTCACGGGAGCGTaGAGAGGAGTGGAGTGGCAT +
Preference number: 2 (lower is better)
Translates to: VQKHQQWGPRLQSPSVHAIVTGA*RGVEWH
Trigger: ATGCCACTCCACTCCTCTCCACGCTCCCGTGACTAT...AGCGTGCACAGACGGGCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR TCA 90 bp ACAGAGGACGACAACCGGCTGGACTGGCTGATCCCATATCCCGGACCCAGCGGCTGTCTTTCCAGTGAATaGGTCTGCCATTCTTGCAGC +
Preference number: 2 (lower is better)
Translates to: TEDDNRLDWLIPYPGPSGCLSSE*VCHSCS
Trigger: GCTGCAAGAATGGCAGACTCATTCACTGGAAAGACA...GCCGCTGGGTCCGGGATATGGGATCAGCCAGTCCAGCCGGTTGTCGTCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR GCA 90 bp GTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTTGATGTAAAGGTTCAGCAGCTTGGGGGTTGGCTTTGCTaGCTCCCACAGATACTCTTC +
Preference number: 2 (lower is better)
Translates to: VRACRARLCTLDVKVQQLGGWLC*LPQILF
Trigger: GAAGAGTATCTGTGGGAGGCAGCAAAGCCAACCCCC...AAGCTGCTGAACCTTTACATCAAGCGTGCACAGACGGGCTCTGCAGGCGCGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR TCA 90 bp AGAGCTTTTGGGCTCTGTCGTCCAAGTGATGACCCGAGACACTGCCAGGCGAGTGTGCTGAAGCTGAATTaGCCAGGACTCGTTGAGCAC +
Preference number: 2 (lower is better)
Translates to: RAFGLCRPSDDPRHCQASVLKLN*PGLVEH
Trigger: GTGCTCAACGAGTCCTGGTCAATTCAGCTTCAGCAC...ACTCGCCTGGCAGTGTCTCGGGTCATCACTTGGACGACAGAGCCCAAAAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CAA 90 bp TATCCAGAGCTGGCTGGCTGCCGTCAGCAGCATCACCTCCTGCTCTaGGATCTGACATCCCAGGACCACTACATATTGTGTCACCATCCT +
Preference number: 2 (lower is better)
Translates to: YPELAGCRQQHHLLL*DLTSQDHYILCHHP
Trigger: AGGATGGTGACACAATATGTAGTGGTCCTGGGATGTCAGATCCAAGAGCAGGAGGTGATGCTGCTGACGGCAGCCAGCCAGCTCTGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CCA 90 bp AAATCAGCACTGACTGCGCTGCCTTCCGAACATCAGAGCTTTTGGGCTCTGTCGAGCGCATTGGCACGCTaGTCCCAGTCATGTTTGTCA +
Preference number: 2 (lower is better)
Translates to: KSALTALPSEHQSFWALSSALAR*SQSCLS
Trigger: TGACAAACATGACTGGGACCAGCGTGCCAATGCGCT...CGACAGAGCCCAAAAGCTCTGATGTTCGGAAGGCAGCGCAGTCAGTGCTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CCA 90 bp GTCCAGAAACATCAGCAGTGGGGTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTAACAAACGTAGGTGCTaGAAAAAGCAATCATACTGT +
Preference number: 2 (lower is better)
Translates to: VQKHQQWGPRLQSPSVHANKRRC*KKQSYC
Trigger: ACAGTATGATTGCTTTTTCCAGCACCTACGTTTGTT...AGCGTGCACAGACGGGCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CAA 90 bp ATGTCACTTCGAGAACGCTGCAGGCTTCCTGGAAGGGGGTTGGCTTaGCTGCCTCCCACAGATACTCTTCCAGCTACAGTTGAAGGATTT +
Preference number: 2 (lower is better)
Translates to: MSLRERCRLPGRGLA*LPPTDTLPATVEGF
Trigger: AAATCCTTCAACTGTAGCTGGAAGAGTATCTGTGGGAGGCAGCAAAGCCAACCCCCTTCCAGGAAGCCTGCAGCGTTCTCGAAGTGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CAA 90 bp GAGTCGGTCTTGGCATTTCCCACAGCAACAAGCGGTGTAGAAAGCTaGGCTCTCACCCGACCATCATCAGATGCTGTTCCATCCATCTTG +
Preference number: 2 (lower is better)
Translates to: ESVLAFPTATSGVES*ALTRPSSDAVPSIL
Trigger: CAAGATGGATGGAACAGCATCTGATGATGGTCGGGTGAGAGCCAAGCTTTCTACACCGCTTGTTGCTGTGGGAAATGCCAAGACCGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR TCA 90 bp AGAGCTTTTGGGCTCTGTCGTCCAAGTGATGACCCGAGACACTGCCAGGCGAGTAAGACTGTTGAAAGGTaGGCAACAGTGATGCAAGCT +
Preference number: 2 (lower is better)
Translates to: RAFGLCRPSDDPRHCQASKTVER*ATVMQA
Trigger: AGCTTGCATCACTGTTGCTCACCTTTCAACAGTCTT...ACTCGCCTGGCAGTGTCTCGGGTCATCACTTGGACGACAGAGCCCAAAAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR GCA 90 bp CACTGCATGGACAGCCACCAGGCAGAAGACACAAGCTTTCCGGACACTGCTTTCGCTGAAATTCTGGATTaGCTCAGTGACGCCTCTAAG +
Preference number: 2 (lower is better)
Translates to: HCMDSHQAEDTSFPDTAFAEILD*LSDASK
Trigger: CTTAGAGGCGTCACTGAGGCAATCCAGAATTTCAGC...GAAAGCAGTGTCCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTCCATGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CCA 90 bp CACTGCATGGACAGCCACCAGGCAGAAGACACAAGCTTTCCGGACACTGCTTTCGCTTCACCAGGAAAGTaGTTCCTAAGGCCCATGTAT +
Preference number: 2 (lower is better)
Translates to: HCMDSHQAEDTSFPDTAFASPGK*FLRPMY
Trigger: ATACATGGGCCTTAGGAACCACTTTCCTGGTGAAGC...GAAAGCAGTGTCCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTCCATGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR GCA 90 bp GTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTTGATGTAAAGGTTCAGCAGCTTTCCAACAAACGTAGGTaGTGGAAAAAGCAATCATAC +
Preference number: 2 (lower is better)
Translates to: VRACRARLCTLDVKVQQLSNKRR*WKKQSY
Trigger: GTATGATTGCTTTTTCCAGCACCTACGTTTGTTGGA...AAGCTGCTGAACCTTTACATCAAGCGTGCACAGACGGGCTCTGCAGGCGCGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR GCA 90 bp GTCGGTCTTGGCATTTCCCACAGCAACAAGCGGTGTAGAAAGCTTGGCTCTCACCCGACCATCATCAGATaGTGTTCCATCCATCTTGTC +
Preference number: 2 (lower is better)
Translates to: VGLGISHSNKRCRKLGSHPTIIR*CSIHLV
Trigger: GACAAGATGGATGGAACAGCATCTGATGATGGTCGG...GTGAGAGCCAAGCTTTCTACACCGCTTGTTGCTGTGGGAAATGCCAAGACCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR TCA 90 bp CACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCAAAGTTACATGCAGACTaGGGACACCCCTCTGTTACA +
Preference number: 2 (lower is better)
Translates to: HRVWLECHVALLCLTLLSKLHAD*GHPSVT
Trigger: TGTAACAGAGGGGTGTCCTCAGTCTGCATGTAACTT...TGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
3UTR-3UTR TCA 90 bp GTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTTGATGTAAAGGTTCAGCAGCTTGTCATGTTTGTCATCTaGCAAAATTTCCCTGATCTT +
Preference number: 2 (lower is better)
Translates to: VRACRARLCTLDVKVQQLVMFVI*QNFPDL
Trigger: AAGATCAGGGAAATTTTGTCAGATGACAAACATGAC...AAGCTGCTGAACCTTTACATCAAGCGTGCACAGACGGGCTCTGCAGGCGCGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR TCA 90 bp CACTGCATGGACAGCCACCAGGCAGAAGACACAAGCTTTCCGGACACTGCTTTCTCAGCATCAGCATCATaGATGCCCTTCTTAATCGTT +
Preference number: 2 (lower is better)
Translates to: HCMDSHQAEDTSFPDTAFSASAS*MPFLIV
Trigger: AACGATTAAGAAGGGCATTCATGATGCTGATGCTGA...GAAAGCAGTGTCCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTCCATGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR TCA 90 bp ACATATTGTGTCACCATCCTCCTTTTTAGGGTCCCTCCTCACTGGCTCACTCATTTGACCAGGACTCGTTaGGCACCAGAGCTCACAGTA +
Preference number: 2 (lower is better)
Translates to: TYCVTILLFRVPPHWLTHLTRTR*APELTV
Trigger: TACTGTGAGCTCTGGTGCTCAACGAGTCCTGGTCAA...ATGAGTGAGCCAGTGAGGAGGGACCCTAAAAAGGAGGATGGTGACACAATATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR GCA 90 bp GTAAAATCTCTTGGGTCCATCTGCTTTGCCAGAGTTTCTATGTACTTAAGGATAGGCTGGCCTCTCTGCTaGAGCCCTGGCTCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: VKSLGSICFARVSMYLRIGWPLC*SPGSLG
Trigger: TCCCAAGGAGCCAGGGCTGCAGCAGAGAGGCCAGCC...TATCCTTAAGTACATAGAAACTCTGGCAAAGCAGATGGACCCAAGAGATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR GCA 90 bp TGCACGCTTGATGTAAAGGTTCAGCAGCTTCATTTTACTACCAGTGAGTTGACTGACTCGTGTCCCTGCTaGTCTCTCTGCTGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: CTLDVKVQQLHFTTSELTDSCPC*SLCWLP
Trigger: GGGAAGCCAGCAGAGAGAGCAGCAGGGACACGAGTC...AGTCAACTCACTGGTAGTAAAATGAAGCTGCTGAACCTTTACATCAAGCGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR GCA 90 bp CATGGAACTCTGGGTGCCATTGCCAGTGTTCCGGAGGTGATTGTGAAGAAGTTTGAAATCAGCACTGACTaGGCTGCCTTCCGAACATCA +
Preference number: 2 (lower is better)
Translates to: HGTLGAIASVPEVIVKKFEISTD*AAFRTS
Trigger: TGATGTTCGGAAGGCAGCGCAGTCAGTGCTGATTTC...AAACTTCTTCACAATCACCTCCGGAACACTGGCAATGGCACCCAGAGTTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR GCA 90 bp CACTGCATGGACAGCCACCAGGCAGAAGACACAAGCTTTCCGGACACTGCTTTCAGCACTTTGATGCACTaGTCTGGACTAATGGAAGTA +
Preference number: 2 (lower is better)
Translates to: HCMDSHQAEDTSFPDTAFSTLMH*SGLMEV
Trigger: TACTTCCATTAGTCCAGAGCAGTGCATCAAAGTGCT...GAAAGCAGTGTCCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTCCATGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CAA 90 bp ATCCTCCTTTTTAGGGTCCCTCCTCACTGGCTCACTCATATCTTCTaGGCTTCTGAAGCTGAAATTCTGGATTGCCTCAGTGACGCCTCT +
Preference number: 2 (lower is better)
Translates to: ILLFRVPPHWLTHIF*ASEAEILDCLSDAS
Trigger: AGAGGCGTCACTGAGGCAATCCAGAATTTCAGCTTCAGAAGCCAAGAAGATATGAGTGAGCCAGTGAGGAGGGACCCTAAAAAGGAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR TCA 90 bp CACTGCATGGACAGCCACCAGGCAGAAGACACAAGCTTTCCGGACACTGCTTTCCTTCCAGTGTTTTCATaGCAGTTAGTTCTGCATAGT +
Preference number: 2 (lower is better)
Translates to: HCMDSHQAEDTSFPDTAFLPVFS*QLVLHS
Trigger: ACTATGCAGAACTAACTGTCATGAAAACACTGGAAG...GAAAGCAGTGTCCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTCCATGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR GCA 90 bp CCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCTATCATAAAGTTACATaGAGACTGAGGACACCCCTC +
Preference number: 2 (lower is better)
Translates to: PQSLAGVPRSPALSHIIVYHKVT*RLRTPL
Trigger: GAGGGGTGTCCTCAGTCTGCATGTAACTTTATGATA...GACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
3UTR-3UTR GCA 90 bp CATGGAACTCTGGGTGCCATTGCCAGTGTTCCGGAGGTGATTGTGAAGAAGTTTTCTGTTGAGGACTTCTaGCACGTCTTCTGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: HGTLGAIASVPEVIVKKFSVEDF*HVFCLS
Trigger: AGACAGACAGAAGACGTGGCAGAAGTCCTCAACAGA...AAACTTCTTCACAATCACCTCCGGAACACTGGCAATGGCACCCAGAGTTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR GCA 90 bp GTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTTGATGTAAAGGTTCAGCAGCTTTGTTTGCATTTTGATTaGAGCCAGATTAATAGGGTA +
Preference number: 2 (lower is better)
Translates to: VRACRARLCTLDVKVQQLCLHFD*SQINRV
Trigger: TACCCTATTAATCTGGCTGCAATCAAAATGCAAACA...AAGCTGCTGAACCTTTACATCAAGCGTGCACAGACGGGCTCTGCAGGCGCGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CCA 90 bp ACTGTTACAGTAGGGAGAGGGTGTGGAGTAATATCTCTTCTTGCTGCTAAAACGCCTAGGCAGGTGATCTaGTGCAGCTTTCTTACGGGG +
Preference number: 2 (lower is better)
Translates to: TVTVGRGCGVISLLAAKTPRQVI*CSFLTG
Trigger: CCCCGTAAGAAAGCTGCACCAGATCACCTGCCTAGG...CGTTTTAGCAGCAAGAAGAGATATTACTCCACACCCTCTCCCTACTGTAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR CAA 90 bp AGCGCACATCCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTaGTCTCACATTATTGTCAGTATTTCTAGCATAGGACATGATACA +
Preference number: 2 (lower is better)
Translates to: SAHPQSLAGVPRSPA*SHIIVSISSIGHDT
Trigger: TGTATCATGTCCTATGCTAGAAATACTGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGGATGTGCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
3UTR-3UTR TCA 90 bp GGAAGCGGGTCAGTTAAAATGTCAGCCCTGAGAGGTAGAGTGAGAGCCCAATGGAGACACACATGCACTTaGTTTTTCTCATCTGTTTCC +
Preference number: 2 (lower is better)
Translates to: GSGSVKMSALRGRVRAQWRHTCT*FFSSVS
Trigger: GGAAACAGATGAGAAAAATCAAGTGCATGTGTGTCT...CCATTGGGCTCTCACTCTACCTCTCAGGGCTGACATTTTAACTGACCCGCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR-3UTR TCA 90 bp CACTGCATGGACAGCCACCAGGCAGAAGACACAAGCTTTCCGGACACTGCTTTCAGGACTGATGCTATCTaGGTAGTTATATGGGTTATA +
Preference number: 2 (lower is better)
Translates to: HCMDSHQAEDTSFPDTAFRTDAI*VVIWVI
Trigger: TATAACCCATATAACTACTCAGATAGCATCAGTCCT...GAAAGCAGTGTCCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTCCATGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR TCA 90 bp ACATATTGTGTCACCATCCTCCTTTTTAGGGTCCCTCCTCACTGGCTCACTCATTCCAGCAACAAGCAGTaGTCTGATTTTCTTAAGCGC +
Preference number: 2 (lower is better)
Translates to: TYCVTILLFRVPPHWLTHSSNKQ*SDFLKR
Trigger: GCGCTTAAGAAAATCAGATCACTGCTTGTTGCTGGA...ATGAGTGAGCCAGTGAGGAGGGACCCTAAAAAGGAGGATGGTGACACAATATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR TCA 90 bp TGCACGCTTGATGTAAAGGTTCAGCAGCTTCATTTTACTACCAGTGAGTTGACTATCCAGAGGTCGCCATaGCTTTGGCACTATTGGGGA +
Preference number: 2 (lower is better)
Translates to: CTLDVKVQQLHFTTSELTIQRSP*LWHYWG
Trigger: TCCCCAATAGTGCCAAAGTCATGGCGACCTCTGGAT...AGTCAACTCACTGGTAGTAAAATGAAGCTGCTGAACCTTTACATCAAGCGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR GCA 90 bp TGCACGCTTGATGTAAAGGTTCAGCAGCTTCATTTTACTACCAGTGAGTTGACTCATGTATGTCTTCCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: CTLDVKVQQLHFTTSELTHVCLP*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGGAAGACATACATG...AGTCAACTCACTGGTAGTAAAATGAAGCTGCTGAACCTTTACATCAAGCGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CAA 90 bp CGAATAATAAATCTGATTGCTGCACATCCAGAGGTCGCCATGACTTaGGCACTATTGGGGACAAGATTAAAAAGCGTAGGGACGATGGCT +
Preference number: 2 (lower is better)
Translates to: RIINLIAAHPEVAMT*ALLGTRLKSVGTMA
Trigger: AGCCATCGTCCCTACGCTTTTTAATCTTGTCCCCAATAGTGCCAAAGTCATGGCGACCTCTGGATGTGCAGCAATCAGATTTATTATTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR TCA 90 bp CGGGGTAAAAGAAGGGACACGGCTTTAAATAAAGGTGGCAAGATCAAGAACCGAAACTGGCTGGTTCCATaGCATTTCTCATTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: RGKRRDTALNKGGKIKNRNWLVP*HFSLRS
Trigger: TGACCTCAATGAGAAATGTCATGGAACCAGCCAGTT...TCGGTTCTTGATCTTGCCACCTTTATTTAAAGCCGTGTCCCTTCTTTTACCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
3UTR-3UTR TCA 90 bp TTCCCGGCCTTGGGGATACTGAGGCACTCACTGTCATCTGACAAAATTGGTATCTATTTAAGAGTCAGATaGATAGACACCCTGCATCAA +
Preference number: 2 (lower is better)
Translates to: FPALGILRHSLSSDKIGIYLRVR*IDTLHQ
Trigger: TTGATGCAGGGTGTCTATTCATCTGACTCTTAAATA...GATACCAATTTTGTCAGATGACAGTGAGTGCCTCAGTATCCCCAAGGCCGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
3UTR CAA 90 bp ATTAGACCCGGCATGATCTCTGGTAAGAGCATGTTAAGGGTCTCCTaGGATACTCTCTCTATCACTTTTGTTTGCATTTTGATTGCAGCC +
Preference number: 2 (lower is better)
Translates to: IRPGMISGKSMLRVS*DTLSITFVCILIAA
Trigger: GGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTATCCAAGGAGACCCTTAACATGCTCTTACCAGAGATCATGCCGGGTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR TCA 90 bp TGCACGCTTGATGTAAAGGTTCAGCAGCTTCATTTTACTACCAGTGAGTTGACTGTTTCCCAAGACTGTTaGAAGGTGAGCAACAGTGAT +
Preference number: 2 (lower is better)
Translates to: CTLDVKVQQLHFTTSELTVSQDC*KVSNSD
Trigger: ATCACTGTTGCTCACCTTTCAACAGTCTTGGGAAAC...AGTCAACTCACTGGTAGTAAAATGAAGCTGCTGAACCTTTACATCAAGCGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CAA 90 bp GAGCATGTTAAGGGTCTCCTTGGATACTCTCTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAGATTAATAGGGTAGTCAGCGGTTTG +
Preference number: 2 (lower is better)
Translates to: EHVKGLLGYSLYHFC*HFDCSQINRVVSGL
Trigger: CAAACCGCTGACTACCCTATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTATCCAAGGAGACCCTTAACATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CAA 90 bp AAAGTTTTTGGTAAAGCTCCTAGTAACATTGTAAACTCTGGGGTATaGAGTTCAAATAAAGAAATCAGCACTGACTGCGCTGCCTTCCGA +
Preference number: 2 (lower is better)
Translates to: KVFGKAPSNIVNSGV*SSNKEISTDCAAFR
Trigger: TCGGAAGGCAGCGCAGTCAGTGCTGATTTCTTTATTTGAACTCAATACCCCAGAGTTTACAATGTTACTAGGAGCTTTACCAAAAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CCA 90 bp CAGAATTCATGTTCTCTGTATCGTAATCAAATGCACTTGGAGATAACGTATTCTGACTTTCTTGTGAGCTaGATGAGGACCTGTCTGACT +
Preference number: 2 (lower is better)
Translates to: QNSCSLYRNQMHLEITYSDFLVS*MRTCLT
Trigger: AGTCAGACAGGTCCTCATCCAGCTCACAAGAAAGTC...AGAATACGTTATCTCCAAGTGCATTTGATTACGATACAGAGAACATGAATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR GCA 90 bp TGCACGCTTGATGTAAAGGTTCAGCAGCTTCATTTTACTACCAGTGAGTTGACTTCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: CTLDVKVQQLHFTTSELTSITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...AGTCAACTCACTGGTAGTAAAATGAAGCTGCTGAACCTTTACATCAAGCGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CCA 90 bp CAGAATTCATGTTCTCTGTATCGTAATCAAATGCACTTGGAGATAACGTATTCTTTCAAGCTTGGCGTTTaGGTCTGGTCAACTGTAAAT +
Preference number: 2 (lower is better)
Translates to: QNSCSLYRNQMHLEITYSFKLGV*VWSTVN
Trigger: ATTTACAGTTGACCAGACCCAAACGCCAAGCTTGAA...AGAATACGTTATCTCCAAGTGCATTTGATTACGATACAGAGAACATGAATTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR TCA 90 bp CAGAATTCATGTTCTCTGTATCGTAATCAAATGCACTTGGAGATAACGTATTCTACAAACAACCAATCTTaGAGATCATCTTTGTGGACT +
Preference number: 2 (lower is better)
Translates to: QNSCSLYRNQMHLEITYSTNNQS*RSSLWT
Trigger: AGTCCACAAAGATGATCTTCAAGATTGGTTGTTTGT...AGAATACGTTATCTCCAAGTGCATTTGATTACGATACAGAGAACATGAATTCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 72 bp TACAGCCTTGACTCACACTCGGCCGAGGAATACGGCTaGTCCGGGCCACTGAGAGCCGAGATGGGCTGGCCT +
Preference number: 3 (lower is better)
Translates to: YSLDSHSAEEYG*SGPLRAEMGWP
Trigger: AGGCCAGCCCATCTCGGCTCTCAGTGGCCCGGAGCAGCCGTATTCCTCGGCCGAGTGTGAGTCAAGGCTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 72 bp AGGAGCGCACCGGACTCGTGTCCCTGCTGCTCTCTCTaGTGGCTTCCCGGCTACAGCCTTGACTCACACTCG +
Preference number: 3 (lower is better)
Translates to: RSAPDSCPCCSL*WLPGYSLDSHS
Trigger: CGAGTGTGAGTCAAGGCTGTAGCCGGGAAGCCAGCAGAGAGAGCAGCAGGGACACGAGTCCGGTGCGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 72 bp CGCATGGCACTGACAGAGGACGACAACCGGCTGGACTaGCTGATCCCATATCCCGGACCCAGCGGCTGGAAG +
Preference number: 3 (lower is better)
Translates to: RMALTEDDNRLD*LIPYPGPSGWK
Trigger: CTTCCAGCCGCTGGGTCCGGGATATGGGATCAGCCAGTCCAGCCGGTTGTCGTCCTCTGTCAGTGCCATGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 72 bp GTCGGCAGCACTAACTCTGTCCAGAAACATCAGCAGTaGGGTCCGCGCCTGCAGAGCCCGTCTGTGCACGCT +
Preference number: 3 (lower is better)
Translates to: VGSTNSVQKHQQ*GPRLQSPSVHA
Trigger: AGCGTGCACAGACGGGCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTGGACAGAGTTAGTGCTGCCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 72 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTaGGAGGCGCCGTCGGCAGCACTAACTCTGTCCAGA +
Preference number: 3 (lower is better)
Translates to: SLRRAASCPLRD*EAPSAALTLSR
Trigger: TCTGGACAGAGTTAGTGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp GTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTTGATGTAAAGGTTCAGCAGCTTATTGACCAGGACTCGTaGAGCACCAGAGCTCACAGT +
Preference number: 3 (lower is better)
Translates to: VRACRARLCTLDVKVQQLIDQDS*STRAHS
Trigger: ACTGTGAGCTCTGGTGCTCAACGAGTCCTGGTCAAT...AAGCTGCTGAACCTTTACATCAAGCGTGCACAGACGGGCTCTGCAGGCGCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 72 bp GAGAACGCTGCAGGCTTCCTGGAAGGGGGTTGGCTTTaGTGCCTCCCACAGATACTCTTCCAGCTACAGTTG +
Preference number: 3 (lower is better)
Translates to: ENAAGFLEGGWL*CLPQILFQLQL
Trigger: CAACTGTAGCTGGAAGAGTATCTGTGGGAGGCAGCAAAGCCAACCCCCTTCCAGGAAGCCTGCAGCGTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 72 bp ACTCTGTCCAGAAACATCAGCAGTGGGGTCCGCGCCTaGAGAGCCCGTCTGTGCACGCTTGATGTAAAGGTT +
Preference number: 3 (lower is better)
Translates to: TLSRNISSGVRA*RARLCTLDVKV
Trigger: AACCTTTACATCAAGCGTGCACAGACGGGCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTGGACAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp GTCCAGAAACATCAGCAGTGGGGTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTGAAGAAAAAGGACGATaGAGACTTTCTTGTGAGCTG +
Preference number: 3 (lower is better)
Translates to: VQKHQQWGPRLQSPSVHAEEKGR*RLSCEL
Trigger: CAGCTCACAAGAAAGTCTCAATCGTCCTTTTTCTTC...AGCGTGCACAGACGGGCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp GTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTTGATGTAAAGGTTCAGCAGCTTTGGCTCCTTGGGATCTaGCTTCTCTTCTGTGCTGAA +
Preference number: 3 (lower is better)
Translates to: VRACRARLCTLDVKVQQLWLLGI*LLFCAE
Trigger: TTCAGCACAGAAGAGAAGCAAGATCCCAAGGAGCCA...AAGCTGCTGAACCTTTACATCAAGCGTGCACAGACGGGCTCTGCAGGCGCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp GTCCAGAAACATCAGCAGTGGGGTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTAAGATCATCAGGAAATaGGTCGGCGTCATCATCAAA +
Preference number: 3 (lower is better)
Translates to: VQKHQQWGPRLQSPSVHAKIIRK*VGVIIK
Trigger: TTTGATGATGACGCCGACCAATTTCCTGATGATCTT...AGCGTGCACAGACGGGCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp GTCCAGAAACATCAGCAGTGGGGTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTATGTTAAGGGTCTCCTaGGATACTCTCTCTATCACT +
Preference number: 3 (lower is better)
Translates to: VQKHQQWGPRLQSPSVHAMLRVS*DTLSIT
Trigger: AGTGATAGAGAGAGTATCCAAGGAGACCCTTAACAT...AGCGTGCACAGACGGGCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR TCA 72 bp TGGGGTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTTaGTGTAAAGGTTCAGCAGCTTCATTTTACTACCAG +
Preference number: 3 (lower is better)
Translates to: WGPRLQSPSVHA*CKGSAASFYYQ
Trigger: CTGGTAGTAAAATGAAGCTGCTGAACCTTTACATCAAGCGTGCACAGACGGGCTCTGCAGGCGCGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 72 bp AACGCTGCAGGCTTCCTGGAAGGGGGTTGGCTTTGCTaGCTCCCACAGATACTCTTCCAGCTACAGTTGAAG +
Preference number: 3 (lower is better)
Translates to: NAAGFLEGGWLC*LPQILFQLQLK
Trigger: CTTCAACTGTAGCTGGAAGAGTATCTGTGGGAGGCAGCAAAGCCAACCCCCTTCCAGGAAGCCTGCAGCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 72 bp ATCAGCAGTGGGGTCCGCGCCTGCAGAGCCCGTCTGTaGACGCTTGATGTAAAGGTTCAGCAGCTTCATTTT +
Preference number: 3 (lower is better)
Translates to: ISSGVRACRARL*TLDVKVQQLHF
Trigger: AAAATGAAGCTGCTGAACCTTTACATCAAGCGTGCACAGACGGGCTCTGCAGGCGCGGACCCCACTGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 72 bp GAGTGGAGCAACGATGCTTTATTATCCAGAGCTGGCTaGCTGCCGTCAGCAGCATCACCTCCTGCTCTTGGA +
Preference number: 3 (lower is better)
Translates to: EWSNDALLSRAG*LPSAASPPALG
Trigger: TCCAAGAGCAGGAGGTGATGCTGCTGACGGCAGCCAGCCAGCTCTGGATAATAAAGCATCGTTGCTCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 72 bp CGAGCATCAGCGCACATCCACAGAGTCTGGCTGGAGTaGCACGTAGCCCTGCTTTGTCTCACATTATTGTCA +
Preference number: 3 (lower is better)
Translates to: RASAHIHRVWLE*HVALLCLTLLS
Trigger: TGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGGATGTGCGCTGATGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
3UTR-3UTR CAA 90 bp TGTTGGTCTCGTCAAAGGACTCCCCATGGAACTCTGGGTGCCATTGCCAGTGTTTTGAGTGTCCTTTCCTaGAGGAGGGCAGCCAGTTGT +
Preference number: 3 (lower is better)
Translates to: CWSRQRTPHGTLGAIASVLSVLS*RRAASC
Trigger: ACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAA...AACACTGGCAATGGCACCCAGAGTTCCATGGGGAGTCCTTTGACGAGACCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp GTCCGCGCCTGCAGAGCCCGTCTGTGCACGCTTGATGTAAAGGTTCAGCAGCTTTTGAGGGCAGACTTGTaGAAAGGACTGATGCTATCT +
Preference number: 3 (lower is better)
Translates to: VRACRARLCTLDVKVQQLLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCTTTCAACAAGTCTGCCCTCAA...AAGCTGCTGAACCTTTACATCAAGCGTGCACAGACGGGCTCTGCAGGCGCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR TCA 72 bp ATAGTCACGGGAGCGTGGAGAGGAGTGGAGTGGCATTaGGTGGAGCAACGATGCTTTATTATCCAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: IVTGAWRGVEWH*VEQRCFIIQSW
Trigger: CCAGCTCTGGATAATAAAGCATCGTTGCTCCACTCAATGCCACTCCACTCCTCTCCACGCTCCCGTGACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp TGTTGGTCTCGTCAAAGGACTCCCCATGGAACTCTGGGTGCCATTGCCAGTGTTGGGCTTTCTGAACTTTaGCCTGAACAGAGCCAAGCA +
Preference number: 3 (lower is better)
Translates to: CWSRQRTPHGTLGAIASVGLSEL*PEQSQA
Trigger: TGCTTGGCTCTGTTCAGGCAAAAGTTCAGAAAGCCC...AACACTGGCAATGGCACCCAGAGTTCCATGGGGAGTCCTTTGACGAGACCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp CACTGCATGGACAGCCACCAGGCAGAAGACACAAGCTTTCCGGACACTGCTTTCTCCTTGAGGGCAGACTaGTTGAAAGGACTGATGCTA +
Preference number: 3 (lower is better)
Translates to: HCMDSHQAEDTSFPDTAFSLRAD*LKGLML
Trigger: TAGCATCAGTCCTTTCAACAAGTCTGCCCTCAAGGA...GAAAGCAGTGTCCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTCCATGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp TGTTGGTCTCGTCAAAGGACTCCCCATGGAACTCTGGGTGCCATTGCCAGTGTTTTCCTCTCTGACCAATaGGAGCTAGCACATCTGTTG +
Preference number: 3 (lower is better)
Translates to: CWSRQRTPHGTLGAIASVFLSDQ*ELAHLL
Trigger: CAACAGATGTGCTAGCTCCAATTGGTCAGAGAGGAA...AACACTGGCAATGGCACCCAGAGTTCCATGGGGAGTCCTTTGACGAGACCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 72 bp AGAGGTAGAGTGAGAGCCCAATGGACAGAAGCCTCTTaGAGCATCTTCTCTCTCATCAGGACCCATGTTTCC +
Preference number: 3 (lower is better)
Translates to: RGRVRAQWTEAS*SIFSLIRTHVS
Trigger: GGAAACATGGGTCCTGATGAGAGAGAAGATGCTGCAAGAGGCTTCTGTCCATTGGGCTCTCACTCTACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR CCA 72 bp CTGAGATGTGGCTTTAGTTCATCACCAATCACTGCATaGACAGCCACCAGGCAGAAGACACAAGCTTTCCGG +
Preference number: 3 (lower is better)
Translates to: LRCGFSSSPITA*TATRQKTQAFR
Trigger: CCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTCCATGCAGTGATTGGTGATGAACTAAAGCCACATCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp AGAGCTTTTGGGCTCTGTCGTCCAAGTGATGACCCGAGACACTGCCAGGCGAGTTTACAGGAACTGACTTaGATGTGCAGTTGCTTGTTA +
Preference number: 3 (lower is better)
Translates to: RAFGLCRPSDDPRHCQASLQELT*MCSCLL
Trigger: TAACAAGCAACTGCACATCAAAGTCAGTTCCTGTAA...ACTCGCCTGGCAGTGTCTCGGGTCATCACTTGGACGACAGAGCCCAAAAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 72 bp AAAATGTCAGCCCTGAGAGGTAGAGTGAGAGCCCAATaGACAGAAGCCTCTTGCAGCATCTTCTCTCTCATC +
Preference number: 3 (lower is better)
Translates to: KMSALRGRVRAQ*TEASCSIFSLI
Trigger: GATGAGAGAGAAGATGCTGCAAGAGGCTTCTGTCCATTGGGCTCTCACTCTACCTCTCAGGGCTGACATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR-3UTR CAA 90 bp CGGGGTAAAAGAAGGGACACGGCTTTAAATAAAGGTGGCAAGATCAAGAACCGATTGAGTGTCCTTTCCTaGAGGAGGGCAGCCAGTTGT +
Preference number: 3 (lower is better)
Translates to: RGKRRDTALNKGGKIKNRLSVLS*RRAASC
Trigger: ACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAA...TCGGTTCTTGATCTTGCCACCTTTATTTAAAGCCGTGTCCCTTCTTTTACCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
3UTR GCA 72 bp GCGGTTTGTATGATGGGACAAAGCACTTTGATGCACTaGTCTGGACTAATGGAAGTAGCCAATACGGAGGCA +
Preference number: 3 (lower is better)
Translates to: AVCMMGQSTLMH*SGLMEVANTEA
Trigger: TGCCTCCGTATTGGCTACTTCCATTAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCCATCATACAAACCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 72 bp CAGCCACCAGGCAGAAGACACAAGCTTTCCGGACACTaGTTTCTGAATTATCATAACCCTGTATTAGACCCG +
Preference number: 3 (lower is better)
Translates to: QPPGRRHKLSGH*FLNYHNPVLDP
Trigger: CGGGTCTAATACAGGGTTATGATAATTCAGAAAGCAGTGTCCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 72 bp AGGGAGTTGTACAATGTTTCAGCTTCACCAGGAAAGTaGTTCCTAAGGCCCATGTATGTCTTCCTTGCCTCC +
Preference number: 3 (lower is better)
Translates to: RELYNVSASPGK*FLRPMYVFLAS
Trigger: GGAGGCAAGGAAGACATACATGGGCCTTAGGAACCACTTTCCTGGTGAAGCTGAAACATTGTACAACTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp GGAAGCGGGTCAGTTAAAATGTCAGCCCTGAGAGGTAGAGTGAGAGCCCAATGGACAAAAAGGTGCTGGTaGACTCCCATGTCAATAATT +
Preference number: 3 (lower is better)
Translates to: GSGSVKMSALRGRVRAQWTKRCW*TPMSII
Trigger: AATTATTGACATGGGAGTCAACCAGCACCTTTTTGT...CCATTGGGCTCTCACTCTACCTCTCAGGGCTGACATTTTAACTGACCCGCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR-3UTR CAA 90 bp TGTTGGTCTCGTCAAAGGACTCCCCATGGAACTCTGGGTGCCATTGCCAGTGTTATGACTTTGGCACTATaGGGGACAAGATTAAAAAGC +
Preference number: 3 (lower is better)
Translates to: CWSRQRTPHGTLGAIASVMTLAL*GTRLKS
Trigger: GCTTTTTAATCTTGTCCCCAATAGTGCCAAAGTCAT...AACACTGGCAATGGCACCCAGAGTTCCATGGGGAGTCCTTTGACGAGACCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp CATGGAACTCTGGGTGCCATTGCCAGTGTTCCGGAGGTGATTGTGAAGAAGTTTTGGTCCCAGTCATGTTaGTCATCTGACAAAATTTCC +
Preference number: 3 (lower is better)
Translates to: HGTLGAIASVPEVIVKKFWSQSC*SSDKIS
Trigger: GGAAATTTTGTCAGATGACAAACATGACTGGGACCA...AAACTTCTTCACAATCACCTCCGGAACACTGGCAATGGCACCCAGAGTTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp AGGAAATTGGTCGGCGTCATCATCAAACATGGCTTCCTTGAGGGCAGACTTGTTGATGGCTCAAGGGAGTaGTACAATGTTTCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: RKLVGVIIKHGFLEGRLVDGSRE*YNVSAS
Trigger: TGAAGCTGAAACATTGTACAACTCCCTTGAGCCATC...AACAAGTCTGCCCTCAAGGAAGCCATGTTTGATGATGACGCCGACCAATTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp TGCACGCTTGATGTAAAGGTTCAGCAGCTTCATTTTACTACCAGTGAGTTGACTGAGCTAGCACATCTGTaGAGGACTTCTGCCACGTCT +
Preference number: 3 (lower is better)
Translates to: CTLDVKVQQLHFTTSELTELAHL*RTSATS
Trigger: AGACGTGGCAGAAGTCCTCAACAGATGTGCTAGCTC...AGTCAACTCACTGGTAGTAAAATGAAGCTGCTGAACCTTTACATCAAGCGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR TCA 72 bp TCTTACAGAACTGGCTGGTTCCATGACATTTCTCATTaGGGTCATCCCAAAGGAGTTGCTGCTGATGACGAG +
Preference number: 3 (lower is better)
Translates to: SYRTGWFHDISH*GHPKGVAADDE
Trigger: CTCGTCATCAGCAGCAACTCCTTTGGGATGACCTCAATGAGAAATGTCATGGAACCAGCCAGTTCTGTAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
3UTR TCA 72 bp TTCAGCGCCGTGATCAAATTTGTTTCCCAAGACTGTTaGAAGGTGAGCAACAGTGATGCAAGCTTCCCTGAC +
Preference number: 3 (lower is better)
Translates to: FSAVIKFVSQDC*KVSNSDASFPD
Trigger: GTCAGGGAAGCTTGCATCACTGTTGCTCACCTTTCAACAGTCTTGGGAAACAAATTTGATCACGGCGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR TCA 72 bp CTTGAGGGCAGACTTGTTGAAAGGACTGATGCTATCTaGGTAGTTATATGGGTTATAGTCACGGGAGCGTGG +
Preference number: 3 (lower is better)
Translates to: LEGRLVERTDAI*VVIWVIVTGAW
Trigger: CCACGCTCCCGTGACTATAACCCATATAACTACTCAGATAGCATCAGTCCTTTCAACAAGTCTGCCCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 72 bp AGACTTTCTTGTGAGCTGGATGAGGACCTGTCTGACTaGGGAAGAGAAGCTACACTTCCAGAACTCTTTAAG +
Preference number: 3 (lower is better)
Translates to: RLSCELDEDLSD*GREATLPELFK
Trigger: CTTAAAGAGTTCTGGAAGTGTAGCTTCTCTTCCGCAGTCAGACAGGTCCTCATCCAGCTCACAAGAAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR GCA 72 bp TCTAGGTACATGGGTATGCCGAATAATAAATCTGATTaGTGCACATCCAGAGGTCGCCATGACTTTGGCACT +
Preference number: 3 (lower is better)
Translates to: SRYMGMPNNKSD*CTSRGRHDFGT
Trigger: AGTGCCAAAGTCATGGCGACCTCTGGATGTGCAGCAATCAGATTTATTATTCGGCATACCCATGTACCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 72 bp AGGTCAGAATGGTCTAAGGAAAGATCATCAGGAAATTaGTCGGCGTCATCATCAAACATGGCTTCCTTGAGG +
Preference number: 3 (lower is better)
Translates to: RSEWSKERSSGN*SASSSNMASLR
Trigger: CCTCAAGGAAGCCATGTTTGATGATGACGCCGACCAATTTCCTGATGATCTTTCCTTAGACCATTCTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp GTAAAATCTCTTGGGTCCATCTGCTTTGCCAGAGTTTCTATGTACTTAAGGATAGAGGTCGCCATGACTTaGGCACTATTGGGGACAAGA +
Preference number: 3 (lower is better)
Translates to: VKSLGSICFARVSMYLRIEVAMT*ALLGTR
Trigger: TCTTGTCCCCAATAGTGCCAAAGTCATGGCGACCTC...TATCCTTAAGTACATAGAAACTCTGGCAAAGCAGATGGACCCAAGAGATTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp CAGAATTCATGTTCTCTGTATCGTAATCAAATGCACTTGGAGATAACGTATTCTGGAAGGGGGTTGGCTTaGCTGCCTCCCACAGATACT +
Preference number: 3 (lower is better)
Translates to: QNSCSLYRNQMHLEITYSGRGLA*LPPTDT
Trigger: AGTATCTGTGGGAGGCAGCAAAGCCAACCCCCTTCC...AGAATACGTTATCTCCAAGTGCATTTGATTACGATACAGAGAACATGAATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR TCA 72 bp TCCCATTGTAATAATTCTCATGGAAACCTAGGCAGGTaGTCTGGTGCAGCTTTCTTACGGGGTAAAAGAAGG +
Preference number: 3 (lower is better)
Translates to: SHCNNSHGNLGR*SGAAFLRGKRR
Trigger: CCTTCTTTTACCCCGTAAGAAAGCTGCACCAGATCACCTGCCTAGGTTTCCATGAGAATTATTACAATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR GCA 72 bp AGGTACATGGGTATGCCGAATAATAAATCTGATTGCTaGACATCCAGAGGTCGCCATGACTTTGGCACTATT +
Preference number: 3 (lower is better)
Translates to: RYMGMPNNKSDC*TSRGRHDFGTI
Trigger: AATAGTGCCAAAGTCATGGCGACCTCTGGATGTGCAGCAATCAGATTTATTATTCGGCATACCCATGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR-3UTR CAA 90 bp GAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCTTTACACCACGTAGCCCTGCTTaGTCTCACATTATTGTCAGT +
Preference number: 3 (lower is better)
Translates to: EKAYDQSSIQFSRLTFFTPRSPA*SHIIVS
Trigger: ACTGACAATAATGTGAGACAAAGCAGGGCTACGTGG...TGTAAAGAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR TCA 72 bp AGAGTCTCCAAGAACATGCTGAACACTCTCTTGCCATaGGGATCTGCAAACATTCTTGTGAAAATTTCACAT +
Preference number: 3 (lower is better)
Translates to: RVSKNMLNTLLP*GSANILVKISH
Trigger: ATGTGAAATTTTCACAAGAATGTTTGCAGATCCTCATGGCAAGAGAGTGTTCAGCATGTTCTTGGAGACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CCA 72 bp TTAAGGATAGCCACCTTTACCTTCAAGCTTGGCGTTTaGGTCTGGTCAACTGTAAATCTCATTAGGATATTA +
Preference number: 3 (lower is better)
Translates to: LRIATFTFKLGV*VWSTVNLIRIL
Trigger: TAATATCCTAATGAGATTTACAGTTGACCAGACCCAAACGCCAAGCTTGAAGGTAAAGGTGGCTATCCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR TCA 72 bp CACCAAATTTGGCCTTTCACCCAAACTGGTAATATTTaGAAGTTGGCTGCACACGAAAATAACTTTAGCAGA +
Preference number: 3 (lower is better)
Translates to: HQIWPFTQTGNI*KLAAHENNFSR
Trigger: TCTGCTAAAGTTATTTTCGTGTGCAGCCAACTTTCAAATATTACCAGTTTGGGTGAAAGGCCAAATTTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR CCA 72 bp TTGAAGTGTTCATCCCAAACACTGAAAGATTCTTCCTaGGTTAGCTTCATGAGTTCATACAGGGCAATTTTT +
Preference number: 3 (lower is better)
Translates to: LKCSSQTLKDSS*VSFMSSYRAIF
Trigger: AAAAATTGCCCTGTATGAACTCATGAAGCTAACCCAGGAAGAATCTTTCAGTGTTTGGGATGAACACTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR TCA 72 bp ATGTATGTACACACCAATCAGCATTCAGTAAATATCTaGGCAGTCAATACACGCTTAACATGTATATTCGCT +
Preference number: 3 (lower is better)
Translates to: MYVHTNQHSVNI*AVNTRLTCIFA
Trigger: AGCGAATATACATGTTAAGCGTGTATTGACTGCTCAGATATTTACTGAATGCTGATTGGTGTGTACATACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGCTGCTCCGGGCCACTaGGAGCCGAGATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAAAPGH*EPRWAG
Trigger: GCCAGCCCATCTCGGCTCTCAGTGGCCCGGAGCAGC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTGCTCCGGGCCACTaGGAGCCGAGATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAAAPGH*EPRWAG
Trigger: GCCAGCCCATCTCGGCTCTCAGTGGCCCGGAGCAGC...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCTGGAGGCCAGCGGCTaGAAGGAGCGCACCGGACTC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLEASG*KERTGL
Trigger: GAGTCCGGTGCGCTCCTTCCAGCCGCTGGCCTCCAG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS-3UTR TCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCTGCTCCGGGCCACTaGGAGCCGAGATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSAAPGH*EPRWAG
Trigger: GCCAGCCCATCTCGGCTCTCAGTGGCCCGGAGCAGC...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGGACTCGCATGGCACTaGCAGAGGACGACAACCGGC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSGLAWH*QRTTTG
Trigger: GCCGGTTGTCGTCCTCTGTCAGTGCCATGCGAGTCC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGGCTGGCCTCTCTGCTaGAGCCCTGGCTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAGWPLC*SPGSLG
Trigger: TCCCAAGGAGCCAGGGCTGCAGCAGAGAGGCCAGCC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCTGCTCCGGGCCACTaGGAGCCGAGATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGAAPGH*EPRWAG
Trigger: GCCAGCCCATCTCGGCTCTCAGTGGCCCGGAGCAGC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCCCGGCTACAGCCTTaGCTCACACTCGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASRLQP*LTLGRG
Trigger: TCCTCGGCCGAGTGTGAGTCAAGGCTGTAGCCGGGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGGACCAGTTGGCTGGTaGCCGAGGTGTTGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSGPVGW*PRCWSR
Trigger: ACGAGACCAACACCTCGGTCACCAGCCAACTGGTCC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGACTCGTGTCCCTGCTaGTCTCTCTGCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSDSCPC*SLCWLP
Trigger: GGGAAGCCAGCAGAGAGAGCAGCAGGGACACGAGTC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACCAGAGCTGGCTGGCTaGCGTCAGCAGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAPELAG*RQQHHL
Trigger: GAGGTGATGCTGCTGACGGCAGCCAGCCAGCTCTGG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCCGCTCACGTCCTTCTaGAGCACTTGGGCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSPLTSF*STWAQK
Trigger: CTTCTGCGCCCAAGTGCTGCAGAAGGACGTGAGCGG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR GCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAACGATACCCGGTAGTTaGTCGAGCCCACCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSATIPGS*SSPPSG
Trigger: CCCGCTGGGTGGGCTCGAGCAACTACCGGGTATCGT...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR CCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCAGAAACATCAGCAGTaGGGTCCGCGCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSQKHQQ*GPRLQS
Trigger: GCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCTGCCAGGCTGGGACTaGGACACCATTTTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLPGWD*DTIFVR
Trigger: CCGGACAAAAATGGTGTCTCAGTCCCAGCCTGGCAG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
CDS-3UTR TCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTCCCGGCTACAGCCTTaGCTCACACTCGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSSRLQP*LTLGRG
Trigger: TCCTCGGCCGAGTGTGAGTCAAGGCTGTAGCCGGGA...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGGACCAGTTGGCTGGTaGCCGAGGTGTTGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAGPVGW*PRCWSR
Trigger: ACGAGACCAACACCTCGGTCACCAGCCAACTGGTCC...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTCACTTCGAGAACGCTaGAGGCTTCCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSSLRER*RLPGRG
Trigger: CCCCCTTCCAGGAAGCCTGCAGCGTTCTCGAAGTGA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGACTCGTGTCCCTGCTaGTCTCTCTGCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAADSCPC*SLCWLP
Trigger: GGGAAGCCAGCAGAGAGAGCAGCAGGGACACGAGTC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACCGGACTCGTGTCCCTaGTGCTCTCTCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAPDSCP*CSLCWL
Trigger: AAGCCAGCAGAGAGAGCAGCAGGGACACGAGTCCGG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCACCGGACTCGTGTCCCTaGTGCTCTCTCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAPDSCP*CSLCWL
Trigger: AAGCCAGCAGAGAGAGCAGCAGGGACACGAGTCCGG...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCCAGAGCTGGCTGGCTaGCGTCAGCAGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSPELAG*RQQHHL
Trigger: GAGGTGATGCTGCTGACGGCAGCCAGCCAGCTCTGG...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTTCCTGGAAGGGGGTTaGCTTTGCTGCCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSFLEGG*LCCLPQ
Trigger: CTGTGGGAGGCAGCAAAGCCAACCCCCTTCCAGGAA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACCAGTGGATCTGGAATaGTGTCTGGAGGCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAPVDLE*CLEASG
Trigger: GCCGCTGGCCTCCAGACACCATTCCAGATCCACTGG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS-3UTR CCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGGGCACCAGTGGATCTaGAATGGTGTCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSGHQWI*NGVWRP
Trigger: TGGCCTCCAGACACCATTCCAGATCCACTGGTGCCC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACTGCCAGGCTGGGACTaGGACACCATTTTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALPGWD*DTIFVR
Trigger: CCGGACAAAAATGGTGTCTCAGTCCCAGCCTGGCAG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
CDS-3UTR TCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGGACCAGTTGGCTGGTaGCCGAGGTGTTGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSGPVGW*PRCWSR
Trigger: ACGAGACCAACACCTCGGTCACCAGCCAACTGGTCC...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGACCAGTTGGCTGGTaGCCGAGGTGTTGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVGPVGW*PRCWSR
Trigger: ACGAGACCAACACCTCGGTCACCAGCCAACTGGTCC...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGGGGGTTGGCTTTGCTaGCTCCCACAGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSGGWLC*LPQILF
Trigger: GAAGAGTATCTGTGGGAGGCAGCAAAGCCAACCCCC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCACTTCGAGAACGCTaGAGGCTTCCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASLRER*RLPGRG
Trigger: CCCCCTTCCAGGAAGCCTGCAGCGTTCTCGAAGTGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCCGGACTCGTGTCCCTaGTGCTCTCTCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSPDSCP*CSLCWL
Trigger: AAGCCAGCAGAGAGAGCAGCAGGGACACGAGTCCGG...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCCATGGAACTCTGGGTaGCATTGCCAGTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSPWNSG*HCQCSG
Trigger: TCCGGAACACTGGCAATGGCACCCAGAGTTCCATGG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATTCCTGGAAGGGGGTTaGCTTTGCTGCCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAFLEGG*LCCLPQ
Trigger: CTGTGGGAGGCAGCAAAGCCAACCCCCTTCCAGGAA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAACGCTGCAGGCTTCCTaGAAGGGGGTTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAATLQAS*KGVGFA
Trigger: AGCAAAGCCAACCCCCTTCCAGGAAGCCTGCAGCGT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAACGCTGCAGGCTTCCTaGAAGGGGGTTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSATLQAS*KGVGFA
Trigger: AGCAAAGCCAACCCCCTTCCAGGAAGCCTGCAGCGT...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCAGCATGATGAGCCTTaGCACCAGCTGCCGCATTCA +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSQHDEP*HQLPHS
Trigger: TGAATGCGGCAGCTGGTGCCAAGGCTCATCATGCTG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGAGGACTGGACCAGTTaGCTGGTGACCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAEDWTS*LVTEVL
Trigger: CAACACCTCGGTCACCAGCCAACTGGTCCAGTCCTC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGAGGACTGGACCAGTTaGCTGGTGACCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAEDWTS*LVTEVL
Trigger: CAACACCTCGGTCACCAGCCAACTGGTCCAGTCCTC...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCCAGAAACATCAGCAGTaGGGTCCGCGCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVQKHQQ*GPRLQS
Trigger: GCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTG...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAATCTGGAATGGTGTCTaGAGGCCAGCGGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAIWNGV*RPAAGR
Trigger: CCTTCCAGCCGCTGGCCTCCAGACACCATTCCAGAT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS-3UTR CCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACCCTCCAGGTCCGGGATaGCTCCGGGCGTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDPPGPG*LRACRG
Trigger: GCCTCGGCACGCCCGGAGCCATCCCGGACCTGGAGG...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTCTGAGGTCCTTAGCTaGCAGCTTAAGCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSSEVLS*QLKRSI
Trigger: GATGGAGCGCTTAAGCTGTCAGCTAAGGACCTCAGA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTTGACCAGGACTCGTTaGGCACCAGAGCTCACAGTA +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLTRTR*APELTV
Trigger: TACTGTGAGCTCTGGTGCTCAACGAGTCCTGGTCAA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGTGCTGAAGCTGAATTaGCCAGGACTCGTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSVLKLN*PGLVEH
Trigger: GTGCTCAACGAGTCCTGGTCAATTCAGCTTCAGCAC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGGACTCGCATGGCACTaGCAGAGGACGACAACCGGC +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGGLAWH*QRTTTG
Trigger: GCCGGTTGTCGTCCTCTGTCAGTGCCATGCGAGTCC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGCTATAGGAGCGTTCTaGACACGCACTAGAGGCATC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSAIGAF*TRTRGI
Trigger: GATGCCTCTAGTGCGTGTTCAGAACGCTCCTATAGC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCATGTATGTCTTCCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSHVCLP*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGGAAGACATACATG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGGGGGTTGGCTTTGCTaGCTCCCACAGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAGGWLC*LPQILF
Trigger: GAAGAGTATCTGTGGGAGGCAGCAAAGCCAACCCCC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGCCTTGGCACCAGCTaGCGCATTCACATCAATGTC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSSLGTS*RIHINV
Trigger: GACATTGATGTGAATGCGGCAGCTGGTGCCAAGGCT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCACCATGGAACTCTGGGTaGCATTGCCAGTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAPWNSG*HCQCSG
Trigger: TCCGGAACACTGGCAATGGCACCCAGAGTTCCATGG...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGCTTCCCTGACCACCTaGGATCTGAGGTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAASLTT*DLRSLA
Trigger: AGCTAAGGACCTCAGATCCCAGGTGGTCAGGGAAGC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACAGCATGATGAGCCTTaGCACCAGCTGCCGCATTCA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAQHDEP*HQLPHS
Trigger: TGAATGCGGCAGCTGGTGCCAAGGCTCATCATGCTG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACTCCCCATGGAACTCTaGGTGCCATTGCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALPMEL*VPLPVF
Trigger: GAACACTGGCAATGGCACCCAGAGTTCCATGGGGAG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCACTCCCCATGGAACTCTaGGTGCCATTGCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSALPMEL*VPLPVF
Trigger: GAACACTGGCAATGGCACCCAGAGTTCCATGGGGAG...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGAGGACTGGACCAGTTaGCTGGTGACCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSEDWTS*LVTEVL
Trigger: CAACACCTCGGTCACCAGCCAACTGGTCCAGTCCTC...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATTATCCAGAGCTGGCTaGCTGCCGTCAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSALSRAG*LPSAAS
Trigger: TGATGCTGCTGACGGCAGCCAGCCAGCTCTGGATAA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATTATCCAGAGCTGGCTaGCTGCCGTCAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALSRAG*LPSAAS
Trigger: TGATGCTGCTGACGGCAGCCAGCCAGCTCTGGATAA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTTTATTATCCAGAGCTaGCTGGCTGCCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSFIIQS*LAAVSS
Trigger: GCTGCTGACGGCAGCCAGCCAGCTCTGGATAATAAA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAATAGTCACGGGAGCGTaGAGAGGAGTGGAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAIVTGA*RGVEWH
Trigger: ATGCCACTCCACTCCTCTCCACGCTCCCGTGACTAT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAATAGTCACGGGAGCGTaGAGAGGAGTGGAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAIVTGA*RGVEWH
Trigger: ATGCCACTCCACTCCTCTCCACGCTCCCGTGACTAT...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCTGAGGTCCTTAGCTaGCAGCTTAAGCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASEVLS*QLKRSI
Trigger: GATGGAGCGCTTAAGCTGTCAGCTAAGGACCTCAGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAATCCAGAGGTCGCCATaGCTTTGGCACTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAIQRSP*LWHYWG
Trigger: TCCCCAATAGTGCCAAAGTCATGGCGACCTCTGGAT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAAGCCTTGGCACCAGCTaGCGCATTCACATCAATGTC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASLGTS*RIHINV
Trigger: GACATTGATGTGAATGCGGCAGCTGGTGCCAAGGCT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGGCTCCTTGGGATCTTaGTTCTCTTCTGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSGSLGS*FSSVLK
Trigger: CTTCAGCACAGAAGAGAAGCAAGATCCCAAGGAGCC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGACTCGTGTCCCTGCTaGTCTCTCTGCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGDSCPC*SLCWLP
Trigger: GGGAAGCCAGCAGAGAGAGCAGCAGGGACACGAGTC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGAAATCAGCACTGACTaGGCTGCCTTCCGAACATCA +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSEISTD*AAFRTS
Trigger: TGATGTTCGGAAGGCAGCGCAGTCAGTGCTGATTTC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTTCATCACCAATCACTaGATGGACAGCCACCAGGCA +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSFITNH*MDSHQA
Trigger: TGCCTGGTGGCTGTCCATGCAGTGATTGGTGATGAA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAAGCGCATTGGCACGCTaGTCCCAGTCATGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASALAR*SQSCLS
Trigger: TGACAAACATGACTGGGACCAGCGTGCCAATGCGCT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCTTCCCTGACCACCTaGGATCTGAGGTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSASLTT*DLRSLA
Trigger: AGCTAAGGACCTCAGATCCCAGGTGGTCAGGGAAGC...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCAAAGGACTCCCCATaGAACTCTGGGTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASKDSP*NSGCHC
Trigger: GCAATGGCACCCAGAGTTCCATGGGGAGTCCTTTGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTTATCCAGAGCTGGCTaGCTGCCGTCAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSLSRAG*LPSAAS
Trigger: TGATGCTGCTGACGGCAGCCAGCCAGCTCTGGATAA...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATTTATTATCCAGAGCTaGCTGGCTGCCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAFIIQS*LAAVSS
Trigger: GCTGCTGACGGCAGCCAGCCAGCTCTGGATAATAAA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATTTATTATCCAGAGCTaGCTGGCTGCCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAFIIQS*LAAVSS
Trigger: GCTGCTGACGGCAGCCAGCCAGCTCTGGATAATAAA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCATAGTCACGGGAGCGTaGAGAGGAGTGGAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVIVTGA*RGVEWH
Trigger: ATGCCACTCCACTCCTCTCCACGCTCCCGTGACTAT...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCACCAATCACTGCATaGACAGCCACCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASPITA*TATRQK
Trigger: CTTCTGCCTGGTGGCTGTCCATGCAGTGATTGGTGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCCAGAAACATCAGCAGTaGGGTCCGCGCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGQKHQQ*GPRLQS
Trigger: GCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTG...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGCTTTCTTGCACTGCTaGCAGGATTCCCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAAFLHC*QDSQVF
Trigger: AAACACCTGGGAATCCTGTCAGCAGTGCAAGAAAGC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCATCCAGAGGTCGCCATaGCTTTGGCACTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVIQRSP*LWHYWG
Trigger: TCCCCAATAGTGCCAAAGTCATGGCGACCTCTGGAT...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTGTCTTTCCAGTGAATaGGTCTGCCATTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSCLSSE*VCHSCS
Trigger: GCTGCAAGAATGGCAGACTCATTCACTGGAAAGACA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTGCTGAAGCTGAATTaGCCAGGACTCGTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVVLKLN*PGLVEH
Trigger: GTGCTCAACGAGTCCTGGTCAATTCAGCTTCAGCAC...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGTGCTGAAGCTGAATTaGCCAGGACTCGTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSVLKLN*PGLVEH
Trigger: GTGCTCAACGAGTCCTGGTCAATTCAGCTTCAGCAC...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCTATAGGAGCGTTCTaGACACGCACTAGAGGCATC +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVAIGAF*TRTRGI
Trigger: GATGCCTCTAGTGCGTGTTCAGAACGCTCCTATAGC...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTCTCCAAGAACATGCTaGACACCTTGCCATGAGGAT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSSPRTC*TPCHED
Trigger: ATCCTCATGGCAAGGTGTTCAGCATGTTCTTGGAGA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCTCACCACCTCTTTGTaGGGATCTTTATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLTTSL*GSLCAS
Trigger: GGAAGCACATAAAGATCCTCACAAAGAGGTGGTGAG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGAGGACCTGTCTGACTaGGGAAGAGAAGCTACACTT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAEDLSD*GREATL
Trigger: AAGTGTAGCTTCTCTTCCGCAGTCAGACAGGTCCTC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGGCTCCTTGGGATCTTaGTTCTCTTCTGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAGSLGS*FSSVLK
Trigger: CTTCAGCACAGAAGAGAAGCAAGATCCCAAGGAGCC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACGGCTGGCCTCTCTGCTaGAGCCCTGGCTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDGWPLC*SPGSLG
Trigger: TCCCAAGGAGCCAGGGCTGCAGCAGAGAGGCCAGCC...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTCTGTTGAGGACTTCTaGCACGTCTTCTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSSVEDF*HVFCLS
Trigger: AGACAGACAGAAGACGTGGCAGAAGTCCTCAACAGA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGAAATCAGCACTGACTaGGCTGCCTTCCGAACATCA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAEISTD*AAFRTS
Trigger: TGATGTTCGGAAGGCAGCGCAGTCAGTGCTGATTTC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATTCATCACCAATCACTaGATGGACAGCCACCAGGCA +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAFITNH*MDSHQA
Trigger: TGCCTGGTGGCTGTCCATGCAGTGATTGGTGATGAA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATTCATCACCAATCACTaGATGGACAGCCACCAGGCA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAFITNH*MDSHQA
Trigger: TGCCTGGTGGCTGTCCATGCAGTGATTGGTGATGAA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGAGCGCATTGGCACGCTaGTCCCAGTCATGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSSALAR*SQSCLS
Trigger: TGACAAACATGACTGGGACCAGCGTGCCAATGCGCT...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCAGCGCATTGGCACGCTaGTCCCAGTCATGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVSALAR*SQSCLS
Trigger: TGACAAACATGACTGGGACCAGCGTGCCAATGCGCT...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGACTTTCTTGTGAGCTaGATGAGGACCTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSDFLVS*MRTCLT
Trigger: AGTCAGACAGGTCCTCATCCAGCTCACAAGAAAGTC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCTCAAAGGACTCCCCATaGAACTCTGGGTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVSKDSP*NSGCHC
Trigger: GCAATGGCACCCAGAGTTCCATGGGGAGTCCTTTGA...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCTCACCAATCACTGCATaGACAGCCACCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVSPITA*TATRQK
Trigger: CTTCTGCCTGGTGGCTGTCCATGCAGTGATTGGTGA...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCTTTCTTGCACTGCTaGCAGGATTCCCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVAFLHC*QDSQVF
Trigger: AAACACCTGGGAATCCTGTCAGCAGTGCAAGAAAGC...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTCCAGCAACAAGCAGTaGTCTGATTTTCTTAAGCGC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSSSNKQ*SDFLKR
Trigger: GCGCTTAAGAAAATCAGATCACTGCTTGTTGCTGGA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAAGACTGTTGAAAGGTaGGCAACAGTGATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSKTVER*ATVMQA
Trigger: AGCTTGCATCACTGTTGCTCACCTTTCAACAGTCTT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATGTCTTTCCAGTGAATaGGTCTGCCATTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAACLSSE*VCHSCS
Trigger: GCTGCAAGAATGGCAGACTCATTCACTGGAAAGACA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTCCCGGCTACAGCCTTaGCTCACACTCGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDSRLQP*LTLGRG
Trigger: TCCTCGGCCGAGTGTGAGTCAAGGCTGTAGCCGGGA...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp GGAAGCGGGTCAGTTAAAATGTCAGCCCTGAGAGGTAGAGTGAGAGCCCAATGGGGACTCGCATGGCACTaGCAGAGGACGACAACCGGC +
Preference number: 4 (lower is better)
Translates to: GSGSVKMSALRGRVRAQWGLAWH*QRTTTG
Trigger: GCCGGTTGTCGTCCTCTGTCAGTGCCATGCGAGTCC...CCATTGGGCTCTCACTCTACCTCTCAGGGCTGACATTTTAACTGACCCGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR TCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACGGACTCGCATGGCACTaGCAGAGGACGACAACCGGC +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDGLAWH*QRTTTG
Trigger: GCCGGTTGTCGTCCTCTGTCAGTGCCATGCGAGTCC...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCTGAACACCTTGCCATaGGGATCTGCAAACATTCTT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLNTLP*GSANIL
Trigger: AAGAATGTTTGCAGATCCTCATGGCAAGGTGTTCAG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCCTGGGTTAGCTTCATaGGTTCATACAGGGCAATTT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSPGLAS*VHTGQF
Trigger: AAATTGCCCTGTATGAACTCATGAAGCTAACCCAGG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCACCGACCATCATCAGATaGTGTTCCATCCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAPTIIR*CSIHLV
Trigger: GACAAGATGGATGGAACAGCATCTGATGATGGTCGG...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACCGACCATCATCAGATaGTGTTCCATCCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAPTIIR*CSIHLV
Trigger: GACAAGATGGATGGAACAGCATCTGATGATGGTCGG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCTGTTGAGGACTTCTaGCACGTCTTCTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASVEDF*HVFCLS
Trigger: AGACAGACAGAAGACGTGGCAGAAGTCCTCAACAGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATCTGTTGAGGACTTCTaGCACGTCTTCTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSASVEDF*HVFCLS
Trigger: AGACAGACAGAAGACGTGGCAGAAGTCCTCAACAGA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGCTGAAATTCTGGATTaGCTCAGTGACGCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAAEILD*LSDASK
Trigger: CTTAGAGGCGTCACTGAGGCAATCCAGAATTTCAGC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGCTTCACCAGGAAAGTaGTTCCTAAGGCCCATGTAT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAASPGK*FLRPMY
Trigger: ATACATGGGCCTTAGGAACCACTTTCCTGGTGAAGC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGACTTTCTTGTGAGCTaGATGAGGACCTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSADFLVS*MRTCLT
Trigger: AGTCAGACAGGTCCTCATCCAGCTCACAAGAAAGTC...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGACTTTCTTGTGAGCTaGATGAGGACCTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAADFLVS*MRTCLT
Trigger: AGTCAGACAGGTCCTCATCCAGCTCACAAGAAAGTC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACTGAAGCTGAAATTCTaGATTGCCTCAGTGACGCCT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALKLKF*IASVTP
Trigger: AGGCGTCACTGAGGCAATCCAGAATTTCAGCTTCAG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCCTATTTCCATCCACTaGTTCCTCATCATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSPISIH*FLIIKA
Trigger: AGCTTTGATGATGAGGAATCAGTGGATGGAAATAGG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCCAGCAACAAGCAGTaGTCTGATTTTCTTAAGCGC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASSNKQ*SDFLKR
Trigger: GCGCTTAAGAAAATCAGATCACTGCTTGTTGCTGGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAAAGACTGTTGAAAGGTaGGCAACAGTGATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAKTVER*ATVMQA
Trigger: AGCTTGCATCACTGTTGCTCACCTTTCAACAGTCTT...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGTTTCCCAAGACTGTTaGAAGGTGAGCAACAGTGAT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAVSQDC*KVSNSD
Trigger: ATCACTGTTGCTCACCTTTCAACAGTCTTGGGAAAC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTCAGCATCAGCATCATaGATGCCCTTCTTAATCGTT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSSASAS*MPFLIV
Trigger: AACGATTAAGAAGGGCATTCATGATGCTGATGCTGA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TCAGCCCTGAGAGGTAGAGTGAGAGCCCAATGGACAGAAGCCTCTTGCAGCATCCTGCCAGGCTGGGACTaGGACACCATTTTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: SALRGRVRAQWTEASCSILPGWD*DTIFVR
Trigger: CCGGACAAAAATGGTGTCTCAGTCCCAGCCTGGCAG...GATGCTGCAAGAGGCTTCTGTCCATTGGGCTCTCACTCTACCTCTCAGGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR TCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCTTGACCAGGACTCGTTaGGCACCAGAGCTCACAGTA +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGLTRTR*APELTV
Trigger: TACTGTGAGCTCTGGTGCTCAACGAGTCCTGGTCAA...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGTGCTGAAGCTGAATTaGCCAGGACTCGTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGVLKLN*PGLVEH
Trigger: GTGCTCAACGAGTCCTGGTCAATTCAGCTTCAGCAC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCTATAGGAGCGTTCTaGACACGCACTAGAGGCATC +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGAIGAF*TRTRGI
Trigger: GATGCCTCTAGTGCGTGTTCAGAACGCTCCTATAGC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTCTCCAAGAACATGCTaGACACCTTGCCATGAGGAT +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSSPRTC*TPCHED
Trigger: ATCCTCATGGCAAGGTGTTCAGCATGTTCTTGGAGA...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGGAGATAACGTATTCTaGGACGTGTTGGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAGDNVF*DVLVGE
Trigger: TTCTCCTACCAACACGTCTCAGAATACGTTATCTCC...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGGAGATAACGTATTCTaGGACGTGTTGGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAGDNVF*DVLVGE
Trigger: TTCTCCTACCAACACGTCTCAGAATACGTTATCTCC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGTTCATCCCAAACACTaGAAGATTCTTCCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSVHPKH*KILPGL
Trigger: TAACCCAGGAAGAATCTTTCAGTGTTTGGGATGAAC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCTCACCACCTCTTTGTaGGGATCTTTATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSLTTSL*GSLCAS
Trigger: GGAAGCACATAAAGATCCTCACAAAGAGGTGGTGAG...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCCTCACCACCTCTTTGTaGGGATCTTTATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVLTTSL*GSLCAS
Trigger: GGAAGCACATAAAGATCCTCACAAAGAGGTGGTGAG...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCCGGACACTGCTTTCTaGATTATCATAACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSPDTAF*IIITLY
Trigger: ATACAGGGTTATGATAATTCAGAAAGCAGTGTCCGG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGCACTTTGATGCACTaGTCTGGACTAATGGAAGTA +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSSTLMH*SGLMEV
Trigger: TACTTCCATTAGTCCAGAGCAGTGCATCAAAGTGCT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCCTGAAGCTGAAATTCTaGATTGCCTCAGTGACGCCT +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVLKLKF*IASVTP
Trigger: AGGCGTCACTGAGGCAATCCAGAATTTCAGCTTCAG...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCTGAAGCTGAAATTCTaGATTGCCTCAGTGACGCCT +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSLKLKF*IASVTP
Trigger: AGGCGTCACTGAGGCAATCCAGAATTTCAGCTTCAG...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCTTTATTATCCAGAGCTaGCTGGCTGCCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGFIIQS*LAAVSS
Trigger: GCTGCTGACGGCAGCCAGCCAGCTCTGGATAATAAA...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGATCATCAGGAAATTaGTCGGCGTCATCATCAAAC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSRSSGN*SASSSN
Trigger: GTTTGATGATGACGCCGACCAATTTCCTGATGATCT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTTTGATGCACTGCTCTaGACTAATGGAAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSFDALL*TNGSSQ
Trigger: TTGGCTACTTCCATTAGTCCAGAGCAGTGCATCAAA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
3UTR CAA 72 bp CGAGAACGCTGCAGGCTTCCTGGAAGGGGGTTGGCTTaGCTGCCTCCCACAGATACTCTTCCAGCTACAGTT +
Preference number: 4 (lower is better)
Translates to: RERCRLPGRGLA*LPPTDTLPATV
Trigger: AACTGTAGCTGGAAGAGTATCTGTGGGAGGCAGCAAAGCCAACCCCCTTCCAGGAAGCCTGCAGCGTTCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACCTATTTCCATCCACTaGTTCCTCATCATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAPISIH*FLIIKA
Trigger: AGCTTTGATGATGAGGAATCAGTGGATGGAAATAGG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCACCTATTTCCATCCACTaGTTCCTCATCATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAPISIH*FLIIKA
Trigger: AGCTTTGATGATGAGGAATCAGTGGATGGAAATAGG...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCTTTCTTGCACTGCTaGCAGGATTCCCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGAFLHC*QDSQVF
Trigger: AAACACCTGGGAATCCTGTCAGCAGTGCAAGAAAGC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCTCCAGCAACAAGCAGTaGTCTGATTTTCTTAAGCGC +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVSSNKQ*SDFLKR
Trigger: GCGCTTAAGAAAATCAGATCACTGCTTGTTGCTGGA...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGAAGACTGTTGAAAGGTaGGCAACAGTGATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSKTVER*ATVMQA
Trigger: AGCTTGCATCACTGTTGCTCACCTTTCAACAGTCTT...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTTTCCCAAGACTGTTaGAAGGTGAGCAACAGTGAT +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVVSQDC*KVSNSD
Trigger: ATCACTGTTGCTCACCTTTCAACAGTCTTGGGAAAC...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCAGCATCAGCATCATaGATGCCCTTCTTAATCGTT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASASAS*MPFLIV
Trigger: AACGATTAAGAAGGGCATTCATGATGCTGATGCTGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCCTGAACACCTTGCCATaGGGATCTGCAAACATTCTT +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVLNTLP*GSANIL
Trigger: AAGAATGTTTGCAGATCCTCATGGCAAGGTGTTCAG...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGGAGATAACGTATTCTaGGACGTGTTGGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSGDNVF*DVLVGE
Trigger: TTCTCCTACCAACACGTCTCAGAATACGTTATCTCC...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGTTCATCCCAAACACTaGAAGATTCTTCCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAVHPKH*KILPGL
Trigger: TAACCCAGGAAGAATCTTTCAGTGTTTGGGATGAAC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCTTCCAGTGTTTTCATaGCAGTTAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLPVFS*QLVLHS
Trigger: ACTATGCAGAACTAACTGTCATGAAAACACTGGAAG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACCGGACACTGCTTTCTaGATTATCATAACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAPDTAF*IIITLY
Trigger: ATACAGGGTTATGATAATTCAGAAAGCAGTGTCCGG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCACCGGACACTGCTTTCTaGATTATCATAACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAPDTAF*IIITLY
Trigger: ATACAGGGTTATGATAATTCAGAAAGCAGTGTCCGG...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAATAATAAATCTGATTaGTGCACATCCAGAGGTCGC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSNNKSD*CTSRGR
Trigger: GCGACCTCTGGATGTGCAGCAATCAGATTTATTATT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGAGGACCTGTCTGACTaGGGAAGAGAAGCTACACTT +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGEDLSD*GREATL
Trigger: AAGTGTAGCTTCTCTTCCGCAGTCAGACAGGTCCTC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGGCTCCTTGGGATCTTaGTTCTCTTCTGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGGSLGS*FSSVLK
Trigger: CTTCAGCACAGAAGAGAAGCAAGATCCCAAGGAGCC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp ATCCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGCCGGACTCGTGTCCCTaGTGCTCTCTCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IHRVWLECHVALLCLTLLPDSCP*CSLCWL
Trigger: AAGCCAGCAGAGAGAGCAGCAGGGACACGAGTCCGG...CAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATGGGTCCATCTGCTTTaGCAGAGTTTCTATGTACTT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAWVHLL*QSFYVL
Trigger: AAGTACATAGAAACTCTGGCAAAGCAGATGGACCCA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATGGGTCCATCTGCTTTaGCAGAGTTTCTATGTACTT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAWVHLL*QSFYVL
Trigger: AAGTACATAGAAACTCTGGCAAAGCAGATGGACCCA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGAAATCAGCACTGACTaGGCTGCCTTCCGAACATCA +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGEISTD*AAFRTS
Trigger: TGATGTTCGGAAGGCAGCGCAGTCAGTGCTGATTTC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACACGCTGCAGGCTTCCTaGAAGGGGGTTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDTLQAS*KGVGFA
Trigger: AGCAAAGCCAACCCCCTTCCAGGAAGCCTGCAGCGT...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACTTGGCGTTTGGGTCTaGTCAACTGTAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALGVWV*STVNLI
Trigger: AATGAGATTTACAGTTGACCAGACCCAAACGCCAAG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCACTTGGCGTTTGGGTCTaGTCAACTGTAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSALGVWV*STVNLI
Trigger: AATGAGATTTACAGTTGACCAGACCCAAACGCCAAG...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATTCAAGCTTGGCGTTTaGGTCTGGTCAACTGTAAAT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAFKLGV*VWSTVN
Trigger: ATTTACAGTTGACCAGACCCAAACGCCAAGCTTGAA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATTCAAGCTTGGCGTTTaGGTCTGGTCAACTGTAAAT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAFKLGV*VWSTVN
Trigger: ATTTACAGTTGACCAGACCCAAACGCCAAGCTTGAA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAAGATCATCAGGAAATTaGTCGGCGTCATCATCAAAC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAARSSGN*SASSSN
Trigger: GTTTGATGATGACGCCGACCAATTTCCTGATGATCT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCTGAAAGATTCTTCCTaGGTTAGCTTCATGAGTTCA +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLKDSS*VSFMSS
Trigger: TGAACTCATGAAGCTAACCCAGGAAGAATCTTTCAG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATTTGATGCACTGCTCTaGACTAATGGAAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAFDALL*TNGSSQ
Trigger: TTGGCTACTTCCATTAGTCCAGAGCAGTGCATCAAA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTCCTTCTGCAGCACTTaGGCGCAGAAGTACTCGGCG +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDSFCST*AQKYSA
Trigger: CGCCGAGTACTTCTGCGCCCAAGTGCTGCAGAAGGA...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR CCA 90 bp CAGGAATATCTATTAGCCAGACTAGAGGCTTTCAGAGCACAGGCATCTTCAAATCCTCCAGGTCCGGGATaGCTCCGGGCGTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: QEYLLARLEAFRAQASSNPPGPG*LRACRG
Trigger: GCCTCGGCACGCCCGGAGCCATCCCGGACCTGGAGG...ATTTGAAGATGCCTGTGCTCTGAAAGCCTCTAGTCTGGCTAATAGATATTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
3UTR CAA 72 bp AGCACTGACTGCGCTGCCTTCCGAACATCAGAGCTTTaGGGCTCTGTCGTCCAAGTGATGACCCGAGACACT +
Preference number: 4 (lower is better)
Translates to: STDCAAFRTSEL*GSVVQVMTRDT
Trigger: AGTGTCTCGGGTCATCACTTGGACGACAGAGCCCAAAAGCTCTGATGTTCGGAAGGCAGCGCAGTCAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCCCTATTTCCATCCACTaGTTCCTCATCATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVPISIH*FLIIKA
Trigger: AGCTTTGATGATGAGGAATCAGTGGATGGAAATAGG...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTCAGCATCAGCATCATaGATGCCCTTCTTAATCGTT +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSSASAS*MPFLIV
Trigger: AACGATTAAGAAGGGCATTCATGATGCTGATGCTGA...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAAAGACTTTTCTGATATaGTGGCTCAAGGGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAKTFLI*WLKGVV
Trigger: TACAACTCCCTTGAGCCATCATATCAGAAAAGTCTT...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAAAGACTTTTCTGATATaGTGGCTCAAGGGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAKTFLI*WLKGVV
Trigger: TACAACTCCCTTGAGCCATCATATCAGAAAAGTCTT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACAAACAACCAATCTTaGAGATCATCTTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSTNNQS*RSSLWT
Trigger: AGTCCACAAAGATGATCTTCAAGATTGGTTGTTTGT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGGACTGATGCTATCTaGGTAGTTATATGGGTTATA +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSRTDAI*VVIWVI
Trigger: TATAACCCATATAACTACTCAGATAGCATCAGTCCT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTTCATCCCAAACACTaGAAGATTCTTCCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVVHPKH*KILPGL
Trigger: TAACCCAGGAAGAATCTTTCAGTGTTTGGGATGAAC...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCTCGAACTTTGTCTTTaGCATCTCCCATTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSLELCL*HLPFCL
Trigger: TAGACAGAATGGGAGATGTCAAAGACAAAGTTCGAG...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCCAACAAACGTAGGTaGTGGAAAAAGCAATCATAC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASNKRR*WKKQSY
Trigger: GTATGATTGCTTTTTCCAGCACCTACGTTTGTTGGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAAATAATAAATCTGATTaGTGCACATCCAGAGGTCGC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAANNKSD*CTSRGR
Trigger: GCGACCTCTGGATGTGCAGCAATCAGATTTATTATT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACGGGGGTTGGCTTTGCTaGCTCCCACAGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDGGWLC*LPQILF
Trigger: GAAGAGTATCTGTGGGAGGCAGCAAAGCCAACCCCC...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCCCGACCATCATCAGATaGTGTTCCATCCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGPTIIR*CSIHLV
Trigger: GACAAGATGGATGGAACAGCATCTGATGATGGTCGG...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGCATCATCATCTGAGTaGATTCCATATGATTCATAC +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSASSSE*IPYDSY
Trigger: GTATGAATCATATGGAATGCACTCAGATGATGATGC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTGGGTCCATCTGCTTTaGCAGAGTTTCTATGTACTT +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSWVHLL*QSFYVL
Trigger: AAGTACATAGAAACTCTGGCAAAGCAGATGGACCCA...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGAGCACTTTGATGCACTaGTCTGGACTAATGGAAGTA +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSSTLMH*SGLMEV
Trigger: TACTTCCATTAGTCCAGAGCAGTGCATCAAAGTGCT...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTCCCGGCCTTGGGGATACTGAGGCACTCACTGTCATCTGACAAAATTGGTATCCCGCTCACGTCCTTCTaGAGCACTTGGGCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FPALGILRHSLSSDKIGIPLTSF*STWAQK
Trigger: CTTCTGCGCCCAAGTGCTGCAGAAGGACGTGAGCGG...GATACCAATTTTGTCAGATGACAGTGAGTGCCTCAGTATCCCCAAGGCCGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR CCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAACAAACGTAGGTGCTaGAAAAAGCAATCATACTGT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSNKRRC*KKQSYC
Trigger: ACAGTATGATTGCTTTTTCCAGCACCTACGTTTGTT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCTTCACCAGGAAAGTaGTTCCTAAGGCCCATGTAT +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGASPGK*FLRPMY
Trigger: ATACATGGGCCTTAGGAACCACTTTCCTGGTGAAGC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp GGAAGCGGGTCAGTTAAAATGTCAGCCCTGAGAGGTAGAGTGAGAGCCCAATGGCAGCATGATGAGCCTTaGCACCAGCTGCCGCATTCA +
Preference number: 4 (lower is better)
Translates to: GSGSVKMSALRGRVRAQWQHDEP*HQLPHS
Trigger: TGAATGCGGCAGCTGGTGCCAAGGCTCATCATGCTG...CCATTGGGCTCTCACTCTACCTCTCAGGGCTGACATTTTAACTGACCCGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCTTGGCGTTTGGGTCTaGTCAACTGTAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSLGVWV*STVNLI
Trigger: AATGAGATTTACAGTTGACCAGACCCAAACGCCAAG...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTTAGTAGCACCATCCTaGAAAGTTTTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLVAPS*KVFGKA
Trigger: AGCTTTACCAAAAACTTTCCAGGATGGTGCTACTAA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
3UTR CAA 72 bp GACGTGTTGGTAGGAGAAGTAAGAGGACTGGACCAGTaGGCTGGTGACCGAGGTGTTGGTCTCGTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: DVLVGEVRGLDQ*AGDRGVGLVKG
Trigger: TCCTTTGACGAGACCAACACCTCGGTCACCAGCCAACTGGTCCAGTCCTCTTACTTCTCCTACCAACACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGTCATGTTTGTCATCTaGCAAAATTTCCCTGATCTT +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAVMFVI*QNFPDL
Trigger: AAGATCAGGGAAATTTTGTCAGATGACAAACATGAC...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGTCATGTTTGTCATCTaGCAAAATTTCCCTGATCTT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAVMFVI*QNFPDL
Trigger: AAGATCAGGGAAATTTTGTCAGATGACAAACATGAC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTCTGAGGTCCTTAGCTaGCAGCTTAAGCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDSEVLS*QLKRSI
Trigger: GATGGAGCGCTTAAGCTGTCAGCTAAGGACCTCAGA...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGGAGATAACGTATTCTaGGACGTGTTGGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGGDNVF*DVLVGE
Trigger: TTCTCCTACCAACACGTCTCAGAATACGTTATCTCC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCCCTGGGTTAGCTTCATaGGTTCATACAGGGCAATTT +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGPGLAS*VHTGQF
Trigger: AAATTGCCCTGTATGAACTCATGAAGCTAACCCAGG...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCTTCCAGTGTTTTCATaGCAGTTAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSLPVFS*QLVLHS
Trigger: ACTATGCAGAACTAACTGTCATGAAAACACTGGAAG...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGTATTAGCAGATTGTaGTCCTTCATTTTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVGISRL*SFIFVR
Trigger: CCTGACAAAAATGAAGGATCACAATCTGCTAATACC...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCTCCAACAAACGTAGGTaGTGGAAAAAGCAATCATAC +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVSNKRR*WKKQSY
Trigger: GTATGATTGCTTTTTCCAGCACCTACGTTTGTTGGA...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTCCAACAAACGTAGGTaGTGGAAAAAGCAATCATAC +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSSNKRR*WKKQSY
Trigger: GTATGATTGCTTTTTCCAGCACCTACGTTTGTTGGA...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCAATAATAAATCTGATTaGTGCACATCCAGAGGTCGC +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVNNKSD*CTSRGR
Trigger: GCGACCTCTGGATGTGCAGCAATCAGATTTATTATT...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACCATGTATGTCTTCCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDHVCLP*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGGAAGACATACATG...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCAGCCTTGGCACCAGCTaGCGCATTCACATCAATGTC +
Preference number: 4 (lower is better)
Translates to: PQSLAGVPRSPALSHIIVSLGTS*RIHINV
Trigger: GACATTGATGTGAATGCGGCAGCTGGTGCCAAGGCT...GACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp ACTGTTACAGTAGGGAGAGGGTGTGGAGTAATATCTCTTCTTGCTGCTAAAACGGGCTGGCCTCTCTGCTaGAGCCCTGGCTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: TVTVGRGCGVISLLAAKTGWPLC*SPGSLG
Trigger: TCCCAAGGAGCCAGGGCTGCAGCAGAGAGGCCAGCC...CGTTTTAGCAGCAAGAAGAGATATTACTCCACACCCTCTCCCTACTGTAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGCATCATCATCTGAGTaGATTCCATATGATTCATAC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAASSSE*IPYDSY
Trigger: GTATGAATCATATGGAATGCACTCAGATGATGATGC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCATCATCTGAGTaGATTCCATATGATTCATAC +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAASSSE*IPYDSY
Trigger: GTATGAATCATATGGAATGCACTCAGATGATGATGC...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSSITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAAAGCTTTCCGGACACTaGTTTCTGAATTATCATAAC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAKLSGH*FLNYHN
Trigger: GTTATGATAATTCAGAAAGCAGTGTCCGGAAAGCTT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATTCAACAACTGTAGGTaGTGGAAAAAGCAATCATAC +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAFNNCR*WKKQSY
Trigger: GTATGATTGCTTTTTCCAGCACCTACAGTTGTTGAA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR GCA 90 bp TTCCCGGCCTTGGGGATACTGAGGCACTCACTGTCATCTGACAAAATTGGTATCCACTGGCTACCAGGCTaGAGGACATGCACGCATTGG +
Preference number: 4 (lower is better)
Translates to: FPALGILRHSLSSDKIGIHWLPG*RTCTHW
Trigger: CCAATGCGTGCATGTCCTGCAGCCTGGTAGCCAGTG...GATACCAATTTTGTCAGATGACAGTGAGTGCCTCAGTATCCCCAAGGCCGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATTAGTAGCACCATCCTaGAAAGTTTTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALVAPS*KVFGKA
Trigger: AGCTTTACCAAAAACTTTCCAGGATGGTGCTACTAA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCACTCATATCTTCTTaGCTTCTGAAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASLISS*LLKLKF
Trigger: GAATTTCAGCTTCAGAAGCCAAGAAGATATGAGTGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATCACTCATATCTTCTTaGCTTCTGAAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSASLISS*LLKLKF
Trigger: GAATTTCAGCTTCAGAAGCCAAGAAGATATGAGTGA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCCTGAAAGATTCTTCCTaGGTTAGCTTCATGAGTTCA +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVLKDSS*VSFMSS
Trigger: TGAACTCATGAAGCTAACCCAGGAAGAATCTTTCAG...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCTGAAAGATTCTTCCTaGGTTAGCTTCATGAGTTCA +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSLKDSS*VSFMSS
Trigger: TGAACTCATGAAGCTAACCCAGGAAGAATCTTTCAG...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp GGAAGCGGGTCAGTTAAAATGTCAGCCCTGAGAGGTAGAGTGAGAGCCCAATGGTCACCAATCACTGCATaGACAGCCACCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GSGSVKMSALRGRVRAQWSPITA*TATRQK
Trigger: CTTCTGCCTGGTGGCTGTCCATGCAGTGATTGGTGA...CCATTGGGCTCTCACTCTACCTCTCAGGGCTGACATTTTAACTGACCCGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTCACCAATCACTGCATaGACAGCCACCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDSPITA*TATRQK
Trigger: CTTCTGCCTGGTGGCTGTCCATGCAGTGATTGGTGA...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
3UTR CAA 72 bp GAGCACAGGCATCTTCAAATCAGCCCTTTCCCGGCCTaGGGGATACTGAGGCACTCACTGTCATCTGACAAA +
Preference number: 4 (lower is better)
Translates to: EHRHLQISPFPA*GILRHSLSSDK
Trigger: TTTGTCAGATGACAGTGAGTGCCTCAGTATCCCCAAGGCCGGGAAAGGGCTGATTTGAAGATGCCTGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR TCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACGCTTTCTTGCACTGCTaGCAGGATTCCCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDAFLHC*QDSQVF
Trigger: AAACACCTGGGAATCCTGTCAGCAGTGCAAGAAAGC...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp GAGTTGCTGCTGATGACGAGCATCAGCGCACATCCACAGAGTCTGGCTGGAGTGCTGAACACCTTGCCATaGGGATCTGCAAACATTCTT +
Preference number: 4 (lower is better)
Translates to: ELLLMTSISAHPQSLAGVLNTLP*GSANIL
Trigger: AAGAATGTTTGCAGATCCTCATGGCAAGGTGTTCAG...CACTCCAGCCAGACTCTGTGGATGTGCGCTGATGCTCGTCATCAGCAGCAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR TCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCACAAACAACCAATCTTaGAGATCATCTTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVTNNQS*RSSLWT
Trigger: AGTCCACAAAGATGATCTTCAAGATTGGTTGTTTGT...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp GAGTTGCTGCTGATGACGAGCATCAGCGCACATCCACAGAGTCTGGCTGGAGTGTTCAGTGTCAGGTTCTaGGCTTCTTCTCGAACTTTG +
Preference number: 4 (lower is better)
Translates to: ELLLMTSISAHPQSLAGVFSVRF*ASSRTL
Trigger: CAAAGTTCGAGAAGAAGCTCAGAACCTGACACTGAA...CACTCCAGCCAGACTCTGTGGATGTGCGCTGATGCTCGTCATCAGCAGCAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACTAGGTACATGGGTATaGCGAATAATAAATCTGATT +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALGTWV*RIINLI
Trigger: AATCAGATTTATTATTCGGCATACCCATGTACCTAG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCACATGTATGTCTTCCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HRVWLECHVALLCLTLLSHVCLP*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGGAAGACATACATG...TGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp CCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCGGCTCCTTGGGATCTTaGTTCTCTTCTGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PQSLAGVPRSPALSHIIVGSLGS*FSSVLK
Trigger: CTTCAGCACAGAAGAGAAGCAAGATCCCAAGGAGCC...GACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCTGGGTCCATCTGCTTTaGCAGAGTTTCTATGTACTT +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGWVHLL*QSFYVL
Trigger: AAGTACATAGAAACTCTGGCAAAGCAGATGGACCCA...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACGAAATCAGCACTGACTaGGCTGCCTTCCGAACATCA +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDEISTD*AAFRTS
Trigger: TGATGTTCGGAAGGCAGCGCAGTCAGTGCTGATTTC...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp ACTGTTACAGTAGGGAGAGGGTGTGGAGTAATATCTCTTCTTGCTGCTAAAACGCCAGAGCTGGCTGGCTaGCGTCAGCAGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: TVTVGRGCGVISLLAAKTPELAG*RQQHHL
Trigger: GAGGTGATGCTGCTGACGGCAGCCAGCCAGCTCTGG...CGTTTTAGCAGCAAGAAGAGATATTACTCCACACCCTCTCCCTACTGTAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATGTTTGCATTTTGATTaGAGCCAGATTAATAGGGTA +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSACLHFD*SQINRV
Trigger: TACCCTATTAATCTGGCTGCAATCAAAATGCAAACA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATGTTTGCATTTTGATTaGAGCCAGATTAATAGGGTA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAACLHFD*SQINRV
Trigger: TACCCTATTAATCTGGCTGCAATCAAAATGCAAACA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SLRRAASCPLRDWEAPSASITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGAACAAACGTAGGTGCTaGAAAAAGCAATCATACTGT +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSNKRRC*KKQSYC
Trigger: ACAGTATGATTGCTTTTTCCAGCACCTACGTTTGTT...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCTTCAAGCTTGGCGTTTaGGTCTGGTCAACTGTAAAT +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGFKLGV*VWSTVN
Trigger: ATTTACAGTTGACCAGACCCAAACGCCAAGCTTGAA...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCAGATCATCAGGAAATTaGTCGGCGTCATCATCAAAC +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGRSSGN*SASSSN
Trigger: GTTTGATGATGACGCCGACCAATTTCCTGATGATCT...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCTTTGATGCACTGCTCTaGACTAATGGAAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGFDALL*TNGSSQ
Trigger: TTGGCTACTTCCATTAGTCCAGAGCAGTGCATCAAA...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCAAGACTTTTCTGATATaGTGGCTCAAGGGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGKTFLI*WLKGVV
Trigger: TACAACTCCCTTGAGCCATCATATCAGAAAAGTCTT...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACCTCACCACCTCTTTGTaGGGATCTTTATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDLTTSL*GSLCAS
Trigger: GGAAGCACATAAAGATCCTCACAAAGAGGTGGTGAG...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCCTCACCACCTCTTTGTaGGGATCTTTATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PQSLAGVPRSPALSHIIVLTTSL*GSLCAS
Trigger: GGAAGCACATAAAGATCCTCACAAAGAGGTGGTGAG...GACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR GCA 90 bp ACTGTTACAGTAGGGAGAGGGTGTGGAGTAATATCTCTTCTTGCTGCTAAAACGGACTCGTGTCCCTGCTaGTCTCTCTGCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: TVTVGRGCGVISLLAAKTDSCPC*SLCWLP
Trigger: GGGAAGCCAGCAGAGAGAGCAGCAGGGACACGAGTC...CGTTTTAGCAGCAAGAAGAGATATTACTCCACACCCTCTCCCTACTGTAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp CCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCTCTGTTGAGGACTTCTaGCACGTCTTCTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PQSLAGVPRSPALSHIIVSVEDF*HVFCLS
Trigger: AGACAGACAGAAGACGTGGCAGAAGTCCTCAACAGA...GACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTGTTTGCATTTTGATTaGAGCCAGATTAATAGGGTA +
Preference number: 4 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSCLHFD*SQINRV
Trigger: TACCCTATTAATCTGGCTGCAATCAAAATGCAAACA...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCTCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVSITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp CAGGAATATCTATTAGCCAGACTAGAGGCTTTCAGAGCACAGGCATCTTCAAATACGATACCCGGTAGTTaGTCGAGCCCACCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: QEYLLARLEAFRAQASSNTIPGS*SSPPSG
Trigger: CCCGCTGGGTGGGCTCGAGCAACTACCGGGTATCGT...ATTTGAAGATGCCTGTGCTCTGAAAGCCTCTAGTCTGGCTAATAGATATTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR CCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACGACTTTCTTGTGAGCTaGATGAGGACCTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDDFLVS*MRTCLT
Trigger: AGTCAGACAGGTCCTCATCCAGCTCACAAGAAAGTC...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CGGGGTAAAAGAAGGGACACGGCTTTAAATAAAGGTGGCAAGATCAAGAACCGAGAGGACTGGACCAGTTaGCTGGTGACCGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: RGKRRDTALNKGGKIKNREDWTS*LVTEVL
Trigger: CAACACCTCGGTCACCAGCCAACTGGTCCAGTCCTC...TCGGTTCTTGATCTTGCCACCTTTATTTAAAGCCGTGTCCCTTCTTTTACCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACCTGAAGCTGAAATTCTaGATTGCCTCAGTGACGCCT +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDLKLKF*IASVTP
Trigger: AGGCGTCACTGAGGCAATCCAGAATTTCAGCTTCAG...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TTCCCGGCCTTGGGGATACTGAGGCACTCACTGTCATCTGACAAAATTGGTATCCACGCATTGGCACGCTaGTCCCAGTCATGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: FPALGILRHSLSSDKIGIHALAR*SQSCLS
Trigger: TGACAAACATGACTGGGACCAGCGTGCCAATGCGTG...GATACCAATTTTGTCAGATGACAGTGAGTGCCTCAGTATCCCCAAGGCCGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
3UTR CAA 72 bp GCTGCACATCCAGAGGTCGCCATGACTTTGGCACTATaGGGGACAAGATTAAAAAGCGTAGGGACGATGGCT +
Preference number: 4 (lower is better)
Translates to: AAHPEVAMTLAL*GTRLKSVGTMA
Trigger: AGCCATCGTCCCTACGCTTTTTAATCTTGTCCCCAATAGTGCCAAAGTCATGGCGACCTCTGGATGTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CAA 72 bp TTGGCATTTCCCACAGCAACAAGCGGTGTAGAAAGCTaGGCTCTCACCCGACCATCATCAGATGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LAFPTATSGVES*ALTRPSSDAVP
Trigger: TGGAACAGCATCTGATGATGGTCGGGTGAGAGCCAAGCTTTCTACACCGCTTGTTGCTGTGGGAAATGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CAA 72 bp ACCATTTTTGTCCGGCTTCTCCCTCTAGAGTCGGTCTaGGCATTTCCCACAGCAACAAGCGGTGTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TIFVRLLPLESV*AFPTATSGVES
Trigger: GCTTTCTACACCGCTTGTTGCTGTGGGAAATGCCAAGACCGACTCTAGAGGGAGAAGCCGGACAAAAATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGTCATGTTTGTCATCTaGCAAAATTTCCCTGATCTT +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGVMFVI*QNFPDL
Trigger: AAGATCAGGGAAATTTTGTCAGATGACAAACATGAC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp ATCCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTGTCTTTCCAGTGAATaGGTCTGCCATTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: IHRVWLECHVALLCLTLLCLSSE*VCHSCS
Trigger: GCTGCAAGAATGGCAGACTCATTCACTGGAAAGACA...CAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR TCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCAGGACTGATGCTATCTaGGTAGTTATATGGGTTATA +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGRTDAI*VVIWVI
Trigger: TATAACCCATATAACTACTCAGATAGCATCAGTCCT...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCCCTGGGTTAGCTTCATaGGTTCATACAGGGCAATTT +
Preference number: 4 (lower is better)
Translates to: PQSLAGVPRSPALSHIIVPGLAS*VHTGQF
Trigger: AAATTGCCCTGTATGAACTCATGAAGCTAACCCAGG...GACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR TCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACCCTGGGTTAGCTTCATaGGTTCATACAGGGCAATTT +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDPGLAS*VHTGQF
Trigger: AAATTGCCCTGTATGAACTCATGAAGCTAACCCAGG...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TCAGCCCTGAGAGGTAGAGTGAGAGCCCAATGGACAGAAGCCTCTTGCAGCATCGTTCATCCCAAACACTaGAAGATTCTTCCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: SALRGRVRAQWTEASCSIVHPKH*KILPGL
Trigger: TAACCCAGGAAGAATCTTTCAGTGTTTGGGATGAAC...GATGCTGCAAGAGGCTTCTGTCCATTGGGCTCTCACTCTACCTCTCAGGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR TCA 90 bp CACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCAGAAAGTTCTTGTGCTTaGAGCCAGAAGCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HRVWLECHVALLCLTLLSESSCA*SQKLAA
Trigger: AGCAGCTAGCTTCTGGCTTCAAGCACAAGAACTTTC...TGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR GCA 90 bp GAGTTGCTGCTGATGACGAGCATCAGCGCACATCCACAGAGTCTGGCTGGAGTGAATAATAAATCTGATTaGTGCACATCCAGAGGTCGC +
Preference number: 4 (lower is better)
Translates to: ELLLMTSISAHPQSLAGVNNKSD*CTSRGR
Trigger: GCGACCTCTGGATGTGCAGCAATCAGATTTATTATT...CACTCCAGCCAGACTCTGTGGATGTGCGCTGATGCTCGTCATCAGCAGCAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCAAGCTTTCCGGACACTaGTTTCTGAATTATCATAAC +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGKLSGH*FLNYHN
Trigger: GTTATGATAATTCAGAAAGCAGTGTCCGGAAAGCTT...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCTTAGTAGCACCATCCTaGAAAGTTTTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGLVAPS*KVFGKA
Trigger: AGCTTTACCAAAAACTTTCCAGGATGGTGCTACTAA...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp TCAAAGGAAACCAGGTTCCACCATTCAACAAAAAGGTGCTGGTTGACTCCCATGCTCCCCATGGAACTCTaGGTGCCATTGCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: SKETRFHHSTKRCWLTPMLPMEL*VPLPVF
Trigger: GAACACTGGCAATGGCACCCAGAGTTCCATGGGGAG...CATGGGAGTCAACCAGCACCTTTTTGTTGAATGGTGGAACCTGGTTTCCTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCAACAACTGTAGGTGCTaGAAAAAGCAATCATACTGT +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGNNCRC*KKQSYC
Trigger: ACAGTATGATTGCTTTTTCCAGCACCTACAGTTGTT...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR TCA 90 bp TTCCCGGCCTTGGGGATACTGAGGCACTCACTGTCATCTGACAAAATTGGTATCGAAAGTTCTTGTGCTTaGAGCCAGAAGCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FPALGILRHSLSSDKIGIESSCA*SQKLAA
Trigger: AGCAGCTAGCTTCTGGCTTCAAGCACAAGAACTTTC...GATACCAATTTTGTCAGATGACAGTGAGTGCCTCAGTATCCCCAAGGCCGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR GCA 90 bp TCAGCCCTGAGAGGTAGAGTGAGAGCCCAATGGACAGAAGCCTCTTGCAGCATCTCCAACAAACGTAGGTaGTGGAAAAAGCAATCATAC +
Preference number: 4 (lower is better)
Translates to: SALRGRVRAQWTEASCSISNKRR*WKKQSY
Trigger: GTATGATTGCTTTTTCCAGCACCTACGTTTGTTGGA...GATGCTGCAAGAGGCTTCTGTCCATTGGGCTCTCACTCTACCTCTCAGGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCCTAGGTACATGGGTATaGCGAATAATAAATCTGATT +
Preference number: 4 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGLGTWV*RIINLI
Trigger: AATCAGATTTATTATTCGGCATACCCATGTACCTAG...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp AGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCAGTAGCTGAAATTCTGGATTaGCTCAGTGACGCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: RVWLECHVALLCLTLLSVAEILD*LSDASK
Trigger: CTTAGAGGCGTCACTGAGGCAATCCAGAATTTCAGC...TACTGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp GAGTTGCTGCTGATGACGAGCATCAGCGCACATCCACAGAGTCTGGCTGGAGTGAAGCTTTCCGGACACTaGTTTCTGAATTATCATAAC +
Preference number: 4 (lower is better)
Translates to: ELLLMTSISAHPQSLAGVKLSGH*FLNYHN
Trigger: GTTATGATAATTCAGAAAGCAGTGTCCGGAAAGCTT...CACTCCAGCCAGACTCTGTGGATGTGCGCTGATGCTCGTCATCAGCAGCAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR CCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTTTGATGCACTGCTCTaGACTAATGGAAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDFDALL*TNGSSQ
Trigger: TTGGCTACTTCCATTAGTCCAGAGCAGTGCATCAAA...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CGTAGCCCTGCTTTGTCTCACATTATTGTCAGTATTTCTAGCATAGGACATGATCAGAAACATCAGCAGTaGGGTCCGCGCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RSPALSHIIVSISSIGHDQKHQQ*GPRLQS
Trigger: GCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTG...ATCATGTCCTATGCTAGAAATACTGACAATAATGTGAGACAAAGCAGGGCTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR CCA 90 bp CAGGAATATCTATTAGCCAGACTAGAGGCTTTCAGAGCACAGGCATCTTCAAATTCCTTCTGCAGCACTTaGGCGCAGAAGTACTCGGCG +
Preference number: 4 (lower is better)
Translates to: QEYLLARLEAFRAQASSNSFCST*AQKYSA
Trigger: CGCCGAGTACTTCTGCGCCCAAGTGCTGCAGAAGGA...ATTTGAAGATGCCTGTGCTCTGAAAGCCTCTAGTCTGGCTAATAGATATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
3UTR CAA 72 bp CCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTaGTCTCACATTATTGTCAGTATTTCTAGCATAGGA +
Preference number: 4 (lower is better)
Translates to: PQSLAGVPRSPA*SHIIVSISSIG
Trigger: TCCTATGCTAGAAATACTGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
3UTR CAA 72 bp TCTTTCCTCTCTGACCAATTGGAGCTAGCACATCTGTaGAGGACTTCTGCCACGTCTTCTGTCTGTCTCATG +
Preference number: 4 (lower is better)
Translates to: SFLSDQLELAHL*RTSATSSVCLM
Trigger: CATGAGACAGACAGAAGACGTGGCAGAAGTCCTCAACAGATGTGCTAGCTCCAATTGGTCAGAGAGGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACAAGACTTTTCTGATATaGTGGCTCAAGGGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDKTFLI*WLKGVV
Trigger: TACAACTCCCTTGAGCCATCATATCAGAAAAGTCTT...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACCTTCCAGTGTTTTCATaGCAGTTAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDLPVFS*QLVLHS
Trigger: ACTATGCAGAACTAACTGTCATGAAAACACTGGAAG...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp ATCCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGCCGGACACTGCTTTCTaGATTATCATAACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: IHRVWLECHVALLCLTLLPDTAF*IIITLY
Trigger: ATACAGGGTTATGATAATTCAGAAAGCAGTGTCCGG...CAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR GCA 90 bp CACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCAAGCACTTTGATGCACTaGTCTGGACTAATGGAAGTA +
Preference number: 4 (lower is better)
Translates to: HRVWLECHVALLCLTLLSSTLMH*SGLMEV
Trigger: TACTTCCATTAGTCCAGAGCAGTGCATCAAAGTGCT...TGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR CCA 90 bp CACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCATTCAAGCTTGGCGTTTaGGTCTGGTCAACTGTAAAT +
Preference number: 4 (lower is better)
Translates to: HRVWLECHVALLCLTLLSFKLGV*VWSTVN
Trigger: ATTTACAGTTGACCAGACCCAAACGCCAAGCTTGAA...TGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CCA 90 bp ATCCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTTTGATGCACTGCTCTaGACTAATGGAAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: IHRVWLECHVALLCLTLLFDALL*TNGSSQ
Trigger: TTGGCTACTTCCATTAGTCCAGAGCAGTGCATCAAA...CAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR CCA 90 bp GAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCTTTACACAGAAACATCAGCAGTaGGGTCCGCGCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: EKAYDQSSIQFSRLTFFTQKHQQ*GPRLQS
Trigger: GCTCTGCAGGCGCGGACCCCACTGCTGATGTTTCTG...TGTAAAGAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CCA 90 bp TTCCCGGCCTTGGGGATACTGAGGCACTCACTGTCATCTGACAAAATTGGTATCAGTCAATCTCTTCTCTaGCAAGTCCTCATGACTCAG +
Preference number: 4 (lower is better)
Translates to: FPALGILRHSLSSDKIGISQSLL*QVLMTQ
Trigger: CTGAGTCATGAGGACTTGCCAGAGAAGAGATTGACT...GATACCAATTTTGTCAGATGACAGTGAGTGCCTCAGTATCCCCAAGGCCGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR TCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACGTCATGTTTGTCATCTaGCAAAATTTCCCTGATCTT +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDVMFVI*QNFPDL
Trigger: AAGATCAGGGAAATTTTGTCAGATGACAAACATGAC...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACAGGACTGATGCTATCTaGGTAGTTATATGGGTTATA +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDRTDAI*VVIWVI
Trigger: TATAACCCATATAACTACTCAGATAGCATCAGTCCT...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTCCCGGCCTTGGGGATACTGAGGCACTCACTGTCATCTGACAAAATTGGTATCCTCGAACTTTGTCTTTaGCATCTCCCATTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: FPALGILRHSLSSDKIGILELCL*HLPFCL
Trigger: TAGACAGAATGGGAGATGTCAAAGACAAAGTTCGAG...GATACCAATTTTGTCAGATGACAGTGAGTGCCTCAGTATCCCCAAGGCCGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR GCA 90 bp GAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCTTTACATCACTTCGAGAACGCTaGAGGCTTCCTGGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: EKAYDQSSIQFSRLTFFTSLRER*RLPGRG
Trigger: CCCCCTTCCAGGAAGCCTGCAGCGTTCTCGAAGTGA...TGTAAAGAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACGCATCATCATCTGAGTaGATTCCATATGATTCATAC +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDASSSE*IPYDSY
Trigger: GTATGAATCATATGGAATGCACTCAGATGATGATGC...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR GCA 90 bp AGGAAAGAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCCCATGGAACTCTGGGTaGCATTGCCAGTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: RKEKAYDQSSIQFSRLTFPWNSG*HCQCSG
Trigger: TCCGGAACACTGGCAATGGCACCCAGAGTTCCATGG...GAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTCTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp AGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCAGTAAGCACTTTGATGCACTaGTCTGGACTAATGGAAGTA +
Preference number: 4 (lower is better)
Translates to: RVWLECHVALLCLTLLSVSTLMH*SGLMEV
Trigger: TACTTCCATTAGTCCAGAGCAGTGCATCAAAGTGCT...TACTGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR GCA 90 bp CCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCAAGCTTTCCGGACACTaGTTTCTGAATTATCATAAC +
Preference number: 4 (lower is better)
Translates to: PQSLAGVPRSPALSHIIVKLSGH*FLNYHN
Trigger: GTTATGATAATTCAGAAAGCAGTGTCCGGAAAGCTT...GACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR CCA 90 bp AGGAAAGAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCGCTTCCCTGACCACCTaGGATCTGAGGTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: RKEKAYDQSSIQFSRLTFASLTT*DLRSLA
Trigger: AGCTAAGGACCTCAGATCCCAGGTGGTCAGGGAAGC...GAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTCTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CCA 90 bp GGAAGCGGGTCAGTTAAAATGTCAGCCCTGAGAGGTAGAGTGAGAGCCCAATGGTTAGTAGCACCATCCTaGAAAGTTTTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: GSGSVKMSALRGRVRAQWLVAPS*KVFGKA
Trigger: AGCTTTACCAAAAACTTTCCAGGATGGTGCTACTAA...CCATTGGGCTCTCACTCTACCTCTCAGGGCTGACATTTTAACTGACCCGCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTCACTCATATCTTCTTaGCTTCTGAAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDSLISS*LLKLKF
Trigger: GAATTTCAGCTTCAGAAGCCAAGAAGATATGAGTGA...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CCA 90 bp CGTAGCCCTGCTTTGTCTCACATTATTGTCAGTATTTCTAGCATAGGACATGATATAGTCACGGGAGCGTaGAGAGGAGTGGAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: RSPALSHIIVSISSIGHDIVTGA*RGVEWH
Trigger: ATGCCACTCCACTCCTCTCCACGCTCCCGTGACTAT...ATCATGTCCTATGCTAGAAATACTGACAATAATGTGAGACAAAGCAGGGCTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CCA 90 bp ATCCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGCTGAAAGATTCTTCCTaGGTTAGCTTCATGAGTTCA +
Preference number: 4 (lower is better)
Translates to: IHRVWLECHVALLCLTLLLKDSS*VSFMSS
Trigger: TGAACTCATGAAGCTAACCCAGGAAGAATCTTTCAG...CAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
3UTR CAA 72 bp AATCTGATTGCTGCACATCCAGAGGTCGCCATGACTTaGGCACTATTGGGGACAAGATTAAAAAGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: NLIAAHPEVAMT*ALLGTRLKSVG
Trigger: CCCTACGCTTTTTAATCTTGTCCCCAATAGTGCCAAAGTCATGGCGACCTCTGGATGTGCAGCAATCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CAA 72 bp TTTAGGGTCCCTCCTCACTGGCTCACTCATATCTTCTaGGCTTCTGAAGCTGAAATTCTGGATTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: FRVPPHWLTHIF*ASEAEILDCLS
Trigger: ACTGAGGCAATCCAGAATTTCAGCTTCAGAAGCCAAGAAGATATGAGTGAGCCAGTGAGGAGGGACCCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CAA 72 bp GGAAATTGGTCGGCGTCATCATCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAAGGACTGATGCTATCT +
Preference number: 4 (lower is better)
Translates to: GNWSASSSNMAS*RADLLKGLMLS
Trigger: AGATAGCATCAGTCCTTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGATGATGACGCCGACCAATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp CAGGAATATCTATTAGCCAGACTAGAGGCTTTCAGAGCACAGGCATCTTCAAATGCTTTCTTGCACTGCTaGCAGGATTCCCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: QEYLLARLEAFRAQASSNAFLHC*QDSQVF
Trigger: AAACACCTGGGAATCCTGTCAGCAGTGCAAGAAAGC...ATTTGAAGATGCCTGTGCTCTGAAAGCCTCTAGTCTGGCTAATAGATATTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR TCA 90 bp CGGGGTAAAAGAAGGGACACGGCTTTAAATAAAGGTGGCAAGATCAAGAACCGATCCAGCAACAAGCAGTaGTCTGATTTTCTTAAGCGC +
Preference number: 4 (lower is better)
Translates to: RGKRRDTALNKGGKIKNRSSNKQ*SDFLKR
Trigger: GCGCTTAAGAAAATCAGATCACTGCTTGTTGCTGGA...TCGGTTCTTGATCTTGCCACCTTTATTTAAAGCCGTGTCCCTTCTTTTACCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR TCA 90 bp TCAAAGGAAACCAGGTTCCACCATTCAACAAAAAGGTGCTGGTTGACTCCCATGAAGACTGTTGAAAGGTaGGCAACAGTGATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SKETRFHHSTKRCWLTPMKTVER*ATVMQA
Trigger: AGCTTGCATCACTGTTGCTCACCTTTCAACAGTCTT...CATGGGAGTCAACCAGCACCTTTTTGTTGAATGGTGGAACCTGGTTTCCTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR TCA 90 bp AGGAAAGAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCGCTATAGGAGCGTTCTaGACACGCACTAGAGGCATC +
Preference number: 4 (lower is better)
Translates to: RKEKAYDQSSIQFSRLTFAIGAF*TRTRGI
Trigger: GATGCCTCTAGTGCGTGTTCAGAACGCTCCTATAGC...GAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTCTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR TCA 90 bp ACTGTTACAGTAGGGAGAGGGTGTGGAGTAATATCTCTTCTTGCTGCTAAAACGTCTCCAAGAACATGCTaGACACCTTGCCATGAGGAT +
Preference number: 4 (lower is better)
Translates to: TVTVGRGCGVISLLAAKTSPRTC*TPCHED
Trigger: ATCCTCATGGCAAGGTGTTCAGCATGTTCTTGGAGA...CGTTTTAGCAGCAAGAAGAGATATTACTCCACACCCTCTCCCTACTGTAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR TCA 90 bp AGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCAGTAAGATTTGAATCGTGTTaGCAATCTATCCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: RVWLECHVALLCLTLLSVRFESC*QSIHKG
Trigger: GCCTTTGTGGATAGATTGTCAACACGATTCAAATCT...TACTGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR GCA 90 bp GAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCTTTACAGGGGGTTGGCTTTGCTaGCTCCCACAGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: EKAYDQSSIQFSRLTFFTGGWLC*LPQILF
Trigger: GAAGAGTATCTGTGGGAGGCAGCAAAGCCAACCCCC...TGTAAAGAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGTTTGCATTTTGATTaGAGCCAGATTAATAGGGTA +
Preference number: 4 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDCLHFD*SQINRV
Trigger: TACCCTATTAATCTGGCTGCAATCAAAATGCAAACA...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR TCA 90 bp TTCCCGGCCTTGGGGATACTGAGGCACTCACTGTCATCTGACAAAATTGGTATCGTCATGTTTGTCATCTaGCAAAATTTCCCTGATCTT +
Preference number: 4 (lower is better)
Translates to: FPALGILRHSLSSDKIGIVMFVI*QNFPDL
Trigger: AAGATCAGGGAAATTTTGTCAGATGACAAACATGAC...GATACCAATTTTGTCAGATGACAGTGAGTGCCTCAGTATCCCCAAGGCCGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR GCA 90 bp AGGAAAGAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCGAGGACCTGTCTGACTaGGGAAGAGAAGCTACACTT +
Preference number: 4 (lower is better)
Translates to: RKEKAYDQSSIQFSRLTFEDLSD*GREATL
Trigger: AAGTGTAGCTTCTCTTCCGCAGTCAGACAGGTCCTC...GAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTCTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp ATCCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTGTTTGCATTTTGATTaGAGCCAGATTAATAGGGTA +
Preference number: 4 (lower is better)
Translates to: IHRVWLECHVALLCLTLLCLHFD*SQINRV
Trigger: TACCCTATTAATCTGGCTGCAATCAAAATGCAAACA...CAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR TCA 90 bp CAGGAATATCTATTAGCCAGACTAGAGGCTTTCAGAGCACAGGCATCTTCAAATTTCAGTGTCAGGTTCTaGGCTTCTTCTCGAACTTTG +
Preference number: 4 (lower is better)
Translates to: QEYLLARLEAFRAQASSNFSVRF*ASSRTL
Trigger: CAAAGTTCGAGAAGAAGCTCAGAACCTGACACTGAA...ATTTGAAGATGCCTGTGCTCTGAAAGCCTCTAGTCTGGCTAATAGATATTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR GCA 90 bp AGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCAGTACTAGGTACATGGGTATaGCGAATAATAAATCTGATT +
Preference number: 4 (lower is better)
Translates to: RVWLECHVALLCLTLLSVLGTWV*RIINLI
Trigger: AATCAGATTTATTATTCGGCATACCCATGTACCTAG...TACTGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CCA 90 bp CGTAGCCCTGCTTTGTCTCACATTATTGTCAGTATTTCTAGCATAGGACATGATGCTTCACCAGGAAAGTaGTTCCTAAGGCCCATGTAT +
Preference number: 4 (lower is better)
Translates to: RSPALSHIIVSISSIGHDASPGK*FLRPMY
Trigger: ATACATGGGCCTTAGGAACCACTTTCCTGGTGAAGC...ATCATGTCCTATGCTAGAAATACTGACAATAATGTGAGACAAAGCAGGGCTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR TCA 90 bp CGTAGCCCTGCTTTGTCTCACATTATTGTCAGTATTTCTAGCATAGGACATGATTCCAGCAACAAGCAGTaGTCTGATTTTCTTAAGCGC +
Preference number: 4 (lower is better)
Translates to: RSPALSHIIVSISSIGHDSSNKQ*SDFLKR
Trigger: GCGCTTAAGAAAATCAGATCACTGCTTGTTGCTGGA...ATCATGTCCTATGCTAGAAATACTGACAATAATGTGAGACAAAGCAGGGCTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR TCA 90 bp CGGGGTAAAAGAAGGGACACGGCTTTAAATAAAGGTGGCAAGATCAAGAACCGAACAAACAACCAATCTTaGAGATCATCTTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: RGKRRDTALNKGGKIKNRTNNQS*RSSLWT
Trigger: AGTCCACAAAGATGATCTTCAAGATTGGTTGTTTGT...TCGGTTCTTGATCTTGCCACCTTTATTTAAAGCCGTGTCCCTTCTTTTACCCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CCA 90 bp CGGGGTAAAAGAAGGGACACGGCTTTAAATAAAGGTGGCAAGATCAAGAACCGATCACTCATATCTTCTTaGCTTCTGAAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: RGKRRDTALNKGGKIKNRSLISS*LLKLKF
Trigger: GAATTTCAGCTTCAGAAGCCAAGAAGATATGAGTGA...TCGGTTCTTGATCTTGCCACCTTTATTTAAAGCCGTGTCCCTTCTTTTACCCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR TCA 90 bp CAGGAATATCTATTAGCCAGACTAGAGGCTTTCAGAGCACAGGCATCTTCAAATAGATTTGAATCGTGTTaGCAATCTATCCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: QEYLLARLEAFRAQASSNRFESC*QSIHKG
Trigger: GCCTTTGTGGATAGATTGTCAACACGATTCAAATCT...ATTTGAAGATGCCTGTGCTCTGAAAGCCTCTAGTCTGGCTAATAGATATTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR GCA 90 bp CGTAGCCCTGCTTTGTCTCACATTATTGTCAGTATTTCTAGCATAGGACATGATAATAAATCTGATTGCTaGACATCCAGAGGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: RSPALSHIIVSISSIGHDNKSDC*TSRGRH
Trigger: ATGGCGACCTCTGGATGTGCAGCAATCAGATTTATT...ATCATGTCCTATGCTAGAAATACTGACAATAATGTGAGACAAAGCAGGGCTACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR GCA 90 bp CGGGGTAAAAGAAGGGACACGGCTTTAAATAAAGGTGGCAAGATCAAGAACCGATCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RGKRRDTALNKGGKIKNRSITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...TCGGTTCTTGATCTTGCCACCTTTATTTAAAGCCGTGTCCCTTCTTTTACCCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
3UTR CAA 72 bp GGTAAAGCTCCTAGTAACATTGTAAACTCTGGGGTATaGAGTTCAAATAAAGAAATCAGCACTGACTGCGCT +
Preference number: 4 (lower is better)
Translates to: GKAPSNIVNSGV*SSNKEISTDCA
Trigger: AGCGCAGTCAGTGCTGATTTCTTTATTTGAACTCAATACCCCAGAGTTTACAATGTTACTAGGAGCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
3UTR CAA 72 bp AAGGGTCTCCTTGGATACTCTCTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAGATTAATAGGGTAGTC +
Preference number: 4 (lower is better)
Translates to: KGLLGYSLYHFC*HFDCSQINRVV
Trigger: GACTACCCTATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGAGTATCCAAGGAGACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
CDS-3UTR TCA 90 bp AGGAAAGAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCAGGACTGATGCTATCTaGGTAGTTATATGGGTTATA +
Preference number: 4 (lower is better)
Translates to: RKEKAYDQSSIQFSRLTFRTDAI*VVIWVI
Trigger: TATAACCCATATAACTACTCAGATAGCATCAGTCCT...GAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTCTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
3UTR CAA 72 bp GAAACCAGGTTCCACCATTCAACAAAAAGGTGCTGGTaGACTCCCATGTCAATAATTAGTTTATCAAATGAG +
Preference number: 4 (lower is better)
Translates to: ETRFHHSTKRCW*TPMSIISLSNE
Trigger: CTCATTTGATAAACTAATTATTGACATGGGAGTCAACCAGCACCTTTTTGTTGAATGGTGGAACCTGGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR TCA 90 bp AACTCTTTAAGTAAGTTTGAAGACTTTTCTGATATGATGGCTCAAGGGAGTTGTCCTATTTCCATCCACTaGTTCCTCATCATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: NSLSKFEDFSDMMAQGSCPISIH*FLIIKA
Trigger: AGCTTTGATGATGAGGAATCAGTGGATGGAAATAGG...ACAACTCCCTTGAGCCATCATATCAGAAAAGTCTTCAAACTTACTTAAAGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
CDS GCA 90 bp ATGGCTCCGGGCGTGCCGAGGCAGAGCAGCAGCTCCTCGCCCGCCTaGAGCCGGCCGCTCACGTCCTTCTGCAGCACTTGGGCGCAGAAG +
Preference number: 5 (lower is better)
Translates to: MAPGVPRQSSSSSPA*SRPLTSFCSTWAQK
Trigger: CTTCTGCGCCCAAGTGCTGCAGAAGGACGTGAGCGGCCGGCTGCAGGCGGGCGAGGAGCTGCTGCTCTGCCTCGGCACGCCCGGAGCCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213663.2
ENSMUST00000216817.2
CDS CCA 90 bp CTGAGGCCCCACACACATCGGGGGCGTAGAGGGCACCAGTGGATCTaGAATGGTGTCTGGAGGCCAGCGGCTGGAAGGAGCGCACCGGAC +
Preference number: 5 (lower is better)
Translates to: LRPHTHRGRRGHQWI*NGVWRPAAGRSAPD
Trigger: GTCCGGTGCGCTCCTTCCAGCCGCTGGCCTCCAGACACCATTCCAGATCCACTGGTGCCCTCTACGCCCCCGATGTGTGTGGGGCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS CCA 90 bp CCGGACCTGAGGCCCCACACACATCGGGGGCGTAGAGGGCACCAGTaGATCTGGAATGGTGTCTGGAGGCCAGCGGCTGGAAGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: PDLRPHTHRGRRGHQ*IWNGVWRPAAGRSA
Trigger: TGCGCTCCTTCCAGCCGCTGGCCTCCAGACACCATTCCAGATCCACTGGTGCCCTCTACGCCCCCGATGTGTGTGGGGCCTCAGGTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS GCA 90 bp TGGAGGCCAGCGGCTGGAAGGAGCGCACCGGACTCGTGTCCCTGCTaGTCTCTCTGCTGGCTTCCCGGCTACAGCCTTGACTCACACTCG +
Preference number: 5 (lower is better)
Translates to: WRPAAGRSAPDSCPC*SLCWLPGYSLDSHS
Trigger: CGAGTGTGAGTCAAGGCTGTAGCCGGGAAGCCAGCAGAGAGAGCAGCAGGGACACGAGTCCGGTGCGCTCCTTCCAGCCGCTGGCCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS GCA 90 bp GTCTGGAGGCCAGCGGCTGGAAGGAGCGCACCGGACTCGTGTCCCTaGTGCTCTCTCTGCTGGCTTCCCGGCTACAGCCTTGACTCACAC +
Preference number: 5 (lower is better)
Translates to: VWRPAAGRSAPDSCP*CSLCWLPGYSLDSH
Trigger: GTGTGAGTCAAGGCTGTAGCCGGGAAGCCAGCAGAGAGAGCAGCAGGGACACGAGTCCGGTGCGCTCCTTCCAGCCGCTGGCCTCCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS CCA 90 bp ACACATCGGGGGCGTAGAGGGCACCAGTGGATCTGGAATGGTGTCTaGAGGCCAGCGGCTGGAAGGAGCGCACCGGACTCGTGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: THRGRRGHQWIWNGV*RPAAGRSAPDSCPC
Trigger: GCAGGGACACGAGTCCGGTGCGCTCCTTCCAGCCGCTGGCCTCCAGACACCATTCCAGATCCACTGGTGCCCTCTACGCCCCCGATGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGGAAGGGGGTTGGCTTaGCTGCCTCCCACAGATACT +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSGRGLA*LPPTDT
Trigger: AGTATCTGTGGGAGGCAGCAAAGCCAACCCCCTTCC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACTTCCTGGAAGGGGGTaGGCTTTGCTGCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALPGRG*ALLPPT
Trigger: TGTGGGAGGCAGCAAAGCCAACCCCCTTCCAGGAAG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCACTTCCTGGAAGGGGGTaGGCTTTGCTGCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: SLRRAASCPLRDWEAPSALPGRG*ALLPPT
Trigger: TGTGGGAGGCAGCAAAGCCAACCCCCTTCCAGGAAG...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCTGGTGACCGAGGTGTaGGTCTCGTCAAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLVTEV*VSSKDS
Trigger: GGAGTCCTTTGACGAGACCAACACCTCGGTCACCAG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGAGGACTGGACCAGTaGGCTGGTGACCGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSRGLDQ*AGDRGV
Trigger: AACACCTCGGTCACCAGCCAACTGGTCCAGTCCTCT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS CCA 90 bp CTAGGTGACTCCACAGAGGCCAGGCCAGAGCTCTCTCAACCTCACTaGCTACCAGGCTGCAGGACATGCACGCATTGGCACGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: LGDSTEARPELSQPH*LPGCRTCTHWHAGP
Trigger: GGGACCAGCGTGCCAATGCGTGCATGTCCTGCAGCCTGGTAGCCAGTGAGGTTGAGAGAGCTCTGGCCTGGCCTCTGTGGAGTCACCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCCATGTATGTCTTCCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSPCMSS*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGGAAGACATACATGG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGGAAGGGGGTTGGCTTaGCTGCCTCCCACAGATACT +
Preference number: 5 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAGRGLA*LPPTDT
Trigger: AGTATCTGTGGGAGGCAGCAAAGCCAACCCCCTTCC...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGGAAGGGGGTTGGCTTaGCTGCCTCCCACAGATACT +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAGRGLA*LPPTDT
Trigger: AGTATCTGTGGGAGGCAGCAAAGCCAACCCCCTTCC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACTGGTGACCGAGGTGTaGGTCTCGTCAAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALVTEV*VSSKDS
Trigger: GGAGTCCTTTGACGAGACCAACACCTCGGTCACCAG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAAGAGGACTGGACCAGTaGGCTGGTGACCGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAARGLDQ*AGDRGV
Trigger: AACACCTCGGTCACCAGCCAACTGGTCCAGTCCTCT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS CCA 90 bp TTTAGGACTCGCATGGCACTGACAGAGGACGACAACCGGCTGGACTaGCTGATCCCATATCCCGGACCTGAGGCCCCACACACATCGGGG +
Preference number: 5 (lower is better)
Translates to: FRTRMALTEDDNRLD*LIPYPGPEAPHTSG
Trigger: CCCCGATGTGTGTGGGGCCTCAGGTCCGGGATATGGGATCAGCCAGTCCAGCCGGTTGTCGTCCTCTGTCAGTGCCATGCGAGTCCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCTAGAGGCATCGCTGTaGGCATCATCATCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLEASL*ASSSEC
Trigger: GCACTCAGATGATGATGCCAACAGCGATGCCTCTAG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCGAACATCAGAGCTTTaGGGCTCTGTCGTCCAAGTG +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSRTSEL*GSVVQV
Trigger: CACTTGGACGACAGAGCCCAAAAGCTCTGATGTTCG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATTAGGTGCAGGAACCTaGAAGGCTGAAGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALGAGT*KAEAAD
Trigger: GTCAGCTGCTTCAGCCTTCAAGGTTCCTGCACCTAA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
ENSMUST00000215022.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGAGGTCGCCATGACTTaGGCACTATTGGGGACAAGA +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAEVAMT*ALLGTR
Trigger: TCTTGTCCCCAATAGTGCCAAAGTCATGGCGACCTC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCCATGTATGTCTTCCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSPCMSS*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGGAAGACATACATGG...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAATTGACCAGGACTCGTaGAGCACCAGAGCTCACAGT +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAIDQDS*STRAHS
Trigger: ACTGTGAGCTCTGGTGCTCAACGAGTCCTGGTCAAT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTGGCTCCTTGGGATCTaGCTTCTCTTCTGTGCTGAA +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSWLLGI*LLFCAE
Trigger: TTCAGCACAGAAGAGAAGCAAGATCCCAAGGAGCCA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACTAGAGGCATCGCTGTaGGCATCATCATCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALEASL*ASSSEC
Trigger: GCACTCAGATGATGATGCCAACAGCGATGCCTCTAG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGAGCTAGCACATCTGTaGAGGACTTCTGCCACGTCT +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAELAHL*RTSATS
Trigger: AGACGTGGCAGAAGTCCTCAACAGATGTGCTAGCTC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGGGCTTTCTGAACTTTaGCCTGAACAGAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSGLSEL*PEQSQA
Trigger: TGCTTGGCTCTGTTCAGGCAAAAGTTCAGAAAGCCC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAAGGAGTGGAGTGGCATaGAGTGGAGCAACGATGCTT +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAARSGVA*SGATML
Trigger: AAGCATCGTTGCTCCACTCAATGCCACTCCACTCCT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAAGGAGTGGAGTGGCATaGAGTGGAGCAACGATGCTT +
Preference number: 5 (lower is better)
Translates to: SLRRAASCPLRDWEAPSARSGVA*SGATML
Trigger: AAGCATCGTTGCTCCACTCAATGCCACTCCACTCCT...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGGGTAGTCAGCGGTTaGTATGATGGGACAAAGCAC +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSRVVSG*YDGTKH
Trigger: GTGCTTTGTCCCATCATACAAACCGCTGACTACCCT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGAGGTCGCCATGACTTaGGCACTATTGGGGACAAGA +
Preference number: 5 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVEVAMT*ALLGTR
Trigger: TCTTGTCCCCAATAGTGCCAAAGTCATGGCGACCTC...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCTCTTCCAGCTACAGTaGAAGGATTTGCTGTTGACC +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLFQLQ*KDLLLT
Trigger: GGTCAACAGCAAATCCTTCAACTGTAGCTGGAAGAG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp GAGTTGCTGCTGATGACGAGCATCAGCGCACATCCACAGAGTCTGGCTGGAGTGCTTCCTGGAAGGGGGTaGGCTTTGCTGCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: ELLLMTSISAHPQSLAGVLPGRG*ALLPPT
Trigger: TGTGGGAGGCAGCAAAGCCAACCCCCTTCCAGGAAG...CACTCCAGCCAGACTCTGTGGATGTGCGCTGATGCTCGTCATCAGCAGCAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGATTGACCAGGACTCGTaGAGCACCAGAGCTCACAGT +
Preference number: 5 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSIDQDS*STRAHS
Trigger: ACTGTGAGCTCTGGTGCTCAACGAGTCCTGGTCAAT...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCATTGACCAGGACTCGTaGAGCACCAGAGCTCACAGT +
Preference number: 5 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVIDQDS*STRAHS
Trigger: ACTGTGAGCTCTGGTGCTCAACGAGTCCTGGTCAAT...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCTAGAGGCATCGCTGTaGGCATCATCATCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSLEASL*ASSSEC
Trigger: GCACTCAGATGATGATGCCAACAGCGATGCCTCTAG...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGAGCTAGCACATCTGTaGAGGACTTCTGCCACGTCT +
Preference number: 5 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVELAHL*RTSATS
Trigger: AGACGTGGCAGAAGTCCTCAACAGATGTGCTAGCTC...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTTCCTCTCTGACCAATaGGAGCTAGCACATCTGTTG +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSFLSDQ*ELAHLL
Trigger: CAACAGATGTGCTAGCTCCAATTGGTCAGAGAGGAA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGGGCTTTCTGAACTTTaGCCTGAACAGAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAGLSEL*PEQSQA
Trigger: TGCTTGGCTCTGTTCAGGCAAAAGTTCAGAAAGCCC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCTTCAAGCTTGGCGTTaGGGTCTGGTCAACTGTAAA +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLQAWR*GLVNCK
Trigger: TTTACAGTTGACCAGACCCAAACGCCAAGCTTGAAG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCCTGGTGACCGAGGTGTaGGTCTCGTCAAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGLVTEV*VSSKDS
Trigger: GGAGTCCTTTGACGAGACCAACACCTCGGTCACCAG...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCAGGAGTGGAGTGGCATaGAGTGGAGCAACGATGCTT +
Preference number: 5 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVRSGVA*SGATML
Trigger: AAGCATCGTTGCTCCACTCAATGCCACTCCACTCCT...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTCCTTGAGGGCAGACTaGTTGAAAGGACTGATGCTA +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSSLRAD*LKGLML
Trigger: TAGCATCAGTCCTTTCAACAAGTCTGCCCTCAAGGA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGATGGCTCAAGGGAGTaGTACAATGTTTCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSDGSRE*YNVSAS
Trigger: TGAAGCTGAAACATTGTACAACTCCCTTGAGCCATC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTGGCTCCTTGGGATCTaGCTTCTCTTCTGTGCTGAA +
Preference number: 5 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSWLLGI*LLFCAE
Trigger: TTCAGCACAGAAGAGAAGCAAGATCCCAAGGAGCCA...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATTCCTCTCTGACCAATaGGAGCTAGCACATCTGTTG +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAFLSDQ*ELAHLL
Trigger: CAACAGATGTGCTAGCTCCAATTGGTCAGAGAGGAA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCACTTCAAGCTTGGCGTTaGGGTCTGGTCAACTGTAAA +
Preference number: 5 (lower is better)
Translates to: SLRRAASCPLRDWEAPSALQAWR*GLVNCK
Trigger: TTTACAGTTGACCAGACCCAAACGCCAAGCTTGAAG...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTTGGGTCCATCTGCTTaGCCAGAGTTTCTATGTACT +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLGPSA*PEFLCT
Trigger: AGTACATAGAAACTCTGGCAAAGCAGATGGACCCAA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTTGAGGGCAGACTTGTaGAAAGGACTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCTTTCAACAAGTCTGCCCTCAA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCCTTGAGGGCAGACTaGTTGAAAGGACTGATGCTA +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASLRAD*LKGLML
Trigger: TAGCATCAGTCCTTTCAACAAGTCTGCCCTCAAGGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATCCTTGAGGGCAGACTaGTTGAAAGGACTGATGCTA +
Preference number: 5 (lower is better)
Translates to: SLRRAASCPLRDWEAPSASLRAD*LKGLML
Trigger: TAGCATCAGTCCTTTCAACAAGTCTGCCCTCAAGGA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSSNMAS*RADLLK
Trigger: TTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGAGGGTAGTCAGCGGTTaGTATGATGGGACAAAGCAC +
Preference number: 5 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSRVVSG*YDGTKH
Trigger: GTGCTTTGTCCCATCATACAAACCGCTGACTACCCT...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTGATGACCAGTGGTaGAGTCCCAAAGATGTTCAA +
Preference number: 5 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAADDQW*SPKDVQ
Trigger: TTGAACATCTTTGGGACTCAACCACTGGTCATCAGC...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS GCA 90 bp AGGCCAGAGCTCTCTCAACCTCACTGGCTACCAGGCTGCAGGACATaGACGCATTGGCACGCTGGTCCCAGTCATGTTTGTCATCTGACA +
Preference number: 5 (lower is better)
Translates to: RPELSQPHWLPGCRT*THWHAGPSHVCHLT
Trigger: TGTCAGATGACAAACATGACTGGGACCAGCGTGCCAATGCGTGCATGTCCTGCAGCCTGGTAGCCAGTGAGGTTGAGAGAGCTCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCTGGTCCCAGTCATGTTaGTCATCTGACAAAATTTCC +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSWSQSC*SSDKIS
Trigger: GGAAATTTTGTCAGATGACAAACATGACTGGGACCA...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGATGGCTCAAGGGAGTaGTACAATGTTTCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAADGSRE*YNVSAS
Trigger: TGAAGCTGAAACATTGTACAACTCCCTTGAGCCATC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCGAAGAAAAAGGACGATaGAGACTTTCTTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSEEKGR*RLSCEL
Trigger: CAGCTCACAAGAAAGTCTCAATCGTCCTTTTTCTTC...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGCTGTTCCATCCATCTaGTCAGAAGTATCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAAVPSI*SEVSSS
Trigger: ACTAGAGGATACTTCTGACAAGATGGATGGAACAGC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCTTCCTCTCTGACCAATaGGAGCTAGCACATCTGTTG +
Preference number: 5 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVFLSDQ*ELAHLL
Trigger: CAACAGATGTGCTAGCTCCAATTGGTCAGAGAGGAA...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCTTCAAGCTTGGCGTTaGGGTCTGGTCAACTGTAAA +
Preference number: 5 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSLQAWR*GLVNCK
Trigger: TTTACAGTTGACCAGACCCAAACGCCAAGCTTGAAG...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCCTTCAAGCTTGGCGTTaGGGTCTGGTCAACTGTAAA +
Preference number: 5 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVLQAWR*GLVNCK
Trigger: TTTACAGTTGACCAGACCCAAACGCCAAGCTTGAAG...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATTGGGTCCATCTGCTTaGCCAGAGTTTCTATGTACT +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALGPSA*PEFLCT
Trigger: AGTACATAGAAACTCTGGCAAAGCAGATGGACCCAA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACAGGACCACTACATATaGTGTCACCATCCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAQDHYI*CHHPPF
Trigger: AAAAGGAGGATGGTGACACAATATGTAGTGGTCCTG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAASNMAS*RADLLK
Trigger: TTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCATCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: SLRRAASCPLRDWEAPSASNMAS*RADLLK
Trigger: TTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAAGATCATCAGGAAATaGGTCGGCGTCATCATCAAA +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSKIIRK*VGVIIK
Trigger: TTTGATGATGACGCCGACCAATTTCCTGATGATCTT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATGTTAAGGGTCTCCTaGGATACTCTCTCTATCACT +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSMLRVS*DTLSIT
Trigger: AGTGATAGAGAGAGTATCCAAGGAGACCCTTAACAT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATGGTCCCAGTCATGTTaGTCATCTGACAAAATTTCC +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAWSQSC*SSDKIS
Trigger: GGAAATTTTGTCAGATGACAAACATGACTGGGACCA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATGACTTTGGCACTATaGGGGACAAGATTAAAAAGC +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSMTLAL*GTRLKS
Trigger: GCTTTTTAATCTTGTCCCCAATAGTGCCAAAGTCAT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAGAAGAAAAAGGACGATaGAGACTTTCTTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAEEKGR*RLSCEL
Trigger: CAGCTCACAAGAAAGTCTCAATCGTCCTTTTTCTTC...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGAAGAAAAAGGACGATaGAGACTTTCTTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAEEKGR*RLSCEL
Trigger: CAGCTCACAAGAAAGTCTCAATCGTCCTTTTTCTTC...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACGGAAGGGGGTTGGCTTaGCTGCCTCCCACAGATACT +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDGRGLA*LPPTDT
Trigger: AGTATCTGTGGGAGGCAGCAAAGCCAACCCCCTTCC...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGCTGTTCCATCCATCTaGTCAGAAGTATCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVAVPSI*SEVSSS
Trigger: ACTAGAGGATACTTCTGACAAGATGGATGGAACAGC...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCATCCTGGAAAGTTTTaGGTAAAGCTCCTAGTAACA +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSHPGKF*VKLLVT
Trigger: TGTTACTAGGAGCTTTACCAAAAACTTTCCAGGATG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACAGAGGACTGGACCAGTaGGCTGGTGACCGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDRGLDQ*AGDRGV
Trigger: AACACCTCGGTCACCAGCCAACTGGTCCAGTCCTCT...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCCTCACTCATATCTTCTaGGCTTCTGAAGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSLTHIF*ASEAEI
Trigger: AATTTCAGCTTCAGAAGCCAAGAAGATATGAGTGAG...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCTTGAGGGCAGACTTGTaGAAAGGACTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCTTTCAACAAGTCTGCCCTCAA...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCTCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVSNMAS*RADLLK
Trigger: TTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAAAGATCATCAGGAAATaGGTCGGCGTCATCATCAAA +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAKIIRK*VGVIIK
Trigger: TTTGATGATGACGCCGACCAATTTCCTGATGATCTT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCAGGGTAGTCAGCGGTTaGTATGATGGGACAAAGCAC +
Preference number: 5 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGRVVSG*YDGTKH
Trigger: GTGCTTTGTCCCATCATACAAACCGCTGACTACCCT...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAATGTTAAGGGTCTCCTaGGATACTCTCTCTATCACT +
Preference number: 5 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAMLRVS*DTLSIT
Trigger: AGTGATAGAGAGAGTATCCAAGGAGACCCTTAACAT...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCAGTCCTTCTGCAGCACTaGGGCGCAGAAGTACTCGGC +
Preference number: 5 (lower is better)
Translates to: HRVWLECHVALLCLTLLSVLLQH*GAEVLG
Trigger: GCCGAGTACTTCTGCGCCCAAGTGCTGCAGAAGGAC...TGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAATGACTTTGGCACTATaGGGGACAAGATTAAAAAGC +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAAMTLAL*GTRLKS
Trigger: GCTTTTTAATCTTGTCCCCAATAGTGCCAAAGTCAT...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAATGACTTTGGCACTATaGGGGACAAGATTAAAAAGC +
Preference number: 5 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAMTLAL*GTRLKS
Trigger: GCTTTTTAATCTTGTCCCCAATAGTGCCAAAGTCAT...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCATTACAGGAACTGACTTaGATGTGCAGTTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALQELT*MCSCLL
Trigger: TAACAAGCAACTGCACATCAAAGTCAGTTCCTGTAA...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACCCATGTATGTCTTCCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDPCMSS*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGGAAGACATACATGG...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCCTCTTCCAGCTACAGTaGAAGGATTTGCTGTTGACC +
Preference number: 5 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGLFQLQ*KDLLLT
Trigger: GGTCAACAGCAAATCCTTCAACTGTAGCTGGAAGAG...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCAACAAACAACCAATCTaGAAGATCATCTTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: LEEGSQLSSQRLGGAVGSNKQPI*KIIFVD
Trigger: GTCCACAAAGATGATCTTCAAGATTGGTTGTTTGTT...GCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp GAGTTGCTGCTGATGACGAGCATCAGCGCACATCCACAGAGTCTGGCTGGAGTGGGGCTTTCTGAACTTTaGCCTGAACAGAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: ELLLMTSISAHPQSLAGVGLSEL*PEQSQA
Trigger: TGCTTGGCTCTGTTCAGGCAAAAGTTCAGAAAGCCC...CACTCCAGCCAGACTCTGTGGATGTGCGCTGATGCTCGTCATCAGCAGCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCACATCCTGGAAAGTTTTaGGTAAAGCTCCTAGTAACA +
Preference number: 5 (lower is better)
Translates to: SLRRAASCPLRDWEAPSAHPGKF*VKLLVT
Trigger: TGTTACTAGGAGCTTTACCAAAAACTTTCCAGGATG...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACTCACTCATATCTTCTaGGCTTCTGAAGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALTHIF*ASEAEI
Trigger: AATTTCAGCTTCAGAAGCCAAGAAGATATGAGTGAG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGAAGATCATCAGGAAATaGGTCGGCGTCATCATCAAA +
Preference number: 5 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSKIIRK*VGVIIK
Trigger: TTTGATGATGACGCCGACCAATTTCCTGATGATCTT...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCAGCACTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LRRAASCPLRDWEAPSAALYHFC*HFDCSQ
Trigger: CTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAG...TGCTGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGGCACTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SLRRAASCPLRDWEAPSALYHFC*HFDCSQ
Trigger: CTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAG...TGCCGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTCCCGGCCTTGGGGATACTGAGGCACTCACTGTCATCTGACAAAATTGGTATCGTCCTTCTGCAGCACTaGGGCGCAGAAGTACTCGGC +
Preference number: 5 (lower is better)
Translates to: FPALGILRHSLSSDKIGIVLLQH*GAEVLG
Trigger: GCCGAGTACTTCTGCGCCCAAGTGCTGCAGAAGGAC...GATACCAATTTTGTCAGATGACAGTGAGTGCCTCAGTATCCCCAAGGCCGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR CAA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTCTCGAACTTTGTCTTaGACATCTCCCATTCTGTCT +
Preference number: 5 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSSRTLS*TSPILS
Trigger: AGACAGAATGGGAGATGTCAAAGACAAAGTTCGAGA...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR CAA 90 bp CTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCGTGTGATCCTTCATTTTaGTCAGGTGATGATGAACGC +
Preference number: 5 (lower is better)
Translates to: LSLRRAASCPLRDWEAPSCDPSF*SGDDER
Trigger: GCGTTCATCATCACCTGACAAAAATGAAGGATCACA...CGACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTTAGGTGCAGGAACCTaGAAGGCTGAAGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDLGAGT*KAEAAD
Trigger: GTCAGCTGCTTCAGCCTTCAAGGTTCCTGCACCTAA...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
ENSMUST00000215022.2
CDS-3UTR CAA 90 bp GTCGGTCTTGGCATTTCCCACAGCAACAAGCGGTGTAGAAAGCTTGGCTCTCACTTAGGTGCAGGAACCTaGAAGGCTGAAGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: VGLGISHSNKRCRKLGSHLGAGT*KAEAAD
Trigger: GTCAGCTGCTTCAGCCTTCAAGGTTCCTGCACCTAA...GTGAGAGCCAAGCTTTCTACACCGCTTGTTGCTGTGGGAAATGCCAAGACCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2
CDS-3UTR CAA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGATGGCTCAAGGGAGTaGTACAATGTTTCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGDGSRE*YNVSAS
Trigger: TGAAGCTGAAACATTGTACAACTCCCTTGAGCCATC...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp GAGTTGCTGCTGATGACGAGCATCAGCGCACATCCACAGAGTCTGGCTGGAGTGTTCCTCTCTGACCAATaGGAGCTAGCACATCTGTTG +
Preference number: 5 (lower is better)
Translates to: ELLLMTSISAHPQSLAGVFLSDQ*ELAHLL
Trigger: CAACAGATGTGCTAGCTCCAATTGGTCAGAGAGGAA...CACTCCAGCCAGACTCTGTGGATGTGCGCTGATGCTCGTCATCAGCAGCAACTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACCGAACATCAGAGCTTTaGGGCTCTGTCGTCCAAGTG +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDRTSEL*GSVVQV
Trigger: CACTTGGACGACAGAGCCCAAAAGCTCTGATGTTCG...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCCTCACTCATATCTTCTaGGCTTCTGAAGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVLTHIF*ASEAEI
Trigger: AATTTCAGCTTCAGAAGCCAAGAAGATATGAGTGAG...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCTGGCTCCTTGGGATCTaGCTTCTCTTCTGTGCTGAA +
Preference number: 5 (lower is better)
Translates to: PQSLAGVPRSPALSHIIVWLLGI*LLFCAE
Trigger: TTCAGCACAGAAGAGAAGCAAGATCCCAAGGAGCCA...GACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp CCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCGCCGTCAACAAACAACCAATCTaGAAGATCATCTTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: PFLEEGSQLSSQRLGGAVNKQPI*KIIFVD
Trigger: GTCCACAAAGATGATCTTCAAGATTGGTTGTTTGTT...GACGGCGCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCATGTTAAGGGTCTCCTaGGATACTCTCTCTATCACT +
Preference number: 5 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGMLRVS*DTLSIT
Trigger: AGTGATAGAGAGAGTATCCAAGGAGACCCTTAACAT...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCTTACAGGAACTGACTTaGATGTGCAGTTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGLQELT*MCSCLL
Trigger: TAACAAGCAACTGCACATCAAAGTCAGTTCCTGTAA...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACCTCTTCCAGCTACAGTaGAAGGATTTGCTGTTGACC +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDLFQLQ*KDLLLT
Trigger: GGTCAACAGCAAATCCTTCAACTGTAGCTGGAAGAG...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp GAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTGGGAGGCCATCCTGGAAAGTTTTaGGTAAAGCTCCTAGTAACA +
Preference number: 5 (lower is better)
Translates to: ECPFLEEGSQLSSQRLGGHPGKF*VKLLVT
Trigger: TGTTACTAGGAGCTTTACCAAAAACTTTCCAGGATG...GCCTCCCAGTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTTGGGTCCATCTGCTTaGCCAGAGTTTCTATGTACT +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDLGPSA*PEFLCT
Trigger: AGTACATAGAAACTCTGGCAAAGCAGATGGACCCAA...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp ACTGTTACAGTAGGGAGAGGGTGTGGAGTAATATCTCTTCTTGCTGCTAAAACGCTGGTGACCGAGGTGTaGGTCTCGTCAAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: TVTVGRGCGVISLLAAKTLVTEV*VSSKDS
Trigger: GGAGTCCTTTGACGAGACCAACACCTCGGTCACCAG...CGTTTTAGCAGCAAGAAGAGATATTACTCCACACCCTCTCCCTACTGTAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACCAGGACCACTACATATaGTGTCACCATCCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDQDHYI*CHHPPF
Trigger: AAAAGGAGGATGGTGACACAATATGTAGTGGTCCTG...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTTGAGGGCAGACTTGTaGAAAGGACTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCTTTCAACAAGTCTGCCCTCAA...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCACGAGATCGAAAGTTCTaGTGCTTGAAGCCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: HRVWLECHVALLCLTLLSRDRKF*CLKPEA
Trigger: AGCTTCTGGCTTCAAGCACAAGAACTTTCGATCTCG...TGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACATGTTAAGGGTCTCCTaGGATACTCTCTCTATCACT +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDMLRVS*DTLSIT
Trigger: AGTGATAGAGAGAGTATCCAAGGAGACCCTTAACAT...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCATGGTCCCAGTCATGTTaGTCATCTGACAAAATTTCC +
Preference number: 5 (lower is better)
Translates to: HRVWLECHVALLCLTLLSWSQSC*SSDKIS
Trigger: GGAAATTTTGTCAGATGACAAACATGACTGGGACCA...TGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR CAA 90 bp ATCCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTGGTCCCAGTCATGTTaGTCATCTGACAAAATTTCC +
Preference number: 5 (lower is better)
Translates to: IHRVWLECHVALLCLTLLWSQSC*SSDKIS
Trigger: GGAAATTTTGTCAGATGACAAACATGACTGGGACCA...CAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACTTACAGGAACTGACTTaGATGTGCAGTTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDLQELT*MCSCLL
Trigger: TAACAAGCAACTGCACATCAAAGTCAGTTCCTGTAA...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp ATCCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGGAAGAAAAAGGACGATaGAGACTTTCTTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: IHRVWLECHVALLCLTLLEEKGR*RLSCEL
Trigger: CAGCTCACAAGAAAGTCTCAATCGTCCTTTTTCTTC...CAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp ACTGTTACAGTAGGGAGAGGGTGTGGAGTAATATCTCTTCTTGCTGCTAAAACGCGAACATCAGAGCTTTaGGGCTCTGTCGTCCAAGTG +
Preference number: 5 (lower is better)
Translates to: TVTVGRGCGVISLLAAKTRTSEL*GSVVQV
Trigger: CACTTGGACGACAGAGCCCAAAAGCTCTGATGTTCG...CGTTTTAGCAGCAAGAAGAGATATTACTCCACACCCTCTCCCTACTGTAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp GGAAGCGGGTCAGTTAAAATGTCAGCCCTGAGAGGTAGAGTGAGAGCCCAATGGCATCCTGGAAAGTTTTaGGTAAAGCTCCTAGTAACA +
Preference number: 5 (lower is better)
Translates to: GSGSVKMSALRGRVRAQWHPGKF*VKLLVT
Trigger: TGTTACTAGGAGCTTTACCAAAAACTTTCCAGGATG...CCATTGGGCTCTCACTCTACCTCTCAGGGCTGACATTTTAACTGACCCGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACCTCACTCATATCTTCTaGGCTTCTGAAGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDLTHIF*ASEAEI
Trigger: AATTTCAGCTTCAGAAGCCAAGAAGATATGAGTGAG...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp CGGGGTAAAAGAAGGGACACGGCTTTAAATAAAGGTGGCAAGATCAAGAACCGAAGGGTAGTCAGCGGTTaGTATGATGGGACAAAGCAC +
Preference number: 5 (lower is better)
Translates to: RGKRRDTALNKGGKIKNRRVVSG*YDGTKH
Trigger: GTGCTTTGTCCCATCATACAAACCGCTGACTACCCT...TCGGTTCTTGATCTTGCCACCTTTATTTAAAGCCGTGTCCCTTCTTTTACCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR CAA 90 bp ATCCACAGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGGCTTCTTCTCGAACTTaGTCTTTGACATCTCCCATT +
Preference number: 5 (lower is better)
Translates to: IHRVWLECHVALLCLTLLASSRT*SLTSPI
Trigger: AATGGGAGATGTCAAAGACAAAGTTCGAGAAGAAGC...CAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCTGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR CAA 90 bp CGGGGTAAAAGAAGGGACACGGCTTTAAATAAAGGTGGCAAGATCAAGAACCGACGAAAGTTCTTGTGCTaGAAGCCAGAAGCTAGCTGC +
Preference number: 5 (lower is better)
Translates to: RGKRRDTALNKGGKIKNRRKFLC*KPEASC
Trigger: GCAGCTAGCTTCTGGCTTCAAGCACAAGAACTTTCG...TCGGTTCTTGATCTTGCCACCTTTATTTAAAGCCGTGTCCCTTCTTTTACCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213663.2
CDS-3UTR CAA 90 bp TTCCCGGCCTTGGGGATACTGAGGCACTCACTGTCATCTGACAAAATTGGTATCTGGTCCCAGTCATGTTaGTCATCTGACAAAATTTCC +
Preference number: 5 (lower is better)
Translates to: FPALGILRHSLSSDKIGIWSQSC*SSDKIS
Trigger: GGAAATTTTGTCAGATGACAAACATGACTGGGACCA...GATACCAATTTTGTCAGATGACAGTGAGTGCCTCAGTATCCCCAAGGCCGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR CAA 90 bp CGGGGTAAAAGAAGGGACACGGCTTTAAATAAAGGTGGCAAGATCAAGAACCGACTCTTCCAGCTACAGTaGAAGGATTTGCTGTTGACC +
Preference number: 5 (lower is better)
Translates to: RGKRRDTALNKGGKIKNRLFQLQ*KDLLLT
Trigger: GGTCAACAGCAAATCCTTCAACTGTAGCTGGAAGAG...TCGGTTCTTGATCTTGCCACCTTTATTTAAAGCCGTGTCCCTTCTTTTACCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp CTGTACTTGAGTGTCCTTTCCTTGAGGAGGGCAGCCAGTTGTCCTCTCAGAGACAACAAACAACCAATCTaGAAGATCATCTTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: LYLSVLSLRRAASCPLRDNKQPI*KIIFVD
Trigger: GTCCACAAAGATGATCTTCAAGATTGGTTGTTTGTT...GTCTCTGAGAGGACAACTGGCTGCCCTCCTCAAGGAAAGGACACTCAAGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111838.10
ENSMUST00000166734.10
ENSMUST00000214522.2
CDS-3UTR CAA 90 bp TTCCCGGCCTTGGGGATACTGAGGCACTCACTGTCATCTGACAAAATTGGTATCGCTTCTTCTCGAACTTaGTCTTTGACATCTCCCATT +
Preference number: 5 (lower is better)
Translates to: FPALGILRHSLSSDKIGIASSRT*SLTSPI
Trigger: AATGGGAGATGTCAAAGACAAAGTTCGAGAAGAAGC...GATACCAATTTTGTCAGATGACAGTGAGTGCCTCAGTATCCCCAAGGCCGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR CAA 90 bp AGGAAAGAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCTTAGGTGCAGGAACCTaGAAGGCTGAAGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: RKEKAYDQSSIQFSRLTFLGAGT*KAEAAD
Trigger: GTCAGCTGCTTCAGCCTTCAAGGTTCCTGCACCTAA...GAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTCTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp CGTAGCCCTGCTTTGTCTCACATTATTGTCAGTATTTCTAGCATAGGACATGATTTAGGTGCAGGAACCTaGAAGGCTGAAGCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: RSPALSHIIVSISSIGHDLGAGT*KAEAAD
Trigger: GTCAGCTGCTTCAGCCTTCAAGGTTCCTGCACCTAA...ATCATGTCCTATGCTAGAAATACTGACAATAATGTGAGACAAAGCAGGGCTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR CAA 90 bp AGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCAGTAATGACTTTGGCACTATaGGGGACAAGATTAAAAAGC +
Preference number: 5 (lower is better)
Translates to: RVWLECHVALLCLTLLSVMTLAL*GTRLKS
Trigger: GCTTTTTAATCTTGTCCCCAATAGTGCCAAAGTCAT...TACTGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp CGTAGCCCTGCTTTGTCTCACATTATTGTCAGTATTTCTAGCATAGGACATGATGAGCTAGCACATCTGTaGAGGACTTCTGCCACGTCT +
Preference number: 5 (lower is better)
Translates to: RSPALSHIIVSISSIGHDELAHL*RTSATS
Trigger: AGACGTGGCAGAAGTCCTCAACAGATGTGCTAGCTC...ATCATGTCCTATGCTAGAAATACTGACAATAATGTGAGACAAAGCAGGGCTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp AGAGTCTGGCTGGAGTGCCACGTAGCCCTGCTTTGTCTCACATTATTGTCAGTACTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RVWLECHVALLCLTLLSVLYHFC*HFDCSQ
Trigger: CTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAG...TACTGACAATAATGTGAGACAAAGCAGGGCTACGTGGCACTCCAGCCAGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111838.10
ENSMUST00000213663.2
CDS-3UTR CAA 90 bp CAGGAATATCTATTAGCCAGACTAGAGGCTTTCAGAGCACAGGCATCTTCAAATCGAAAGTTCTTGTGCTaGAAGCCAGAAGCTAGCTGC +
Preference number: 5 (lower is better)
Translates to: QEYLLARLEAFRAQASSNRKFLC*KPEASC
Trigger: GCAGCTAGCTTCTGGCTTCAAGCACAAGAACTTTCG...ATTTGAAGATGCCTGTGCTCTGAAAGCCTCTAGTCTGGCTAATAGATATTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR CAA 90 bp GAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCTTTACAAGGAGTGGAGTGGCATaGAGTGGAGCAACGATGCTT +
Preference number: 5 (lower is better)
Translates to: EKAYDQSSIQFSRLTFFTRSGVA*SGATML
Trigger: AAGCATCGTTGCTCCACTCAATGCCACTCCACTCCT...TGTAAAGAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp ACTGTTACAGTAGGGAGAGGGTGTGGAGTAATATCTCTTCTTGCTGCTAAAACGTTGAGGGCAGACTTGTaGAAAGGACTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: TVTVGRGCGVISLLAAKTLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCTTTCAACAAGTCTGCCCTCAA...CGTTTTAGCAGCAAGAAGAGATATTACTCCACACCCTCTCCCTACTGTAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp CAGGAATATCTATTAGCCAGACTAGAGGCTTTCAGAGCACAGGCATCTTCAAATCGAGATCGAAAGTTCTaGTGCTTGAAGCCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: QEYLLARLEAFRAQASSNRDRKF*CLKPEA
Trigger: AGCTTCTGGCTTCAAGCACAAGAACTTTCGATCTCG...ATTTGAAGATGCCTGTGCTCTGAAAGCCTCTAGTCTGGCTAATAGATATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR CAA 90 bp CAGGAATATCTATTAGCCAGACTAGAGGCTTTCAGAGCACAGGCATCTTCAAATGCTGATGACCAGTGGTaGAGTCCCAAAGATGTTCAA +
Preference number: 5 (lower is better)
Translates to: QEYLLARLEAFRAQASSNADDQW*SPKDVQ
Trigger: TTGAACATCTTTGGGACTCAACCACTGGTCATCAGC...ATTTGAAGATGCCTGTGCTCTGAAAGCCTCTAGTCTGGCTAATAGATATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR CAA 90 bp TCAAAGGAAACCAGGTTCCACCATTCAACAAAAAGGTGCTGGTTGACTCCCATGTTACAGGAACTGACTTaGATGTGCAGTTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: SKETRFHHSTKRCWLTPMLQELT*MCSCLL
Trigger: TAACAAGCAACTGCACATCAAAGTCAGTTCCTGTAA...CATGGGAGTCAACCAGCACCTTTTTGTTGAATGGTGGAACCTGGTTTCCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp CAGGAATATCTATTAGCCAGACTAGAGGCTTTCAGAGCACAGGCATCTTCAAATTCTCGAACTTTGTCTTaGACATCTCCCATTCTGTCT +
Preference number: 5 (lower is better)
Translates to: QEYLLARLEAFRAQASSNSRTLS*TSPILS
Trigger: AGACAGAATGGGAGATGTCAAAGACAAAGTTCGAGA...ATTTGAAGATGCCTGTGCTCTGAAAGCCTCTAGTCTGGCTAATAGATATTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS-3UTR CAA 90 bp GAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCTTTACATTGGGTCCATCTGCTTaGCCAGAGTTTCTATGTACT +
Preference number: 5 (lower is better)
Translates to: EKAYDQSSIQFSRLTFFTLGPSA*PEFLCT
Trigger: AGTACATAGAAACTCTGGCAAAGCAGATGGACCCAA...TGTAAAGAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS-3UTR CAA 90 bp AGGAAAGAAAAAGCCTATGACCAATCATCCATCCAGTTTTCTCGGCTTACTTTCCTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RKEKAYDQSSIQFSRLTFLYHFC*HFDCSQ
Trigger: CTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAG...GAAAGTAAGCCGAGAAAACTGGATGGATGATTGGTCATAGGCTTTTTCTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000111838.10
CDS TCA 90 bp AAGCTTTTATCTTTGCAGACGCTCAAAATCATACCGCCAGAATTCTaGACTTCATCAAATTTGGCAAGTACCATTTCTAATCTAGCAGGG +
Preference number: 5 (lower is better)
Translates to: KLLSLQTLKIIPPEF*TSSNLASTISNLAG
Trigger: CCCTGCTAGATTAGAAATGGTACTTGCCAAATTTGATGAAGTTCAGAATTCTGGCGGTATGATTTTGAGCGTCTGCAAAGATAAAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000213663.2
ENSMUST00000216817.2
CDS GCA 72 bp TCCTCGCCCGCCTGCAGCCGGCCGCTCACGTCCTTCTaGAGCACTTGGGCGCAGAAGTACTCGGCGCCGCGG +
Preference number: 6 (lower is better)
Translates to: SSPACSRPLTSF*STWAQKYSAPR
Trigger: CCGCGGCGCCGAGTACTTCTGCGCCCAAGTGCTGCAGAAGGACGTGAGCGGCCGGCTGCAGGCGGGCGAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213663.2
ENSMUST00000216817.2
CDS GCA 72 bp TCGGATCGTCCTCCAGGTCCGGGATGGCTCCGGGCGTaGCGAGGCAGAGCAGCAGCTCCTCGCCCGCCTGCA +
Preference number: 6 (lower is better)
Translates to: SDRPPGPGWLRA*RGRAAAPRPPA
Trigger: TGCAGGCGGGCGAGGAGCTGCTGCTCTGCCTCGGCACGCCCGGAGCCATCCCGGACCTGGAGGACGATCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213663.2
ENSMUST00000216817.2
CDS CAA 72 bp CGCCTGCAGCCGGCCGCTCACGTCCTTCTGCAGCACTaGGGCGCAGAAGTACTCGGCGCCGCGGGGCTCCAT +
Preference number: 6 (lower is better)
Translates to: RLQPAAHVLLQH*GAEVLGAAGLH
Trigger: ATGGAGCCCCGCGGCGCCGAGTACTTCTGCGCCCAAGTGCTGCAGAAGGACGTGAGCGGCCGGCTGCAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213663.2
ENSMUST00000216817.2
CDS CCA 72 bp GGGCGTAGAGGGCACCAGTGGATCTGGAATGGTGTCTaGAGGCCAGCGGCTGGAAGGAGCGCACCGGACTCG +
Preference number: 6 (lower is better)
Translates to: GRRGHQWIWNGV*RPAAGRSAPDS
Trigger: CGAGTCCGGTGCGCTCCTTCCAGCCGCTGGCCTCCAGACACCATTCCAGATCCACTGGTGCCCTCTACGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS CCA 72 bp CCAGTGGATCTGGAATGGTGTCTGGAGGCCAGCGGCTaGAAGGAGCGCACCGGACTCGTGTCCCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: PVDLEWCLEASG*KERTGLVSLLL
Trigger: GAGCAGCAGGGACACGAGTCCGGTGCGCTCCTTCCAGCCGCTGGCCTCCAGACACCATTCCAGATCCACTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS CCA 72 bp AGGCCCCACACACATCGGGGGCGTAGAGGGCACCAGTaGATCTGGAATGGTGTCTGGAGGCCAGCGGCTGGA +
Preference number: 6 (lower is better)
Translates to: RPHTHRGRRGHQ*IWNGVWRPAAG
Trigger: TCCAGCCGCTGGCCTCCAGACACCATTCCAGATCCACTGGTGCCCTCTACGCCCCCGATGTGTGTGGGGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS CCA 72 bp CACACACATCGGGGGCGTAGAGGGCACCAGTGGATCTaGAATGGTGTCTGGAGGCCAGCGGCTGGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: HTHRGRRGHQWI*NGVWRPAAGRS
Trigger: GCTCCTTCCAGCCGCTGGCCTCCAGACACCATTCCAGATCCACTGGTGCCCTCTACGCCCCCGATGTGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS CCA 72 bp CGCATGGCACTGACAGAGGACGACAACCGGCTGGACTaGCTGATCCCATATCCCGGACCTGAGGCCCCACAC +
Preference number: 6 (lower is better)
Translates to: RMALTEDDNRLD*LIPYPGPEAPH
Trigger: GTGTGGGGCCTCAGGTCCGGGATATGGGATCAGCCAGTCCAGCCGGTTGTCGTCCTCTGTCAGTGCCATGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163895.3
CDS GCA 72 bp CTCTCTCAACCTCACTGGCTACCAGGCTGCAGGACATaGACGCATTGGCACGCTGGTCCCAGTCATGTTTGT +
Preference number: 6 (lower is better)
Translates to: LSQPHWLPGCRT*THWHAGPSHVC
Trigger: ACAAACATGACTGGGACCAGCGTGCCAATGCGTGCATGTCCTGCAGCCTGGTAGCCAGTGAGGTTGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS CCA 72 bp CCTCACTGGCTACCAGGCTGCAGGACATGCACGCATTaGCACGCTGGTCCCAGTCATGTTTGTCATCTGACA +
Preference number: 6 (lower is better)
Translates to: PHWLPGCRTCTH*HAGPSHVCHLT
Trigger: TGTCAGATGACAAACATGACTGGGACCAGCGTGCCAATGCGTGCATGTCCTGCAGCCTGGTAGCCAGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS CAA 72 bp ACCTCACTGGCTACCAGGCTGCAGGACATGCACGCATaGGCACGCTGGTCCCAGTCATGTTTGTCATCTGAC +
Preference number: 6 (lower is better)
Translates to: TSLATRLQDMHA*ARWSQSCLSSD
Trigger: GTCAGATGACAAACATGACTGGGACCAGCGTGCCAATGCGTGCATGTCCTGCAGCCTGGTAGCCAGTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS CAA 90 bp AGGCTGCAGGACATGCACGCATTGGCACGCTGGTCCCAGTCATGTTaGTCATCTGACAAAATTTCCCTGATCTTATTTAACGTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: RLQDMHALARWSQSC*SSDKISLILFNVSS
Trigger: TGAAGAGACGTTAAATAAGATCAGGGAAATTTTGTCAGATGACAAACATGACTGGGACCAGCGTGCCAATGCGTGCATGTCCTGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS CAA 72 bp GACATGCACGCATTGGCACGCTGGTCCCAGTCATGTTaGTCATCTGACAAAATTTCCCTGATCTTATTTAAC +
Preference number: 6 (lower is better)
Translates to: DMHALARWSQSC*SSDKISLILFN
Trigger: GTTAAATAAGATCAGGGAAATTTTGTCAGATGACAAACATGACTGGGACCAGCGTGCCAATGCGTGCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216817.2
CDS CAA 72 bp TTCTTAAGCGCATTGGCACGCTGGTCCCAGTCATGTTaGTCATCTGACAAAATTTCCCTGATCTTATTTAAC +
Preference number: 6 (lower is better)
Translates to: FLSALARWSQSC*SSDKISLILFN
Trigger: GTTAAATAAGATCAGGGAAATTTTGTCAGATGACAAACATGACTGGGACCAGCGTGCCAATGCGCTTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS CAA 90 bp GATCTGATTTTCTTAAGCGCATTGGCACGCTGGTCCCAGTCATGTTaGTCATCTGACAAAATTTCCCTGATCTTATTTAACGTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: DLIFLSALARWSQSC*SSDKISLILFNVSS
Trigger: TGAAGAGACGTTAAATAAGATCAGGGAAATTTTGTCAGATGACAAACATGACTGGGACCAGCGTGCCAATGCGCTTAAGAAAATCAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000111838.10
ENSMUST00000163895.3
ENSMUST00000166734.10
ENSMUST00000213663.2
ENSMUST00000214522.2
CDS TCA 72 bp TCTTTGCAGACGCTCAAAATCATACCGCCAGAATTCTaGACTTCATCAAATTTGGCAAGTACCATTTCTAAT +
Preference number: 6 (lower is better)
Translates to: SLQTLKIIPPEF*TSSNLASTISN
Trigger: ATTAGAAATGGTACTTGCCAAATTTGATGAAGTTCAGAATTCTGGCGGTATGATTTTGAGCGTCTGCAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213663.2
ENSMUST00000216817.2
CDS TCA 72 bp TTCTCGACTAGAATAGATCTGGCTACATTGTGTCTCTaGACAGAAGGAACATCTGTAAAAGCTTTTATAAAG +
Preference number: 6 (lower is better)
Translates to: FSTRIDLATLCL*TEGTSVKAFIK
Trigger: CTTTATAAAAGCTTTTACAGATGTTCCTTCTGTTCAGAGACACAATGTAGCCAGATCTATTCTAGTCGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215022.2