RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLASP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000064302

Ensembl transcript IDs: ENSMUST00000049404.13, ENSMUST00000070989.14, ENSMUST00000165223.8, ENSMUST00000178710.8, ENSMUST00000185405.7, ENSMUST00000186349.7, ENSMUST00000187713.7, ENSMUST00000188710.7, ENSMUST00000189262.7, ENSMUST00000189570.7, ENSMUST00000189738.7, ENSMUST00000190571.7, ENSMUST00000190733.7, ENSMUST00000191445.7, ENSMUST00000191823.6, ENSMUST00000192387.3, ENSMUST00000204325.2, ENSMUST00000204904.3, ENSMUST00000205176.2

Found 2269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCGACTGCGGCCCCGACTGTCGGAGGGTGTGGAGGCGACATTGGTaGTGCTCCCCGAGCTCTGCCGTCTCGTGCGGATCCGACCTAGGG +
Preference number: 1 (lower is better)
Translates to: RDCGPDCRRVWRRHW*CSPSSAVSCGSDLG
Trigger: CCCTAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 90 bp GACTGCGGCCCCGACTGTCGGAGGGTGTGGAGGCGACATTGGTGGTaGTCCCCGAGCTCTGCCGTCTCGTGCGGATCCGACCTAGGGACG +
Preference number: 1 (lower is better)
Translates to: DCGPDCRRVWRRHWW*SPSSAVSCGSDLGT
Trigger: CGTCCCTAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CCA 90 bp TGGCGCGACTGCGGCCCCGACTGTCGGAGGGTGTGGAGGCGACATTaGTGGTGCTCCCCGAGCTCTGCCGTCTCGTGCGGATCCGACCTA +
Preference number: 1 (lower is better)
Translates to: WRDCGPDCRRVWRRH*WCSPSSAVSCGSDL
Trigger: TAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CCA 90 bp GTGAAACCACTTTGGCGCGACTGCGGCCCCGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGCTCCCCGAGCTCTGCCGTCTCGTGC +
Preference number: 1 (lower is better)
Translates to: VKPLWRDCGPDCRRV*RRHWWCSPSSAVSC
Trigger: GCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 90 bp GTGTGGAGGCGACATTGGTGGTGCTCCCCGAGCTCTGCCGTCTCGTaGGGATCCGACCTAGGGACGCATAGGATCCTGGGGGCAGTGCTG +
Preference number: 1 (lower is better)
Translates to: VWRRHWWCSPSSAVS*GSDLGTHRILGAVL
Trigger: CAGCACTGCCCCCAGGATCCTATGCGTCCCTAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 90 bp TTGACCGGCTGCCAGGCTGAGACTGTGAAACCACTTTGGCGCGACTaGGGCCCCGACTGTCGGAGGGTGTGGAGGCGACATTGGTGGTGC +
Preference number: 1 (lower is better)
Translates to: LTGCQAETVKPLWRD*GPDCRRVWRRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTCTCAGCCTGGCAGCCGGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CCA 90 bp CAGGGGAACTTGACCGGCTGCCAGGCTGAGACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGACTGTCGGAGGGTGTGGAGGCGACAT +
Preference number: 1 (lower is better)
Translates to: QGNLTGCQAETVKPL*RDCGPDCRRVWRRH
Trigger: ATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTCTCAGCCTGGCAGCCGGTCAAGTTCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 90 bp AGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATaGGGTGGTGGTGGCATGCGAGTCTCCTCAGCATTTCGGGCAGCA +
Preference number: 1 (lower is better)
Translates to: SCQGSESGSGLCRPP*GGGGMRVSSAFRAA
Trigger: TGCTGCCCGAAATGCTGAGGAGACTCGCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CCA 90 bp GGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTaGTGGCATGCGAGTCTCCTCAGCATTTCGGGCAGCAGTCTTGAG +
Preference number: 1 (lower is better)
Translates to: GFRERQWALSPSMRW*WHASLLSISGSSLE
Trigger: CTCAAGACTGCTGCCCGAAATGCTGAGGAGACTCGCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CCA 90 bp TTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTaGCATGCGAGTCTCCTCAGCATTTCGGGCAGCAGTCTTGAGGTG +
Preference number: 1 (lower is better)
Translates to: FRERQWALSPSMRWW*HASLLSISGSSLEV
Trigger: CACCTCAAGACTGCTGCCCGAAATGCTGAGGAGACTCGCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CCA 90 bp TCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTaGTGGTGGCATGCGAGTCTCCTCAGCATTTCGGGCAGCAGTCTT +
Preference number: 1 (lower is better)
Translates to: SGFRERQWALSPSMR*WWHASLLSISGSSL
Trigger: AAGACTGCTGCCCGAAATGCTGAGGAGACTCGCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR TCA 90 bp CCTGCCTCCTTCTATCTCACTACCTCCCCGGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCGGGACACGATATCACAATCCTTCTT +
Preference number: 1 (lower is better)
Translates to: PASFYLTTSPALGGR*GCSPISGHDITILL
Trigger: AAGAAGGATTGTGATATCGTGTCCCGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGCCGGGGAGGTAGTGAGATAGAAGGAGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 90 bp ATTCCCGTGCTCTTGGCCCCGGAAAGGCACGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGTCCAAAGCCATCCTGCCTCCTTCTA +
Preference number: 1 (lower is better)
Translates to: IPVLLAPERHVEAAC*AGRSCCPKPSCLLL
Trigger: TAGAAGGAGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGGCCAAGAGCACGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CCA 90 bp GGGATACGGGTTATATTCCCGTGCTCTTGGCCCCGGAAAGGCACGTaGAGGCTGCGTGTTGAGCAGGGAGGTCTTGTTGTCCAAAGCCAT +
Preference number: 1 (lower is better)
Translates to: GIRVIFPCSWPRKGT*RLRVEQGGLVVQSH
Trigger: ATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGGCCAAGAGCACGGGAATATAACCCGTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CCA 90 bp AGCAACTCCAGCAGTGCGCCCTTCCGCTCCTCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGCAAGTCAGCCACCAGGTCTGAGTGG +
Preference number: 1 (lower is better)
Translates to: SNSSSAPFRSSTRSL*LDSSFSKSATRSEW
Trigger: CCACTCAGACCTGGTGGCTGACTTGCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGAGGAGCGGAAGGGCGCACTGCTGGAGTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR GCA 90 bp ATAGGTGTTGATGGTGTCGGAGTAGGGATACGGGTTATATTCCCGTaGTCTTGGCCCCGGAAAGGCACGTGGAGGCTGCGTGTTGAGCAG +
Preference number: 1 (lower is better)
Translates to: IGVDGVGVGIRVIFP*SWPRKGTWRLRVEQ
Trigger: CTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGGCCAAGAGCACGGGAATATAACCCGTATCCCTACTCCGACACCATCAACACCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 90 bp AAGTGGCCGGTTGAGACTCTCTTGAGAGCTGGAAGAGGATCGGTCTaGCTGGGGCAGAGACACGATGCTGTCCGAGTTCTTCAAGTGGGA +
Preference number: 1 (lower is better)
Translates to: KWPVETLLRAGRGSV*LGQRHDAVRVLQVG
Trigger: TCCCACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTCTCAACCGGCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 90 bp TGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTaGAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCG +
Preference number: 1 (lower is better)
Translates to: CALHGLVMSAGGADT*KYGSSFLSPQALLP
Trigger: CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR GCA 90 bp CTTGAGAGCTGGAAGAGGATCGGTCTGACTGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGTGGGACTGTAGGGCCTTCTGATACG +
Preference number: 1 (lower is better)
Translates to: LESWKRIGLTGAETR*CPSSSSGTVGPSDT
Trigger: CGTATCAGAAGGCCCTACAGTCCCACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCCAGCTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 90 bp AGGAAGGACTCTGGATGCAGTGCTGCCAGTGGGACTTCTTTTGGCTaGAAGTGGCCGGTTGAGACTCTCTTGAGAGCTGGAAGAGGATCG +
Preference number: 1 (lower is better)
Translates to: RKDSGCSAASGTSFG*KWPVETLLRAGRGS
Trigger: CGATCCTCTTCCAGCTCTCAAGAGAGTCTCAACCGGCCACTTTCAGCCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAGTCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 90 bp AAGTCAGCCACCAGGTCTGAGTGGTCAATGGGCACATCTCGGAGCTaGTCCATGTCATCGTCAAACACTGCTTCCTTCAGAGCCGTCTTG +
Preference number: 1 (lower is better)
Translates to: KSATRSEWSMGTSRS*SMSSSNTASFRAVL
Trigger: CAAGACGGCTCTGAAGGAAGCAGTGTTTGACGATGACATGGAGCAGCTCCGAGATGTGCCCATTGACCACTCAGACCTGGTGGCTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CCA 90 bp CTACATCTTCAGTCTGCCGCAGATAATGGGGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAGAGCACACGCTGGAGGCATCACTGT +
Preference number: 1 (lower is better)
Translates to: LHLQSAADNGECHHS*SHMSAQSTRWRHHC
Trigger: ACAGTGATGCCTCCAGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTCCCCATTATCTGCGGCAGACTGAAGATGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 90 bp GACACGATGCTGTCCGAGTTCTTCAAGTGGGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTGTGGTACAGGTGTTCTGCTTCTCGG +
Preference number: 1 (lower is better)
Translates to: DTMLSEFFKWDCRAF*YEDSKVWYRCSASR
Trigger: CCGAGAAGCAGAACACCTGTACCACACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTCCCACTTGAAGAACTCGGACAGCATCGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 90 bp AGGCTGGGAGATGGCTCTGCAGTTCATAGTGCTTGCCTCCAAGCCTaGCAACTTGAGTTCAATCCCTGGGACCCACATGGTGGAAAGAGA +
Preference number: 1 (lower is better)
Translates to: RLGDGSAVHSACLQA*QLEFNPWDPHGGKR
Trigger: TCTCTTTCCACCATGTGGGTCCCAGGGATTGAACTCAAGTTGTCAGGCTTGGAGGCAAGCACTATGAACTGCAGAGCCATCTCCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 90 bp GTGGTGGTGGCATGCGAGTCTCCTCAGCATTTCGGGCAGCAGTCTTaGGGTGGAGCCCAAGAGACAGAAATGATTGTACTCTTTCTACTC +
Preference number: 1 (lower is better)
Translates to: VVVACESPQHFGQQS*GGAQETEMIVLFLL
Trigger: GAGTAGAAAGAGTACAATCATTTCTGTCTCTTGGGCTCCACCTCAAGACTGCTGCCCGAAATGCTGAGGAGACTCGCATGCCACCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR TCA 90 bp GGAGCCCCTCTTTCCGTTCTGACCAGTTGGAACTGGCACAATGGTTaGGAACCTCTGCTACATCTTCAGTCTGCCGCAGATAATGGGGAA +
Preference number: 1 (lower is better)
Translates to: GAPLSVLTSWNWHNG*EPLLHLQSAADNGE
Trigger: TTCCCCATTATCTGCGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 90 bp GCAAACACAGTTCTGGGTGCTGTGAAGAGTCCTTCAGGGTCTAGGTaGTTTGAATATTGTCCTTTGGGGAGGTGGAGGCAAGGCAAGGCA +
Preference number: 1 (lower is better)
Translates to: ANTVLGAVKSPSGSR*FEYCPLGRWRQGKA
Trigger: TGCCTTGCCTTGCCTCCACCTCCCCAAAGGACAATATTCAAAGCACCTAGACCCTGAAGGACTCTTCACAGCACCCAGAACTGTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR GCA 90 bp GTCAATGGGCACATCTCGGAGCTGCTCCATGTCATCGTCAAACACTaGTTCCTTCAGAGCCGTCTTGTCATAGGTGTTGATGGTGTCGGA +
Preference number: 1 (lower is better)
Translates to: VNGHISELLHVIVKH*FLQSRLVIGVDGVG
Trigger: TCCGACACCATCAACACCTATGACAAGACGGCTCTGAAGGAAGCAGTGTTTGACGATGACATGGAGCAGCTCCGAGATGTGCCCATTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CCA 90 bp CCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTGCAAGTATaGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTC +
Preference number: 1 (lower is better)
Translates to: PWFGDVSRWCRHVQV*LFISQSPGLASVTF
Trigger: GAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCACCTGCTGACATCACCAAACCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CCA 90 bp TGGAGCCATATGAGCGCTCAGAGCACACGCTGGAGGCATCACTGTTaGCATCATCATCAGAGTACATTCCATAGGGCTCGTATCTCCTTC +
Preference number: 1 (lower is better)
Translates to: WSHMSAQSTRWRHHC*HHHQSTFHRARISF
Trigger: GAAGGAGATACGAGCCCTATGGAATGTACTCTGATGATGATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGCGCTCATATGGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CCA 90 bp GAATGCCACCATTCCTGGAGCCATATGAGCGCTCAGAGCACACGCTaGAGGCATCACTGTTGGCATCATCATCAGAGTACATTCCATAGG +
Preference number: 1 (lower is better)
Translates to: ECHHSWSHMSAQSTR*RHHCWHHHQSTFHR
Trigger: CCTATGGAATGTACTCTGATGATGATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CCA 90 bp TGCCTTATTTTTGTGACAGGGTTTCTCTTTGGTCTGGAAATACCTTaGGTGAGACTGGCTGGCCAGGAAGCCCCAGAGATCCTCCTGTGC +
Preference number: 1 (lower is better)
Translates to: CLIFVTGFLFGLEIP*VRLAGQEAPEILLC
Trigger: GCACAGGAGGATCTCTGGGGCTTCCTGGCCAGCCAGTCTCACCCAAGGTATTTCCAGACCAAAGAGAAACCCTGTCACAAAAATAAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 90 bp GATACGAGGACTCCAAAGTGTGGTACAGGTGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCCAGTAGCACTTCCTGGCTTCTATTC +
Preference number: 1 (lower is better)
Translates to: DTRTPKCGTGVLLLG*SDCGNPSSTSWLLF
Trigger: GAATAGAAGCCAGGAAGTGCTACTGGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAACACCTGTACCACACTTTGGAGTCCTCGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 90 bp GTTGTTGCTTGTCTGAGAAAACAGGGTCCAGACAAGCAGGGTACTTaGTCATACAGCTGTCCTGAATGGTTAGGGCTCACAGGAGCTACC +
Preference number: 1 (lower is better)
Translates to: VVACLRKQGPDKQGT*SYSCPEWLGLTGAT
Trigger: GGTAGCTCCTGTGAGCCCTAACCATTCAGGACAGCTGTATGAGCAAGTACCCTGCTTGTCTGGACCCTGTTTTCTCAGACAAGCAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR GCA 90 bp ATTCACATTAAAAAGGTGAACGCAGTAATGTGGTACTTGTCCCAGTaGTGGGGAAGTGGAGGCAGTCAGATCCCAGGGCTCACTAGCCAG +
Preference number: 1 (lower is better)
Translates to: IHIKKVNAVMWYLSQ*WGSGGSQIPGLTSQ
Trigger: CTGGCTAGTGAGCCCTGGGATCTGACTGCCTCCACTTCCCCAGCACTGGGACAAGTACCACATTACTGCGTTCACCTTTTTAATGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CCA 90 bp TTGTGGTTAGATAGCTCTTTCAGCAAGTCAGCCACCAGGTCTGAGTaGTCAATGGGCACATCTCGGAGCTGCTCCATGTCATCGTCAAAC +
Preference number: 1 (lower is better)
Translates to: LWLDSSFSKSATRSE*SMGTSRSCSMSSSN
Trigger: GTTTGACGATGACATGGAGCAGCTCCGAGATGTGCCCATTGACCACTCAGACCTGGTGGCTGACTTGCTGAAAGAGCTATCTAACCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR GCA 90 bp TTCAATTCTACTCGACTCAGTGTTCTTTGGCTCTTCAGTAAGTTCTaGAGGCCCAGGAGCCCCTCTTTCCGTTCTGACCAGTTGGAACTG +
Preference number: 1 (lower is better)
Translates to: FNSTRLSVLWLFSKF*RPRSPSFRSDQLEL
Trigger: CAGTTCCAACTGGTCAGAACGGAAAGAGGGGCTCCTGGGCCTGCAGAACTTACTGAAGAGCCAAAGAACACTGAGTCGAGTAGAATTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 90 bp CCAAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTaGACTATCTTGGTGGCCGATTGTTTGAGAGCATTTCTCTCTTCT +
Preference number: 1 (lower is better)
Translates to: PKQTTPNLGAQGPCV*TILVADCLRAFLSS
Trigger: AGAAGAGAGAAATGCTCTCAAACAATCGGCCACCAAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR TCA 90 bp TCCTTAGCAGAGAGTTTAAAGGCCCCGTCCAGAAGACGCAAGTGTTaGAAGAAGTTATCGTACTCAGCAGCCCCAGCCAAGAGTAACGAT +
Preference number: 1 (lower is better)
Translates to: SLAESLKAPSRRRKC*KKLSYSAAPAKSND
Trigger: ATCGTTACTCTTGGCTGGGGCTGCTGAGTACGATAACTTCTTTCAACACTTGCGTCTTCTGGACGGGGCCTTTAAACTCTCTGCTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CCA 90 bp TGTGTGGACACATCAGAGGAAGAGCTGCTGTTGCTGTTGGTAGTCTaGGCCCTCTTTATATATAAGTTCAGCAGCTTCATCTTGCTCCCC +
Preference number: 1 (lower is better)
Translates to: CVDTSEEELLLLLVV*ALFIYKFSSFILLP
Trigger: GGGGAGCAAGATGAAGCTGCTGAACTTATATATAAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTCTTCCTCTGATGTGTCCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR GCA 90 bp CAGGGTCAAGGTTTCCTCCTTGCTTCTCTTCTAGAAAAGTGTTGTTaGTTGTCTGAGAAAACAGGGTCCAGACAAGCAGGGTACTTGCTC +
Preference number: 1 (lower is better)
Translates to: QGQGFLLASLLEKCC*LSEKTGSRQAGYLL
Trigger: GAGCAAGTACCCTGCTTGTCTGGACCCTGTTTTCTCAGACAAGCAACAACACTTTTCTAGAAGAGAAGCAAGGAGGAAACCTTGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CCA 90 bp ACTTTGAGCCCTAGAATTCACATTAAAAAGGTGAACGCAGTAATGTaGTACTTGTCCCAGTGCTGGGGAAGTGGAGGCAGTCAGATCCCA +
Preference number: 1 (lower is better)
Translates to: TLSPRIHIKKVNAVM*YLSQCWGSGGSQIP
Trigger: TGGGATCTGACTGCCTCCACTTCCCCAGCACTGGGACAAGTACCACATTACTGCGTTCACCTTTTTAATGTGAATTCTAGGGCTCAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 90 bp TCGATGAAATCAGTTCTATCTGTACGTAGGTTCTGGGGATCACACTaGGGTTGTCAGGACTGCAAAGCAAATGCCATTACTGTCTGGGTC +
Preference number: 1 (lower is better)
Translates to: SMKSVLSVRRFWGSH*GCQDCKANAITVWV
Trigger: GACCCAGACAGTAATGGCATTTGCTTTGCAGTCCTGACAACCTCAGTGTGATCCCCAGAACCTACGTACAGATAGAACTGATTTCATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 90 bp AGGTTTCCTCCTTGCTTCTCTTCTAGAAAAGTGTTGTTGCTTGTCTaGGAAAACAGGGTCCAGACAAGCAGGGTACTTGCTCATACAGCT +
Preference number: 1 (lower is better)
Translates to: RFPPCFSSRKVLLLV*ENRVQTSRVLAHTA
Trigger: AGCTGTATGAGCAAGTACCCTGCTTGTCTGGACCCTGTTTTCTCAGACAAGCAACAACACTTTTCTAGAAGAGAAGCAAGGAGGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 90 bp CTTTCTCCATGTCATGTAGAAGACAGGAGGGGGTCTTGTCCCATCTaGCCATACTCTAAGAACATAAGCATAAAGAACACACAGCAATAC +
Preference number: 1 (lower is better)
Translates to: LSPCHVEDRRGSCPI*PYSKNISIKNTQQY
Trigger: GTATTGCTGTGTGTTCTTTATGCTTATGTTCTTAGAGTATGGTCAGATGGGACAAGACCCCCTCCTGTCTTCTACATGACATGGAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR GCA 90 bp TGTGTGCACATGGATGTGAAGGTGGTGTTCCTCAGGAATGATACTTaGCTTATTTTTGTGACAGGGTTTCTCTTTGGTCTGGAAATACCT +
Preference number: 1 (lower is better)
Translates to: CVHMDVKVVFLRNDT*LIFVTGFLFGLEIP
Trigger: AGGTATTTCCAGACCAAAGAGAAACCCTGTCACAAAAATAAGGCAAGTATCATTCCTGAGGAACACCACCTTCACATCCATGTGCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 90 bp CTAGATGAGTCAGTTTCAGAGATGGCTTCTATACCACCACAGTGGTaGTGGTTGAGCAGAGTGAACTTAAAGCCACTGAAATATATACTC +
Preference number: 1 (lower is better)
Translates to: LDESVSEMASIPPQW*WLSRVNLKPLKYIL
Trigger: GAGTATATATTTCAGTGGCTTTAAGTTCACTCTGCTCAACCATCACCACTGTGGTGGTATAGAAGCCATCTCTGAAACTGACTCATCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 90 bp ACACACACCCCAAACACAAAAACAAACATCAAAGTAGACAGCACATaGGGAATAACACTGAAGGCTGTTATTCCTCTGGCCTGTATGCAT +
Preference number: 1 (lower is better)
Translates to: THTPNTKTNIKVDST*GITLKAVIPLACMH
Trigger: ATGCATACAGGCCAGAGGAATAACAGCCTTCAGTGTTATTCCTCATGTGCTGTCTACTTTGATGTTTGTTTTTGTGTTTGGGGTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CCA 90 bp GGTGTGCACTATCATGCCAGGTCTTTCTTTTCTTTTTCTTTCTCCTaGACCTATATGGTTCAAGATGGCATTGACCTTATGGAGAGAGAA +
Preference number: 1 (lower is better)
Translates to: GVHYHARSFFSFSFS*TYMVQDGIDLMERE
Trigger: TTCTCTCTCCATAAGGTCAATGCCATCTTGAACCATATAGGTCCAGGAGAAAGAAAAAGAAAAGAAAGACCTGGCATGATAGTGCACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR GCA 90 bp ACAGACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTaGTATGTTCTGAGCCCAAGTCCATCAATAATAGCAAATCCCTTA +
Preference number: 1 (lower is better)
Translates to: TDRSFCVLTESKVWS*YVLSPSPSIIANPL
Trigger: TAAGGGATTTGCTATTATTGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CCA 90 bp CTCTTAACAGACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTaGTCCTGCTATGTTCTGAGCCCAAGTCCATCAATAATAGCAAAT +
Preference number: 1 (lower is better)
Translates to: LLTDRSFCVLTESKV*SCYVLSPSPSIIAN
Trigger: ATTTGCTATTATTGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTCTGTTAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR TCA 90 bp CAGACAGACAGAACAAACACACACACACACACTTTGAAAGTTCCATaGTGGCGAATGTTAAACATTTTAAAGCATGACTTTAGAAATCAA +
Preference number: 1 (lower is better)
Translates to: QTDRTNTHTHTLKVP*WRMLNILKHDFRNQ
Trigger: TTGATTTCTAAAGTCATGCTTTAAAATGTTTAACATTCGCCATCATGGAACTTTCAAAGTGTGTGTGTGTGTGTTTGTTCTGTCTGTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR CCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCACCCTCCATGAGGTGGTaGTGGCATGCGAGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAPSMRW*WHASLL
Trigger: GAGGAGACTCGCATGCCACCACCACCTCATGGAGGG...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATTCAGAGAGCGGCAGTaGGCTCTGTCGCCCTCCATG +
Preference number: 2 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAFRERQ*ALSPSM
Trigger: CATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATTCGGGCAGCAGTCTTaGGGTGGAGCCCAAGAGACA +
Preference number: 2 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAFGQQS*GGAQET
Trigger: TGTCTCTTGGGCTCCACCTCAAGACTGCTGCCCGAA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGATCGCCCTCCATGAGGTaGTGGTGGCATGCGAGTCTC +
Preference number: 2 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGSPSMR*WWHASL
Trigger: GAGACTCGCATGCCACCACCACCTCATGGAGGGCGA...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 2 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGTAACCTGGCCAGGCTaGACATGGCTACAAGGCTAC +
Preference number: 2 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAVTWPG*TWLQGY
Trigger: GTAGCCTTGTAGCCATGTGCAGCCTGGCCAGGTTAC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GCCCCGACTGTCGGAGGGTGTGGAGGCGACATTGGTGGTGCTCCCCGAGCTCTGGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 2 (lower is better)
Translates to: APTVGGCGGDIGGAPRALGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...CAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR TCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGAGCCTAGTGCAGGGTaGGAAGGATTCTCACTGATG +
Preference number: 2 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAEPSAG*EGFSLM
Trigger: CATCAGTGAGAATCCTTCTCACCCTGCACTAGGCTC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGAGGTGGTGGTGGCATaGGAGTCTCCTCAGCATTTC +
Preference number: 2 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGEVVVA*ESPQHF
Trigger: GAAATGCTGAGGAGACTCGCATGCCACCACCACCTC...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCACCAAGGCAGGGAAGTTaGCTCCCTCTGCAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAPRQGS*LPLQEK
Trigger: TTTCTCTTGCAGAGGGAGCCAACTTCCCTGCCTTGG...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGACAGTTCTGGGTGCTGTaGAGAGTCCTTCAGGGTCTA +
Preference number: 2 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGQFWVL*RVLQGL
Trigger: TAGACCCTGAAGGACTCTTCACAGCACCCAGAACTG...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGACTGGCTAGAGAGCTCTaGATTCTAAGAGCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGLAREL*ILRAVP
Trigger: GGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAG...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CCCCGGAAAGGCACGTGGAGGCTGCGTGTTGAGCAGGGAGGTCTTGTTGTCCAAGTCCTGCTGCTGGGGTaGCGGGAAGGTGTCCGGCCA +
Preference number: 2 (lower is better)
Translates to: PRKGTWRLRVEQGGLVVQVLLLG*REGVRP
Trigger: TGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGAC...TTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGCCCTCCATGGTTTGGTaGTGTCAGCAGGTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTPSMVW*CQQVVQ
Trigger: CTGCACCACCTGCTGACATCACCAAACCATGGAGGG...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAATGAGTCACCATGCCTaGCTTACCATTTGGAGGGTC +
Preference number: 2 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGMSHHA*LTIWRV
Trigger: GACCCTCCAAATGGTAAGTCAGGCATGGTGACTCAT...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GCCCCGACTGTCGGAGGGTGTGGAGGCGACATTGGTGGTGCTCCCCGAGCTCTGAGGAAGGACTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 2 (lower is better)
Translates to: APTVGGCGGDIGGAPRALRKDSG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGTCCTTCCT...CAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATTGAATATTGTCCTTTaGGGAGGTGGAGGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: PHSTGVHLESAGPAEGGALNIVL*GGGGKA
Trigger: TGCCTTGCCTCCACCTCCCCAAAGGACAATATTCAA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTTCGGGCAGCAGTCTTaGGGTGGAGCCCAAGAGACA +
Preference number: 2 (lower is better)
Translates to: VQRAAVGSVALHEVVVACFGQQS*GGAQET
Trigger: TGTCTCTTGGGCTCCACCTCAAGACTGCTGCCCGAA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAAGTTACAGTGGGCTCTaGACTAGAAGAGCACATGCT +
Preference number: 2 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGSYSGL*TRRAHA
Trigger: AGCATGTGCTCTTCTAGTGCAGAGCCCACTGTAACT...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTCCATGAGGTGGTGGTaGCATGCGAGTCTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: VQRAAVGSVALHEVVVACSMRWW*HASLLS
Trigger: GCTGAGGAGACTCGCATGCCACCACCACCTCATGGA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GCGGCCCCGACTGTCGGAGGGTGTGGAGGCGACATTGGTGGTGCTCCCCGAGCTCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 2 (lower is better)
Translates to: AAPTVGGCGGDIGGAPRAPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...AGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR TCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGCAGTTCTGGGTGCTGTaGAGAGTCCTTCAGGGTCTA +
Preference number: 2 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTQFWVL*RVLQGL
Trigger: TAGACCCTGAAGGACTCTTCACAGCACCCAGAACTG...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATTTTCTTGCCCAGACTaGAGTTCCACTTTGAGAACT +
Preference number: 2 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAFSCPD*SSTLRT
Trigger: AGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGCTGGCTAGAGAGCTCTaGATTCTAAGAGCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTLAREL*ILRAVP
Trigger: GGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAG...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CAA 90 bp CCCGGAAAGGCACGTGGAGGCTGCGTGTTGAGCAGGGAGGTCTTGTaGTCCAAAGCCATCCTGCCTCCTTCTATCTCACTACCTCCCCGG +
Preference number: 2 (lower is better)
Translates to: PGKARGGCVLSREVL*SKAILPPSISLPPR
Trigger: CCGGGGAGGTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CAA 90 bp GGCCCCGGAAAGGCACGTGGAGGCTGCGTGTTGAGCAGGGAGGTCTaGTTGTCCAAAGCCATCCTGCCTCCTTCTATCTCACTACCTCCC +
Preference number: 2 (lower is better)
Translates to: GPGKARGGCVLSREV*LSKAILPPSISLPP
Trigger: GGGAGGTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATCTTTAATGCAACCATaGGAACTTTGGTGGCATTAC +
Preference number: 2 (lower is better)
Translates to: PHSTGVHLESAGPAEGGASLMQP*ELWWHY
Trigger: GTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCACCCAAGAGACAGAAATaGTTGTACTCTTTCTACTCA +
Preference number: 2 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAPKRQK*LYSFYS
Trigger: TGAGTAGAAAGAGTACAATCATTTCTGTCTCTTGGG...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGATTTTCTTGCCCAGACTaGAGTTCCACTTTGAGAACT +
Preference number: 2 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGFSCPD*SSTLRT
Trigger: AGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAA...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGCTGTGCCCTCCATaGTTTGGTGATGTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHELCPP*FGDVSR
Trigger: CCTGCTGACATCACCAAACCATGGAGGGCACAGCTC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGTTCAGAGAGCGGCAGTaGGCTCTGTCGCCCTCCATG +
Preference number: 2 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGFRERQ*ALSPSM
Trigger: CATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAA...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CAA 90 bp TATTCCCGTGCTCTTGGCCCCGGAAAGGCACGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTGTCCAAAGCCATCCTGCCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: YSRALGPGKARGGCV*SREVLLSKAILPPS
Trigger: AGAAGGAGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGGCCAAGAGCACGGGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCCCTGGCTTCGGAAGCTaGACTTTTCAATGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: VQRAAVGSVALHEVVVACPGFGS*TFQWLL
Trigger: CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGG...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAAGTTGGCTCCCTCTaGAAGAGAAACCAACCCCTC +
Preference number: 2 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHEVGSL*KRNQPL
Trigger: GAGGGGTTGGTTTCTCTTGCAGAGGGAGCCAACTTC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCACATGATCGTCAGTTCTaGATAGTTTTTGAATCTTGC +
Preference number: 2 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAHDRQF*IVFESC
Trigger: GCAAGATTCAAAAACTATGCAGAACTGACGATCATG...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCACTGTTCGGTTACAGTaGGGCAAAGAATGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: VQRAAVGSVALHEVVVACTVRLQ*GKECQS
Trigger: GCTCTGGCATTCTTTGCCCCACTGTAACCGAACAGT...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CAA 90 bp AGCAGGCCGGGGATGATGTCGACGAGGAGCTGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACCTTTGTCTGCATCTTGATAGCAGCC +
Preference number: 2 (lower is better)
Translates to: SRPGMMSTRSCSKDS*VILSTTFVCILIAA
Trigger: GGCTGCTATCAAGATGCAGACAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACATCATCCCCGGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGACAAGTCTGTATGGACTaGAAAATATGCTACTGTGTA +
Preference number: 2 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGQVCMD*KICYCV
Trigger: TACACAGTAGCATATTTTTCAGTCCATACAGACTTG...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCCCTTTGTGTGTACTGTaGGGATGTCAGGTAATGCTC +
Preference number: 2 (lower is better)
Translates to: VQRAAVGSVALHEVVVACPLCVL*GCQVML
Trigger: GAGCATTACCTGACATCCTCACAGTACACACAAAGG...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGGAGCTGTGCCCTCCATaGTTTGGTGATGTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGELCPP*FGDVSR
Trigger: CCTGCTGACATCACCAAACCATGGAGGGCACAGCTC...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTGAGCTGTGCCCTCCATaGTTTGGTGATGTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFELCPP*FGDVSR
Trigger: CCTGCTGACATCACCAAACCATGGAGGGCACAGCTC...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CCCCGGAAAGGCACGTGGAGGCTGCGTGTTGAGCAGGGAGGTCTTGTTGTCCAATCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 2 (lower is better)
Translates to: PRKGTWRLRVEQGGLVVQSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...TTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CCA 90 bp GTCCTCTTTCCTCCTACAGTTGGTGCCAGGCCCTACCCTAGGTTCACGGGCTGCAGTCTGGGTCAGTCTTaGAGCCAGGGTCAAGGTTTC +
Preference number: 2 (lower is better)
Translates to: VLFPPTVGARPYPRFTGCSLGQS*SQGQGF
Trigger: GAAACCTTGACCCTGGCTCCAAGACTGACCCAGACT...GCAGCCCGTGAACCTAGGGTAGGGCCTGGCACCAACTGTAGGAGGAAAGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CAA 90 bp TTGAGCAACTCCAGCAGTGCGCCCTTCCGCTCCTCCACACGCTCGTaGTGGTTAGATAGCTCTTTCAGCAAGTCAGCCACCAGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: LSNSSSAPFRSSTRS*WLDSSFSKSATRSE
Trigger: CTCAGACCTGGTGGCTGACTTGCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGAGGAGCGGAAGGGCGCACTGCTGGAGTTGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGTATGTGCGGCCTCCTTaGATGGACTGGGCAACTGAT +
Preference number: 2 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGYVRPP*MDWATD
Trigger: ATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATA...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTACCTGCACACATGTTaGAAGCTAGTAGTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: VQRAAVGSVALHEVVVACYLHTC*KLVVSH
Trigger: ATGGCTCACTACTAGCTTTCAACATGTGTGCAGGTA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: VQRAAVGSVALHEVVVACCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGGCAAATCCCTTAAAATaGACCCCTGAGTTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTANPLK*TPEFSE
Trigger: TTCAGAGAACTCAGGGGTGCATTTTAAGGGATTTGC...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp CCCCGGAAAGGCACGTGGAGGCTGCGTGTTGAGCAGGGAGGTCTTGTTGTCCAACTGCTTCCAGGTCAGTaGTGGTACTCAAGACTCTCA +
Preference number: 2 (lower is better)
Translates to: PRKGTWRLRVEQGGLVVQLLPGQ*WYSRLS
Trigger: TGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAG...TTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTGGTGATGTCAGCAGGTaGTGCAGACACGTGCAAGTA +
Preference number: 2 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFGDVSR*CRHVQV
Trigger: TACTTGCACGTGTCTGCACCACCTGCTGACATCACC...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTCTGGCTAGAGAGCTCTaGATTCTAAGAGCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFLAREL*ILRAVP
Trigger: GGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAG...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTTCAGAGAGCGGCAGTaGGCTCTGTCGCCCTCCATG +
Preference number: 2 (lower is better)
Translates to: DSKSCALHGLVMSAGGADFRERQ*ALSPSM
Trigger: CATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCCCTCCATGGTTTGGTaGTGTCAGCAGGTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: VQTRASMALHFSVPRPCFPSMVW*CQQVVQ
Trigger: CTGCACCACCTGCTGACATCACCAAACCATGGAGGG...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGATGAGTCACCATGCCTaGCTTACCATTTGGAGGGTC +
Preference number: 2 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGMSHHA*LTIWRV
Trigger: GACCCTCCAAATGGTAAGTCAGGCATGGTGACTCAT...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTTCGGGCAGCAGTCTTaGGGTGGAGCCCAAGAGACA +
Preference number: 2 (lower is better)
Translates to: DSKSCALHGLVMSAGGADFGQQS*GGAQET
Trigger: TGTCTCTTGGGCTCCACCTCAAGACTGCTGCCCGAA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp TATCATAGTCCAGCATGCTTGGAGATAGTCCCCCATGGGAACAGTTGGTGGGTGGCTTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 2 (lower is better)
Translates to: YHSPACLEIVPHGNSWWVASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGC...CACCCACCAACTGTTCCCATGGGGGACTATCTCCAAGCATGCTGGACTATGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR TCA 90 bp ATGAGCGCTCAGAGCACACGCTGGAGGCATCACTGTTGGCATCATCATCAGAGTGGAAGAGGATCGGTCTaGCTGGGGCAGAGACACGAT +
Preference number: 2 (lower is better)
Translates to: MSAQSTRWRHHCWHHHQSGRGSV*LGQRHD
Trigger: ATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCC...ACTCTGATGATGATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGCGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR TCA 90 bp GTCCTCTTTCCTCCTACAGTTGGTGCCAGGCCCTACCCTAGGTTCACGGGCTGCGTGTTGTTGCTTGTCTaGGAAAACAGGGTCCAGACA +
Preference number: 2 (lower is better)
Translates to: VLFPPTVGARPYPRFTGCVLLLV*ENRVQT
Trigger: TGTCTGGACCCTGTTTTCTCAGACAAGCAACAACAC...GCAGCCCGTGAACCTAGGGTAGGGCCTGGCACCAACTGTAGGAGGAAAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR CCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTGTCCTTTGGGGAGGTaGAGGCAAGGCAAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: VQTRASMALHFSVPRPCFCPLGR*RQGKAA
Trigger: AGCTGCCTTGCCTTGCCTCCACCTCCCCAAAGGACA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TATCATAGTCCAGCATGCTTGGAGATAGTCCCCCATGGGAACAGTTGGTGGGTGGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: YHSPACLEIVPHGNSWWVGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...CACCCACCAACTGTTCCCATGGGGGACTATCTCCAAGCATGCTGGACTATGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR TCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTATGTGCGGCCTCCTTaGATGGACTGGGCAACTGAT +
Preference number: 2 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPYVRPP*MDWATD
Trigger: ATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATA...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp ACACGCTCGTTGTGGTTAGATAGCTCTTTCAGCAAGTCAGCCACCAGGTCTGAGCCCTCCATGGTTTGGTaGTGTCAGCAGGTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: TRSLWLDSSFSKSATRSEPSMVW*CQQVVQ
Trigger: CTGCACCACCTGCTGACATCACCAAACCATGGAGGG...CTCAGACCTGGTGGCTGACTTGCTGAAAGAGCTATCTAACCACAACGAGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTCTTTAATGCAACCATaGGAACTTTGGTGGCATTAC +
Preference number: 2 (lower is better)
Translates to: VQRAAVGSVALHEVVVACSLMQP*ELWWHY
Trigger: GTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp CCCCGGAAAGGCACGTGGAGGCTGCGTGTTGAGCAGGGAGGTCTTGTTGTCCAATATCATAGTCCAGCATaGTTGGAGATAGTCCCCCAT +
Preference number: 2 (lower is better)
Translates to: PRKGTWRLRVEQGGLVVQYHSPA*LEIVPH
Trigger: ATGGGGGACTATCTCCAAGCATGCTGGACTATGATA...TTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp TCCTTGGTGATCCTCTCCACCACCTTTGTCTGCATCTTGATAGCAGCCAGGTTGAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 2 (lower is better)
Translates to: SLVILSTTFVCILIAARLRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...CAACCTGGCTGCTATCAAGATGCAGACAAAGGTGGTGGAGAGGATCACCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTGCGGCCTCCTTGAATaGACTGGGCAACTGATGGAG +
Preference number: 2 (lower is better)
Translates to: DSKSCALHGLVMSAGGADCGLLE*TGQLME
Trigger: CTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTGCGGCCTCCTTGAATaGACTGGGCAACTGATGGAG +
Preference number: 2 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTCGLLE*TGQLME
Trigger: CTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCA...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTGAGCTGTGCCCTCCATaGTTTGGTGATGTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTELCPP*FGDVSR
Trigger: CCTGCTGACATCACCAAACCATGGAGGGCACAGCTC...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCACCCCCAAGTCTGTATaGACTGAAAAATATGCTACT +
Preference number: 2 (lower is better)
Translates to: VQRAAVGSVALHEVVVACTPKSV*TEKYAT
Trigger: AGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAAGCCCAGGCCATCTGTaGGCACCAGGTCCGCACAGC +
Preference number: 2 (lower is better)
Translates to: GDKPVALPAHMLKASSEPSPGHL*APGPHS
Trigger: GCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCT...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 2 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR CAA 90 bp GGTGAGGCTGCTCCCCCATCTCGGGACACGATATCACAATCCTTCTaGCCATCTCGTTTGATTGGCTCATTTAGATCCTCCTGGCTTCGG +
Preference number: 2 (lower is better)
Translates to: GEAAPPSRDTISQSF*PSRLIGSFRSSWLR
Trigger: CCGAAGCCAGGAGGATCTAAATGAGCCAATCAAACGAGATGGCAAGAAGGATTGTGATATCGTGTCCCGAGATGGGGGAGCAGCCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTATGTGCGGCCTCCTTaGATGGACTGGGCAACTGAT +
Preference number: 2 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTYVRPP*MDWATD
Trigger: ATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATA...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGAGCCTAGTGCAGGGTaGGAAGGATTCTCACTGATG +
Preference number: 2 (lower is better)
Translates to: VQTRASMALHFSVPRPCFEPSAG*EGFSLM
Trigger: CATCAGTGAGAATCCTTCTCACCCTGCACTAGGCTC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp ACCACCTCCTTGTGGGAGTCTTTGTGGGCTTCCAGAGTCTTCATGATCGTCAGTGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 2 (lower is better)
Translates to: TTSLWESLWASRVFMIVSVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...ACTGACGATCATGAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGAGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR GCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTTTGTCGTCTTTTTCTTaGCCAGACTGCAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFLSSFS*PDCSST
Trigger: AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAA...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGCAGCCTAGGAAAGTTTaGATGATTGCATTAAGAATT +
Preference number: 2 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTQPRKV*MIALRI
Trigger: AATTCTTAATGCAATCATGCAAACTTTCCTAGGCTG...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCGTAACCTGGCCAGGCTaGACATGGCTACAAGGCTAC +
Preference number: 2 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSVTWPG*TWLQGY
Trigger: GTAGCCTTGTAGCCATGTGCAGCCTGGCCAGGTTAC...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGAAAAATCTGTACATTTaGCATGATACACTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTKNLYI*HDTLGK
Trigger: CTTCCCAAGTGTATCATGGCAAATGTACAGATTTTT...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp ACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCACTAGCTGTGTGTGGACAGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: TTNVCSAQTGTATSCVWTDSWGS*SVFLRM
Trigger: CATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTC...TGTCCACACACAGCTAGTGGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTGCGGCCTCCTTGAATaGACTGGGCAACTGATGGAG +
Preference number: 2 (lower is better)
Translates to: YQALARELWILRAVPSMVCGLLE*TGQLME
Trigger: CTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCA...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGGTGATGTCAGCAGGTaGTGCAGACACGTGCAAGTA +
Preference number: 2 (lower is better)
Translates to: VQTRASMALHFSVPRPCFGDVSR*CRHVQV
Trigger: TACTTGCACGTGTCTGCACCACCTGCTGACATCACC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGCTGGCTAGAGAGCTCTaGATTCTAAGAGCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLLAREL*ILRAVP
Trigger: GGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAG...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATACCCCCAAGTCTGTATaGACTGAAAAATATGCTACT +
Preference number: 2 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHTPKSV*TEKYAT
Trigger: AGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCCAAGGCAGGGAAGTTaGCTCCCTCTGCAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: VQTRASMALHFSVPRPCFPRQGS*LPLQEK
Trigger: TTTCTCTTGCAGAGGGAGCCAACTTCCCTGCCTTGG...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCCAAGGCAGGGAAGTTaGCTCCCTCTGCAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: DSKSCALHGLVMSAGGADPRQGS*LPLQEK
Trigger: TTTCTCTTGCAGAGGGAGCCAACTTCCCTGCCTTGG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CTAGCCTCAGTTCAGTCTGAGCTCCTGGAATCCAAGAAACAAGTCAGTGTCTGTCCCTCCATGAGGTGGTaGTGGCATGCGAGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: LASVQSELLESKKQVSVCPSMRW*WHASLL
Trigger: GAGGAGACTCGCATGCCACCACCACCTCATGGAGGG...ACAGACACTGACTTGTTTCTTGGATTCCAGGAGCTCAGACTGAACTGAGGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCATGAGTCACCATGCCTaGCTTACCATTTGGAGGGTC +
Preference number: 2 (lower is better)
Translates to: VQTRASMALHFSVPRPCFMSHHA*LTIWRV
Trigger: GACCCTCCAAATGGTAAGTCAGGCATGGTGACTCAT...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp CTCAGAATTTCCCGTAAAACTCTCAGTGCCAGAGCTCGAATGGAATGGTCTTTGGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 2 (lower is better)
Translates to: LRISRKTLSARARMEWSLAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...CAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTCAGTCCCCAGGCCTTaGTTCCGTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: SKSCALHGLVMSAGGADTSVPRP*FRYIQY
Trigger: GTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGA...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGTTTTCTTGCCCAGACTaGAGTTCCACTTTGAGAACT +
Preference number: 2 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGFSCPD*SSTLRT
Trigger: AGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAA...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CATCTTGATAGCAGCCAGGTTGATGGGGTAGTCGGCTGTCTGGATGATTGGACAGGTGATGTCAGCAGGTaGTGCAGACACGTGCAAGTA +
Preference number: 2 (lower is better)
Translates to: HLDSSQVDGVVGCLDDWTGDVSR*CRHVQV
Trigger: TACTTGCACGTGTCTGCACCACCTGCTGACATCACC...TGTCCAATCATCCAGACAGCCGACTACCCCATCAACCTGGCTGCTATCAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp ACACGCTCGTTGTGGTTAGATAGCTCTTTCAGCAAGTCAGCCACCAGGTCTGAGCCAAGGCAGGGAAGTTaGCTCCCTCTGCAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: TRSLWLDSSFSKSATRSEPRQGS*LPLQEK
Trigger: TTTCTCTTGCAGAGGGAGCCAACTTCCCTGCCTTGG...CTCAGACCTGGTGGCTGACTTGCTGAAAGAGCTATCTAACCACAACGAGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCACTGTTCGGTTACAGTaGGGCAAAGAATGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: VQTRASMALHFSVPRPCFTVRLQ*GKECQS
Trigger: GCTCTGGCATTCTTTGCCCCACTGTAACCGAACAGT...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCATCGCCCTCCATGAGGTaGTGGTGGCATGCGAGTCTC +
Preference number: 2 (lower is better)
Translates to: GDKPVALPAHMLKASSEPSPSMR*WWHASL
Trigger: GAGACTCGCATGCCACCACCACCTCATGGAGGGCGA...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAATCGCCCTCCATGAGGTaGTGGTGGCATGCGAGTCTC +
Preference number: 2 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQSPSMR*WWHASL
Trigger: GAGACTCGCATGCCACCACCACCTCATGGAGGGCGA...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GTCAGCCACTGCTGCTTCCAGGTCAGTGCTGGTACTCAAGACTCTCATGGCGTTGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: VSHCCFQVSAGTQDSHGVEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...AACGCCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAGCAGTGGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CCA 90 bp CTAGCCTCAGTTCAGTCTGAGCTCCTGGAATCCAAGAAACAAGTCAGTGTCTGTGGCCAAGATGGAGGCTaGGAGATGGCTCTGCAGTTC +
Preference number: 2 (lower is better)
Translates to: LASVQSELLESKKQVSVCGQDGG*EMALQF
Trigger: GAACTGCAGAGCCATCTCCCAGCCTCCATCTTGGCC...ACAGACACTGACTTGTTTCTTGGATTCCAGGAGCTCAGACTGAACTGAGGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CAA 90 bp AGCCCTAGAATTCACATTAAAAAGGTGAACGCAGTAATGTGGTACTaGTCCCAGTGCTGGGGAAGTGGAGGCAGTCAGATCCCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: SPRIHIKKVNAVMWY*SQCWGSGGSQIPGL
Trigger: GAGCCCTGGGATCTGACTGCCTCCACTTCCCCAGCACTGGGACAAGTACCACATTACTGCGTTCACCTTTTTAATGTGAATTCTAGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR TCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCACCCTCCATGGTTTGGTaGTGTCAGCAGGTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: GDKPVALPAHMLKASSEPPSMVW*CQQVVQ
Trigger: CTGCACCACCTGCTGACATCACCAAACCATGGAGGG...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGTCTTTAATGCAACCATaGGAACTTTGGTGGCATTAC +
Preference number: 2 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGSLMQP*ELWWHY
Trigger: GTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGA...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCATGAGTCACCATGCCTaGCTTACCATTTGGAGGGTC +
Preference number: 2 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSMSHHA*LTIWRV
Trigger: GACCCTCCAAATGGTAAGTCAGGCATGGTGACTCAT...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp TATCATAGTCCAGCATGCTTGGAGATAGTCCCCCATGGGAACAGTTGGTGGGTGGGACAGTTAGATGTGTaGGCCACTCATCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: YHSPACLEIVPHGNSWWVGQLDV*ATHLSL
Trigger: GAGAGAGAGATGAGTGGCTCACACATCTAACTGTCC...CACCCACCAACTGTTCCCATGGGGGACTATCTCCAAGCATGCTGGACTATGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGCCCAAGAGACAGAAATaGTTGTACTCTTTCTACTCA +
Preference number: 2 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGPKRQK*LYSFYS
Trigger: TGAGTAGAAAGAGTACAATCATTTCTGTCTCTTGGG...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCATTCGGGCAGCAGTCTTaGGGTGGAGCCCAAGAGACA +
Preference number: 2 (lower is better)
Translates to: GDKPVALPAHMLKASSEPFGQQS*GGAQET
Trigger: TGTCTCTTGGGCTCCACCTCAAGACTGCTGCCCGAA...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GTCAGCCACTGCTGCTTCCAGGTCAGTGCTGGTACTCAAGACTCTCATGGCGTTGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 2 (lower is better)
Translates to: VSHCCFQVSAGTQDSHGVAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...AACGCCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAGCAGTGGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR TCA 90 bp TCCCGTAAAACTCTCAGTGCCAGAGCTCGAATGGAATGGTCTTTGTCTCCGAGAGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 2 (lower is better)
Translates to: SRKTLSARARMEWSLSPRDCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...TCTCGGAGACAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR TCA 90 bp AGAATTTCCCGTAAAACTCTCAGTGCCAGAGCTCGAATGGAATGGTCTTTGTCTGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 2 (lower is better)
Translates to: RISRKTLSARARMEWSLSAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...AGACAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTCAGTCCCCAGGCCTTaGTTCCGTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: DSKSCALHGLVMSAGGADSVPRP*FRYIQY
Trigger: GTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCAGTTACAGTGGGCTCTaGACTAGAAGAGCACATGCT +
Preference number: 2 (lower is better)
Translates to: VQTRASMALHFSVPRPCFSYSGL*TRRAHA
Trigger: AGCATGTGCTCTTCTAGTGCAGAGCCCACTGTAACT...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp ATTGCTTGGAGATCCCACACCGGTGTTACTGGAGTTCTTGAGGTGGTTATGCAGGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 2 (lower is better)
Translates to: IAWRSHTGVTGVLEVVMQGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...CTGCATAACCACCTCAAGAACTCCAGTAACACCGGTGTGGGATCTCCAAGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAATCCATGAGGTGGTGGTaGCATGCGAGTCTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQSMRWW*HASLLS
Trigger: GCTGAGGAGACTCGCATGCCACCACCACCTCATGGA...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCCCTCCATGAGGTGGTaGTGGCATGCGAGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFPSMRW*WHASLL
Trigger: GAGGAGACTCGCATGCCACCACCACCTCATGGAGGG...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TATCATAGTCCAGCATGCTTGGAGATAGTCCCCCATGGGAACAGTTGGTGGGTGAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 2 (lower is better)
Translates to: YHSPACLEIVPHGNSWWVRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...CACCCACCAACTGTTCCCATGGGGGACTATCTCCAAGCATGCTGGACTATGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR TCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTCAAGTCTGTATGGACTaGAAAATATGCTACTGTGTA +
Preference number: 2 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFQVCMD*KICYCV
Trigger: TACACAGTAGCATATTTTTCAGTCCATACAGACTTG...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp AGAATTTCCCGTAAAACTCTCAGTGCCAGAGCTCGAATGGAATGGTCTTTGTCTGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 2 (lower is better)
Translates to: RISRKTLSARARMEWSLSVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...AGACAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCTCAGTCCCCAGGCCTTaGTTCCGTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSSVPRP*FRYIQY
Trigger: GTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGA...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTTGTCGTCTTTTTCTTaGCCAGACTGCAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: VQTRASMALHFSVPRPCFLSSFS*PDCSST
Trigger: AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTGAAGTTGGCTCCCTCTaGAAGAGAAACCAACCCCTC +
Preference number: 2 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLEVGSL*KRNQPL
Trigger: GAGGGGTTGGTTTCTCTTGCAGAGGGAGCCAACTTC...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGAGGTGGTGGTGGCATaGGAGTCTCCTCAGCATTTC +
Preference number: 2 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQEVVVA*ESPQHF
Trigger: GAAATGCTGAGGAGACTCGCATGCCACCACCACCTC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGAGGTGGTGGTGGCATaGGAGTCTCCTCAGCATTTC +
Preference number: 2 (lower is better)
Translates to: GDKPVALPAHMLKASSEPEVVVA*ESPQHF
Trigger: GAAATGCTGAGGAGACTCGCATGCCACCACCACCTC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp ATGAGCGCTCAGAGCACACGCTGGAGGCATCACTGTTGGCATCATCATCAGAGTAGAGCATTTACTCTCTaGTCCCAGTCATGCTTGTCA +
Preference number: 2 (lower is better)
Translates to: MSAQSTRWRHHCWHHHQSRAFTL*SQSCLS
Trigger: TGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCT...ACTCTGATGATGATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGCGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR GCA 90 bp TCAGGACTGCAAAGCAAATGCCATTACTGTCTGGGTCACTTGTCAGTCTCAGGTCATCTGACAAGACCCTaGAGGGCATCTGAGGGTTCT +
Preference number: 2 (lower is better)
Translates to: SGLQSKCHYCLGHLSVSGHLTRP*RASEGS
Trigger: AGAACCCTCAGATGCCCTGCAGGGTCTTGTCAGATG...ACCTGAGACTGACAAGTGACCCAGACAGTAATGGCATTTGCTTTGCAGTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR CCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGAGCTGTGCCCTCCATaGTTTGGTGATGTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: GDKPVALPAHMLKASSEPELCPP*FGDVSR
Trigger: CCTGCTGACATCACCAAACCATGGAGGGCACAGCTC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCATCCATGAGGTGGTGGTaGCATGCGAGTCTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSSMRWW*HASLLS
Trigger: GCTGAGGAGACTCGCATGCCACCACCACCTCATGGA...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 2 (lower is better)
Translates to: GDKPVALPAHMLKASSEPMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR CAA 90 bp AGAAGAGAGTGCATAGCACTCACCCTTATGGAGTCTGGGTCAGTCTaGGAGCCAGGGTCAAGGTTTCCTCCTTGCTTCTCTTCTAGAAAA +
Preference number: 2 (lower is better)
Translates to: RRECIALTLMESGSV*EPGSRFPPCFSSRK
Trigger: TTTTCTAGAAGAGAAGCAAGGAGGAAACCTTGACCCTGGCTCCAAGACTGACCCAGACTCCATAAGGGTGAGTGCTATGCACTCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR TCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACTATGTGCGGCCTCCTTaGATGGACTGGGCAACTGAT +
Preference number: 2 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNYVRPP*MDWATD
Trigger: ATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATA...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGAGCCTAGTGCAGGGTaGGAAGGATTCTCACTGATG +
Preference number: 2 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQEPSAG*EGFSLM
Trigger: CATCAGTGAGAATCCTTCTCACCCTGCACTAGGCTC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp ACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCACTAGCTGTGTGTGGACAGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 2 (lower is better)
Translates to: TTNVCSAQTGTATSCVWTVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...TGTCCACACACAGCTAGTGGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR TCA 90 bp TTTACAAAATCTGTGGGGTCCATCTGTCTGGCTAGAGATTCGATGTATTTCAGGGACCGGCTGCCAGGCTaGGACTGTGAAACCACTTTG +
Preference number: 2 (lower is better)
Translates to: FTKSVGSICLARDSMYFRDRLPG*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCCTGGCAGCCGGTC...CCTGAAATACATCGAATCTCTAGCCAGACAGATGGACCCCACAGATTTTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTTTTCTTGCCCAGACTaGAGTTCCACTTTGAGAACT +
Preference number: 2 (lower is better)
Translates to: DSKSCALHGLVMSAGGADFSCPD*SSTLRT
Trigger: AGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTTTTCTTGCCCAGACTaGAGTTCCACTTTGAGAACT +
Preference number: 2 (lower is better)
Translates to: VQTRASMALHFSVPRPCFFSCPD*SSTLRT
Trigger: AGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACGAAGTTGGCTCCCTCTaGAAGAGAAACCAACCCCTC +
Preference number: 2 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNEVGSL*KRNQPL
Trigger: GAGGGGTTGGTTTCTCTTGCAGAGGGAGCCAACTTC...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAGAAGTTGGCTCCCTCTaGAAGAGAAACCAACCCCTC +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLEVGSL*KRNQPL
Trigger: GAGGGGTTGGTTTCTCTTGCAGAGGGAGCCAACTTC...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAGTAACCTGGCCAGGCTaGACATGGCTACAAGGCTAC +
Preference number: 2 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSVTWPG*TWLQGY
Trigger: GTAGCCTTGTAGCCATGTGCAGCCTGGCCAGGTTAC...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGAGCTGTGCCCTCCATaGTTTGGTGATGTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFELCPP*FGDVSR
Trigger: CCTGCTGACATCACCAAACCATGGAGGGCACAGCTC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCCCAAGGCAGGGAAGTTaGCTCCCTCTGCAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: THTEPSFSVSISHGFSPTPRQGS*LPLQEK
Trigger: TTTCTCTTGCAGAGGGAGCCAACTTCCCTGCCTTGG...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GGCAAGGCACCAAGTAACATGGTAAATTCAGGCGTGTTCAGTTCAAACAGAGAGCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 2 (lower is better)
Translates to: GKAPSNMVNSGVFSSNREPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...CTCTCTGTTTGAACTGAACACGCCTGAATTTACCATGTTACTTGGTGCCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTATGTGCGGCCTCCTTaGATGGACTGGGCAACTGAT +
Preference number: 2 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFYVRPP*MDWATD
Trigger: ATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGGACAGTTAGATGTGTaGGCCACTCATCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQGQLDV*ATHLSL
Trigger: GAGAGAGAGATGAGTGGCTCACACATCTAACTGTCC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp ATTGCTTGGAGATCCCACACCGGTGTTACTGGAGTTCTTGAGGTGGTTATGCAGTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTAGT +
Preference number: 2 (lower is better)
Translates to: IAWRSHTGVTGVLEVVMQCLSHV*TLWFCS
Trigger: ACTACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...CTGCATAACCACCTCAAGAACTCCAGTAACACCGGTGTGGGATCTCCAAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGAAGTTGGCTCCCTCTaGAAGAGAAACCAACCCCTC +
Preference number: 2 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFEVGSL*KRNQPL
Trigger: GAGGGGTTGGTTTCTCTTGCAGAGGGAGCCAACTTC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp ACCACCTCCTTGTGGGAGTCTTTGTGGGCTTCCAGAGTCTTCATGATCGTCAGTAGAACTGATGACAGATaGCCCAATGTGATACAAGCT +
Preference number: 2 (lower is better)
Translates to: TTSLWESLWASRVFMIVSRTDDR*PNVIQA
Trigger: AGCTTGTATCACATTGGGGCATCTGTCATCAGTTCT...ACTGACGATCATGAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGAGGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR GCA 90 bp TGGAGAGATCCTGTCGTCGACACAGATTTGGTACTAACTGTAGAGCCTTTAATGCTCTGGATGCAGTGCTaGCAGTGGGACTTCTTTTGG +
Preference number: 2 (lower is better)
Translates to: WRDPVVDTDLVLTVEPLMLWMQC*QWDFFW
Trigger: CCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAG...CATTAAAGGCTCTACAGTTAGTACCAAATCTGTGTCGACGACAGGATCTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CCA 90 bp AGAACTGTCAGGACATCATGTCCCATCATGAAAGTTAGGACACTCACAAAAAGGTGCGGCCTCCTTGAATaGACTGGGCAACTGATGGAG +
Preference number: 2 (lower is better)
Translates to: RTVRTSCPIMKVRTLTKRCGLLE*TGQLME
Trigger: CTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCA...CCTTTTTGTGAGTGTCCTAACTTTCATGATGGGACATGATGTCCTGACAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR CCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAGGTGATGTCAGCAGGTaGTGCAGACACGTGCAAGTA +
Preference number: 2 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSGDVSR*CRHVQV
Trigger: TACTTGCACGTGTCTGCACCACCTGCTGACATCACC...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TTTACAAAATCTGTGGGGTCCATCTGTCTGGCTAGAGATTCGATGTATTTCAGGGAGCTGTGCCCTCCATaGTTTGGTGATGTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: FTKSVGSICLARDSMYFRELCPP*FGDVSR
Trigger: CCTGCTGACATCACCAAACCATGGAGGGCACAGCTC...CCTGAAATACATCGAATCTCTAGCCAGACAGATGGACCCCACAGATTTTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCTGGCTAGAGAGCTCTaGATTCTAAGAGCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFLAREL*ILRAVP
Trigger: GGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAG...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTACCCCCAAGTCTGTATaGACTGAAAAATATGCTACT +
Preference number: 2 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTTPKSV*TEKYAT
Trigger: AGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCACCAAGGCAGGGAAGTTaGCTCCCTCTGCAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSPRQGS*LPLQEK
Trigger: TTTCTCTTGCAGAGGGAGCCAACTTCCCTGCCTTGG...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCCAAGGCAGGGAAGTTaGCTCCCTCTGCAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFPRQGS*LPLQEK
Trigger: TTTCTCTTGCAGAGGGAGCCAACTTCCCTGCCTTGG...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTTTGAATATTGTCCTTTaGGGAGGTGGAGGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLLNIVL*GGGGKA
Trigger: TGCCTTGCCTCCACCTCCCCAAAGGACAATATTCAA...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCAAGTCTGTATGGACTaGAAAATATGCTACTGTGTA +
Preference number: 2 (lower is better)
Translates to: DSKSCALHGLVMSAGGADQVCMD*KICYCV
Trigger: TACACAGTAGCATATTTTTCAGTCCATACAGACTTG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGCAAGTCTGTATGGACTaGAAAATATGCTACTGTGTA +
Preference number: 2 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLQVCMD*KICYCV
Trigger: TACACAGTAGCATATTTTTCAGTCCATACAGACTTG...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp CTTGATAGCAGCCAGGTTGATGGGGTAGTCGGCTGTCTGGATGATTGGACACAGCAAGTCTGTATGGACTaGAAAATATGCTACTGTGTA +
Preference number: 2 (lower is better)
Translates to: LDSSQVDGVVGCLDDWTQQVCMD*KICYCV
Trigger: TACACAGTAGCATATTTTTCAGTCCATACAGACTTG...CTGTGTCCAATCATCCAGACAGCCGACTACCCCATCAACCTGGCTGCTATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTGGACAGTTAGATGTGTaGGCCACTCATCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: FVCTVRMSGNALELFGYSGQLDV*ATHLSL
Trigger: GAGAGAGAGATGAGTGGCTCACACATCTAACTGTCC...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAGGACAGTTAGATGTGTaGGCCACTCATCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSGQLDV*ATHLSL
Trigger: GAGAGAGAGATGAGTGGCTCACACATCTAACTGTCC...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTTACCTGCACACATGTTaGAAGCTAGTAGTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLYLHTC*KLVVSH
Trigger: ATGGCTCACTACTAGCTTTCAACATGTGTGCAGGTA...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTTTGTCGTCTTTTTCTTaGCCAGACTGCAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLLSSFS*PDCSST
Trigger: AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAA...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp TTTACAAAATCTGTGGGGTCCATCTGTCTGGCTAGAGATTCGATGTATTTCAGGGGACTCTGGATGCAGTaGTGCCAGTGGGACTTCTTT +
Preference number: 2 (lower is better)
Translates to: FTKSVGSICLARDSMYFRGLWMQ*CQWDFF
Trigger: AAAGAAGTCCCACTGGCAGCACTGCATCCAGAGTCC...CCTGAAATACATCGAATCTCTAGCCAGACAGATGGACCCCACAGATTTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATGCGGCCTCCTTGAATaGACTGGGCAACTGATGGAG +
Preference number: 2 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLECGLLE*TGQLME
Trigger: CTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAACTGTTCGGTTACAGTaGGGCAAAGAATGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSTVRLQ*GKECQS
Trigger: GCTCTGGCATTCTTTGCCCCACTGTAACCGAACAGT...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCATTGAATATTGTCCTTTaGGGAGGTGGAGGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: GDKPVALPAHMLKASSEPLNIVL*GGGGKA
Trigger: TGCCTTGCCTCCACCTCCCCAAAGGACAATATTCAA...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CTCAGAATTTCCCGTAAAACTCTCAGTGCCAGAGCTCGAATGGAATGGTCTTTGTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: LRISRKTLSARARMEWSLLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...CAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCCAAGTCTGTATGGACTaGAAAATATGCTACTGTGTA +
Preference number: 2 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSQVCMD*KICYCV
Trigger: TACACAGTAGCATATTTTTCAGTCCATACAGACTTG...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCCAAGTCTGTATGGACTaGAAAATATGCTACTGTGTA +
Preference number: 2 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSQVCMD*KICYCV
Trigger: TACACAGTAGCATATTTTTCAGTCCATACAGACTTG...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTCAGTCCCCAGGCCTTaGTTCCGTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFSVPRP*FRYIQY
Trigger: GTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTTCAGTCCCCAGGCCTTaGTTCCGTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPSVPRP*FRYIQY
Trigger: GTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGA...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAATTGTCGTCTTTTTCTTaGCCAGACTGCAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQLSSFS*PDCSST
Trigger: AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAA...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCAGCCTAGGAAAGTTTaGATGATTGCATTAAGAATT +
Preference number: 2 (lower is better)
Translates to: VQTRASMALHFSVPRPCFQPRKV*MIALRI
Trigger: AATTCTTAATGCAATCATGCAAACTTTCCTAGGCTG...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp ACACGCTCGTTGTGGTTAGATAGCTCTTTCAGCAAGTCAGCCACCAGGTCTGAGGATGTATTTCAGGATTaGTACTTTGACCTTGAGGTT +
Preference number: 2 (lower is better)
Translates to: TRSLWLDSSFSKSATRSEDVFQD*YFDLEV
Trigger: AACCTCAAGGTCAAAGTAGCAATCCTGAAATACATC...CTCAGACCTGGTGGCTGACTTGCTGAAAGAGCTATCTAACCACAACGAGCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGGTGATGTCAGCAGGTaGTGCAGACACGTGCAAGTA +
Preference number: 2 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLGDVSR*CRHVQV
Trigger: TACTTGCACGTGTCTGCACCACCTGCTGACATCACC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTTGAATATTGTCCTTTaGGGAGGTGGAGGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFLNIVL*GGGGKA
Trigger: TGCCTTGCCTCCACCTCCCCAAAGGACAATATTCAA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CTCAGAATTTCCCGTAAAACTCTCAGTGCCAGAGCTCGAATGGAATGGTCTTTGTGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 2 (lower is better)
Translates to: LRISRKTLSARARMEWSLWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...CAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CCA 90 bp ATTGCTTGGAGATCCCACACCGGTGTTACTGGAGTTCTTGAGGTGGTTATGCAGAATTTACAAAATCTGTaGGGTCCATCTGTCTGGCTA +
Preference number: 2 (lower is better)
Translates to: IAWRSHTGVTGVLEVVMQNLQNL*GPSVWL
Trigger: TAGCCAGACAGATGGACCCCACAGATTTTGTAAATT...CTGCATAACCACCTCAAGAACTCCAGTAACACCGGTGTGGGATCTCCAAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CAA 90 bp TGGCCAGCACTTCCCGGGACACATGATATAAGTCTGGTTCCAATCTaGGCGTTTTACAGTCACCTTTTCTTTAATGCAACCATGAGAACT +
Preference number: 2 (lower is better)
Translates to: WPALPGTHDISLVPI*AFYSHLFFNATMRT
Trigger: AGTTCTCATGGTTGCATTAAAGAAAAGGTGACTGTAAAACGCCAAGATTGGAACCAGACTTATATCATGTGTCCCGGGAAGTGCTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CAA 90 bp ATATCACTTCGAGATCGCTGGAGAGATCCTGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCTTTAATGGAGAAGCAAGAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: ISLRDRWRDPVVDTD*VLTVEPLMEKQEKS
Trigger: TGACTTCTCTTGCTTCTCCATTAAAGGCTCTACAGTTAGTACCAAATCTGTGTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR TCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGGACAGTTAGATGTGTaGGCCACTCATCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLGQLDV*ATHLSL
Trigger: GAGAGAGAGATGAGTGGCTCACACATCTAACTGTCC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 2 (lower is better)
Translates to: GDKPVALPAHMLKASSEPVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAATTTTCTTGCCCAGACTaGAGTTCCACTTTGAGAACT +
Preference number: 2 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQFSCPD*SSTLRT
Trigger: AGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAA...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTTTGTCGTCTTTTTCTTaGCCAGACTGCAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: FVCTVRMSGNALELFGYSLSSFS*PDCSST
Trigger: AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAA...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTTGTCGTCTTTTTCTTaGCCAGACTGCAGTTCCACT +
Preference number: 2 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFLSSFS*PDCSST
Trigger: AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CAA 90 bp TTGGCGTTTTACAGTCACCTTTTCTTTAATGCAACCATGAGAACTTaGGTGGCATTACTGATTCTATTCCCAAGGCAGGGAAGTTGGCTC +
Preference number: 2 (lower is better)
Translates to: LAFYSHLFFNATMRT*VALLILFPRQGSWL
Trigger: GAGCCAACTTCCCTGCCTTGGGAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTGACTGTAAAACGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTATCTTTAATGCAACCATaGGAACTTTGGTGGCATTAC +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLSLMQP*ELWWHY
Trigger: GTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGA...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACTCTTTAATGCAACCATaGGAACTTTGGTGGCATTAC +
Preference number: 2 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNSLMQP*ELWWHY
Trigger: GTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGA...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCACCCAAGAGACAGAAATaGTTGTACTCTTTCTACTCA +
Preference number: 2 (lower is better)
Translates to: GDKPVALPAHMLKASSEPPKRQK*LYSFYS
Trigger: TGAGTAGAAAGAGTACAATCATTTCTGTCTCTTGGG...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp AGAATTTCCCGTAAAACTCTCAGTGCCAGAGCTCGAATGGAATGGTCTTTGTCTTCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 2 (lower is better)
Translates to: RISRKTLSARARMEWSLSSCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...AGACAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCATCCTTCTTCTCCTCTTaGGATAGAGTCTATGTAGAC +
Preference number: 2 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSSFFSS*DRVYVD
Trigger: GTCTACATAGACTCTATCTCAAGAGGAGAAGAAGGA...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR GCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCGAAGTTGGCTCCCTCTaGAAGAGAAACCAACCCCTC +
Preference number: 2 (lower is better)
Translates to: HLFFNATMRTLVALLILFEVGSL*KRNQPL
Trigger: GAGGGGTTGGTTTCTCTTGCAGAGGGAGCCAACTTC...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGCAAATCCCTTAAAATaGACCCCTGAGTTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFANPLK*TPEFSE
Trigger: TTCAGAGAACTCAGGGGTGCATTTTAAGGGATTTGC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp TTTACAAAATCTGTGGGGTCCATCTGTCTGGCTAGAGATTCGATGTATTTCAGGCAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 2 (lower is better)
Translates to: FTKSVGSICLARDSMYFRQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...CCTGAAATACATCGAATCTCTAGCCAGACAGATGGACCCCACAGATTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR GCA 90 bp ATTGCTTGGAGATCCCACACCGGTGTTACTGGAGTTCTTGAGGTGGTTATGCAGTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 2 (lower is better)
Translates to: IAWRSHTGVTGVLEVVMQSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...CTGCATAACCACCTCAAGAACTCCAGTAACACCGGTGTGGGATCTCCAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR GCA 90 bp TTTACAAAATCTGTGGGGTCCATCTGTCTGGCTAGAGATTCGATGTATTTCAGGTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 2 (lower is better)
Translates to: FTKSVGSICLARDSMYFRFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...CCTGAAATACATCGAATCTCTAGCCAGACAGATGGACCCCACAGATTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCGGTGATGTCAGCAGGTaGTGCAGACACGTGCAAGTA +
Preference number: 2 (lower is better)
Translates to: HLFFNATMRTLVALLILFGDVSR*CRHVQV
Trigger: TACTTGCACGTGTCTGCACCACCTGCTGACATCACC...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCCTGGCTAGAGAGCTCTaGATTCTAAGAGCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: HLFFNATMRTLVALLILFLAREL*ILRAVP
Trigger: GGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAG...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp GTTATGATCCTAGAAACAGCTAGTCTTGTTTCGCTGGAATTTACAAAATCTGTGGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 2 (lower is better)
Translates to: VMILETASLVSLEFTKSVECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...CACAGATTTTGTAAATTCCAGCGAAACAAGACTAGCTGTTTCTAGGATCATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR TCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCATCTTTAATGCAACCATaGGAACTTTGGTGGCATTAC +
Preference number: 2 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSSLMQP*ELWWHY
Trigger: GTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGA...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCACCCAAGAGACAGAAATaGTTGTACTCTTTCTACTCA +
Preference number: 2 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSPKRQK*LYSFYS
Trigger: TGAGTAGAAAGAGTACAATCATTTCTGTCTCTTGGG...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp AGAACTGTCAGGACATCATGTCCCATCATGAAAGTTAGGACACTCACAAAAAGGAAAGTAGACAGCACATaGGGAATAACACTGAAGGCT +
Preference number: 2 (lower is better)
Translates to: RTVRTSCPIMKVRTLTKRKVDST*GITLKA
Trigger: AGCCTTCAGTGTTATTCCTCATGTGCTGTCTACTTT...CCTTTTTGTGAGTGTCCTAACTTTCATGATGGGACATGATGTCCTGACAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR CCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAACCCCCAAGTCTGTATaGACTGAAAAATATGCTACT +
Preference number: 2 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSTPKSV*TEKYAT
Trigger: AGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCAAGTCTGTATGGACTaGAAAATATGCTACTGTGTA +
Preference number: 2 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFQVCMD*KICYCV
Trigger: TACACAGTAGCATATTTTTCAGTCCATACAGACTTG...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAAAAAATCTGTACATTTaGCATGATACACTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: GDKPVALPAHMLKASSEPKNLYI*HDTLGK
Trigger: CTTCCCAAGTGTATCATGGCAAATGTACAGATTTTT...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CCA 90 bp TTTACAAAATCTGTGGGGTCCATCTGTCTGGCTAGAGATTCGATGTATTTCAGGACCCCCAAGTCTGTATaGACTGAAAAATATGCTACT +
Preference number: 2 (lower is better)
Translates to: FTKSVGSICLARDSMYFRTPKSV*TEKYAT
Trigger: AGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT...CCTGAAATACATCGAATCTCTAGCCAGACAGATGGACCCCACAGATTTTGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR GCA 90 bp AGTAGACAGCACATGAGGAATAACACTGAAGGCTGTTATTCCTCTGGCCTGTATCAGCCTAGGAAAGTTTaGATGATTGCATTAAGAATT +
Preference number: 2 (lower is better)
Translates to: SRQHMRNNTEGCYSSGLYQPRKV*MIALRI
Trigger: AATTCTTAATGCAATCATGCAAACTTTCCTAGGCTG...ATACAGGCCAGAGGAATAACAGCCTTCAGTGTTATTCCTCATGTGCTGTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CAA 90 bp CGAATGATTAGCCTAACAGCTACAACACCAGAAGTAGCCATAATTTaGGCACTGTTCGGGATTAAATTAAAGATAGTTGGCATAATGGCT +
Preference number: 2 (lower is better)
Translates to: RMISLTATTPEVAII*ALFGIKLKIVGIMA
Trigger: AGCCATTATGCCAACTATCTTTAATTTAATCCCGAACAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGTTAGGCTAATCATTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204904.3
3UTR-3UTR CCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCACCCCCAAGTCTGTATaGACTGAAAAATATGCTACT +
Preference number: 2 (lower is better)
Translates to: HLFFNATMRTLVALLILFTPKSV*TEKYAT
Trigger: AGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR GCA 72 bp GCCATCTGTGGGCACCAGGTCCGCACAGCACGGGGGTaGACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: AICGHQVRTARG*TWRAPVQQREG
Trigger: CCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGGTGCCCACAGATGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CCA 72 bp TGTGGGCACCAGGTCCGCACAGCACGGGGGTGCACCTaGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: CGHQVRTARGCT*RAPVQQREGQL
Trigger: GAGCTGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGGTGCCCACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR GCA 72 bp CCCGACTGTCGGAGGGTGTGGAGGCGACATTGGTGGTaGTCCCCGAGCTCTGCCGTCTCGTGCGGATCCGAC +
Preference number: 3 (lower is better)
Translates to: PDCRRVWRRHWW*SPSSAVSCGSD
Trigger: GTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CAA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGCCTGCCTCTGTCTGTaGAGTGCTGGGATTAAAGGC +
Preference number: 3 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAACLCL*SAGIKG
Trigger: GCCTTTAATCCCAGCACTCAACAGACAGAGGCAGGC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR GCA 72 bp GGGAACAGTTGGTGGGTGAGGTCAGGGGGCTGGTCCTaGTGCTGGGGTGGCGGGAAGGTGTCCGGCCAATTG +
Preference number: 3 (lower is better)
Translates to: GNSWWVRSGGWS*CWGGGKVSGQL
Trigger: CAATTGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR GCA 72 bp CGACATTGGTGGTGCTCCCCGAGCTCTGCCGTCTCGTaGGGATCCGACCTAGGGACGCATAGGATCCTGGGG +
Preference number: 3 (lower is better)
Translates to: RHWWCSPSSAVS*GSDLGTHRILG
Trigger: CCCCAGGATCCTATGCGTCCCTAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 72 bp TGGCTGGCCAGGAAGCCCCAGAGATCCTCCTGTGCCTaGCTTCCCAGCGCTGGCGTTAAAGGGCATGCCACC +
Preference number: 3 (lower is better)
Translates to: WLARKPQRSSCA*LPSAGVKGHAT
Trigger: GGTGGCATGCCCTTTAACGCCAGCGCTGGGAAGGCAGGCACAGGAGGATCTCTGGGGCTTCCTGGCCAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CCA 72 bp GAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTaGTGGCATGCGAGTCTCCTCAGCATTTCGGGCAGC +
Preference number: 3 (lower is better)
Translates to: ERQWALSPSMRW*WHASLLSISGS
Trigger: GCTGCCCGAAATGCTGAGGAGACTCGCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CCA 72 bp TTGACCGGCTGCCAGGCTGAGACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGACTGTCGGAGGGTGTGG +
Preference number: 3 (lower is better)
Translates to: LTGCQAETVKPL*RDCGPDCRRVW
Trigger: CCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTCTCAGCCTGGCAGCCGGTCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 72 bp TGCCAGGCTGAGACTGTGAAACCACTTTGGCGCGACTaGGGCCCCGACTGTCGGAGGGTGTGGAGGCGACAT +
Preference number: 3 (lower is better)
Translates to: CQAETVKPLWRD*GPDCRRVWRRH
Trigger: ATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTCTCAGCCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 72 bp CCCTGCAGCAGGCCGGGGATGATGTCGACGAGGAGCTaGAGCAAGGACTCCTTGGTGATCCTCTCCACCACC +
Preference number: 3 (lower is better)
Translates to: PCSRPGMMSTRS*SKDSLVILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACATCATCCCCGGCCTGCTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CCA 72 bp CGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTaGCATGCGAGTCTCCTCAGCATTTCGGGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: RQWALSPSMRWW*HASLLSISGSS
Trigger: ACTGCTGCCCGAAATGCTGAGGAGACTCGCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGTGTGCCCTCCATGGTTaGGTGATGTCAGCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTCALHG*VMSAGG
Trigger: ACCACCTGCTGACATCACCAAACCATGGAGGGCACA...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATTGGTGGCCGATTGTTaGAGAGCATTTCTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: PHSTGVHLESAGPAEGGALVADC*RAFLSS
Trigger: AGAAGAGAGAAATGCTCTCAAACAATCGGCCACCAA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCG +
Preference number: 3 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTVRPIV*LGDPTP
Trigger: CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGAC...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR TCA 72 bp CTCCGAGAGTTTCCAGCAGCAGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGCCCAGGCTGTCCTCCC +
Preference number: 3 (lower is better)
Translates to: LREFPAAAAGWS*SAPPTRPGCPP
Trigger: GGGAGGACAGCCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCTGCTGCTGGAAACTCTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCGAGGCCAGCTCCAGGTaGTCGTCTTTTTCTTGCCCA +
Preference number: 3 (lower is better)
Translates to: VQRAAVGSVALHEVVVACEASSR*SSFSCP
Trigger: TGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR TCA 72 bp GGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATaGGGTGGTGGTGGCATGCGAGTCTCCTCAGCATTT +
Preference number: 3 (lower is better)
Translates to: GSESGSGLCRPP*GGGGMRVSSAF
Trigger: AAATGCTGAGGAGACTCGCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR TCA 72 bp TTCTATCTCACTACCTCCCCGGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCGGGACACGATATCACA +
Preference number: 3 (lower is better)
Translates to: FYLTTSPALGGR*GCSPISGHDIT
Trigger: TGTGATATCGTGTCCCGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGCCGGGGAGGTAGTGAGATAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 72 bp CTCTTGGCCCCGGAAAGGCACGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGTCCAAAGCCATCCTGC +
Preference number: 3 (lower is better)
Translates to: LLAPERHVEAAC*AGRSCCPKPSC
Trigger: GCAGGATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGGCCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 72 bp TCTCGGTGTTGTCGTAACCCTGCAGCAGGCCGGGGATaGTGTCGACGAGGAGCTGCAGCAAGGACTCCTTGG +
Preference number: 3 (lower is better)
Translates to: SRCCRNPAAGRG*CRRGAAARTPW
Trigger: CCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACATCATCCCCGGCCTGCTGCAGGGTTACGACAACACCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR GCA 72 bp GCTGTCCTCCCTGGTGATCTTGAGCAACTCCAGCAGTaGGCCCTTCCGCTCCTCCACACGCTCGTTGTGGTT +
Preference number: 3 (lower is better)
Translates to: AVLPGDLEQLQQ*ALPLLHTLVVV
Trigger: AACCACAACGAGCGTGTGGAGGAGCGGAAGGGCGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATAGACAGGAGGGGGTCTaGTCCCATCTGACCATACTC +
Preference number: 3 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHRQEGV*SHLTIL
Trigger: GAGTATGGTCAGATGGGACAAGACCCCCTCCTGTCT...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GAAGTGCTCCTCCCACACGCCCAGGCTGTCCTCCCTGGTGATCTTGAGCAACTCGTTGTTTCAAGAGGTTaGGCCAGCACTTCCCGGGAC +
Preference number: 3 (lower is better)
Translates to: EVLLPHAQAVLPGDLEQLVVSRG*ASTSRD
Trigger: GTCCCGGGAAGTGCTGGCCAAACCTCTTGAAACAAC...GAGTTGCTCAAGATCACCAGGGAGGACAGCCTGGGCGTGTGGGAGGAGCACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCA +
Preference number: 3 (lower is better)
Translates to: VQRAAVGSVALHEVVVACKVSGQ*YCLEIP
Trigger: TGGGATCTCCAAGCAATACAATTGGCCGGACACCTT...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTTGTGCCCTCCATGGTTaGGTGATGTCAGCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFCALHG*VMSAGG
Trigger: ACCACCTGCTGACATCACCAAACCATGGAGGGCACA...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGGAGGCCAGCTCCAGGTaGTCGTCTTTTTCTTGCCCA +
Preference number: 3 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGEASSR*SSFSCP
Trigger: TGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GTCCTCTTTCCTCCTACAGTTGGTGCCAGGCCCTACCCTAGGTTCACGGGCTGCGGGGGTTTCAAGGCCTaGGATAGTCAGATAGATGGG +
Preference number: 3 (lower is better)
Translates to: VLFPPTVGARPYPRFTGCGGFKA*DSQIDG
Trigger: CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCC...GCAGCCCGTGAACCTAGGGTAGGGCCTGGCACCAACTGTAGGAGGAAAGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR CAA 90 bp ATGAGCGCTCAGAGCACACGCTGGAGGCATCACTGTTGGCATCATCATCAGAGTGACTGTGAAACCACTTaGGCGCGACTGCGGCCCCGA +
Preference number: 3 (lower is better)
Translates to: MSAQSTRWRHHCWHHHQSDCETT*ARLRPR
Trigger: TCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTC...ACTCTGATGATGATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGCGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CCA 72 bp CAGTCTGCCGCAGATAATGGGGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAGAGCACACGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: QSAADNGECHHS*SHMSAQSTRWR
Trigger: CCTCCAGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTCCCCATTATCTGCGGCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CCA 72 bp GTTATATTCCCGTGCTCTTGGCCCCGGAAAGGCACGTaGAGGCTGCGTGTTGAGCAGGGAGGTCTTGTTGTC +
Preference number: 3 (lower is better)
Translates to: VIFPCSWPRKGT*RLRVEQGGLVV
Trigger: GACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGGCCAAGAGCACGGGAATATAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CCA 72 bp AGCAGTGCGCCCTTCCGCTCCTCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGCAAGTCAGCCACCAGG +
Preference number: 3 (lower is better)
Translates to: SSAPFRSSTRSL*LDSSFSKSATR
Trigger: CCTGGTGGCTGACTTGCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGAGGAGCGGAAGGGCGCACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CCA 72 bp TCTCTTTGGTCTGGAAATACCTTGGGTGAGACTGGCTaGCCAGGAAGCCCCAGAGATCCTCCTGTGCCTGCC +
Preference number: 3 (lower is better)
Translates to: SLWSGNTLGETG*PGSPRDPPVPA
Trigger: GGCAGGCACAGGAGGATCTCTGGGGCTTCCTGGCCAGCCAGTCTCACCCAAGGTATTTCCAGACCAAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR CAA 90 bp CCCCGGAAAGGCACGTGGAGGCTGCGTGTTGAGCAGGGAGGTCTTGTTGTCCAATGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 3 (lower is better)
Translates to: PRKGTWRLRVEQGGLVVQWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...TTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 72 bp ACATCCCTGACTCCTGGGGATCTTGCTCCGTTTTTCTaGGGATGGTGTTACCGGTGGGCCTCTGGAGGAACC +
Preference number: 3 (lower is better)
Translates to: TSLTPGDLAPFF*GWCYRWASGGT
Trigger: GGTTCCTCCAGAGGCCCACCGGTAACACCATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTCAGGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 72 bp AGCTGTCCTGAATGGTTAGGGCTCACAGGAGCTACCTaGTGGAGGGAGGGTTCCTGGATAGTCGGCTCCTTC +
Preference number: 3 (lower is better)
Translates to: SCPEWLGLTGAT*WREGSWIVGSF
Trigger: GAAGGAGCCGACTATCCAGGAACCCTCCCTCCATCAGGTAGCTCCTGTGAGCCCTAACCATTCAGGACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR GCA 72 bp TGGAAGAGGATCGGTCTGACTGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGTGGGACTGTAGGGCCT +
Preference number: 3 (lower is better)
Translates to: WKRIGLTGAETR*CPSSSSGTVGP
Trigger: AGGCCCTACAGTCCCACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 72 bp TGCTGGGGTGGCGGGAAGGTGTCCGGCCAATTGTATTaGTTGGAGATCCCACACCGGTGTTACTGGAGTTCT +
Preference number: 3 (lower is better)
Translates to: CWGGGKVSGQLY*LEIPHRCYWSS
Trigger: AGAACTCCAGTAACACCGGTGTGGGATCTCCAAGCAATACAATTGGCCGGACACCTTCCCGCCACCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGCTCAGTCCCCAGGCCTaGCTTCCGTTACATTCAATA +
Preference number: 3 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGLSPQA*LPLHSI
Trigger: TATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAG...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGTGCCTGACTTACCATTaGGAGGGTCAGAGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGCLTYH*EGQRSR
Trigger: TCTGCTTCTCTGACCCTCCAAATGGTAAGTCAGGCA...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR GCA 72 bp TTGCCACTAAGCAAAACACACTGGCTTTCCGTACACTaGTCTCGGTGTTGTCGTAACCCTGCAGCAGGCCGG +
Preference number: 3 (lower is better)
Translates to: LPLSKTHWLSVH*SRCCRNPAAGR
Trigger: CCGGCCTGCTGCAGGGTTACGACAACACCGAGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR GCA 72 bp AGGCACTTGCTAGGAATCCATTCTCAGGCTCACCACTaGTCACAGGGAGTGGAGCTTCCCCTGGTTCTGATG +
Preference number: 3 (lower is better)
Translates to: RHLLGIHSQAHH*SQGVELPLVLM
Trigger: CATCAGAACCAGGGGAAGCTCCACTCCCTGTGAGCAGTGGTGAGCCTGAGAATGGATTCCTAGCAAGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CCA 72 bp GGTGATGTCAGCAGGTGGTGCAGACACGTGCAAGTATaGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCC +
Preference number: 3 (lower is better)
Translates to: GDVSRWCRHVQV*LFISQSPGLAS
Trigger: GGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCACCTGCTGACATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CCA 72 bp TCGGCCGCTCTCACCACCTCCTTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATGATCGTCAGTTCTGCA +
Preference number: 3 (lower is better)
Translates to: SAALTTSLWESL*ASRVFMIVSSA
Trigger: TGCAGAACTGACGATCATGAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAGAGCGGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTGTGCCCTCCATGGTTaGGTGATGTCAGCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTCALHG*VMSAGG
Trigger: ACCACCTGCTGACATCACCAAACCATGGAGGGCACA...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTAGACAGGAGGGGGTCTaGTCCCATCTGACCATACTC +
Preference number: 3 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTRQEGV*SHLTIL
Trigger: GAGTATGGTCAGATGGGACAAGACCCCCTCCTGTCT...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp TCCTTGGTGATCCTCTCCACCACCTTTGTCTGCATCTTGATAGCAGCCAGGTTGCCCAAGGCAGGGAAGTaGGCTCCCTCTGCAAGAGAA +
Preference number: 3 (lower is better)
Translates to: SLVILSTTFVCILIAARLPKAGK*APSARE
Trigger: TTCTCTTGCAGAGGGAGCCAACTTCCCTGCCTTGGG...CAACCTGGCTGCTATCAAGATGCAGACAAAGGTGGTGGAGAGGATCACCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp CATCTTGATAGCAGCCAGGTTGATGGGGTAGTCGGCTGTCTGGATGATTGGACAACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 3 (lower is better)
Translates to: HLDSSQVDGVVGCLDDWTTALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...TGTCCAATCATCCAGACAGCCGACTACCCCATCAACCTGGCTGCTATCAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 72 bp TCTGGATGCAGTGCTGCCAGTGGGACTTCTTTTGGCTaGAAGTGGCCGGTTGAGACTCTCTTGAGAGCTGGA +
Preference number: 3 (lower is better)
Translates to: SGCSAASGTSFG*KWPVETLLRAG
Trigger: TCCAGCTCTCAAGAGAGTCTCAACCGGCCACTTTCAGCCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 72 bp CATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTaGAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: HGLVMSAGGADT*KYGSSFLSPQA
Trigger: GGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCACCTGCTGACATCACCAAACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR GCA 72 bp TTGTTTCTCGGCTACATCCCTGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATGGTGTTACCGGTGGGC +
Preference number: 3 (lower is better)
Translates to: LFLGYIPDSWGS*SVFLRMVLPVG
Trigger: GCCCACCGGTAACACCATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGAAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 72 bp CCTTCTCACAGGCTTCTTCAGAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGTACTCAAGACTCTCAT +
Preference number: 3 (lower is better)
Translates to: PSHRLLQSVSHC*FQVSAGTQDSH
Trigger: ATGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCTCTGAAGAAGCCTGTGAGAAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 72 bp TCTCCTTCTCACAGGCTTCTTCAGAGCGTCAGCCACTaGTGCTTCCAGGTCAGTGCTGGTACTCAAGACTCT +
Preference number: 3 (lower is better)
Translates to: SPSHRLLQSVSH*CFQVSAGTQDS
Trigger: AGAGTCTTGAGTACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCTCTGAAGAAGCCTGTGAGAAGGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 72 bp ACTCGACTCAGTGTTCTTTGGCTCTTCAGTAAGTTCTaGAGGCCCAGGAGCCCCTCTTTCCGTTCTGACCAG +
Preference number: 3 (lower is better)
Translates to: TRLSVLWLFSKF*RPRSPSFRSDQ
Trigger: CTGGTCAGAACGGAAAGAGGGGCTCCTGGGCCTGCAGAACTTACTGAAGAGCCAAAGAACACTGAGTCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 72 bp AAAAAGGTGAACGCAGTAATGTGGTACTTGTCCCAGTaGTGGGGAAGTGGAGGCAGTCAGATCCCAGGGCTC +
Preference number: 3 (lower is better)
Translates to: KKVNAVMWYLSQ*WGSGGSQIPGL
Trigger: GAGCCCTGGGATCTGACTGCCTCCACTTCCCCAGCACTGGGACAAGTACCACATTACTGCGTTCACCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CCA 72 bp TCCGGGAACTTGATGGGGCCTTGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGCCATCCACAGAATCTT +
Preference number: 3 (lower is better)
Translates to: SGNLMGPWMMRS*QKKACCHPQNL
Trigger: AAGATTCTGTGGATGGCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCAAGGCCCCATCAAGTTCCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CCA 72 bp CTCATGGCGTTCACAGAACCAGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCTAATCCAATCCGGTTA +
Preference number: 3 (lower is better)
Translates to: LMAFTEPGIRPD*PSPNRSNPIRL
Trigger: TAACCGGATTGGATTAGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGTTCTGTGAACGCCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CCA 72 bp CTTTCAGCAAGTCAGCCACCAGGTCTGAGTGGTCAATaGGCACATCTCGGAGCTGCTCCATGTCATCGTCAA +
Preference number: 3 (lower is better)
Translates to: LSASQPPGLSGQ*AHLGAAPCHRQ
Trigger: TTGACGATGACATGGAGCAGCTCCGAGATGTGCCCATTGACCACTCAGACCTGGTGGCTGACTTGCTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CCA 72 bp GATAGCTCTTTCAGCAAGTCAGCCACCAGGTCTGAGTaGTCAATGGGCACATCTCGGAGCTGCTCCATGTCA +
Preference number: 3 (lower is better)
Translates to: DSSFSKSATRSE*SMGTSRSCSMS
Trigger: TGACATGGAGCAGCTCCGAGATGTGCCCATTGACCACTCAGACCTGGTGGCTGACTTGCTGAAAGAGCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCAGACAGGAGGGGGTCTaGTCCCATCTGACCATACTC +
Preference number: 3 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSRQEGV*SHLTIL
Trigger: GAGTATGGTCAGATGGGACAAGACCCCCTCCTGTCT...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCAGACAGGAGGGGGTCTaGTCCCATCTGACCATACTC +
Preference number: 3 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSRQEGV*SHLTIL
Trigger: GAGTATGGTCAGATGGGACAAGACCCCCTCCTGTCT...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCGTTGTTTCAAGAGGTTaGGCCAGCACTTCCCGGGAC +
Preference number: 3 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSVVSRG*ASTSRD
Trigger: GTCCCGGGAAGTGCTGGCCAAACCTCTTGAAACAAC...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCGCCTGCCTCTGTCTGTaGAGTGCTGGGATTAAAGGC +
Preference number: 3 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSACLCL*SAGIKG
Trigger: GCCTTTAATCCCAGCACTCAACAGACAGAGGCAGGC...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGGGGGTTTCAAGGCCTaGGATAGTCAGATAGATGGG +
Preference number: 3 (lower is better)
Translates to: VQTRASMALHFSVPRPCFGGFKA*DSQIDG
Trigger: CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp ACCACCTCCTTGTGGGAGTCTTTGTGGGCTTCCAGAGTCTTCATGATCGTCAGTGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 3 (lower is better)
Translates to: TTSLWESLWASRVFMIVSEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...ACTGACGATCATGAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGAGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 72 bp CTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTGGTaGTGTCAGCAGGTGGTGCAGACACGTGCAAGTATG +
Preference number: 3 (lower is better)
Translates to: LWILRAVPSMVW*CQQVVQTRASM
Trigger: CATACTTGCACGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR TCA 72 bp GCATGCGAGTCTCCTCAGCATTTCGGGCAGCAGTCTTaGGGTGGAGCCCAAGAGACAGAAATGATTGTACTC +
Preference number: 3 (lower is better)
Translates to: ACESPQHFGQQS*GGAQETEMIVL
Trigger: GAGTACAATCATTTCTGTCTCTTGGGCTCCACCTCAAGACTGCTGCCCGAAATGCTGAGGAGACTCGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR TCA 72 bp ACTCCAAAGTGTGGTACAGGTGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCCAGTAGCACTTCCTGG +
Preference number: 3 (lower is better)
Translates to: TPKCGTGVLLLG*SDCGNPSSTSW
Trigger: CCAGGAAGTGCTACTGGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAACACCTGTACCACACTTTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 72 bp TGCTTGGAGATCCCACACCGGTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTTTGGTGGCACCATCCT +
Preference number: 3 (lower is better)
Translates to: CLEIPHRCYWSS*GGYAGVWWHHP
Trigger: AGGATGGTGCCACCAAACTCCTGCATAACCACCTCAAGAACTCCAGTAACACCGGTGTGGGATCTCCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 72 bp TCCAGACAAGCAGGGTACTTGCTCATACAGCTGTCCTaGATGGTTAGGGCTCACAGGAGCTACCTGATGGAG +
Preference number: 3 (lower is better)
Translates to: SRQAGYLLIQLS*MVRAHRSYLME
Trigger: CTCCATCAGGTAGCTCCTGTGAGCCCTAACCATTCAGGACAGCTGTATGAGCAAGTACCCTGCTTGTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 72 bp GATGGCTCTGCAGTTCATAGTGCTTGCCTCCAAGCCTaGCAACTTGAGTTCAATCCCTGGGACCCACATGGT +
Preference number: 3 (lower is better)
Translates to: DGSAVHSACLQA*QLEFNPWDPHG
Trigger: ACCATGTGGGTCCCAGGGATTGAACTCAAGTTGTCAGGCTTGGAGGCAAGCACTATGAACTGCAGAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR GCA 72 bp CTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTaGAGACACGTGCAAGTATGGCTCTTCATTTCTCAG +
Preference number: 3 (lower is better)
Translates to: LCPPWFGDVSRW*RHVQVWLFISQ
Trigger: CTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR GCA 72 bp CCTCATCTGGAACTGGAACAGGACAGCAGCTCTATCTaGAGATCTGTAGGAAGACATCTCGCCGAAAGAGCC +
Preference number: 3 (lower is better)
Translates to: PHLELEQDSSSI*RSVGRHLAERA
Trigger: GGCTCTTTCGGCGAGATGTCTTCCTACAGATCTGCAGATAGAGCTGCTGTCCTGTTCCAGTTCCAGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CCA 72 bp GAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTaGTGCAGACACGTGCAAGTATGGCTCTTCATTTCT +
Preference number: 3 (lower is better)
Translates to: ELCPPWFGDVSR*CRHVQVWLFIS
Trigger: AGAAATGAAGAGCCATACTTGCACGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCTCAGTCCCCAGGCCTaGCTTCCGTTACATTCAATA +
Preference number: 3 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTLSPQA*LPLHSI
Trigger: TATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCTCAGTCCCCAGGCCTaGCTTCCGTTACATTCAATA +
Preference number: 3 (lower is better)
Translates to: DSKSCALHGLVMSAGGADLSPQA*LPLHSI
Trigger: TATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp AAGACATCTCGCCGAAAGAGCCTGCTAGCCTCAGTTCAGTCTGAGCTCCTGGAATGCCTGACTTACCATTaGGAGGGTCAGAGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: KTSRRKSLLASVQSELLECLTYH*EGQRSR
Trigger: TCTGCTTCTCTGACCCTCCAAATGGTAAGTCAGGCA...TTCCAGGAGCTCAGACTGAACTGAGGCTAGCAGGCTCTTTCGGCGAGATGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR CAA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCCTCAGTCCCCAGGCCTaGCTTCCGTTACATTCAATA +
Preference number: 3 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSLSPQA*LPLHSI
Trigger: TATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAG...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCAGGGTCTAGGTGCTTaGAATATTGTCCTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: VQTRASMALHFSVPRPCFQGLGA*NIVLWG
Trigger: TCCCCAAAGGACAATATTCAAAGCACCTAGACCCTG...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCAGGGTCTAGGTGCTTaGAATATTGTCCTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: DSKSCALHGLVMSAGGADQGLGA*NIVLWG
Trigger: TCCCCAAAGGACAATATTCAAAGCACCTAGACCCTG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp AGCAGCCAGGTTGATGGGGTAGTCGGCTGTCTGGATGATTGGACACAGCACTTTGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 3 (lower is better)
Translates to: SSQVDGVVGCLDDWTQHFVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...AAAGTGCTGTGTCCAATCATCCAGACAGCCGACTACCCCATCAACCTGGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CAA 90 bp TCCTTGGTGATCCTCTCCACCACCTTTGTCTGCATCTTGATAGCAGCCAGGTTGCTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 3 (lower is better)
Translates to: SLVILSTTFVCILIAARLLEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...CAACCTGGCTGCTATCAAGATGCAGACAAAGGTGGTGGAGAGGATCACCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 72 bp ACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTaGACTATCTTGGTGGCCGATTGTTTGAGAGCATTT +
Preference number: 3 (lower is better)
Translates to: TTPNLGAQGPCV*TILVADCLRAF
Trigger: AAATGCTCTCAAACAATCGGCCACCAAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR TCA 72 bp GAGAGTTTAAAGGCCCCGTCCAGAAGACGCAAGTGTTaGAAGAAGTTATCGTACTCAGCAGCCCCAGCCAAG +
Preference number: 3 (lower is better)
Translates to: ESLKAPSRRRKC*KKLSYSAAPAK
Trigger: CTTGGCTGGGGCTGCTGAGTACGATAACTTCTTTCAACACTTGCGTCTTCTGGACGGGGCCTTTAAACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 72 bp CTGTCCGAGTTCTTCAAGTGGGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTGTGGTACAGGTGTTCT +
Preference number: 3 (lower is better)
Translates to: LSEFFKWDCRAF*YEDSKVWYRCS
Trigger: AGAACACCTGTACCACACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTCCCACTTGAAGAACTCGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR GCA 72 bp GTTCTGGGTGCTGTGAAGAGTCCTTCAGGGTCTAGGTaGTTTGAATATTGTCCTTTGGGGAGGTGGAGGCAA +
Preference number: 3 (lower is better)
Translates to: VLGAVKSPSGSR*FEYCPLGRWRQ
Trigger: TTGCCTCCACCTCCCCAAAGGACAATATTCAAAGCACCTAGACCCTGAAGGACTCTTCACAGCACCCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR GCA 72 bp CTGATACGAGGACTCCAAAGTGTGGTACAGGTGTTCTaGTTCTCGGCTGAAGTGACTGTGGAAACCCCAGTA +
Preference number: 3 (lower is better)
Translates to: LIRGLQSVVQVF*FSAEVTVETPV
Trigger: TACTGGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAACACCTGTACCACACTTTGGAGTCCTCGTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CAA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAATGTGCCCTCCATGGTTaGGTGATGTCAGCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQCALHG*VMSAGG
Trigger: ACCACCTGCTGACATCACCAAACCATGGAGGGCACA...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAAGACAGGAGGGGGTCTaGTCCCATCTGACCATACTC +
Preference number: 3 (lower is better)
Translates to: GDKPVALPAHMLKASSEPRQEGV*SHLTIL
Trigger: GAGTATGGTCAGATGGGACAAGACCCCCTCCTGTCT...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTCCCAAGGCAGGGAAGTaGGCTCCCTCTGCAAGAGAA +
Preference number: 3 (lower is better)
Translates to: FVCTVRMSGNALELFGYSPKAGK*APSARE
Trigger: TTCTCTTGCAGAGGGAGCCAACTTCCCTGCCTTGGG...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp TATCATAGTCCAGCATGCTTGGAGATAGTCCCCCATGGGAACAGTTGGTGGGTGTGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 3 (lower is better)
Translates to: YHSPACLEIVPHGNSWWVCSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...CACCCACCAACTGTTCCCATGGGGGACTATCTCCAAGCATGCTGGACTATGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR-3UTR CAA 90 bp ACACGCTCGTTGTGGTTAGATAGCTCTTTCAGCAAGTCAGCCACCAGGTCTGAGAGAGATGAGCACAATTaGTGCTGCCTTTCTCACGTC +
Preference number: 3 (lower is better)
Translates to: TRSLWLDSSFSKSATRSERDEHN*CCLSHV
Trigger: GACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCT...CTCAGACCTGGTGGCTGACTTGCTGAAAGAGCTATCTAACCACAACGAGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 72 bp AAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTaGTGGAGCTTCTCAGAGGCACCACCAATGTGTGTT +
Preference number: 3 (lower is better)
Translates to: KLCAASLNGLGN*WSFSEAPPMCV
Trigger: AACACACATTGGTGGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
ENSMUST00000191823.6
ENSMUST00000204325.2
3UTR TCA 72 bp CTTTCCGTTCTGACCAGTTGGAACTGGCACAATGGTTaGGAACCTCTGCTACATCTTCAGTCTGCCGCAGAT +
Preference number: 3 (lower is better)
Translates to: LSVLTSWNWHNG*EPLLHLQSAAD
Trigger: ATCTGCGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 72 bp ACACTGCTTCCTTCAGAGCCGTCTTGTCATAGGTGTTaGTGGTGTCGGAGTAGGGATACGGGTTATATTCCC +
Preference number: 3 (lower is better)
Translates to: TLLPSEPSCHRC*WCRSRDTGYIP
Trigger: GGGAATATAACCCGTATCCCTACTCCGACACCATCAACACCTATGACAAGACGGCTCTGAAGGAAGCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 72 bp AAAGAGGTCTCTGTCTCAGATAGGATAGTGGCCATCTaGCAAGACCCTGCAGGGCATCTGAGGGTTCTCATA +
Preference number: 3 (lower is better)
Translates to: KEVSVSDRIVAI*QDPAGHLRVLI
Trigger: TATGAGAACCCTCAGATGCCCTGCAGGGTCTTGTCAGATGGCCACTATCCTATCTGAGACAGAGACCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 72 bp GTTCAATCCCTGGGACCCACATGGTGGAAAGAGAACTaGCTCCCACAAGTGTTCTCTGACTTCTACATGCAC +
Preference number: 3 (lower is better)
Translates to: VQSLGPTWWKEN*LPQVFSDFYMH
Trigger: GTGCATGTAGAAGTCAGAGAACACTTGTGGGAGTCAGTTCTCTTTCCACCATGTGGGTCCCAGGGATTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 72 bp CGACCTTTTACATGGCTTCTGGGCACTGAACTTGGGTaGTGCCAGCTGAGCTATCTCCTCAGCTTATTCACT +
Preference number: 3 (lower is better)
Translates to: RPFTWLLGTELG*CQLSYLLSLFT
Trigger: AGTGAATAAGCTGAGGAGATAGCTCAGCTGGCATCACCCAAGTTCAGTGCCCAGAAGCCATGTAAAAGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR GCA 72 bp TGTCTGAGAAAACAGGGTCCAGACAAGCAGGGTACTTaGTCATACAGCTGTCCTGAATGGTTAGGGCTCACA +
Preference number: 3 (lower is better)
Translates to: CLRKQGPDKQGT*SYSCPEWLGLT
Trigger: TGTGAGCCCTAACCATTCAGGACAGCTGTATGAGCAAGTACCCTGCTTGTCTGGACCCTGTTTTCTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CCA 72 bp CGAGTCTCCTCAGCATTTCGGGCAGCAGTCTTGAGGTaGAGCCCAAGAGACAGAAATGATTGTACTCTTTCT +
Preference number: 3 (lower is better)
Translates to: RVSSAFRAAVLR*SPRDRNDCTLS
Trigger: AGAAAGAGTACAATCATTTCTGTCTCTTGGGCTCCACCTCAAGACTGCTGCCCGAAATGCTGAGGAGACTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCATGTGCCCTCCATGGTTaGGTGATGTCAGCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSCALHG*VMSAGG
Trigger: ACCACCTGCTGACATCACCAAACCATGGAGGGCACA...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTTGTGCCCTCCATGGTTaGGTGATGTCAGCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: FVCTVRMSGNALELFGYSCALHG*VMSAGG
Trigger: ACCACCTGCTGACATCACCAAACCATGGAGGGCACA...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGAGGCCAGCTCCAGGTaGTCGTCTTTTTCTTGCCCA +
Preference number: 3 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFEASSR*SSFSCP
Trigger: TGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTTGCCTGACTTACCATTaGGAGGGTCAGAGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLCLTYH*EGQRSR
Trigger: TCTGCTTCTCTGACCCTCCAAATGGTAAGTCAGGCA...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGCCTGCCTCTGTCTGTaGAGTGCTGGGATTAAAGGC +
Preference number: 3 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFACLCL*SAGIKG
Trigger: GCCTTTAATCCCAGCACTCAACAGACAGAGGCAGGC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp ACACGCTCGTTGTGGTTAGATAGCTCTTTCAGCAAGTCAGCCACCAGGTCTGAGCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 3 (lower is better)
Translates to: TRSLWLDSSFSKSATRSEHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...CTCAGACCTGGTGGCTGACTTGCTGAAAGAGCTATCTAACCACAACGAGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 72 bp GGGACACGATATCACAATCCTTCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCTCCTGGCTTCGGAAGC +
Preference number: 3 (lower is better)
Translates to: GTRYHNPSCHLV*LAHLDPPGFGS
Trigger: GCTTCCGAAGCCAGGAGGATCTAAATGAGCCAATCAAACGAGATGGCAAGAAGGATTGTGATATCGTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 72 bp ACCACTGCTCACAGGGAGTGGAGCTTCCCCTGGTTCTaGTGTATCAAGGACTCAAATACTTCAGCAACTACA +
Preference number: 3 (lower is better)
Translates to: TTAHREWSFPWF*CIKDSNTSATT
Trigger: TGTAGTTGCTGAAGTATTTGAGTCCTTGATACATCAGAACCAGGGGAAGCTCCACTCCCTGTGAGCAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR GCA 72 bp GCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTaGAGTTCCACTTTGAGAACTCTAAGATACACCCTA +
Preference number: 3 (lower is better)
Translates to: ASSRLSSFSCPD*SSTLRTLRYTL
Trigger: TAGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR GCA 72 bp GCCTCTGCTCTCAACCCTGGTAGTTACAGTGGGCTCTaGACTAGAAGAGCACATGCTTTTCGAAAACTAACA +
Preference number: 3 (lower is better)
Translates to: ASALNPGSYSGL*TRRAHAFRKLT
Trigger: TGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTAACTACCAGGGTTGAGAGCAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CCA 72 bp GAATTTCCCGTAAAACTCTCAGTGCCAGAGCTCGAATaGAATGGTCTTTGTCTCCGAGAGTTTCCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: EFPVKLSVPELE*NGLCLREFPAA
Trigger: TGCTGCTGGAAACTCTCGGAGACAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CCA 72 bp CTGAAATATATACTCTTAAAGGGCCAAGATGGAGGCTaGGAGATGGCTCTGCAGTTCATAGTGCTTGCCTCC +
Preference number: 3 (lower is better)
Translates to: LKYILLKGQDGG*EMALQFIVLAS
Trigger: GGAGGCAAGCACTATGAACTGCAGAGCCATCTCCCAGCCTCCATCTTGGCCCTTTAAGAGTATATATTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR CAA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAACTCAGTCCCCAGGCCTaGCTTCCGTTACATTCAATA +
Preference number: 3 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQLSPQA*LPLHSI
Trigger: TATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAG...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTATGCCTGACTTACCATTaGGAGGGTCAGAGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLCLTYH*EGQRSR
Trigger: TCTGCTTCTCTGACCCTCCAAATGGTAAGTCAGGCA...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTCAGGGTCTAGGTGCTTaGAATATTGTCCTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLQGLGA*NIVLWG
Trigger: TCCCCAAAGGACAATATTCAAAGCACCTAGACCCTG...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp CTCAGAATTTCCCGTAAAACTCTCAGTGCCAGAGCTCGAATGGAATGGTCTTTGTGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 3 (lower is better)
Translates to: LRISRKTLSARARMEWSLWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...CAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTTTGAATATTGTCCTTaGGGGAGGTGGAGGCAAGGC +
Preference number: 3 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFFEYCP*GRWRQG
Trigger: GCCTTGCCTCCACCTCCCCAAAGGACAATATTCAAA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAACAGGGTCTAGGTGCTTaGAATATTGTCCTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQQGLGA*NIVLWG
Trigger: TCCCCAAAGGACAATATTCAAAGCACCTAGACCCTG...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp CATCTTGATAGCAGCCAGGTTGATGGGGTAGTCGGCTGTCTGGATGATTGGACACTTGAGGTTTGGAGTTaGAGTCTGATCCACAATAAA +
Preference number: 3 (lower is better)
Translates to: HLDSSQVDGVVGCLDDWTLEVWS*SLIHNK
Trigger: TTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG...TGTCCAATCATCCAGACAGCCGACTACCCCATCAACCTGGCTGCTATCAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 72 bp TTATATATAAGTTCAGCAGCTTCATCTTGCTCCCCGTaGGCTGTGCGAGGTGAGGTTTCAGATCTTCTCCGA +
Preference number: 3 (lower is better)
Translates to: LYISSAASSCSP*AVRGEVSDLLR
Trigger: TCGGAGAAGATCTGAAACCTCACCTCGCACAGCTCACGGGGAGCAAGATGAAGCTGCTGAACTTATATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 72 bp AGCCTACTTGGTGAAATCCAGATCAGTGAGAGACCCTaGCTCAATCAAACACACACACACACACACACACAC +
Preference number: 3 (lower is better)
Translates to: SLLGEIQISERP*LNQTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTTTGATTGAGTCAGGGTCTCTCACTGATCTGGATTTCACCAAGTAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR GCA 72 bp GGTTTCCTCCTTGCTTCTCTTCTAGAAAAGTGTTGTTaGTTGTCTGAGAAAACAGGGTCCAGACAAGCAGGG +
Preference number: 3 (lower is better)
Translates to: GFLLASLLEKCC*LSEKTGSRQAG
Trigger: CCCTGCTTGTCTGGACCCTGTTTTCTCAGACAAGCAACAACACTTTTCTAGAAGAGAAGCAAGGAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR GCA 72 bp AGAACTGACTCCCACAAGTGTTCTCTGACTTCTACATaGACACAGACACAAACACAGGCAGACAGACAGACA +
Preference number: 3 (lower is better)
Translates to: RTDSHKCSLTST*TQTQTQADRQT
Trigger: TGTCTGTCTGTCTGCCTGTGTTTGTGTCTGTGTGCATGTAGAAGTCAGAGAACACTTGTGGGAGTCAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CCA 72 bp TTGAGGTGGTTATGCAGGAGTTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCACCAAGTAACATGGTA +
Preference number: 3 (lower is better)
Translates to: LRWLCRSLVAPS*NVFGKAPSNMV
Trigger: TACCATGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAAACTCCTGCATAACCACCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CCA 72 bp CCTAGAATTCACATTAAAAAGGTGAACGCAGTAATGTaGTACTTGTCCCAGTGCTGGGGAAGTGGAGGCAGT +
Preference number: 3 (lower is better)
Translates to: PRIHIKKVNAVM*YLSQCWGSGGS
Trigger: ACTGCCTCCACTTCCCCAGCACTGGGACAAGTACCACATTACTGCGTTCACCTTTTTAATGTGAATTCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR CAA 90 bp TTTACAAAATCTGTGGGGTCCATCTGTCTGGCTAGAGATTCGATGTATTTCAGGTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 3 (lower is better)
Translates to: FTKSVGSICLARDSMYFRFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...CCTGAAATACATCGAATCTCTAGCCAGACAGATGGACCCCACAGATTTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 72 bp GACCATGCGTGTGAACTATCTTGGTGGCCGATTGTTTaGGAGCATTTCTCTCTTCTGAACGTTGTTAGCAGT +
Preference number: 3 (lower is better)
Translates to: DHACELSWWPIV*EHFSLLNVVSS
Trigger: ACTGCTAACAACGTTCAGAAGAGAGAAATGCTCTCAAACAATCGGCCACCAAGATAGTTCACACGCATGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR TCA 72 bp AAACTCTCTTGCTGTGAGGGTCGGCAAACATTCGGGTaGAAATCTCACACAGTCTCTTCAATTCTACTCGAC +
Preference number: 3 (lower is better)
Translates to: KLSCCEGRQTFG*KSHTVSSILLD
Trigger: GTCGAGTAGAATTGAAGAGACTGTGTGAGATTTTCACCCGAATGTTTGCCGACCCTCACAGCAAGAGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR TCA 72 bp GCCATTACTGTCTGGGTCACTTGTCAGTCTCAGGTTTaGCCCTTTAATATCACAAAGAGGTCTCTGTCTCAG +
Preference number: 3 (lower is better)
Translates to: AITVWVTCQSQV*PFNITKRSLSQ
Trigger: CTGAGACAGAGACCTCTTTGTGATATTAAAGGGTCAAACCTGAGACTGACAAGTGACCCAGACAGTAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 72 bp TCAGTTCTATCTGTACGTAGGTTCTGGGGATCACACTaGGGTTGTCAGGACTGCAAAGCAAATGCCATTACT +
Preference number: 3 (lower is better)
Translates to: SVLSVRRFWGSH*GCQDCKANAIT
Trigger: AGTAATGGCATTTGCTTTGCAGTCCTGACAACCTCAGTGTGATCCCCAGAACCTACGTACAGATAGAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 72 bp CCTTGCTTCTCTTCTAGAAAAGTGTTGTTGCTTGTCTaGGAAAACAGGGTCCAGACAAGCAGGGTACTTGCT +
Preference number: 3 (lower is better)
Translates to: PCFSSRKVLLLV*ENRVQTSRVLA
Trigger: AGCAAGTACCCTGCTTGTCTGGACCCTGTTTTCTCAGACAAGCAACAACACTTTTCTAGAAGAGAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CCA 72 bp AAAGCCACTGAAATATATACTCTTAAAGGGCCAAGATaGAGGCTGGGAGATGGCTCTGCAGTTCATAGTGCT +
Preference number: 3 (lower is better)
Translates to: KATEIYTLKGPR*RLGDGSAVHSA
Trigger: AGCACTATGAACTGCAGAGCCATCTCCCAGCCTCCATCTTGGCCCTTTAAGAGTATATATTTCAGTGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR-3UTR CAA 90 bp CTCAGAATTTCCCGTAAAACTCTCAGTGCCAGAGCTCGAATGGAATGGTCTTTGATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 3 (lower is better)
Translates to: LRISRKTLSARARMEWSLISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...CAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR TCA 72 bp ATGATTGTACTCTTTCTACTCAGACTGACATTCATGTaGCATTCGGGGCTAGCCCTTTGTGTGTACTGTGAG +
Preference number: 3 (lower is better)
Translates to: MIVLFLLRLTFM*HSGLALCVYCE
Trigger: CTCACAGTACACACAAAGGGCTAGCCCCGAATGTCACATGAATGTCAGTCTGAGTAGAAAGAGTACAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR TCA 72 bp TCAGTTTCAGAGATGGCTTCTATACCACCACAGTGGTaGTGGTTGAGCAGAGTGAACTTAAAGCCACTGAAA +
Preference number: 3 (lower is better)
Translates to: SVSEMASIPPQW*WLSRVNLKPLK
Trigger: TTTCAGTGGCTTTAAGTTCACTCTGCTCAACCATCACCACTGTGGTGGTATAGAAGCCATCTCTGAAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 72 bp ACTGTGGAAGAACTGTCAGGACATCATGTCCCATCATaGAAGTTAGGACACTCACAAAAAGGTGAAACCCTG +
Preference number: 3 (lower is better)
Translates to: TVEELSGHHVPS*KLGHSQKGETL
Trigger: CAGGGTTTCACCTTTTTGTGAGTGTCCTAACTTTCATGATGGGACATGATGTCCTGACAGTTCTTCCACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 72 bp CTAGACTGGGGTCCATGCAGGTGTTATTCAGTCTTATaGATGAAAGGAATCCTGACACTTGCTATACTGTGG +
Preference number: 3 (lower is better)
Translates to: LDWGPCRCYSVL*MKGILTLAILW
Trigger: CCACAGTATAGCAAGTGTCAGGATTCCTTTCATTCATAAGACTGAATAACACCTGCATGGACCCCAGTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 72 bp CAGTGGCATTCTAGATTCTGGACCTTAGAATGCTCATaGAGGTTCACTGAGAAACAGACTAGCATCTCAGCA +
Preference number: 3 (lower is better)
Translates to: QWHSRFWTLECS*RFTEKQTSISA
Trigger: TGCTGAGATGCTAGTCTGTTTCTCAGTGAACCTTCATGAGCATTCTAAGGTCCAGAATCTAGAATGCCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR GCA 72 bp GCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTaGTTCCGTTACATTCAATACCAGCAAAATTCTACA +
Preference number: 3 (lower is better)
Translates to: ASMALHFSVPRP*FRYIQYQQNST
Trigger: TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CCA 72 bp CCTGGACCTATATGGTTCAAGATGGCATTGACCTTATaGAGAGAGAAAACCTCCAAGATTAAGGTGTGTCTG +
Preference number: 3 (lower is better)
Translates to: PGPIWFKMALTL*REKTSKIKVCL
Trigger: CAGACACACCTTAATCTTGGAGGTTTTCTCTCTCCATAAGGTCAATGCCATCTTGAACCATATAGGTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 72 bp CTGGAGTCAGTAATAGTGGATGGTTGTTTCACTAGATaGGTCAGTTTCAGAGATGGCTTCTATACCACCACA +
Preference number: 3 (lower is better)
Translates to: LESVIVDGCFTR*VSFRDGFYTTT
Trigger: TGTGGTGGTATAGAAGCCATCTCTGAAACTGACTCATCTAGTGAAACAACCATCCACTATTACTGACTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR GCA 72 bp ATGGATGTGAAGGTGGTGTTCCTCAGGAATGATACTTaGCTTATTTTTGTGACAGGGTTTCTCTTTGGTCTG +
Preference number: 3 (lower is better)
Translates to: MDVKVVFLRNDT*LIFVTGFLFGL
Trigger: CAGACCAAAGAGAAACCCTGTCACAAAAATAAGGCAAGTATCATTCCTGAGGAACACCACCTTCACATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 72 bp TTCTTTCTCCTGGACCTATATGGTTCAAGATGGCATTaGCCTTATGGAGAGAGAAAACCTCCAAGATTAAGG +
Preference number: 3 (lower is better)
Translates to: FFLLDLYGSRWH*PYGERKPPRLR
Trigger: CCTTAATCTTGGAGGTTTTCTCTCTCCATAAGGTCAATGCCATCTTGAACCATATAGGTCCAGGAGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 72 bp CTCCTCAGCTTATTCACTTCACATTCAATGTGGTGTTaGGTTAGTCGTTGCCATAGTTACCCTATTACACCA +
Preference number: 3 (lower is better)
Translates to: LLSLFTSHSMWC*VSRCHSYPITP
Trigger: TGGTGTAATAGGGTAACTATGGCAACGACTAACTCAACACCACATTGAATGTGAAGTGAATAAGCTGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CCA 72 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTaGTCCTGCTATGTTCTGAGCCCAAGTCCATCAATA +
Preference number: 3 (lower is better)
Translates to: DRSFCVLTESKV*SCYVLSPSPSI
Trigger: TATTGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCACCTCACTATCTCTTTTaGATTGTTTTTCTAGACAGG +
Preference number: 3 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSPHYLF*IVFLDR
Trigger: CCTGTCTAGAAAAACAATCAAAAAGAGATAGTGAGG...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR-3UTR CAA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGCCTCACTATCTCTTTTaGATTGTTTTTCTAGACAGG +
Preference number: 3 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLPHYLF*IVFLDR
Trigger: CCTGTCTAGAAAAACAATCAAAAAGAGATAGTGAGG...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR GCA 72 bp AGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTaGTATGTTCTGAGCCCAAGTCCATCAATAATAGCA +
Preference number: 3 (lower is better)
Translates to: SFCVLTESKVWS*YVLSPSPSIIA
Trigger: TGCTATTATTGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CCA 72 bp TATCATGCCAGGTCTTTCTTTTCTTTTTCTTTCTCCTaGACCTATATGGTTCAAGATGGCATTGACCTTATG +
Preference number: 3 (lower is better)
Translates to: YHARSFFSFSFS*TYMVQDGIDLM
Trigger: CATAAGGTCAATGCCATCTTGAACCATATAGGTCCAGGAGAAAGAAAAAGAAAAGAAAGACCTGGCATGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR TCA 72 bp AGAACAAACACACACACACACACTTTGAAAGTTCCATaGTGGCGAATGTTAAACATTTTAAAGCATGACTTT +
Preference number: 3 (lower is better)
Translates to: RTNTHTHTLKVP*WRMLNILKHDF
Trigger: AAAGTCATGCTTTAAAATGTTTAACATTCGCCATCATGGAACTTTCAAAGTGTGTGTGTGTGTGTTTGTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR GCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGASWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGATCAGGGGGCTGGTCCTaGTGCTGGGGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGSGGWS*CWGGGK
Trigger: CTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGA...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
3UTR CAA 72 bp CTGCGGCCCCGACTGTCGGAGGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTCTGCCGTCTCGTGCGG +
Preference number: 4 (lower is better)
Translates to: LRPRLSEGVEAT*VVLPELCRLVR
Trigger: CCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
CDS-3UTR TCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGTGCTGCTGCAGAGCTaGAGGCGGGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGVLLQS*RRGILR
Trigger: CCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCAC...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGATCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGSWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGGCTTGTATCGCGGCTaGTCTCACGGCTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAGLYRG*SHGWYR
Trigger: GCGATACCAGCCGTGAGAGCAGCCGCGATACAAGCC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGADCRRV*RRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGAGAGTAAGAGCGCCTaGGAGTCTTGTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAESKSA*ESCGRE
Trigger: CTCCCTCCCACAAGACTCTCAGGCGCTCTTACTCTC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGACCGGCTGCCAGGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGADRLPG*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCCTGGCAGCCGGTC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000189262.7
CDS-3UTR CCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAGIRPD*PSPNRS
Trigger: AGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000188710.7
ENSMUST00000189262.7
CDS-3UTR TCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHALGGR*GCSPIS
Trigger: CGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAATGTCGACGAGGAGCTaGAGCAAGGACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAMSTRS*SKDSLV
Trigger: CACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACAT...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGACCGATCGAGTGGTGTaGAGCCCCGAGCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTTDRVV*SPEQGL
Trigger: CAAGCCCTGCTCGGGGCTTCACACCACTCGATCGGT...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGACCAGGGATTCGTCCTaGCTGGCCCAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTTRDSS*LAQPKP
Trigger: CGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGT...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGACCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGATGTAGAGCCTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGCRASG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGAGATAGTCCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGGDSPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGACTATCTCC...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGACTCACCACCTCCTTGTaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAG...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGDCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGTGCTGCTGCAGAGCTaGAGGCGGGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHVLLQS*RRGILR
Trigger: CCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCAC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCACCTGGCTTCGGAAGCTaGACTTTTCAATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAPGFGS*TFQWLL
Trigger: CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGG...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATTGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATCACAGGCTTCTTCTTaGTCCTGGCGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGASQASS*SWRLLT
Trigger: TGTTAGGAGACGCCAGGAGCAAGAAGAAGCCTGTGA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000178710.8
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGARRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTTVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGGAGAGTAAGAGCGCCTaGGAGTCTTGTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTESKSA*ESCGRE
Trigger: CTCCCTCCCACAAGACTCTCAGGCGCTCTTACTCTC...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAALGGR*GCSPIS
Trigger: CGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGALGGR*GCSPIS
Trigger: CGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTALGGR*GCSPIS
Trigger: CGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACALNRS*SLVTSA
Trigger: GGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGC...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATTCTTGAGGTGGTTATaGAGGAGTTTGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAFLRWL*RSLVAP
Trigger: TGGTGCCACCAAACTCCTGCATAACCACCTCAAGAA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATGTCCAAAGCCATCCTaGCTCCTTCTATCTCACTAC +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGACPKPS*LLLSHY
Trigger: GTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGATGGCTTTCCGTACACTaGTCTCGGTGTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGWLSVH*SRCCRN
Trigger: GTTACGACAACACCGAGAGCAGTGTACGGAAAGCCA...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGACCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGGTCCTGCTGCTGGGGTaGCGGGAAGGTGTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGVLLLG*REGVRP
Trigger: TGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGAC...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCCGCCTGAGAGTCTTGTaGGAGGGAGCGGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACRLRVL*EGAVGM
Trigger: CATTCCCACCGCTCCCTCCCACAAGACTCTCAGGCG...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGALWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGACTGAGAAATAGTCTATaGGTTCCTGGCCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGLRNSL*VPGQPA
Trigger: TGCAGGTTGGCCAGGAACTCATAGACTATTTCTCAG...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCGGAAGAGGATCGGTCTaGCTGGGGCAGAGACACGAT +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACGRGSV*LGQRHD
Trigger: ATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCC...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGACYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTALGGR*GCSPIS
Trigger: CGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCACTTCCAGAGTCTTCATaGTCGTCAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGALPESS*SSVLHS
Trigger: ACTATGCAGAACTGACGATCATGAAGACTCTGGAAG...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCAGTTCCTGGCCAACCTaGAGCCGCTTTCCCACATCC +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACSSWPT*SRFPTS
Trigger: GGATGTGGGAAAGCGGCTGCAGGTTGGCCAGGAACT...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTTGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTTCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFSWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGTCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGSWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTCAGGGGGCTGGTCCTaGTGCTGGGGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSGGWS*CWGGGK
Trigger: CTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTCAGGGGGCTGGTCCTaGTGCTGGGGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTASGGWS*CWGGGK
Trigger: CTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCG +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHGIRPD*PSPNRS
Trigger: CGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGTCCTGCTGCTGGGGTaGCGGGAAGGTGTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAVLLLG*REGVRP
Trigger: TGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGAC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGTCCTGCTGCTGGGGTaGCGGGAAGGTGTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTVLLLG*REGVRP
Trigger: TGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGAC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGATTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGLWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGCTCACCACCTCCTTGTaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAG...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGTGCTGCTGCAGAGCTaGAGGCGGGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAVLLQS*RRGILR
Trigger: CCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCAC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCTTCCCAGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLPRGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCTGGGAAG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTCGCGGCTGCACCCCTaGCTCATGCTGGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFSRLHP*LMLGRG
Trigger: CCCCCGACCCAGCATGAGTCAGGGGTGCAGCCGCGA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTCGCGGCTGCACCCCTaGCTCATGCTGGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADSRLHP*LMLGRG
Trigger: CCCCCGACCCAGCATGAGTCAGGGGTGCAGCCGCGA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGACCGATCGAGTGGTGTaGAGCCCCGAGCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGTDRVV*SPEQGL
Trigger: CAAGCCCTGCTCGGGGCTTCACACCACTCGATCGGT...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCCCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADALGGR*GCSPIS
Trigger: CGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGALGGR*GCSPIS
Trigger: CGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFALGGR*GCSPIS
Trigger: CGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTALGGR*GCSPIS
Trigger: CGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGC...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGACCGGCTGCCAGGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHDRLPG*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCCTGGCAGCCGGTC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000189262.7
CDS-3UTR GCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAAGAACTGATGACAGATaGCCCAATGTGATACAAGCT +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGARTDDR*PNVIQA
Trigger: AGCTTGTATCACATTGGGGCATCTGTCATCAGTTCT...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTSWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTASWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGTGCTCCCCGAGCTCTaGCGTCTCGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGVLPEL*RLVRIR
Trigger: TCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCAC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGTGCTCCCCGAGCTCTaGCGTCTCGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTVLPEL*RLVRIR
Trigger: TCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCAC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGTGCTCCCCGAGCTCTaGCGTCTCGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAVLPEL*RLVRIR
Trigger: TCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCAC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGATCGGTCTGACTaGGGCAGAGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHEDRSD*GRDTML
Trigger: CAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGACTAAGCAAAACACACTaGCTTTCCGTACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGLSKTH*LSVHCS
Trigger: AGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAG...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGGCTTCTTCTTGCTCCTaGCGTCTCCTAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTASSCS*RLLTAE
Trigger: CTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGAAGC...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000178710.8
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
3UTR CAA 72 bp GCTCTTGGCCCCGGAAAGGCACGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTGTCCAAAGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: ALGPGKARGGCV*SREVLLSKAIL
Trigger: CAGGATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGGCCAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
CDS-3UTR TCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACDCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCTCGCGGCTGCACCCCTaGCTCATGCTGGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSSRLHP*LMLGRG
Trigger: CCCCCGACCCAGCATGAGTCAGGGGTGCAGCCGCGA...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCACCAGGGATTCGTCCTaGCTGGCCCAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTTRDSS*LAQPKP
Trigger: CGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCACCAGGGATTCGTCCTaGCTGGCCCAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTATRDSS*LAQPKP
Trigger: CGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GTCCTCTTTCCTCCTACAGTTGGTGCCAGGCCCTACCCTAGGTTCACGGGCTGCGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VLFPPTVGARPYPRFTGCVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...GCAGCCCGTGAACCTAGGGTAGGGCCTGGCACCAACTGTAGGAGGAAAGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGTGAGCTGTGCGAGGTaGGGTTTCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHVSCAR*GFRSSP
Trigger: CGGAGAAGATCTGAAACCTCACCTCGCACAGCTCAC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGATATGTGGCACAATCTTaGTTAGTGTTAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGYVAQS*LVLESG
Trigger: CCCAGACTCTAACACTAAGCAAGATTGTGCCACATA...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCSWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCAGCTCTGCCGTCTCGTaGGGATCCGACCTAGGGACG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTSSAVS*GSDLGT
Trigger: CGTCCCTAGGTCGGATCCGCACGAGACGGCAGAGCT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCAGCTCTGCCGTCTCGTaGGGATCCGACCTAGGGACG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSSAVS*GSDLGT
Trigger: CGTCCCTAGGTCGGATCCGCACGAGACGGCAGAGCT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGTGCTCCCCGAGCTCTaGCGTCTCGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTVLPEL*RLVRIR
Trigger: TCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCAC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTGCACCCCTGACTCATaGTGGGTCGGGGGATACGGC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGCTPDS*WVGGYG
Trigger: GCCGTATCCCCCGACCCAGCATGAGTCAGGGGTGCA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGCTGCTTCCAGGTCAGTaGTGGTACTCAAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTLLPGQ*WYSRLS
Trigger: TGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAG...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTCAGGGGGCTGGTCCTaGTGCTGGGGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFSGGWS*CWGGGK
Trigger: CTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCACCCCTGACTCATGCTaGGTCGGGGGATACGGCTGC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGTPDSC*VGGYGC
Trigger: GCAGCCGTATCCCCCGACCCAGCATGAGTCAGGGGT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGTCCTGCTGCTGGGGTaGCGGGAAGGTGTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLVLLLG*REGVRP
Trigger: TGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGAC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGGAGATAGTCCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHGDSPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGACTATCTCC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
3UTR CAA 72 bp TCCTGCTGCTGGGGTGGCGGGAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCACACCGGTGTTACTGG +
Preference number: 4 (lower is better)
Translates to: SCCWGGGKVSGQ*YCLEIPHRCYW
Trigger: CCAGTAACACCGGTGTGGGATCTCCAAGCAATACAATTGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
CDS-3UTR TCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAAGACTTCTGTCTGTCTaGGAAATAGTCTATGAGTTC +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGRLLSV*EIVYEF
Trigger: GAACTCATAGACTATTTCTCAGACAGACAGAAGTCT...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGCTTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGCTTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGGGAAGAGGATCGGTCTaGCTGGGGCAGAGACACGAT +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGGRGSV*LGQRHD
Trigger: ATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCC...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGTGCTGCTGCAGAGCTaGAGGCGGGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFVLLQS*RRGILR
Trigger: CCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCAC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCTTCCCAGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFLPRGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCTGGGAAG...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCTTCCCAGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADLPRGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCTGGGAAG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCCTTCCCAGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGLPRGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCTGGGAAG...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTGTCAGCCACCAGGTCTaGGTGGTCAATGGGCACATC +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFVSHQV*VVNGHI
Trigger: GATGTGCCCATTGACCACTCAGACCTGGTGGCTGAC...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGAGCTCTGCCGTCTCGTaGGGATCCGACCTAGGGACG +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPSSAVS*GSDLGT
Trigger: CGTCCCTAGGTCGGATCCGCACGAGACGGCAGAGCT...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGTGCTCCCCGAGCTCTaGCGTCTCGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAVLPEL*RLVRIR
Trigger: TCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCAC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGTGCTCCCCGAGCTCTaGCGTCTCGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLVLPEL*RLVRIR
Trigger: TCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCAC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGTGCTCCCCGAGCTCTaGCGTCTCGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADVLPEL*RLVRIR
Trigger: TCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCAC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFSVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGTGTCCAAAGCCATCCTaGCTCCTTCTATCTCACTAC +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTCPKPS*LLLSHY
Trigger: GTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACA...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTADCRRV*RRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTTVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTTACCGGTGGGCCTCTaGAGGAACCCCCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGLPVGL*RNPQQV
Trigger: GACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTTACCGGTGGGCCTCTaGAGGAACCCCCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLPVGL*RNPQQV
Trigger: GACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGACCCCTGACTCATGCTaGGTCGGGGGATACGGCTGC +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTTPDSC*VGGYGC
Trigger: GCAGCCGTATCCCCCGACCCAGCATGAGTCAGGGGT...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGGCTGCTCTCACGGCTaGTATCGCGGCTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLGCSHG*YRGCTP
Trigger: AGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTGIRPD*PSPNRS
Trigger: CGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCCTTCCAGGTCAGTGCTaGTACTCAAGACTCTCATGG +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACLPGQC*YSRLSW
Trigger: CCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAG...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCACTAGTCTTGTTTCGCTaGAATTTACAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGALVLFR*NLQNLW
Trigger: CCACAGATTTTGTAAATTCCAGCGAAACAAGACTAG...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTGTCCTGCTGCTGGGGTaGCGGGAAGGTGTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVVLLLG*REGVRP
Trigger: TGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGAC...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGTCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTSTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGGAAGAGGATCGGTCTaGCTGGGGCAGAGACACGAT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGGRGSV*LGQRHD
Trigger: ATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCCTTCCCAGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSLPRGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCTGGGAAG...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTCTCGGCTACATCCCTaGCTCCTGGGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSRLHP*LLGILL
Trigger: GAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTCTCGGCTACATCCCTaGCTCCTGGGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTASRLHP*LLGILL
Trigger: GAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTACCAGGGATTCGTCCTaGCTGGCCCAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLATRDSS*LAQPKP
Trigger: CGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGT...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCAGGGATTCGTCCTaGCTGGCCCAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGTRDSS*LAQPKP
Trigger: CGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGTCAGCCACCAGGTCTaGGTGGTCAATGGGCACATC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAVSHQV*VVNGHI
Trigger: GATGTGCCCATTGACCACTCAGACCTGGTGGCTGAC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCGAGAGGCGAGTGGTGTaGAGCCCCGAGCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSERRVV*SPEQGL
Trigger: CAAGCCCTGCTCGGGGCTTCACACCACTCGCCTCTC...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070989.14
ENSMUST00000188710.7
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCAGTTCCTGGCCAACCTaGAGCCGCTTTCCCACATCC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTSSWPT*SRFPTS
Trigger: GGATGTGGGAAAGCGGCTGCAGGTTGGCCAGGAACT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCAGTTCCTGGCCAACCTaGAGCCGCTTTCCCACATCC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTASSWPT*SRFPTS
Trigger: GGATGTGGGAAAGCGGCTGCAGGTTGGCCAGGAACT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPALNRS*SLVTSA
Trigger: GGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGC...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGCAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCATCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: PHSTGVHLESAGPAEGGASSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCTGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCTGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCTCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSSWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCAGCTCTGCCGTCTCGTaGGGATCCGACCTAGGGACG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGSSAVS*GSDLGT
Trigger: CGTCCCTAGGTCGGATCCGCACGAGACGGCAGAGCT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCGTGCTCCCCGAGCTCTaGCGTCTCGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSVLPEL*RLVRIR
Trigger: TCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCAC...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGTCGGGGGATACGGCTaGTCCGTGCTAATCCAATCC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGVGGYG*SVLIQS
Trigger: GGATTGGATTAGCACGGAGCAGCCGTATCCCCCGAC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTGCACCCCTGACTCATaGTGGGTCGGGGGATACGGC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGCTPDS*WVGGYG
Trigger: GCCGTATCCCCCGACCCAGCATGAGTCAGGGGTGCA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTGGCTGGTATCGCGGCTaGACCCCTGACTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTGWYRG*TPDSCW
Trigger: CCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCC...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGGCTGGTATCGCGGCTaGACCCCTGACTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADGWYRG*TPDSCW
Trigger: CCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTASVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTSVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGCTCCCCGTGAGCTGTaGGAGGTGAGGTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAAPREL*EVRFQI
Trigger: GATCTGAAACCTCACCTCGCACAGCTCACGGGGAGC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGCTCCCCGTGAGCTGTaGGAGGTGAGGTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTAPREL*EVRFQI
Trigger: GATCTGAAACCTCACCTCGCACAGCTCACGGGGAGC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGAGGATCGGTCTGACTaGGGCAGAGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAEDRSD*GRDTML
Trigger: CAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCDCRRV*RRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTDCRRV*RRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTGGCTGCTCTCACGGCTaGTATCGCGGCTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVGCSHG*YRGCTP
Trigger: AGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCC...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCGGCTGCTCTCACGGCTaGTATCGCGGCTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSGCSHG*YRGCTP
Trigger: AGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCC...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGTCCTGCTGCTGGGGTaGCGGGAAGGTGTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAVLLLG*REGVRP
Trigger: TGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGAC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGCCACCAGGTCTGAGTaGTCAATGGGCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAATRSE*SMGTSR
Trigger: CCGAGATGTGCCCATTGACCACTCAGACCTGGTGGC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGCTAAGCAAAACACACTaGCTTTCCGTACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTLSKTH*LSVHCS
Trigger: AGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAG...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTGIRPD*PSPNRS
Trigger: AGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGGIRPD*PSPNRS
Trigger: AGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000191445.7
ENSMUST00000191823.6
3UTR CAA 72 bp CTGCTGGGGTGGCGGGAAGGTGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCGGTGTTACTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LLGWREGVRPIV*LGDPTPVLLEF
Trigger: GAACTCCAGTAACACCGGTGTGGGATCTCCAAGCAATACAATTGGCCGGACACCTTCCCGCCACCCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CAA 72 bp TCCAGCAGTGCGCCCTTCCGCTCCTCCACACGCTCGTaGTGGTTAGATAGCTCTTTCAGCAAGTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SSSAPFRSSTRS*WLDSSFSKSAT
Trigger: GGTGGCTGACTTGCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGAGGAGCGGAAGGGCGCACTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
CDS-3UTR TCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGCTTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGCTTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGGAAGAGGATCGGTCTaGCTGGGGCAGAGACACGAT +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCGRGSV*LGQRHD
Trigger: ATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCACTTCCCAGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPALPRGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCTGGGAAG...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTCTCGGCTACATCCCTaGCTCCTGGGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPSRLHP*LLGILL
Trigger: GAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGA...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCGTTCAAACAGAGAGATaGGCACAATTTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACVQTER*AQFVLP
Trigger: AGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAAC...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGTCAGCCACCAGGTCTaGGTGGTCAATGGGCACATC +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTVSHQV*VVNGHI
Trigger: GATGTGCCCATTGACCACTCAGACCTGGTGGCTGAC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTTTGGACACAGCACTTTaGTGCACTGCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFLDTAL*CTALGG
Trigger: TCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAA...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGTGAGCTGTGCGAGGTaGGGTTTCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTVSCAR*GFRSSP
Trigger: CGGAGAAGATCTGAAACCTCACCTCGCACAGCTCAC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCCTAGTGGACCTGGAATaGCGTCGAGAGGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCLVDLE*RREASG
Trigger: ACCACTCGCCTCTCGACGTCATTCCAGGTCCACTAG...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070989.14
ENSMUST00000188710.7
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTTTCCCACATCCTTCTaGAGCACCTGGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAFPTSF*STWARQ
Trigger: CTGTCTGGCCCAGGTGCTGCAGAAGGATGTGGGAAA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp AGAGGTACAGTTGCTGGTTATGACAGGGATCAGCCGAGGGATGTGAGTGTGCCGAGTTCCTGGCCAACCTaGAGCCGCTTTCCCACATCC +
Preference number: 4 (lower is better)
Translates to: RGTVAGYDRDQPRDVSVPSSWPT*SRFPTS
Trigger: GGATGTGGGAAAGCGGCTGCAGGTTGGCCAGGAACT...CGGCACACTCACATCCCTCGGCTGATCCCTGTCATAACCAGCAACTGTACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
CDS-3UTR GCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCAACACTGTGCCGATTTaGGCCTTGAACCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGNTVPI*ALNRSC
Trigger: GCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCAGAGCATTTACTCTCTaGTCCCAGTCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACRAFTL*SQSCLS
Trigger: TGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCT...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGATCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTCTCTGGATGCAGTGCTaGCAGTGGGACTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFLWMQC*QWDFFW
Trigger: CCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAG...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGAGCCTCTGGATGCAGTaGTGCCAGTGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGSLWMQ*CQWDFF
Trigger: AAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCT...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTGTAGAGCCTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGCRASG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTGTAGAGCCTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTCRASG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGGCTTGTATCGCGGCTaGTCTCACGGCTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGGLYRG*SHGWYR
Trigger: GCGATACCAGCCGTGAGAGCAGCCGCGATACAAGCC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGGCTTGTATCGCGGCTaGTCTCACGGCTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAGLYRG*SHGWYR
Trigger: GCGATACCAGCCGTGAGAGCAGCCGCGATACAAGCC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPSVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCATGTCGACGAGGAGCTaGAGCAAGGACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTMSTRS*SKDSLV
Trigger: CACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACAT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCAGCTCTGCCGTCTCGTaGGGATCCGACCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGSSAVS*GSDLHP
Trigger: TGGATGCAGGTCGGATCCGCACGAGACGGCAGAGCT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000189570.7
CDS-3UTR GCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTAGCTCTGCCGTCTCGTaGGGATCCGACCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTSSAVS*GSDLHP
Trigger: TGGATGCAGGTCGGATCCGCACGAGACGGCAGAGCT...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000189570.7
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTCCTTCTGCAGCACCTaGGCCAGACAGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTSFCST*ARQDSI
Trigger: AATGGAGTCCTGTCTGGCCCAGGTGCTGCAGAAGGA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTCCTTCTGCAGCACCTaGGCCAGACAGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSFCST*ARQDSI
Trigger: AATGGAGTCCTGTCTGGCCCAGGTGCTGCAGAAGGA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATATTCAACCGGGACTGTaGCAGTCCTTTCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHIQPGL*QSFLTE
Trigger: CTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAAT...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGTGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGAGGATCGGTCTGACTaGGGCAGAGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTEDRSD*GRDTML
Trigger: CAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGGAGGATCGGTCTGACTaGGGCAGAGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPEDRSD*GRDTML
Trigger: CAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTC...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGTCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLDCRRV*RRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFTVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADTVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGTVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGTTACCGGTGGGCCTCTaGAGGAACCCCCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLLPVGL*RNPQQV
Trigger: GACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTACCGGTGGGCCTCTaGAGGAACCCCCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTLPVGL*RNPQQV
Trigger: GACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTTACCGGTGGGCCTCTaGAGGAACCCCCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGLPVGL*RNPQQV
Trigger: GACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGCTCAGAGCACACGCTaGAGGCATCACTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTAQSTR*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGGAGATAGTCCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAGDSPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGACTATCTCC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGGAGATAGTCCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTGDSPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGACTATCTCC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTCACCACCTCCTTGTaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCTCACCACCTCCTTGTaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGGAAGAGGATCGGTCTaGCTGGGGCAGAGACACGAT +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADGRGSV*LGQRHD
Trigger: ATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTGGAAGAGGATCGGTCTaGCTGGGGCAGAGACACGAT +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTGRGSV*LGQRHD
Trigger: ATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCC...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTCGGCTACATCCCTaGCTCCTGGGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLASRLHP*LLGILL
Trigger: GAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGA...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTCTCGGCTACATCCCTaGCTCCTGGGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGSRLHP*LLGILL
Trigger: GAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCATCGCGGCTGCACCCCTaGCTCATGCTGGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSSRLHP*LMLGRG
Trigger: CCCCCGACCCAGCATGAGTCAGGGGTGCAGCCGCGA...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGCCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCCCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGTTCAAACAGAGAGATaGGCACAATTTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHVQTER*AQFVLP
Trigger: AGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAAC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPALGGR*GCSPIS
Trigger: CGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGTCAGCCACCAGGTCTaGGTGGTCAATGGGCACATC +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFVSHQV*VVNGHI
Trigger: GATGTGCCCATTGACCACTCAGACCTGGTGGCTGAC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGTCAGCCACCAGGTCTaGGTGGTCAATGGGCACATC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGVSHQV*VVNGHI
Trigger: GATGTGCCCATTGACCACTCAGACCTGGTGGCTGAC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTTGGACACAGCACTTTaGTGCACTGCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGLDTAL*CTALGG
Trigger: TCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTTGGACACAGCACTTTaGTGCACTGCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLDTAL*CTALGG
Trigger: TCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGTGAGCTGTGCGAGGTaGGGTTTCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCVSCAR*GFRSSP
Trigger: CGGAGAAGATCTGAAACCTCACCTCGCACAGCTCAC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGACCGGCTGCCAGGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLADRLPG*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCCTGGCAGCCGGTC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000187713.7
ENSMUST00000189262.7
ENSMUST00000189570.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTTTCCCACATCCTTCTaGAGCACCTGGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTFPTSF*STWARQ
Trigger: CTGTCTGGCCCAGGTGCTGCAGAAGGATGTGGGAAA...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCAGTTCCTGGCCAACCTaGAGCCGCTTTCCCACATCC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGSSWPT*SRFPTS
Trigger: GGATGTGGGAAAGCGGCTGCAGGTTGGCCAGGAACT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCAGTTCCTGGCCAACCTaGAGCCGCTTTCCCACATCC +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFSSWPT*SRFPTS
Trigger: GGATGTGGGAAAGCGGCTGCAGGTTGGCCAGGAACT...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTNRVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSALNRS*SLVTSA
Trigger: GGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGC...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVALNRS*SLVTSA
Trigger: GGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGC...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCAACACTGTGCCGATTTaGGCCTTGAACCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCNTVPI*ALNRSC
Trigger: GCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTT...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGAACACTGTGCCGATTTaGGCCTTGAACCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPNTVPI*ALNRSC
Trigger: GCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTT...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGAACACTGTGCCGATTTaGGCCTTGAACCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTNTVPI*ALNRSC
Trigger: GCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTT...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATAGAGCATTTACTCTCTaGTCCCAGTCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHRAFTL*SQSCLS
Trigger: TGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCT...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCAGAACTGATGACAGATaGCCCAATGTGATACAAGCT +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACRTDDR*PNVIQA
Trigger: AGCTTGTATCACATTGGGGCATCTGTCATCAGTTCT...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTGTGGTACAGGTGTTCTaGTTCTCGGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFVVQVF*FSAEVT
Trigger: AGTCACTTCAGCCGAGAAGCAGAACACCTGTACCAC...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTCTGGATGCAGTGCTaGCAGTGGGACTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGLWMQC*QWDFFW
Trigger: CCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCAGCCTCTGGATGCAGTaGTGCCAGTGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSLWMQ*CQWDFF
Trigger: AAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCAGCCTCTGGATGCAGTaGTGCCAGTGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTSLWMQ*CQWDFF
Trigger: AAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCAGCCTCTGGATGCAGTaGTGCCAGTGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTASLWMQ*CQWDFF
Trigger: AAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTGTAGAGCCTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPCRASG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGTCGGGGGATACGGCTaGTCCGTGCTAATCCAATCC +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFVGGYG*SVLIQS
Trigger: GGATTGGATTAGCACGGAGCAGCCGTATCCCCCGAC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGTCGGGGGATACGGCTaGTCCGTGCTAATCCAATCC +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLVGGYG*SVLIQS
Trigger: GGATTGGATTAGCACGGAGCAGCCGTATCCCCCGAC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGCTGCTTCCAGGTCAGTaGTGGTACTCAAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGLLPGQ*WYSRLS
Trigger: TGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAG...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLSVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLASVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTTCAGGGGGCTGGTCCTaGTGCTGGGGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALASGGWS*CWGGGK
Trigger: CTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGA...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCTCAGGGGGCTGGTCCTaGTGCTGGGGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTSGGWS*CWGGGK
Trigger: CTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGA...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGCTCCCCGTGAGCTGTaGGAGGTGAGGTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADAPREL*EVRFQI
Trigger: GATCTGAAACCTCACCTCGCACAGCTCACGGGGAGC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGCTCCCCGTGAGCTGTaGGAGGTGAGGTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLAPREL*EVRFQI
Trigger: GATCTGAAACCTCACCTCGCACAGCTCACGGGGAGC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTTCACAGGCTTCTTCTTaGTCCTGGCGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFSQASS*SWRLLT
Trigger: TGTTAGGAGACGCCAGGAGCAAGAAGAAGCCTGTGA...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000178710.8
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTCCTTCTGCAGCACCTaGGCCAGACAGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPSFCST*ARQDSI
Trigger: AATGGAGTCCTGTCTGGCCCAGGTGCTGCAGAAGGA...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTCGAACCTGGCTGTTaGGATCTCCCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGLEPGC*DLPVGY
Trigger: GTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCTCGAACCTGGCTGTTaGGATCTCCCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTALEPGC*DLPVGY
Trigger: GTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTGAGGATCGGTCTGACTaGGGCAGAGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTEDRSD*GRDTML
Trigger: CAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTC...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTASLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSTVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTTACCGGTGGGCCTCTaGAGGAACCCCCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVLPVGL*RNPQQV
Trigger: GACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAGTCCTGCTGCTGGGGTaGCGGGAAGGTGTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLVLLLG*REGVRP
Trigger: TGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGAC...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALAGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGGGAGATAGTCCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPGDSPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGACTATCTCC...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGCCACCAGGTCTGAGTaGTCAATGGGCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLATRSE*SMGTSR
Trigger: CCGAGATGTGCCCATTGACCACTCAGACCTGGTGGC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGCCACCAGGTCTGAGTaGTCAATGGGCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADATRSE*SMGTSR
Trigger: CCGAGATGTGCCCATTGACCACTCAGACCTGGTGGC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGCCACCAGGTCTGAGTaGTCAATGGGCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGATRSE*SMGTSR
Trigger: CCGAGATGTGCCCATTGACCACTCAGACCTGGTGGC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAGIRPD*PSPNRS
Trigger: AGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGCTTCTTCTTGCTCCTaGCGTCTCCTAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTASSCS*RLLTAE
Trigger: CTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGAAGC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGCTTCTTCTTGCTCCTaGCGTCTCCTAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGASSCS*RLLTAE
Trigger: CTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGAAGC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
3UTR CAA 72 bp CAGCAAGTCCACTTCCCAAAAGCTTCCCAGGGGAACTaGACCGGCTGCCAGGCTGAGACTGTGAAACCACTT +
Preference number: 4 (lower is better)
Translates to: QQVHFPKASQGN*TGCQAETVKPL
Trigger: AAGTGGTTTCACAGTCTCAGCCTGGCAGCCGGTCAAGTTCCCCTGGGAAGCTTTTGGGAAGTGGACTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CAA 72 bp TGCAGGCCCAGGAGCCCCTCTTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTGAGAACCTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: CRPRSPSFRSDQ*ELAQWLRTSAT
Trigger: TGTAGCAGAGGTTCTCAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGGCTCCTGGGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CAA 72 bp AAGGCACGTGGAGGCTGCGTGTTGAGCAGGGAGGTCTaGTTGTCCAAAGCCATCCTGCCTCCTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: KARGGCVLSREV*LSKAILPPSIS
Trigger: TGAGATAGAAGGAGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
CDS-3UTR TCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGCTGAGAAATAGTCTATaGGTTCCTGGCCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGLRNSL*VPGQPA
Trigger: TGCAGGTTGGCCAGGAACTCATAGACTATTTCTCAG...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCAGAAGACGCAAGTGTTaGAAGAAGTTATCGTACTCA +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACRRRKC*KKLSYS
Trigger: TGAGTACGATAACTTCTTTCAACACTTGCGTCTTCT...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGCTTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTDCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGTGCTGCTGCAGAGCTaGAGGCGGGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPVLLQS*RRGILR
Trigger: CCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCAC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTGTGCTGCTGCAGAGCTaGAGGCGGGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALAVLLQS*RRGILR
Trigger: CCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCAC...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTADLDR*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCGATCCAGATCTGC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCTTCCCAGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNLPRGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCTGGGAAG...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCAGGACTGCAAAGCAAATGCCATTACTGTCTGGGTCACTTGTCAGTCTCAGGTACCAGGGATTCGTCCTaGCTGGCCCAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: SGLQSKCHYCLGHLSVSGTRDSS*LAQPKP
Trigger: CGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGT...ACCTGAGACTGACAAGTGACCCAGACAGTAATGGCATTTGCTTTGCAGTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCATTCCTGGAGCCATATaGGCGCTCAGAGCACACGCT +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFIPGAI*ALRAHA
Trigger: AGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAAT...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCATTCCTGGAGCCATATaGGCGCTCAGAGCACACGCT +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGIPGAI*ALRAHA
Trigger: AGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAAT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACATTCCTGGAGCCATATaGGCGCTCAGAGCACACGCT +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADIPGAI*ALRAHA
Trigger: AGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAAT...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCCCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCTGGCTTCGGAAGCTaGACTTTTCAATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGPGFGS*TFQWLL
Trigger: CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCCTGGCTTCGGAAGCTaGACTTTTCAATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAPGFGS*TFQWLL
Trigger: CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATTCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHSCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGALGGR*GCSPIS
Trigger: CGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCGTCAGCCACCAGGTCTaGGTGGTCAATGGGCACATC +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSVSHQV*VVNGHI
Trigger: GATGTGCCCATTGACCACTCAGACCTGGTGGCTGAC...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCGTCAGCCACCAGGTCTaGGTGGTCAATGGGCACATC +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSVSHQV*VVNGHI
Trigger: GATGTGCCCATTGACCACTCAGACCTGGTGGCTGAC...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTTTCCCACATCCTTCTaGAGCACCTGGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAFPTSF*STWARQ
Trigger: CTGTCTGGCCCAGGTGCTGCAGAAGGATGTGGGAAA...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCAGTTCCTGGCCAACCTaGAGCCGCTTTCCCACATCC +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSSSWPT*SRFPTS
Trigger: GGATGTGGGAAAGCGGCTGCAGGTTGGCCAGGAACT...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACAACACTGTGCCGATTTaGGCCTTGAACCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADNTVPI*ALNRSC
Trigger: GCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTT...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGTGGTACAGGTGTTCTaGTTCTCGGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAVVQVF*FSAEVT
Trigger: AGTCACTTCAGCCGAGAAGCAGAACACCTGTACCAC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGTGGTACAGGTGTTCTaGTTCTCGGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGVVQVF*FSAEVT
Trigger: AGTCACTTCAGCCGAGAAGCAGAACACCTGTACCAC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCCTCTGGATGCAGTGCTaGCAGTGGGACTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCLWMQC*QWDFFW
Trigger: CCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAG...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGCTCTGGATGCAGTGCTaGCAGTGGGACTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTLWMQC*QWDFFW
Trigger: CCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAG...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTGTAGAGCCTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLACRASG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTGTAGAGCCTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTCRASG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCATGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCTCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTSWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTTCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALASWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTDSWGS*SVFLRM
Trigger: CATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTGGCTGGTATCGCGGCTaGACCCCTGACTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLGWYRG*TPDSCW
Trigger: CCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCC...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCTGCTTCCAGGTCAGTaGTGGTACTCAAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLLPGQ*WYSRLS
Trigger: TGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCTGCTTCCAGGTCAGTaGTGGTACTCAAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTALLPGQ*WYSRLS
Trigger: TGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSSVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCAGGGGGCTGGTCCTaGTGCTGGGGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNSGGWS*CWGGGK
Trigger: CTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTTCAGGGGGCTGGTCCTaGTGCTGGGGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPSGGWS*CWGGGK
Trigger: CTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGA...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACATCAGGGGGCTGGTCCTaGTGCTGGGGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTSGGWS*CWGGGK
Trigger: CTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGA...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTTGTCCAAAGCCATCCTaGCTCCTTCTATCTCACTAC +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFCPKPS*LLLSHY
Trigger: GTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACA...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCATGTCGACGAGGAGCTaGAGCAAGGACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGMSTRS*SKDSLV
Trigger: CACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACAT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTATGTCGACGAGGAGCTaGAGCAAGGACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAMSTRS*SKDSLV
Trigger: CACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACAT...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCATGTCGACGAGGAGCTaGAGCAAGGACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFMSTRS*SKDSLV
Trigger: CACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACAT...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTGGCTTTCCGTACACTaGTCTCGGTGTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAWLSVH*SRCCRN
Trigger: GTTACGACAACACCGAGAGCAGTGTACGGAAAGCCA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GTCCTCTTTCCTCCTACAGTTGGTGCCAGGCCCTACCCTAGGTTCACGGGCTGCTATCATAGTCCAGCATaGTTGGAGATAGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: VLFPPTVGARPYPRFTGCYHSPA*LEIVPH
Trigger: ATGGGGGACTATCTCCAAGCATGCTGGACTATGATA...GCAGCCCGTGAACCTAGGGTAGGGCCTGGCACCAACTGTAGGAGGAAAGAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTCACAGGCTTCTTCTTaGTCCTGGCGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTASQASS*SWRLLT
Trigger: TGTTAGGAGACGCCAGGAGCAAGAAGAAGCCTGTGA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTTCTCACAGGCTTCTTaGTCCTGGCGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAFSQAS*SWRLLT
Trigger: TGTTAGGAGACGCCAGGAGCAAGAAGCCTGTGAGAA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTALSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCGAGGATCGGTCTGACTaGGGCAGAGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSEDRSD*GRDTML
Trigger: CAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTC...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGACTCTCTTGAGAGCTaGAAGAGGATCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTADSLES*KRIGLT
Trigger: AGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGACTCTCTTGAGAGCTaGAAGAGGATCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGDSLES*KRIGLT
Trigger: AGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGACTCTCTTGAGAGCTaGAAGAGGATCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTDSLES*KRIGLT
Trigger: AGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTARRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCATTACCGGTGGGCCTCTaGAGGAACCCCCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPALPVGL*RNPQQV
Trigger: GACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGGCTGCTCTCACGGCTaGTATCGCGGCTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQGCSHG*YRGCTP
Trigger: AGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGGCTGCTCTCACGGCTaGTATCGCGGCTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTGCSHG*YRGCTP
Trigger: AGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCTTCCAGGTCAGTGCTaGTACTCAAGACTCTCATGG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLPGQC*YSRLSW
Trigger: CCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGAAATTGTTGATCAAATaGAAAGGAATCCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTKLLIK*KGIPGD
Trigger: GTCACCAGGGATTCCTTTCCATTTGATCAACAATTT...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAGTCCTGCTGCTGGGGTaGCGGGAAGGTGTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSVLLLG*REGVRP
Trigger: TGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGAC...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGGAGATAGTCCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGGDSPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGACTATCTCC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTGCCACCAGGTCTGAGTaGTCAATGGGCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVATRSE*SMGTSR
Trigger: CCGAGATGTGCCCATTGACCACTCAGACCTGGTGGC...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCTCACCACCTCCTTGTaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAG...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCCAGGCTTCTTGCTCCTaGCGTCTCCTAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGQASCS*RLLTAE
Trigger: CTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGCCTG...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000191823.6
3UTR CAA 72 bp AGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTaGGTGATGTCAGCAGGTGGTGCAGACACGTGCAAG +
Preference number: 4 (lower is better)
Translates to: RALDSKSCALHG*VMSAGGADTCK
Trigger: CTTGCACGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
CDS-3UTR TCA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATAGACTTCTGTCTGTCTaGGAAATAGTCTATGAGTTC +
Preference number: 4 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHRLLSV*EIVYEF
Trigger: GAACTCATAGACTATTTCTCAGACAGACAGAAGTCT...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGDCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLADCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGTGCTGCTGCAGAGCTaGAGGCGGGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNVLLQS*RRGILR
Trigger: CCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCAC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGTGCTGCTGCAGAGCTaGAGGCGGGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFVLLQS*RRGILR
Trigger: CCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCAC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTCGCGGCTGCACCCCTaGCTCATGCTGGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSRLHP*LMLGRG
Trigger: CCCCCGACCCAGCATGAGTCAGGGGTGCAGCCGCGA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTCCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGACATCGAGAGCCTTCTaGACTTTTGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGTSRAF*TFACTD
Trigger: ATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGCLSHV*TLWFCS
Trigger: ACTACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCCCTGGCTTCGGAAGCTaGACTTTTCAATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCPGFGS*TFQWLL
Trigger: CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGG...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGCCTGGCTTCGGAAGCTaGACTTTTCAATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPPGFGS*TFQWLL
Trigger: CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGG...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGCCCTCGGTGGCAGGTaGGGCTGCTCCCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNALGGR*GCSPIS
Trigger: CGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTCTTCCAGAGTCTTCATaGTCGTCAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFLPESS*SSVLHS
Trigger: ACTATGCAGAACTGACGATCATGAAGACTCTGGAAG...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTTGGACACAGCACTTTaGTGCACTGCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLALDTAL*CTALGG
Trigger: TCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAA...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTTGGACACAGCACTTTaGTGCACTGCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFLDTAL*CTALGG
Trigger: TCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCAACACTGTGCCGATTTaGGCCTTGAACCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSNTVPI*ALNRSC
Trigger: GCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTT...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTAGAGCATTTACTCTCTaGTCCCAGTCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFRAFTL*SQSCLS
Trigger: TGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCT...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGTGGTACAGGTGTTCTaGTTCTCGGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTVVQVF*FSAEVT
Trigger: AGTCACTTCAGCCGAGAAGCAGAACACCTGTACCAC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACAGCCTCTGGATGCAGTaGTGCCAGTGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADSLWMQ*CQWDFF
Trigger: AAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCT...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCAGCCTCTGGATGCAGTaGTGCCAGTGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGSLWMQ*CQWDFF
Trigger: AAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTTGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNSWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCAGCTCTGCCGTCTCGTaGGGATCCGACCTAGGGACG +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTSSAVS*GSDLGT
Trigger: CGTCCCTAGGTCGGATCCGCACGAGACGGCAGAGCT...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
CDS-3UTR GCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGTGCTCCCCGAGCTCTaGCGTCTCGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPVLPEL*RLVRIR
Trigger: TCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCAC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTDSWGS*SVFLRM
Trigger: CATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTTGCACCCCTGACTCATaGTGGGTCGGGGGATACGGC +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALACTPDS*WVGGYG
Trigger: GCCGTATCCCCCGACCCAGCATGAGTCAGGGGTGCA...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGGCTGGTATCGCGGCTaGACCCCTGACTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTGWYRG*TPDSCW
Trigger: CCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTTCTTGAGGTGGTTATaGAGGAGTTTGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTFLRWL*RSLVAP
Trigger: TGGTGCCACCAAACTCCTGCATAACCACCTCAAGAA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTTCTTGAGGTGGTTATaGAGGAGTTTGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAFLRWL*RSLVAP
Trigger: TGGTGCCACCAAACTCCTGCATAACCACCTCAAGAA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTGTCCAAAGCCATCCTaGCTCCTTCTATCTCACTAC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGCPKPS*LLLSHY
Trigger: GTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTGTCCAAAGCCATCCTaGCTCCTTCTATCTCACTAC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTCPKPS*LLLSHY
Trigger: GTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGGCTTTCCGTACACTaGTCTCGGTGTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCWLSVH*SRCCRN
Trigger: GTTACGACAACACCGAGAGCAGTGTACGGAAAGCCA...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTGGCTTTCCGTACACTaGTCTCGGTGTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTWLSVH*SRCCRN
Trigger: GTTACGACAACACCGAGAGCAGTGTACGGAAAGCCA...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCATTCAACCGGGACTGTaGCAGTCCTTTCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAIQPGL*QSFLTE
Trigger: CTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAAT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGACTCTCTTGAGAGCTaGAAGAGGATCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCDSLES*KRIGLT
Trigger: AGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAACCCCTGACTCATGCTaGGTCGGGGGATACGGCTGC +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPTPDSC*VGGYGC
Trigger: GCAGCCGTATCCCCCGACCCAGCATGAGTCAGGGGT...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCGCTCAGAGCACACGCTaGAGGCATCACTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSAQSTR*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGC...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCCTAGTCTTGTTTCGCTaGAATTTACAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: VQRAAVGSVALHEVVVACLVLFR*NLQNLW
Trigger: CCACAGATTTTGTAAATTCCAGCGAAACAAGACTAG...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTALVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGTCCTGCTGCTGGGGTaGCGGGAAGGTGTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGVLLLG*REGVRP
Trigger: TGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGAC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGCCACCAGGTCTGAGTaGTCAATGGGCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAATRSE*SMGTSR
Trigger: CCGAGATGTGCCCATTGACCACTCAGACCTGGTGGC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTALWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGLWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCCTCACCACCTCCTTGTaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAG...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTCTAAGCAAAACACACTaGCTTTCCGTACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFLSKTH*LSVHCS
Trigger: AGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAG...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGCTAAGCAAAACACACTaGCTTTCCGTACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGLSKTH*LSVHCS
Trigger: AGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAG...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGCTTCTTCTTGCTCCTaGCGTCTCCTAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGASSCS*RLLTAE
Trigger: CTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGAAGC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCTTCCCTCATGTGTCTaGACTCTAGGGACGCATAGG +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTLPSCV*TLGTHR
Trigger: CCTATGCGTCCCTAGAGTCCAGACACATGAGGGAAG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000189570.7
3UTR CAA 72 bp GGTGGCATTACTGATTCTATTCCCAAGGCAGGGAAGTaGGCTCCCTCTGCAAGAGAAACCAACCCCTCGTGT +
Preference number: 4 (lower is better)
Translates to: GGITDSIPKAGK*APSARETNPSC
Trigger: ACACGAGGGGTTGGTTTCTCTTGCAGAGGGAGCCAACTTCCCTGCCTTGGGAATAGAATCAGTAATGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
CDS-3UTR TCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCCTGAGAAATAGTCTATaGGTTCCTGGCCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCLRNSL*VPGQPA
Trigger: TGCAGGTTGGCCAGGAACTCATAGACTATTTCTCAG...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGCTTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGAACTGTCAGGACATCATGTCCCATCATGAAAGTTAGGACACTCACAAAAAGGGTGCTGCTGCAGAGCTaGAGGCGGGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RTVRTSCPIMKVRTLTKRVLLQS*RRGILR
Trigger: CCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCAC...CCTTTTTGTGAGTGTCCTAACTTTCATGATGGGACATGATGTCCTGACAGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGTGCTGCTGCAGAGCTaGAGGCGGGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGVLLQS*RRGILR
Trigger: CCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCAC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGADLDR*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCGATCCAGATCTGC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAADLDR*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCGATCCAGATCTGC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCTTCCCAGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGLPRGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCTGGGAAG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTACCGATCGAGTGGTGTaGAGCCCCGAGCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPTDRVV*SPEQGL
Trigger: CAAGCCCTGCTCGGGGCTTCACACCACTCGATCGGT...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAACCAGGGATTCGTCCTaGCTGGCCCAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTTRDSS*LAQPKP
Trigger: CGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGT...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCAACTGGCACAATGGTTaGGAACCTCTGCTACATCTT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTANWHNG*EPLLHL
Trigger: AAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCACATCGAGAGCCTTCTaGACTTTTGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTATSRAF*TFACTD
Trigger: ATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCACATCGAGAGCCTTCTaGACTTTTGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGTSRAF*TFACTD
Trigger: ATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGCLSHV*TLWFCS
Trigger: ACTACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTACLSHV*TLWFCS
Trigger: ACTACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGTTCAAACAGAGAGATaGGCACAATTTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGVQTER*AQFVLP
Trigger: AGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAAC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGTAGACAGCACATGAGGAATAACACTGAAGGCTGTTATTCCTCTGGCCTGTATGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SRQHMRNNTEGCYSSGLYGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...ATACAGGCCAGAGGAATAACAGCCTTCAGTGTTATTCCTCATGTGCTGTCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCTTCCAGAGTCTTCATaGTCGTCAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLPESS*SSVLHS
Trigger: ACTATGCAGAACTGACGATCATGAAGACTCTGGAAG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCTTGGACACAGCACTTTaGTGCACTGCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSLDTAL*CTALGG
Trigger: TCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAA...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTCACATTCTGCTTCTaGATCAGCAATCTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGLTFCF*ISNLAV
Trigger: CACAGCAAGATTGCTGATTCAGAAGCAGAATGTGAG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185405.7
CDS-3UTR GCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVNRVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTT...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPALNRS*SLVTSA
Trigger: GGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTALNRS*SLVTSA
Trigger: GGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCAGAGCATTTACTCTCTaGTCCCAGTCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTARAFTL*SQSCLS
Trigger: TGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCAGAGCATTTACTCTCTaGTCCCAGTCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGRAFTL*SQSCLS
Trigger: TGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGTGGTACAGGTGTTCTaGTTCTCGGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGVVQVF*FSAEVT
Trigger: AGTCACTTCAGCCGAGAAGCAGAACACCTGTACCAC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGTGGTACAGGTGTTCTaGTTCTCGGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADVVQVF*FSAEVT
Trigger: AGTCACTTCAGCCGAGAAGCAGAACACCTGTACCAC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTCTCTGGATGCAGTGCTaGCAGTGGGACTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVLWMQC*QWDFFW
Trigger: CCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAG...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCATGTAGAGCCTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPACRASG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTATGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGSWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCAGCTCTGCCGTCTCGTaGGGATCCGACCTAGGGACG +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFSSAVS*GSDLGT
Trigger: CGTCCCTAGGTCGGATCCGCACGAGACGGCAGAGCT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGTGCTCCCCGAGCTCTaGCGTCTCGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGVLPEL*RLVRIR
Trigger: TCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCAC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLDSWGS*SVFLRM
Trigger: CATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLADSWGS*SVFLRM
Trigger: CATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGDSWGS*SVFLRM
Trigger: CATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTGCACCCCTGACTCATaGTGGGTCGGGGGATACGGC +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNCTPDS*WVGGYG
Trigger: GCCGTATCCCCCGACCCAGCATGAGTCAGGGGTGCA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGGCTGGTATCGCGGCTaGACCCCTGACTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPGWYRG*TPDSCW
Trigger: CCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACGGCTTGTATCGCGGCTaGTCTCACGGCTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNGLYRG*SHGWYR
Trigger: GCGATACCAGCCGTGAGAGCAGCCGCGATACAAGCC...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCTGCTTCCAGGTCAGTaGTGGTACTCAAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADLLPGQ*WYSRLS
Trigger: TGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATCAGGGGGCTGGTCCTaGTGCTGGGGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLESGGWS*CWGGGK
Trigger: CTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGTCAGGGGGCTGGTCCTaGTGCTGGGGTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLSGGWS*CWGGGK
Trigger: CTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGA...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CTAGCCTCAGTTCAGTCTGAGCTCCTGGAATCCAAGAAACAAGTCAGTGTCTGTAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LASVQSELLESKKQVSVCRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...ACAGACACTGACTTGTTTCTTGGATTCCAGGAGCTCAGACTGAACTGAGGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTGGCTTTCCGTACACTaGTCTCGGTGTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGWLSVH*SRCCRN
Trigger: GTTACGACAACACCGAGAGCAGTGTACGGAAAGCCA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGTGGCTTTCCGTACACTaGTCTCGGTGTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLWLSVH*SRCCRN
Trigger: GTTACGACAACACCGAGAGCAGTGTACGGAAAGCCA...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGCCAAACCGATCTGACTaGCCAACAGATTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLPNRSD*PTDSAV
Trigger: CACTGCTGAATCTGTTGGGCAGTCAGATCGGTTTGG...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000070989.14
ENSMUST00000188710.7
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTATCATAGTCCAGCATaGTTGGAGATAGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGYHSPA*LEIVPH
Trigger: ATGGGGGACTATCTCCAAGCATGCTGGACTATGATA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTATCATAGTCCAGCATaGTTGGAGATAGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAYHSPA*LEIVPH
Trigger: ATGGGGGACTATCTCCAAGCATGCTGGACTATGATA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCACAGGCTTCTTCTTaGTCCTGGCGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLASQASS*SWRLLT
Trigger: TGTTAGGAGACGCCAGGAGCAAGAAGAAGCCTGTGA...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000178710.8
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFLSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLALSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADLSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGLSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTCTCGAACCTGGCTGTTaGGATCTCCCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVLEPGC*DLPVGY
Trigger: GTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAG...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCATTCAACCGGGACTGTaGCAGTCCTTTCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCIQPGL*QSFLTE
Trigger: CTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAAT...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGACTCTCTTGAGAGCTaGAAGAGGATCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGDSLES*KRIGLT
Trigger: AGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGACTCTCTTGAGAGCTaGAAGAGGATCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADDSLES*KRIGLT
Trigger: AGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCTCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNDCRRV*RRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTC...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLDCRRV*RRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTC...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTDCRRV*RRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLTVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTTVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQTVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTATTACCGGTGGGCCTCTaGAGGAACCCCCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLLPVGL*RNPQQV
Trigger: GACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAATTACCGGTGGGCCTCTaGAGGAACCCCCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQLPVGL*RNPQQV
Trigger: GACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATACCCCTGACTCATGCTaGGTCGGGGGATACGGCTGC +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNTPDSC*VGGYGC
Trigger: GCAGCCGTATCCCCCGACCCAGCATGAGTCAGGGGT...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCTTCCAGGTCAGTGCTaGTACTCAAGACTCTCATGG +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTLPGQC*YSRLSW
Trigger: CCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTCTTCCAGGTCAGTGCTaGTACTCAAGACTCTCATGG +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLALPGQC*YSRLSW
Trigger: CCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAG...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCCTTCCAGGTCAGTGCTaGTACTCAAGACTCTCATGG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGLPGQC*YSRLSW
Trigger: CCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAG...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCTTCCAGGTCAGTGCTaGTACTCAAGACTCTCATGG +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADLPGQC*YSRLSW
Trigger: CCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTGGTTATGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTGYAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCATAACC...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGGTTATGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGGYAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCATAACC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AAGACATCTCGCCGAAAGAGCCTGCTAGCCTCAGTTCAGTCTGAGCTCCTGGAAGGTTATGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: KTSRRKSLLASVQSELLEGYAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCATAACC...TTCCAGGAGCTCAGACTGAACTGAGGCTAGCAGGCTCTTTCGGCGAGATGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR CCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGTCCTGCTGCTGGGGTaGCGGGAAGGTGTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLVLLLG*REGVRP
Trigger: TGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGAC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTGGTCCTGCTGCTaGGGTGGCGGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLGWSCC*GGGKVS
Trigger: GGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTACATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTSTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCLWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCTAAGCAAAACACACTaGCTTTCCGTACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLSKTH*LSVHCS
Trigger: AGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CAGGACTGCAAAGCAAATGCCATTACTGTCTGGGTCACTTGTCAGTCTCAGGTTGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: QDCKANAITVWVTCQSQVGIRPD*PSPNRS
Trigger: AGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...AACCTGAGACTGACAAGTGACCCAGACAGTAATGGCATTTGCTTTGCAGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCCTGAGAAATAGTCTATaGGTTCCTGGCCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGLRNSL*VPGQPA
Trigger: TGCAGGTTGGCCAGGAACTCATAGACTATTTCTCAG...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGAGGTACAGTTGCTGGTTATGACAGGGATCAGCCGAGGGATGTGAGTGTGCCGGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 4 (lower is better)
Translates to: RGTVAGYDRDQPRDVSVPAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...CGGCACACTCACATCCCTCGGCTGATCCCTGTCATAACCAGCAACTGTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204904.3
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGTGCTGCTGCAGAGCTaGAGGCGGGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLVLLQS*RRGILR
Trigger: CCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCAC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGTGCTGCTGCAGAGCTaGAGGCGGGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNVLLQS*RRGILR
Trigger: CCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCAC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCTTCCCAGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLLPRGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCTGGGAAG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCATCTCGGCTACATCCCTaGCTCCTGGGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPSRLHP*LLGILL
Trigger: GAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGA...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTATCTCGGCTACATCCCTaGCTCCTGGGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLSRLHP*LLGILL
Trigger: GAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGA...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAACCAGGGATTCGTCCTaGCTGGCCCAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILTRDSS*LAQPKP
Trigger: CGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGT...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCACATCGAGAGCCTTCTaGACTTTTGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCTSRAF*TFACTD
Trigger: ATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGGTTCAAACAGAGAGATaGGCACAATTTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPVQTER*AQFVLP
Trigger: AGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAAC...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGAGAGTAAGAGCGCCTaGGAGTCTTGTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTESKSA*ESCGRE
Trigger: CTCCCTCCCACAAGACTCTCAGGCGCTCTTACTCTC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTASCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTSCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGTCAGCCACCAGGTCTaGGTGGTCAATGGGCACATC +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQVSHQV*VVNGHI
Trigger: GATGTGCCCATTGACCACTCAGACCTGGTGGCTGAC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGTCAGCCACCAGGTCTaGGTGGTCAATGGGCACATC +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPVSHQV*VVNGHI
Trigger: GATGTGCCCATTGACCACTCAGACCTGGTGGCTGAC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGTAGACAGCACATGAGGAATAACACTGAAGGCTGTTATTCCTCTGGCCTGTATGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: SRQHMRNNTEGCYSSGLYAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...ATACAGGCCAGAGGAATAACAGCCTTCAGTGTTATTCCTCATGTGCTGTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCCTTCCAGAGTCTTCATaGTCGTCAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCLPESS*SSVLHS
Trigger: ACTATGCAGAACTGACGATCATGAAGACTCTGGAAG...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGCTTCCAGAGTCTTCATaGTCGTCAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPLPESS*SSVLHS
Trigger: ACTATGCAGAACTGACGATCATGAAGACTCTGGAAG...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTGTGAGCTGTGCGAGGTaGGGTTTCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLVSCAR*GFRSSP
Trigger: CGGAGAAGATCTGAAACCTCACCTCGCACAGCTCAC...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTGGACAAGAGCCTTCTaGTGGAAACAAATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGWTRAF*WKQISF
Trigger: GAAGGAAATTTGTTTCCATCAGAAGGCTCTTGTCCA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185405.7
CDS-3UTR GCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAAGTTCCTGGCCAACCTaGAGCCGCTTTCCCACATCC +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPSSWPT*SRFPTS
Trigger: GGATGTGGGAAAGCGGCTGCAGGTTGGCCAGGAACT...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALAQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNALNRS*SLVTSA
Trigger: GGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFALNRS*SLVTSA
Trigger: GGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTATGTGGCACAATCTTaGTTAGTGTTAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAYVAQS*LVLESG
Trigger: CCCAGACTCTAACACTAAGCAAGATTGTGCCACATA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTATGTGGCACAATCTTaGTTAGTGTTAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTYVAQS*LVLESG
Trigger: CCCAGACTCTAACACTAAGCAAGATTGTGCCACATA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGCAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGAGAGCATTTACTCTCTaGTCCCAGTCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTRAFTL*SQSCLS
Trigger: TGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCT...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCACTCTGGATGCAGTGCTaGCAGTGGGACTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPALWMQC*QWDFFW
Trigger: CCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAG...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGTGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGGGGGCAGTGCTGCTaGAGAGCTGAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNWGQCC*RAEGGG
Trigger: TCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTCCTGGGGGCAGTGCTaGTGCAGAGCTGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSWGQC*CRAEGG
Trigger: CCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTATGCACCCCTGACTCATaGTGGGTCGGGGGATACGGC +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILCTPDS*WVGGYG
Trigger: GCCGTATCCCCCGACCCAGCATGAGTCAGGGGTGCA...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCCTGCTTCCAGGTCAGTaGTGGTACTCAAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSLLPGQ*WYSRLS
Trigger: TGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAG...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCCTGCTTCCAGGTCAGTaGTGGTACTCAAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSLLPGQ*WYSRLS
Trigger: TGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAG...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLSVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNSVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTTCTTGAGGTGGTTATaGAGGAGTTTGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFFLRWL*RSLVAP
Trigger: TGGTGCCACCAAACTCCTGCATAACCACCTCAAGAA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTTCTTGAGGTGGTTATaGAGGAGTTTGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAFLRWL*RSLVAP
Trigger: TGGTGCCACCAAACTCCTGCATAACCACCTCAAGAA...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTGTCCAAAGCCATCCTaGCTCCTTCTATCTCACTAC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGCPKPS*LLLSHY
Trigger: GTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTGCTCCCCGTGAGCTGTaGGAGGTGAGGTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALAAPREL*EVRFQI
Trigger: GATCTGAAACCTCACCTCGCACAGCTCACGGGGAGC...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACGCTCCCCGTGAGCTGTaGGAGGTGAGGTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNAPREL*EVRFQI
Trigger: GATCTGAAACCTCACCTCGCACAGCTCACGGGGAGC...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTATCATAGTCCAGCATaGTTGGAGATAGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTYHSPA*LEIVPH
Trigger: ATGGGGGACTATCTCCAAGCATGCTGGACTATGATA...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
CDS-3UTR CCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSLSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCACTCGAACCTGGCTGTTaGGATCTCCCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPALEPGC*DLPVGY
Trigger: GTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAG...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTATTCAACCGGGACTGTaGCAGTCCTTTCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAIQPGL*QSFLTE
Trigger: CTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAAT...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGATTCAACCGGGACTGTaGCAGTCCTTTCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLIQPGL*QSFLTE
Trigger: CTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAAT...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSDCRRV*RRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTC...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPDCRRV*RRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSTVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTTVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTCTTCCAGGTCAGTGCTaGTACTCAAGACTCTCATGG +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVLPGQC*YSRLSW
Trigger: CCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAG...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLALVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTGGTTATGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVGYAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCATAACC...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCACATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCGCCTGAGAGTCTTGTaGGAGGGAGCGGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPRLRVL*EGAVGM
Trigger: CATTCCCACCGCTCCCTCCCACAAGACTCTCAGGCG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLASTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTTGAATCTTGCTGGCTaGTTTCTCAGAATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLNLAG*FLRISR
Trigger: ACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTTGAATCTTGCTGGCTaGTTTCTCAGAATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTALNLAG*FLRISR
Trigger: ACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGLWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTLWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCCTAAGCAAAACACACTaGCTTTCCGTACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCLSKTH*LSVHCS
Trigger: AGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAG...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCAGACTTCTGTCTGTCTaGGAAATAGTCTATGAGTTC +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGRLLSV*EIVYEF
Trigger: GAACTCATAGACTATTTCTCAGACAGACAGAAGTCT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCAGAAGACGCAAGTGTTaGAAGAAGTTATCGTACTCA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTARRRKC*KKLSYS
Trigger: TGAGTACGATAACTTCTTTCAACACTTGCGTCTTCT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLDCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CAGGACTGCAAAGCAAATGCCATTACTGTCTGGGTCACTTGTCAGTCTCAGGTTGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: QDCKANAITVWVTCQSQVDCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...AACCTGAGACTGACAAGTGACCCAGACAGTAATGGCATTTGCTTTGCAGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGGAAGAGGATCGGTCTaGCTGGGGCAGAGACACGAT +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTGRGSV*LGQRHD
Trigger: ATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTTCTCGGCTACATCCCTaGCTCCTGGGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPSRLHP*LLGILL
Trigger: GAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGA...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACATCTCGGCTACATCCCTaGCTCCTGGGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTSRLHP*LLGILL
Trigger: GAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGA...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTCTCGGCTACATCCCTaGCTCCTGGGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFSRLHP*LLGILL
Trigger: GAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACACCAGGGATTCGTCCTaGCTGGCCCAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNTRDSS*LAQPKP
Trigger: CGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGACCAGGGATTCGTCCTaGCTGGCCCAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLTRDSS*LAQPKP
Trigger: CGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGT...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGACCAGGGATTCGTCCTaGCTGGCCCAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLTRDSS*LAQPKP
Trigger: CGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTATTCCTGGAGCCATATaGGCGCTCAGAGCACACGCT +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALAIPGAI*ALRAHA
Trigger: AGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAAT...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAATTCCTGGAGCCATATaGGCGCTCAGAGCACACGCT +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPIPGAI*ALRAHA
Trigger: AGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAAT...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCAACTGGCACAATGGTTaGGAACCTCTGCTACATCTT +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFNWHNG*EPLLHL
Trigger: AAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAACTGGCACAATGGTTaGGAACCTCTGCTACATCTT +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLNWHNG*EPLLHL
Trigger: AAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTACCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTCTCCAAAAACATACTaGAAACTCTCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTSPKTY*KLSCCE
Trigger: CTCACAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTCTCCAAAAACATACTaGAAACTCTCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTASPKTY*KLSCCE
Trigger: CTCACAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACATCGAGAGCCTTCTaGACTTTTGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGTSRAF*TFACTD
Trigger: ATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGCLSHV*TLWFCS
Trigger: ACTACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCACCTGGCTTCGGAAGCTaGACTTTTCAATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAPGFGS*TFQWLL
Trigger: CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGG...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTSCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGTCAGCCACCAGGTCTaGGTGGTCAATGGGCACATC +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPVSHQV*VVNGHI
Trigger: GATGTGCCCATTGACCACTCAGACCTGGTGGCTGAC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCTTCCAGAGTCTTCATaGTCGTCAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTLPESS*SSVLHS
Trigger: ACTATGCAGAACTGACGATCATGAAGACTCTGGAAG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCTTCCAGAGTCTTCATaGTCGTCAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADLPESS*SSVLHS
Trigger: ACTATGCAGAACTGACGATCATGAAGACTCTGGAAG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGCTTCCAGAGTCTTCATaGTCGTCAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLLPESS*SSVLHS
Trigger: ACTATGCAGAACTGACGATCATGAAGACTCTGGAAG...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACGTGAGCTGTGCGAGGTaGGGTTTCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNVSCAR*GFRSSP
Trigger: CGGAGAAGATCTGAAACCTCACCTCGCACAGCTCAC...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CAGCACATGAGGAATAACACTGAAGGCTGTTATTCCTCTGGCCTGTATGCATATCTAGTGGACCTGGAATaGCGTCGAGAGGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: QHMRNNTEGCYSSGLYAYLVDLE*RREASG
Trigger: ACCACTCGCCTCTCGACGTCATTCCAGGTCCACTAG...ATATGCATACAGGCCAGAGGAATAACAGCCTTCAGTGTTATTCCTCATGTGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGACCGGCTGCCAGGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFDRLPG*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCCTGGCAGCCGGTC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000187713.7
ENSMUST00000189262.7
ENSMUST00000189570.7
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCAGTTCCTGGCCAACCTaGAGCCGCTTTCCCACATCC +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFSSWPT*SRFPTS
Trigger: GGATGTGGGAAAGCGGCTGCAGGTTGGCCAGGAACT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGALNRS*SLVTSA
Trigger: GGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILALNRS*SLVTSA
Trigger: GGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGC...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTAACACTGTGCCGATTTaGGCCTTGAACCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALANTVPI*ALNRSC
Trigger: GCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTT...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTATGTGGCACAATCTTaGTTAGTGTTAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTYVAQS*LVLESG
Trigger: CCCAGACTCTAACACTAAGCAAGATTGTGCCACATA...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTCAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACAGAGCATTTACTCTCTaGTCCCAGTCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADRAFTL*SQSCLS
Trigger: TGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCT...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGTACAGTTGCTGGTTATGACAGGGATCAGCCGAGGGATGTGAGTGTGCCGAATAGAGCATTTACTCTCTaGTCCCAGTCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: GTVAGYDRDQPRDVSVPNRAFTL*SQSCLS
Trigger: TGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCT...ATTCGGCACACTCACATCCCTCGGCTGATCCCTGTCATAACCAGCAACTGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204904.3
CDS-3UTR GCA 90 bp CAGGACTGCAAAGCAAATGCCATTACTGTCTGGGTCACTTGTCAGTCTCAGGTTCTCTGGATGCAGTGCTaGCAGTGGGACTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: QDCKANAITVWVTCQSQVLWMQC*QWDFFW
Trigger: CCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAG...AACCTGAGACTGACAAGTGACCCAGACAGTAATGGCATTTGCTTTGCAGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTATGTAGAGCCTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLCRASG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGAGCTCTGCCGTCTCGTaGGGATCCGACCTAGGGACG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLSSAVS*GSDLGT
Trigger: CGTCCCTAGGTCGGATCCGCACGAGACGGCAGAGCT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACAGCTCTGCCGTCTCGTaGGGATCCGACCTAGGGACG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSSAVS*GSDLGT
Trigger: CGTCCCTAGGTCGGATCCGCACGAGACGGCAGAGCT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPADSWGS*SVFLRM
Trigger: CATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGTCGGGGGATACGGCTaGTCCGTGCTAATCCAATCC +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTVGGYG*SVLIQS
Trigger: GGATTGGATTAGCACGGAGCAGCCGTATCCCCCGAC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPSVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTTCTTGAGGTGGTTATaGAGGAGTTTGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVFLRWL*RSLVAP
Trigger: TGGTGCCACCAAACTCCTGCATAACCACCTCAAGAA...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAATGTCGACGAGGAGCTaGAGCAAGGACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLMSTRS*SKDSLV
Trigger: CACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACAT...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCATTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPALSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTGCTTGGAGATCCCACACCGGTGTTACTGGAGTTCTTGAGGTGGTTATGCAGTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: IAWRSHTGVTGVLEVVMQLSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...CTGCATAACCACCTCAAGAACTCCAGTAACACCGGTGTGGGATCTCCAAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
CDS-3UTR CCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCATTCAACCGGGACTGTaGCAGTCCTTTCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSIQPGL*QSFLTE
Trigger: CTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAAT...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGAGGATCGGTCTGACTaGGGCAGAGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNEDRSD*GRDTML
Trigger: CAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGAGGATCGGTCTGACTaGGGCAGAGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFEDRSD*GRDTML
Trigger: CAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTTCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGDCRRV*RRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTTACCGGTGGGCCTCTaGAGGAACCCCCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGLPVGL*RNPQQV
Trigger: GACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTATTACCGGTGGGCCTCTaGAGGAACCCCCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILLPVGL*RNPQQV
Trigger: GACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGTGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AAGACATCTCGCCGAAAGAGCCTGCTAGCCTCAGTTCAGTCTGAGCTCCTGGAATGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: KTSRRKSLLASVQSELLEWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...TTCCAGGAGCTCAGACTGAACTGAGGCTAGCAGGCTCTTTCGGCGAGATGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTGCTCAGAGCACACGCTaGAGGCATCACTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALAAQSTR*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGC...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGCTCAGAGCACACGCTaGAGGCATCACTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQAQSTR*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCAATTTACAAAATCTGTaGGGTCCATCTGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGNLQNL*GPSVWL
Trigger: TAGCCAGACAGATGGACCCCACAGATTTTGTAAATT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCAATTTACAAAATCTGTaGGGTCCATCTGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTNLQNL*GPSVWL
Trigger: TAGCCAGACAGATGGACCCCACAGATTTTGTAAATT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGGAGATAGTCCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQGDSPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGACTATCTCC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAGGAGATAGTCCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLGDSPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGACTATCTCC...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCGCCTGAGAGTCTTGTaGGAGGGAGCGGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGRLRVL*EGAVGM
Trigger: CATTCCCACCGCTCCCTCCCACAAGACTCTCAGGCG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGCCACCAGGTCTGAGTaGTCAATGGGCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNATRSE*SMGTSR
Trigger: CCGAGATGTGCCCATTGACCACTCAGACCTGGTGGC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGCCACCAGGTCTGAGTaGTCAATGGGCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTATRSE*SMGTSR
Trigger: CCGAGATGTGCCCATTGACCACTCAGACCTGGTGGC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAGCCACCAGGTCTGAGTaGTCAATGGGCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSATRSE*SMGTSR
Trigger: CCGAGATGTGCCCATTGACCACTCAGACCTGGTGGC...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVSTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCCTCACCACCTCCTTGTaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAG...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSGIRPD*PSPNRS
Trigger: AGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000188710.7
ENSMUST00000189262.7
CDS-3UTR CCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPGIRPD*PSPNRS
Trigger: AGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
3UTR CAA 72 bp AGAGAGTTTAAAGGCCCCGTCCAGAAGACGCAAGTGTaGAAAGAAGTTATCGTACTCAGCAGCCCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: REFKGPVQKTQV*KEVIVLSSPSQ
Trigger: TTGGCTGGGGCTGCTGAGTACGATAACTTCTTTCAACACTTGCGTCTTCTGGACGGGGCCTTTAAACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CAA 72 bp GCTCCCCCATCTCGGGACACGATATCACAATCCTTCTaGCCATCTCGTTTGATTGGCTCATTTAGATCCTCC +
Preference number: 4 (lower is better)
Translates to: APPSRDTISQSF*PSRLIGSFRSS
Trigger: GGAGGATCTAAATGAGCCAATCAAACGAGATGGCAAGAAGGATTGTGATATCGTGTCCCGAGATGGGGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
3UTR CAA 72 bp TTTAAAAGGTTTCAAAGACGATGTGGGGCCACCACATaGTGTCCTCTTTCCTCCTACAGTTGGTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FKRFQRRCGATT*CPLSSYSWCQA
Trigger: GGCCTGGCACCAACTGTAGGAGGAAAGAGGACACAATGTGGTGGCCCCACATCGTCTTTGAAACCTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
3UTR CAA 72 bp GAGAAACAGACTAGCATCTCAGCATCACCTAGGCACTaGCTAGGAATCCATTCTCAGGCTCACCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: EKQTSISASPRH*LGIHSQAHHCS
Trigger: TGAGCAGTGGTGAGCCTGAGAATGGATTCCTAGCAAGTGCCTAGGTGATGCTGAGATGCTAGTCTGTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp AGAGGTACAGTTGCTGGTTATGACAGGGATCAGCCGAGGGATGTGAGTGTGCCGAGACTTCTGTCTGTCTaGGAAATAGTCTATGAGTTC +
Preference number: 4 (lower is better)
Translates to: RGTVAGYDRDQPRDVSVPRLLSV*EIVYEF
Trigger: GAACTCATAGACTATTTCTCAGACAGACAGAAGTCT...CGGCACACTCACATCCCTCGGCTGATCCCTGTCATAACCAGCAACTGTACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
CDS-3UTR TCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCATGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGCTTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAGCTTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGC...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGGAAGAGGATCGGTCTaGCTGGGGCAGAGACACGAT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGGRGSV*LGQRHD
Trigger: ATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CTAGCCTCAGTTCAGTCTGAGCTCCTGGAATCCAAGAAACAAGTCAGTGTCTGTGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: LASVQSELLESKKQVSVCADLDR*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCGATCCAGATCTGC...ACAGACACTGACTTGTTTCTTGGATTCCAGGAGCTCAGACTGAACTGAGGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTATTCCTGGAGCCATATaGGCGCTCAGAGCACACGCT +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSIPGAI*ALRAHA
Trigger: AGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAAT...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAATTCCTGGAGCCATATaGGCGCTCAGAGCACACGCT +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTIPGAI*ALRAHA
Trigger: AGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAAT...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTAACTGGCACAATGGTTaGGAACCTCTGCTACATCTT +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVNWHNG*EPLLHL
Trigger: AAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCAACTGGCACAATGGTTaGGAACCTCTGCTACATCTT +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSNWHNG*EPLLHL
Trigger: AAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTCTCCAAAAACATACTaGAAACTCTCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCSPKTY*KLSCCE
Trigger: CTCACAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTACATCGAGAGCCTTCTaGACTTTTGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVTSRAF*TFACTD
Trigger: ATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVCLSHV*TLWFCS
Trigger: ACTACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGTCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLSCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFSCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGTCAGCCACCAGGTCTaGGTGGTCAATGGGCACATC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGVSHQV*VVNGHI
Trigger: GATGTGCCCATTGACCACTCAGACCTGGTGGCTGAC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGCAGCAGGATGGTCTTaGAGTGCTCCTCCCACACGC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLAAGWS*SAPPTR
Trigger: GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTCTTCCAGAGTCTTCATaGTCGTCAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVLPESS*SSVLHS
Trigger: ACTATGCAGAACTGACGATCATGAAGACTCTGGAAG...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTATTGGACACAGCACTTTaGTGCACTGCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLLDTAL*CTALGG
Trigger: TCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAA...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTGTGAGCTGTGCGAGGTaGGGTTTCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSVSCAR*GFRSSP
Trigger: CGGAGAAGATCTGAAACCTCACCTCGCACAGCTCAC...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGTGAGCTGTGCGAGGTaGGGTTTCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFVSCAR*GFRSSP
Trigger: CGGAGAAGATCTGAAACCTCACCTCGCACAGCTCAC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCATTTCCCACATCCTTCTaGAGCACCTGGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSFPTSF*STWARQ
Trigger: CTGTCTGGCCCAGGTGCTGCAGAAGGATGTGGGAAA...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTTTCCCACATCCTTCTaGAGCACCTGGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFFPTSF*STWARQ
Trigger: CTGTCTGGCCCAGGTGCTGCAGAAGGATGTGGGAAA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNNRVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTT...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQNRVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTT...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTNRVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTT...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLALNRS*SLVTSA
Trigger: GGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNALNRS*SLVTSA
Trigger: GGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAAACACTGTGCCGATTTaGGCCTTGAACCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSNTVPI*ALNRSC
Trigger: GCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTT...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCAACACTGTGCCGATTTaGGCCTTGAACCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFNTVPI*ALNRSC
Trigger: GCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGTATGTGGCACAATCTTaGTTAGTGTTAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLYVAQS*LVLESG
Trigger: CCCAGACTCTAACACTAAGCAAGATTGTGCCACATA...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTATGTGGCACAATCTTaGTTAGTGTTAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADYVAQS*LVLESG
Trigger: CCCAGACTCTAACACTAAGCAAGATTGTGCCACATA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCCAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTAGAACTGATGACAGATaGCCCAATGTGATACAAGCT +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLARTDDR*PNVIQA
Trigger: AGCTTGTATCACATTGGGGCATCTGTCATCAGTTCT...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCCTCTGGATGCAGTGCTaGCAGTGGGACTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTLWMQC*QWDFFW
Trigger: CCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAG...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAAGCCTCTGGATGCAGTaGTGCCAGTGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQSLWMQ*CQWDFF
Trigger: AAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCT...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTTGTAGAGCCTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPCRASG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGGCTTGTATCGCGGCTaGTCTCACGGCTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNGLYRG*SHGWYR
Trigger: GCGATACCAGCCGTGAGAGCAGCCGCGATACAAGCC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGATGTATTTCAGGATTaGTACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGDVFQD*YFDLEV
Trigger: AACCTCAAGGTCAAAGTAGCAATCCTGAAATACATC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCATTCTTGAGGTGGTTATaGAGGAGTTTGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAFLRWL*RSLVAP
Trigger: TGGTGCCACCAAACTCCTGCATAACCACCTCAAGAA...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCATGATCGTCAGTTCTaGATAGTTTTTGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTHDRQF*IVFESC
Trigger: GCAAGATTCAAAAACTATGCAGAACTGACGATCATG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATATGTCGACGAGGAGCTaGAGCAAGGACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNMSTRS*SKDSLV
Trigger: CACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACAT...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTATGTCGACGAGGAGCTaGAGCAAGGACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSMSTRS*SKDSLV
Trigger: CACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACAT...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTTGGCTTTCCGTACACTaGTCTCGGTGTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLWLSVH*SRCCRN
Trigger: GTTACGACAACACCGAGAGCAGTGTACGGAAAGCCA...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGCTCCCCGTGAGCTGTaGGAGGTGAGGTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGAPREL*EVRFQI
Trigger: GATCTGAAACCTCACCTCGCACAGCTCACGGGGAGC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTATCATAGTCCAGCATaGTTGGAGATAGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVYHSPA*LEIVPH
Trigger: ATGGGGGACTATCTCCAAGCATGCTGGACTATGATA...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
CDS-3UTR CCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCTTCTGCAGCACCTaGGCCAGACAGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNSFCST*ARQDSI
Trigger: AATGGAGTCCTGTCTGGCCCAGGTGCTGCAGAAGGA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLLSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTACTCGAACCTGGCTGTTaGGATCTCCCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLLEPGC*DLPVGY
Trigger: GTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAG...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCCTCGAACCTGGCTGTTaGGATCTCCCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTLEPGC*DLPVGY
Trigger: GTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAG...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACTGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAACCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAGAGGATCGGTCTGACTaGGGCAGAGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILEDRSD*GRDTML
Trigger: CAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTC...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGAGGATCGGTCTGACTaGGGCAGAGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGEDRSD*GRDTML
Trigger: CAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACTCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAATCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCTCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGACGCATAGGATCCTaGGGGCAGTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLGRIGS*GQCCCR
Trigger: TCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGACTGTCGGAGGGTGTaGAGGCGACATTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNDCRRV*RRHWWC
Trigger: GCACCACCAATGTCGCCTCCACACCCTCCGACAGTC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLTVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAACTGTGAAACCACTTTaGCGCGACTGCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLETVKPL*RDCGPD
Trigger: GTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGT...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGTTACCGGTGGGCCTCTaGAGGAACCCCCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLLPVGL*RNPQQV
Trigger: GACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCG +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEGIRPD*PSPNRS
Trigger: CGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCTGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCTGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGCTCAGAGCACACGCTaGAGGCATCACTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPAQSTR*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGCTCAGAGCACACGCTaGAGGCATCACTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFAQSTR*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCAAATTGTTGATCAAATaGAAAGGAATCCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAKLLIK*KGIPGD
Trigger: GTCACCAGGGATTCCTTTCCATTTGATCAACAATTT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGAATTTACAAAATCTGTaGGGTCCATCTGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPNLQNL*GPSVWL
Trigger: TAGCCAGACAGATGGACCCCACAGATTTTGTAAATT...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGAATTTACAAAATCTGTaGGGTCCATCTGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTNLQNL*GPSVWL
Trigger: TAGCCAGACAGATGGACCCCACAGATTTTGTAAATT...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCAATTTACAAAATCTGTaGGGTCCATCTGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCNLQNL*GPSVWL
Trigger: TAGCCAGACAGATGGACCCCACAGATTTTGTAAATT...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCTAGTCTTGTTTCGCTaGAATTTACAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLVLFR*NLQNLW
Trigger: CCACAGATTTTGTAAATTCCAGCGAAACAAGACTAG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTAGTCTTGTTTCGCTaGAATTTACAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGLVLFR*NLQNLW
Trigger: CCACAGATTTTGTAAATTCCAGCGAAACAAGACTAG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCTAGTCTTGTTTCGCTaGAATTTACAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTALVLFR*NLQNLW
Trigger: CCACAGATTTTGTAAATTCCAGCGAAACAAGACTAG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCATTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPALVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGGAGATAGTCCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTGDSPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGACTATCTCC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGGAGATAGTCCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPGDSPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGACTATCTCC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGGAGATAGTCCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNGDSPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGACTATCTCC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAGCCACCAGGTCTGAGTaGTCAATGGGCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILATRSE*SMGTSR
Trigger: CCGAGATGTGCCCATTGACCACTCAGACCTGGTGGC...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTTGAATCTTGCTGGCTaGTTTCTCAGAATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLALNLAG*FLRISR
Trigger: ACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAA...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTTGAATCTTGCTGGCTaGTTTCTCAGAATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGLNLAG*FLRISR
Trigger: ACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTTGAATCTTGCTGGCTaGTTTCTCAGAATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFLNLAG*FLRISR
Trigger: ACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGTTGAATCTTGCTGGCTaGTTTCTCAGAATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLLNLAG*FLRISR
Trigger: ACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAA...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTCTCACCACCTCCTTGTaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAG...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AGTAGACAGCACATGAGGAATAACACTGAAGGCTGTTATTCCTCTGGCCTGTATCTCACCACCTCCTTGTaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SRQHMRNNTEGCYSSGLYLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAG...ATACAGGCCAGAGGAATAACAGCCTTCAGTGTTATTCCTCATGTGCTGTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR CCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATCTCACCACCTCCTTGTaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAG...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTCTAAGCAAAACACACTaGCTTTCCGTACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVLSKTH*LSVHCS
Trigger: AGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAG...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGCTTCTTCTTGCTCCTaGCGTCTCCTAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTASSCS*RLLTAE
Trigger: CTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGAAGC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000178710.8
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
3UTR CAA 72 bp CGGGACACGATATCACAATCCTTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCCTCCTGGCTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: RDTISQSFLPSR*IGSFRSSWLRK
Trigger: CTTCCGAAGCCAGGAGGATCTAAATGAGCCAATCAAACGAGATGGCAAGAAGGATTGTGATATCGTGTCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
CDS-3UTR TCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTAGAAGACGCAAGTGTTaGAAGAAGTTATCGTACTCA +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTRRRKC*KKLSYS
Trigger: TGAGTACGATAACTTCTTTCAACACTTGCGTCTTCT...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACAGAAGACGCAAGTGTTaGAAGAAGTTATCGTACTCA +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADRRRKC*KKLSYS
Trigger: TGAGTACGATAACTTCTTTCAACACTTGCGTCTTCT...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPDCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNDCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGAAGAGGATCGGTCTaGCTGGGGCAGAGACACGAT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLGRGSV*LGQRHD
Trigger: ATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAGGAAGAGGATCGGTCTaGCTGGGGCAGAGACACGAT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEGRGSV*LGQRHD
Trigger: ATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCC...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQADLDR*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCGATCCAGATCTGC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTCTCGGCTACATCCCTaGCTCCTGGGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSRLHP*LLGILL
Trigger: GAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCATTCCTGGAGCCATATaGGCGCTCAGAGCACACGCT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGIPGAI*ALRAHA
Trigger: AGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAAT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCCCTGGCTTCGGAAGCTaGACTTTTCAATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTPGFGS*TFQWLL
Trigger: CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGG...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCCTGGCTTCGGAAGCTaGACTTTTCAATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNPGFGS*TFQWLL
Trigger: CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGG...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVSCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGTGGAGGCTGCGTGTTaGGCAGGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLVEAAC*AGRSCC
Trigger: ACAACAAGACCTCCCTGCTCAACACGCAGCCTCCAC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAGTCAGCCACCAGGTCTaGGTGGTCAATGGGCACATC +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEVSHQV*VVNGHI
Trigger: GATGTGCCCATTGACCACTCAGACCTGGTGGCTGAC...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTTGGACACAGCACTTTaGTGCACTGCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNLDTAL*CTALGG
Trigger: TCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAGTGAGCTGTGCGAGGTaGGGTTTCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILVSCAR*GFRSSP
Trigger: CGGAGAAGATCTGAAACCTCACCTCGCACAGCTCAC...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGTGAGCTGTGCGAGGTaGGGTTTCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGVSCAR*GFRSSP
Trigger: CGGAGAAGATCTGAAACCTCACCTCGCACAGCTCAC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTCTCCAAAAACATACTaGAAACTCTTGGACAAGAGC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGSPKTY*KLLDKS
Trigger: GCTCTTGTCCAAGAGTTTTCAGTATGTTTTTGGAGA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000185405.7
CDS-3UTR GCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGTTCCTGGCCAACCTaGAGCCGCTTTCCCACATCC +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLSSWPT*SRFPTS
Trigger: GGATGTGGGAAAGCGGCTGCAGGTTGGCCAGGAACT...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNNRVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTT...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFNRVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEQPSHQ*RQDVHA
Trigger: GGCATGGACATCCTGTCGGCACTGGTGACTAGGCTG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAAACACTGTGCCGATTTaGGCCTTGAACCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILNTVPI*ALNRSC
Trigger: GCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTT...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCTATGTGGCACAATCTTaGTTAGTGTTAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSYVAQS*LVLESG
Trigger: CCCAGACTCTAACACTAAGCAAGATTGTGCCACATA...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCTATGTGGCACAATCTTaGTTAGTGTTAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSYVAQS*LVLESG
Trigger: CCCAGACTCTAACACTAAGCAAGATTGTGCCACATA...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCAGAACTGATGACAGATaGCCCAATGTGATACAAGCT +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSRTDDR*PNVIQA
Trigger: AGCTTGTATCACATTGGGGCATCTGTCATCAGTTCT...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: MELLRGTTNVCSAQTGTASSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATCTCTGGATGCAGTGCTaGCAGTGGGACTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNLWMQC*QWDFFW
Trigger: CCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAG...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATAGCCTCTGGATGCAGTaGTGCCAGTGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNSLWMQ*CQWDFF
Trigger: AAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCT...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTAGCCTCTGGATGCAGTaGTGCCAGTGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPSLWMQ*CQWDFF
Trigger: AAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCT...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTGTAGAGCCTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGCRASG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCGGATCCTGGGGGCAGTaGTGCTGCAGAGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFGSWGQ*CCRAEG
Trigger: GCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCC...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALADSWGS*SVFLRM
Trigger: CATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTC...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPDSWGS*SVFLRM
Trigger: CATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTCTGCTTCCAGGTCAGTaGTGGTACTCAAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALALLPGQ*WYSRLS
Trigger: TGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAG...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLSVSHC*FQVSAG
Trigger: ACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGATGTATTTCAGGATTaGTACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTDVFQD*YFDLEV
Trigger: AACCTCAAGGTCAAAGTAGCAATCCTGAAATACATC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGGATGTATTTCAGGATTaGTACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPDVFQD*YFDLEV
Trigger: AACCTCAAGGTCAAAGTAGCAATCCTGAAATACATC...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACAGGATGGTCTTGAAGTaGTCCTCCCACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNRMVLK*SSHTPR
Trigger: CCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCATAGTTTTTGAATCTTaGTGGCTGGTTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTIVFES*WLVSQN
Trigger: ATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTAT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCATAGTTTTTGAATCTTaGTGGCTGGTTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGIVFES*WLVSQN
Trigger: ATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTAT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCATGTCGACGAGGAGCTaGAGCAAGGACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGMSTRS*SKDSLV
Trigger: CACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACAT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCTGGCTTTCCGTACACTaGTCTCGGTGTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTWLSVH*SRCCRN
Trigger: GTTACGACAACACCGAGAGCAGTGTACGGAAAGCCA...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGCTCCCCGTGAGCTGTaGGAGGTGAGGTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNAPREL*EVRFQI
Trigger: GATCTGAAACCTCACCTCGCACAGCTCACGGGGAGC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCCCAAACCGATCTGACTaGCCAACAGATTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTPNRSD*PTDSAV
Trigger: CACTGCTGAATCTGTTGGGCAGTCAGATCGGTTTGG...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000070989.14
ENSMUST00000188710.7
CDS-3UTR GCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCATATCATAGTCCAGCATaGTTGGAGATAGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAYHSPA*LEIVPH
Trigger: ATGGGGGACTATCTCCAAGCATGCTGGACTATGATA...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
CDS-3UTR CCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTATCCTTCTGCAGCACCTaGGCCAGACAGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILSFCST*ARQDSI
Trigger: AATGGAGTCCTGTCTGGCCCAGGTGCTGCAGAAGGA...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACTCGAACCTGGCTGTTaGGATCTCCCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTLEPGC*DLPVGY
Trigger: GTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAG...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCTCGAACCTGGCTGTTaGGATCTCCCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFLEPGC*DLPVGY
Trigger: GTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAG...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTAGCCTAACAGCTACAACACCAGAAGTAGCCATAATTTTGGCACTGTTCGGGCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: ISLTATTPEVAIILALFGPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...CCCGAACAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGTTAGGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204904.3
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGAGGATCGGTCTGACTaGGGCAGAGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLEDRSD*GRDTML
Trigger: CAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGAGGATCGGTCTGACTaGGGCAGAGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNEDRSD*GRDTML
Trigger: CAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGACTCTCTTGAGAGCTaGAAGAGGATCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTDSLES*KRIGLT
Trigger: AGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAGACTCTCTTGAGAGCTaGAAGAGGATCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLDSLES*KRIGLT
Trigger: AGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTC...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTACTTCCAGGTCAGTGCTaGTACTCAAGACTCTCATGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLLPGQC*YSRLSW
Trigger: CCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAG...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCATGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AGAACTGTCAGGACATCATGTCCCATCATGAAAGTTAGGACACTCACAAAAAGGGCTCAGAGCACACGCTaGAGGCATCACTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: RTVRTSCPIMKVRTLTKRAQSTR*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGC...CCTTTTTGTGAGTGTCCTAACTTTCATGATGGGACATGATGTCCTGACAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGCTCAGAGCACACGCTaGAGGCATCACTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGAQSTR*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCAAATTGTTGATCAAATaGAAAGGAATCCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: VVQTRASMALHFSVPRPCKLLIK*KGIPGD
Trigger: GTCACCAGGGATTCCTTTCCATTTGATCAACAATTT...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGAAATTGTTGATCAAATaGAAAGGAATCCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTKLLIK*KGIPGD
Trigger: GTCACCAGGGATTCCTTTCCATTTGATCAACAATTT...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCAATTTACAAAATCTGTaGGGTCCATCTGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGNLQNL*GPSVWL
Trigger: TAGCCAGACAGATGGACCCCACAGATTTTGTAAATT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTGGTTATGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALAGYAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCATAACC...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAGGTTATGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLGYAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCATAACC...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAGGAGATAGTCCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILGDSPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGACTATCTCC...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCTTGAATCTTGCTGGCTaGTTTCTCAGAATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSLNLAG*FLRISR
Trigger: ACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAA...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACTCACCACCTCCTTGTaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAG...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLGIRPD*PSPNRS
Trigger: AGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEGIRPD*PSPNRS
Trigger: AGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGCTTCTTCTTGCTCCTaGCGTCTCCTAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTASSCS*RLLTAE
Trigger: CTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGAAGC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000178710.8
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCTTCCCTCATGTGTCTaGACTCTAGGGACGCATAGG +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPLPSCV*TLGTHR
Trigger: CCTATGCGTCCCTAGAGTCCAGACACATGAGGGAAG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000189570.7
CDS-3UTR TCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAATGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGAACTGTCAGGACATCATGTCCCATCATGAAAGTTAGGACACTCACAAAAAGGGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: RTVRTSCPIMKVRTLTKRAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...CCTTTTTGTGAGTGTCCTAACTTTCATGATGGGACATGATGTCCTGACAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp TCAGGACTGCAAAGCAAATGCCATTACTGTCTGGGTCACTTGTCAGTCTCAGGTGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 4 (lower is better)
Translates to: SGLQSKCHYCLGHLSVSGAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...ACCTGAGACTGACAAGTGACCCAGACAGTAATGGCATTTGCTTTGCAGTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTAGAAGACGCAAGTGTTaGAAGAAGTTATCGTACTCA +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVRRRKC*KKLSYS
Trigger: TGAGTACGATAACTTCTTTCAACACTTGCGTCTTCT...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCGCTTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGC...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGDCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFADLDR*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCGATCCAGATCTGC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNADLDR*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCGATCCAGATCTGC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGATTCCTGGAGCCATATaGGCGCTCAGAGCACACGCT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLIPGAI*ALRAHA
Trigger: AGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAAT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACATTCCTGGAGCCATATaGGCGCTCAGAGCACACGCT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNIPGAI*ALRAHA
Trigger: AGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAAT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCCCCTCTTTCCGTTCTaGCCAGTTGGAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNPLFPF*PVGTGT
Trigger: TGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCTCTCCAAAAACATACTaGAAACTCTCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSSPKTY*KLSCCE
Trigger: CTCACAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTTGGACACAGCACTTTaGTGCACTGCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGLDTAL*CTALGG
Trigger: TCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGCAAGGACTCCTTGGTaGTCCTCTCCACCACCTTTG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNARTPW*SSPPPL
Trigger: CAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGTGAGCTGTGCGAGGTaGGGTTTCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNVSCAR*GFRSSP
Trigger: CGGAGAAGATCTGAAACCTCACCTCGCACAGCTCAC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAGTGAGCTGTGCGAGGTaGGGTTTCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEVSCAR*GFRSSP
Trigger: CGGAGAAGATCTGAAACCTCACCTCGCACAGCTCAC...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGTGAGCTGTGCGAGGTaGGGTTTCAGATCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLVSCAR*GFRSSP
Trigger: CGGAGAAGATCTGAAACCTCACCTCGCACAGCTCAC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILNRVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTT...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGAACACTGTGCCGATTTaGGCCTTGAACCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLNTVPI*ALNRSC
Trigger: GCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCATATGTGGCACAATCTTaGTTAGTGTTAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAYVAQS*LVLESG
Trigger: CCCAGACTCTAACACTAAGCAAGATTGTGCCACATA...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAGAACTGATGACAGATaGCCCAATGTGATACAAGCT +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPARTDDR*PNVIQA
Trigger: AGCTTGTATCACATTGGGGCATCTGTCATCAGTTCT...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: SKSCALHGLVMSAGGADTSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAGCCTCTGGATGCAGTaGTGCCAGTGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGSLWMQ*CQWDFF
Trigger: AAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGTGTAGAGCCTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLCRASG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATGTAGAGCCTCTGGATaGAGTGCTGCCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLECRASG*SAASGT
Trigger: AGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALAGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNDSWGS*SVFLRM
Trigger: CATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTDSWGS*SVFLRM
Trigger: CATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCTGCTTCCAGGTCAGTaGTGGTACTCAAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPLLPGQ*WYSRLS
Trigger: TGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALAMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGATGTATTTCAGGATTaGTACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADDVFQD*YFDLEV
Trigger: AACCTCAAGGTCAAAGTAGCAATCCTGAAATACATC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACTTCTTGAGGTGGTTATaGAGGAGTTTGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNFLRWL*RSLVAP
Trigger: TGGTGCCACCAAACTCCTGCATAACCACCTCAAGAA...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCATGTCCAAAGCCATCCTaGCTCCTTCTATCTCACTAC +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPCPKPS*LLLSHY
Trigger: GTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACA...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCCATGATCGTCAGTTCTaGATAGTTTTTGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGHDRQF*IVFESC
Trigger: GCAAGATTCAAAAACTATGCAGAACTGACGATCATG...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAATGTCGACGAGGAGCTaGAGCAAGGACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEMSTRS*SKDSLV
Trigger: CACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACAT...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTGGCTTTCCGTACACTaGTCTCGGTGTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFWLSVH*SRCCRN
Trigger: GTTACGACAACACCGAGAGCAGTGTACGGAAAGCCA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTCACAGGCTTCTTCTTaGTCCTGGCGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFSQASS*SWRLLT
Trigger: TGTTAGGAGACGCCAGGAGCAAGAAGAAGCCTGTGA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000178710.8
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCACAGGCTTCTTCTTaGTCCTGGCGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNSQASS*SWRLLT
Trigger: TGTTAGGAGACGCCAGGAGCAAGAAGAAGCCTGTGA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000178710.8
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACATTCTCACAGGCTTCTTaGTCCTGGCGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTFSQAS*SWRLLT
Trigger: TGTTAGGAGACGCCAGGAGCAAGAAGCCTGTGAGAA...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000187713.7
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFLSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCTCGAACCTGGCTGTTaGGATCTCCCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGLEPGC*DLPVGY
Trigger: GTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGACTCTCTTGAGAGCTaGAAGAGGATCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPDSLES*KRIGLT
Trigger: AGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGACTCTCTTGAGAGCTaGAAGAGGATCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFDSLES*KRIGLT
Trigger: AGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTATCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACTTCCAGGTCAGTGCTaGTACTCAAGACTCTCATGG +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTLPGQC*YSRLSW
Trigger: CCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAG...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGCTCAGAGCACACGCTaGAGGCATCACTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNAQSTR*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAGCTCAGAGCACACGCTaGAGGCATCACTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEAQSTR*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGC...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCAAATTGTTGATCAAATaGAAAGGAATCCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFKLLIK*KGIPGD
Trigger: GTCACCAGGGATTCCTTTCCATTTGATCAACAATTT...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCAAATTGTTGATCAAATaGAAAGGAATCCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGKLLIK*KGIPGD
Trigger: GTCACCAGGGATTCCTTTCCATTTGATCAACAATTT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCAATTTACAAAATCTGTaGGGTCCATCTGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSNLQNL*GPSVWL
Trigger: TAGCCAGACAGATGGACCCCACAGATTTTGTAAATT...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCTAGTCTTGTTTCGCTaGAATTTACAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADLVLFR*NLQNLW
Trigger: CCACAGATTTTGTAAATTCCAGCGAAACAAGACTAG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTCTAGTCTTGTTTCGCTaGAATTTACAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLALVLFR*NLQNLW
Trigger: CCACAGATTTTGTAAATTCCAGCGAAACAAGACTAG...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCTAGTCTTGTTTCGCTaGAATTTACAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTLVLFR*NLQNLW
Trigger: CCACAGATTTTGTAAATTCCAGCGAAACAAGACTAG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGGTTATGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNGYAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCATAACC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTATCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLSTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAATCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQSTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCTTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTLWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCATTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPLWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCTCACCACCTCCTTGTaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACATGCACTGCTCTGGGTaGATTGAGCTGGCTAGCGTG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNMHCSG*IELASV
Trigger: CACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCAT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
3UTR CAA 72 bp CGAGATCGCTGGAGAGATCCTGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCTTTAATGGAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: RDRWRDPVVDTD*VLTVEPLMEKQ
Trigger: TTGCTTCTCCATTAAAGGCTCTACAGTTAGTACCAAATCTGTGTCGACGACAGGATCTCTCCAGCGATCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190733.7
3UTR CAA 72 bp ATTCACATTAAAAAGGTGAACGCAGTAATGTGGTACTaGTCCCAGTGCTGGGGAAGTGGAGGCAGTCAGATC +
Preference number: 4 (lower is better)
Translates to: IHIKKVNAVMWY*SQCWGSGGSQI
Trigger: GATCTGACTGCCTCCACTTCCCCAGCACTGGGACAAGTACCACATTACTGCGTTCACCTTTTTAATGTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGCAGTCCTTTCTTACTaGGGTCTGCCCTCACACGTT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLAVLSY*GLPSHV
Trigger: AACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGACTTAGAGGTACAGTTGCTGGTTATGACAGGGATCAGCCGAGGGATGTGAGTAGAAGACGCAAGTGTTaGAAGAAGTTATCGTACTCA +
Preference number: 4 (lower is better)
Translates to: RLRGTVAGYDRDQPRDVSRRRKC*KKLSYS
Trigger: TGAGTACGATAACTTCTTTCAACACTTGCGTCTTCT...ACTCACATCCCTCGGCTGATCCCTGTCATAACCAGCAACTGTACCTCTAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204904.3
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNDCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGACTGTAGGGCCTTCTaGTACGAGGACTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLDCRAF*YEDSKV
Trigger: CACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILADLDR*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCGATCCAGATCTGC...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGADLDR*DCETTL
Trigger: CAAAGTGGTTTCACAGTCTCAGCGATCCAGATCTGC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAAACTGGCACAATGGTTaGGAACCTCTGCTACATCTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLNWHNG*EPLLHL
Trigger: AAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTAACTGGCACAATGGTTaGGAACCTCTGCTACATCTT +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALANWHNG*EPLLHL
Trigger: AAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCATCTCCAAAAACATACTaGAAACTCTCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GSSFLSPQALLPLHSIPASPKTY*KLSCCE
Trigger: CTCACAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTACATCGAGAGCCTTCTaGACTTTTGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: TPKSVWTEKYATVYQALATSRAF*TFACTD
Trigger: ATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACGTTCAAACAGAGAGATaGGCACAATTTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNVQTER*AQFVLP
Trigger: AGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAAC...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGTTCAAACAGAGAGATaGGCACAATTTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTVQTER*AQFVLP
Trigger: AGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAAC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTTGGACACAGCACTTTaGTGCACTGCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNLDTAL*CTALGG
Trigger: TCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGTTGGACACAGCACTTTaGTGCACTGCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLLDTAL*CTALGG
Trigger: TCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAA...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTCAGCAATCTTGCTGTaGGGGTCGGCAAACATTCGG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSAILL*GSANIR
Trigger: CCGAATGTTTGCCGACCCTCACAGCAAGATTGCTGA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000185405.7
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLNRVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNNRVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLENRVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTT...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCAGAGCATTTACTCTCTaGTCCCAGTCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTRAFTL*SQSCLS
Trigger: TGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCT...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: DSKSCALHGLVMSAGGADSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAGTGGTACAGGTGTTCTaGTTCTCGGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILVVQVF*FSAEVT
Trigger: AGTCACTTCAGCCGAGAAGCAGAACACCTGTACCAC...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGTGGTACAGGTGTTCTaGTTCTCGGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGVVQVF*FSAEVT
Trigger: AGTCACTTCAGCCGAGAAGCAGAACACCTGTACCAC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGGGCAGAGACACGATaGTGTCCGAGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLGAETR*CPSSSS
Trigger: ACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCTCTGGATGCAGTGCTaGCAGTGGGACTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNLWMQC*QWDFFW
Trigger: CCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACAGCCTCTGGATGCAGTaGTGCCAGTGGGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSLWMQ*CQWDFF
Trigger: AAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp AGAACTGTCAGGACATCATGTCCCATCATGAAAGTTAGGACACTCACAAAAAGGGACTCCTGGGGATCTTaGTCCGTTTTTCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: RTVRTSCPIMKVRTLTKRDSWGS*SVFLRM
Trigger: CATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTC...CCTTTTTGTGAGTGTCCTAACTTTCATGATGGGACATGATGTCCTGACAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR GCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCGTCGGGGGATACGGCTaGTCCGTGCTAATCCAATCC +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFVGGYG*SVLIQS
Trigger: GGATTGGATTAGCACGGAGCAGCCGTATCCCCCGAC...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACATTCTTGAGGTGGTTATaGAGGAGTTTGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTFLRWL*RSLVAP
Trigger: TGGTGCCACCAAACTCCTGCATAACCACCTCAAGAA...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACATGTCCAAAGCCATCCTaGCTCCTTCTATCTCACTAC +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTCPKPS*LLLSHY
Trigger: GTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACA...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCATAGTTTTTGAATCTTaGTGGCTGGTTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: VQTRASMALHFSVPRPCFIVFES*WLVSQN
Trigger: ATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTAT...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTATAGTTTTTGAATCTTaGTGGCTGGTTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAIVFES*WLVSQN
Trigger: ATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTAT...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCGCTCCCCGTGAGCTGTaGGAGGTGAGGTTTCAGATC +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFAPREL*EVRFQI
Trigger: GATCTGAAACCTCACCTCGCACAGCTCACGGGGAGC...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGLSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCTCGAACCTGGCTGTTaGGATCTCCCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNLEPGC*DLPVGY
Trigger: GTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACTCGAACCTGGCTGTTaGGATCTCCCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLELEPGC*DLPVGY
Trigger: GTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCATTCAACCGGGACTGTaGCAGTCCTTTCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFIQPGL*QSFLTE
Trigger: CTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAAT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGTGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGTCACTTCGAGATCGCTaGAGAGATCCTGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLSLRDR*RDPVVD
Trigger: GTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGA...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGGTTATGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGGYAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCATAACC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFSTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTTCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPSTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNSTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACATTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTLWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTACTAAGCAAAACACACTaGCTTTCCGTACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLLSKTH*LSVHCS
Trigger: AGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAG...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFGIRPD*PSPNRS
Trigger: AGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCC...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
CDS-3UTR CCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGCTTCTTCTTGCTCCTaGCGTCTCCTAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLASSCS*RLLTAE
Trigger: CTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGAAGC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000178710.8
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
3UTR CAA 72 bp GGTGAGGTTTCAGATCTTCTCCGATTACGGAATAGATaGCCACTAAGCAAAACACACTGGCTTTCCGTACAC +
Preference number: 4 (lower is better)
Translates to: GEVSDLLRLRNR*PLSKTHWLSVH
Trigger: GTGTACGGAAAGCCAGTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCGGAGAAGATCTGAAACCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204325.2
CDS-3UTR TCA 90 bp CAGGACTGCAAAGCAAATGCCATTACTGTCTGGGTCACTTGTCAGTCTCAGGTTGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: QDCKANAITVWVTCQSQVVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...AACCTGAGACTGACAAGTGACCCAGACAGTAATGGCATTTGCTTTGCAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCGTTCTGCTTCTCGGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFVLLLG*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAAC...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTAACTGGCACAATGGTTaGGAACCTCTGCTACATCTT +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSNWHNG*EPLLHL
Trigger: AAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCAACTGGCACAATGGTTaGGAACCTCTGCTACATCTT +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFNWHNG*EPLLHL
Trigger: AAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTTCTCCAAAAACATACTaGAAACTCTCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLSPKTY*KLSCCE
Trigger: CTCACAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTACATCGAGAGCCTTCTaGACTTTTGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPTSRAF*TFACTD
Trigger: ATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATACATCGAGAGCCTTCTaGACTTTTGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNTSRAF*TFACTD
Trigger: ATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGTTCAAACAGAGAGATaGGCACAATTTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNVQTER*AQFVLP
Trigger: AGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAAC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGTTCAAACAGAGAGATaGGCACAATTTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTVQTER*AQFVLP
Trigger: AGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAAC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGTTCAAACAGAGAGATaGGCACAATTTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPVQTER*AQFVLP
Trigger: AGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAAC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGTAGACAGCACATGAGGAATAACACTGAAGGCTGTTATTCCTCTGGCCTGTATTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SRQHMRNNTEGCYSSGLYCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...ATACAGGCCAGAGGAATAACAGCCTTCAGTGTTATTCCTCATGTGCTGTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCCTGGCTTCGGAAGCTaGACTTTTCAATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNPGFGS*TFQWLL
Trigger: CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACCTGGCTTCGGAAGCTaGACTTTTCAATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEPGFGS*TFQWLL
Trigger: CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAATCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQSCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCTTCCAGAGTCTTCATaGTCGTCAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFLPESS*SSVLHS
Trigger: ACTATGCAGAACTGACGATCATGAAGACTCTGGAAG...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCTTCCAGAGTCTTCATaGTCGTCAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPLPESS*SSVLHS
Trigger: ACTATGCAGAACTGACGATCATGAAGACTCTGGAAG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCTCTCCAAAAACATACTaGAAACCTTGCTGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTSPKTY*KPCCEG
Trigger: ACCCTCACAGCAAGGTTTTCAGTATGTTTTTGGAGA...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000178710.8
CDS-3UTR GCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCATATGTGGCACAATCTTaGTTAGTGTTAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPYVAQS*LVLESG
Trigger: CCCAGACTCTAACACTAAGCAAGATTGTGCCACATA...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCACAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: YQALARELWILRAVPSMVSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGTGGTACAGGTGTTCTaGTTCTCGGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLVVQVF*FSAEVT
Trigger: AGTCACTTCAGCCGAGAAGCAGAACACCTGTACCAC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCTGCTTCCAGGTCAGTaGTGGTACTCAAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLLLPGQ*WYSRLS
Trigger: TGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTGTCCAAAGCCATCCTaGCTCCTTCTATCTCACTAC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGCPKPS*LLLSHY
Trigger: GTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCATAGTTTTTGAATCTTaGTGGCTGGTTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSIVFES*WLVSQN
Trigger: ATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTAT...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCATGTCGACGAGGAGCTaGAGCAAGGACTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFMSTRS*SKDSLV
Trigger: CACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACAT...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATGGCTTTCCGTACACTaGTCTCGGTGTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEWLSVH*SRCCRN
Trigger: GTTACGACAACACCGAGAGCAGTGTACGGAAAGCCA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGTGGCTTTCCGTACACTaGTCTCGGTGTTGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLWLSVH*SRCCRN
Trigger: GTTACGACAACACCGAGAGCAGTGTACGGAAAGCCA...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACATCTTTTCTTTTTCTGTaGCCCTTACCAGAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTSFLFL*PLPERQ
Trigger: CTGACGCTCTGGTAAGGGGCACAGAAAAAGAAAAGA...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000070989.14
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTATCATAGTCCAGCATaGTTGGAGATAGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFYHSPA*LEIVPH
Trigger: ATGGGGGACTATCTCCAAGCATGCTGGACTATGATA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTATCATAGTCCAGCATaGTTGGAGATAGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNYHSPA*LEIVPH
Trigger: ATGGGGGACTATCTCCAAGCATGCTGGACTATGATA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNLSNRV*SCSRSA
Trigger: TGCTGACCTTGAGCACGACCAGACCCTGTTGGATAA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp ACAGCTACAACACCAGAAGTAGCCATAATTTTGGCACTGTTCGGGATTAAATTATGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TATTPEVAIILALFGIKLWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...TAATTTAATCCCGAACAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204904.3
CDS-3UTR CCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGCCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACCCAGTAGCACTTCCTaGCTTCTATTCTCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEPSSTS*LLFSLQ
Trigger: CTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGACTCTCTTGAGAGCTaGAAGAGGATCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLDSLES*KRIGLT
Trigger: AGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLERRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCTTCCAGGTCAGTGCTaGTACTCAAGACTCTCATGG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLLPGQC*YSRLSW
Trigger: CCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACTTCCAGGTCAGTGCTaGTACTCAAGACTCTCATGG +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLELPGQC*YSRLSW
Trigger: CCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTTGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGGTTATGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNGYAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCATAACC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGTTATGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLGYAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCATAACC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAGGTTATGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEGYAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCATAACC...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTATCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILSTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGSTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
3UTR CAA 72 bp TGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTaGCTTCCGTTACATTCAATACCAGCAAAATTCTAC +
Preference number: 4 (lower is better)
Translates to: CKYGSSFLSPQA*LPLHSIPAKFY
Trigger: GTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
CDS-3UTR TCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGCTGAGAAATAGTCTATaGGTTCCTGGCCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLLRNSL*VPGQPA
Trigger: TGCAGGTTGGCCAGGAACTCATAGACTATTTCTCAG...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACAGACTTCTGTCTGTCTaGGAAATAGTCTATGAGTTC +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNRLLSV*EIVYEF
Trigger: GAACTCATAGACTATTTCTCAGACAGACAGAAGTCT...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAAGACTTCTGTCTGTCTaGGAAATAGTCTATGAGTTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLRLLSV*EIVYEF
Trigger: GAACTCATAGACTATTTCTCAGACAGACAGAAGTCT...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAAGACTTCTGTCTGTCTaGGAAATAGTCTATGAGTTC +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPRLLSV*EIVYEF
Trigger: GAACTCATAGACTATTTCTCAGACAGACAGAAGTCT...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAAGAAGACGCAAGTGTTaGAAGAAGTTATCGTACTCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLRRRKC*KKLSYS
Trigger: TGAGTACGATAACTTCTTTCAACACTTGCGTCTTCT...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACAGAAGACGCAAGTGTTaGAAGAAGTTATCGTACTCA +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNRRRKC*KKLSYS
Trigger: TGAGTACGATAACTTCTTTCAACACTTGCGTCTTCT...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAAACTGGCACAATGGTTaGGAACCTCTGCTACATCTT +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILNWHNG*EPLLHL
Trigger: AAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGGCACAATGGTTaGGAACCTCTGCTACATCTT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGNWHNG*EPLLHL
Trigger: AAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACTCTCCAAAAACATACTaGAAACTCTCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNSPKTY*KLSCCE
Trigger: CTCACAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCACATCGAGAGCCTTCTaGACTTTTGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGTSRAF*TFACTD
Trigger: ATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGCLSHV*TLWFCS
Trigger: ACTACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGTTCAAACAGAGAGATaGGCACAATTTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGVQTER*AQFVLP
Trigger: AGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAAC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTATGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFSCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNSCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFNRVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTT...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTAGAACTGATGACAGATaGCCCAATGTGATACAAGCT +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSRTDDR*PNVIQA
Trigger: AGCTTGTATCACATTGGGGCATCTGTCATCAGTTCT...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACATGGTTGAGAACCTCTaGTACATCTTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNMVENL*YIFSLP
Trigger: CGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCAT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTTCTTGAGGTGGTTATaGAGGAGTTTGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNFLRWL*RSLVAP
Trigger: TGGTGCCACCAAACTCCTGCATAACCACCTCAAGAA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGTGTCCAAAGCCATCCTaGCTCCTTCTATCTCACTAC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLCPKPS*LLLSHY
Trigger: GTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACA...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTATCATAGTCCAGCATaGTTGGAGATAGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGYHSPA*LEIVPH
Trigger: ATGGGGGACTATCTCCAAGCATGCTGGACTATGATA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGATTCAACCGGGACTGTaGCAGTCCTTTCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLIQPGL*QSFLTE
Trigger: CTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAAT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCTGGATGATGAGGAGCTaGCAGAAGAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFWMMRS*QKKACC
Trigger: GCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCA...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCCCTCGAGGTCTCGGCTaGAGTAAATCTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFPRGLG*SKSALQ
Trigger: CTGTAGTGCAGATTTACTCCAGCCGAGACCTCGAGG...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAAATTTACAAAATCTGTaGGGTCCATCTGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPNLQNL*GPSVWL
Trigger: TAGCCAGACAGATGGACCCCACAGATTTTGTAAATT...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLELVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTCCACACGCTCGTTGTaGTTAGATAGCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSTRSL*LDSSFS
Trigger: GCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTTTGAATCTTGCTGGCTaGTTTCTCAGAATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSLNLAG*FLRISR
Trigger: ACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAA...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACATTGAATCTTGCTGGCTaGTTTCTCAGAATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTLNLAG*FLRISR
Trigger: ACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAA...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLELWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCTAAGCAAAACACACTaGCTTTCCGTACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGLSKTH*LSVHCS
Trigger: AGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGCCTTCTTTTGCAGCTaGAGACTTAGATCCAAGACT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLAFFCS*RLRSKT
Trigger: AGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAAACTGGCACAATGGTTaGGAACCTCTGCTACATCTT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLENWHNG*EPLLHL
Trigger: AAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTTCTCCAAAAACATACTaGAAACTCTCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSSPKTY*KLSCCE
Trigger: CTCACAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAACATCGAGAGCCTTCTaGACTTTTGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLETSRAF*TFACTD
Trigger: ATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGACATCGAGAGCCTTCTaGACTTTTGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLTSRAF*TFACTD
Trigger: ATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLCLSHV*TLWFCS
Trigger: ACTACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLCLSHV*TLWFCS
Trigger: ACTACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGTTCAAACAGAGAGATaGGCACAATTTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLVQTER*AQFVLP
Trigger: AGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAAC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAGTTCAAACAGAGAGATaGGCACAATTTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEVQTER*AQFVLP
Trigger: AGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAAC...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCCCTGGCTTCGGAAGCTaGACTTTTCAATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFPGFGS*TFQWLL
Trigger: CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGG...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGSCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCTTCCAGAGTCTTCATaGTCGTCAGTTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLLPESS*SSVLHS
Trigger: ACTATGCAGAACTGACGATCATGAAGACTCTGGAAG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAGAACTGATGACAGATaGCCCAATGTGATACAAGCT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGRTDDR*PNVIQA
Trigger: AGCTTGTATCACATTGGGGCATCTGTCATCAGTTCT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAAGAACTGATGACAGATaGCCCAATGTGATACAAGCT +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILRTDDR*PNVIQA
Trigger: AGCTTGTATCACATTGGGGCATCTGTCATCAGTTCT...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCCTGCTTCCAGGTCAGTaGTGGTACTCAAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFLLPGQ*WYSRLS
Trigger: TGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAG...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGATGTATTTCAGGATTaGTACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQDVFQD*YFDLEV
Trigger: AACCTCAAGGTCAAAGTAGCAATCCTGAAATACATC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCCATGATCGTCAGTTCTaGATAGTTTTTGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTHDRQF*IVFESC
Trigger: GCAAGATTCAAAAACTATGCAGAACTGACGATCATG...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTACATGATCGTCAGTTCTaGATAGTTTTTGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLHDRQF*IVFESC
Trigger: GCAAGATTCAAAAACTATGCAGAACTGACGATCATG...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTATCATAGTCCAGCATaGTTGGAGATAGTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNYHSPA*LEIVPH
Trigger: ATGGGGGACTATCTCCAAGCATGCTGGACTATGATA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGTGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAAAATTGTTGATCAAATaGAAAGGAATCCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: GDKPVALPAHMLKASSEPKLLIK*KGIPGD
Trigger: GTCACCAGGGATTCCTTTCCATTTGATCAACAATTT...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAAATTTACAAAATCTGTaGGGTCCATCTGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTNLQNL*GPSVWL
Trigger: TAGCCAGACAGATGGACCCCACAGATTTTGTAAATT...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAACTAGTCTTGTTTCGCTaGAATTTACAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQLVLFR*NLQNLW
Trigger: CCACAGATTTTGTAAATTCCAGCGAAACAAGACTAG...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCCTAGTCTTGTTTCGCTaGAATTTACAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: THTEPSFSVSISHGFSPTLVLFR*NLQNLW
Trigger: CCACAGATTTTGTAAATTCCAGCGAAACAAGACTAG...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AGAACTGTCAGGACATCATGTCCCATCATGAAAGTTAGGACACTCACAAAAAGGTTGAATCTTGCTGGCTaGTTTCTCAGAATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: RTVRTSCPIMKVRTLTKRLNLAG*FLRISR
Trigger: ACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAA...CCTTTTTGTGAGTGTCCTAACTTTCATGATGGGACATGATGTCCTGACAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACTAAGCAAAACACACTaGCTTTCCGTACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLELSKTH*LSVHCS
Trigger: AGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCTAAGCAAAACACACTaGCTTTCCGTACACTGCTCT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNLSKTH*LSVHCS
Trigger: AGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
3UTR CAA 72 bp TTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTaGAGAACTCTAAGATACACCCTAAAGAACACACAA +
Preference number: 4 (lower is better)
Translates to: LSSFSCPDCSST*RTLRYTLKNTQ
Trigger: TTGTGTGTTCTTTAGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000204325.2
3UTR CAA 72 bp TACAGTCACCTTTTCTTTAATGCAACCATGAGAACTTaGGTGGCATTACTGATTCTATTCCCAAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: YSHLFFNATMRT*VALLILFPRQG
Trigger: TCCCTGCCTTGGGAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTGACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
ENSMUST00000204325.2
CDS-3UTR TCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAAGACTTCTGTCTGTCTaGGAAATAGTCTATGAGTTC +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILRLLSV*EIVYEF
Trigger: GAACTCATAGACTATTTCTCAGACAGACAGAAGTCT...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAGACTTCTGTCTGTCTaGGAAATAGTCTATGAGTTC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGRLLSV*EIVYEF
Trigger: GAACTCATAGACTATTTCTCAGACAGACAGAAGTCT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAAGAAGACGCAAGTGTTaGAAGAAGTTATCGTACTCA +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILRRRKC*KKLSYS
Trigger: TGAGTACGATAACTTCTTTCAACACTTGCGTCTTCT...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATCTTGCCATCTCGTTTaGTTGGCTCATTTAGATCCT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLESCHLV*LAHLDP
Trigger: AGGATCTAAATGAGCCAATCAAACGAGATGGCAAGA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGTTCTGCATAGTTTTTaGATCTTGCTGGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNVLHSF*ILLAGF
Trigger: GAAACCAGCCAGCAAGATTCAAAAACTATGCAGAAC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTATGTGGCACAATCTTaGTTAGTGTTAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNYVAQS*LVLESG
Trigger: CCCAGACTCTAACACTAAGCAAGATTGTGCCACATA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp ACAGCTACAACACCAGAAGTAGCCATAATTTTGGCACTGTTCGGGATTAAATTACAGAAGAAGGCCTGTTaGCATCCACAGAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: TATTPEVAIILALFGIKLQKKAC*HPQNLH
Trigger: ATGAAGATTCTGTGGATGGCAACAGGCCTTCTTCTG...TAATTTAATCCCGAACAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204904.3
CDS-3UTR GCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAAGAACTGATGACAGATaGCCCAATGTGATACAAGCT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLERTDDR*PNVIQA
Trigger: AGCTTGTATCACATTGGGGCATCTGTCATCAGTTCT...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGATGTATTTCAGGATTaGTACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTDVFQD*YFDLEV
Trigger: AACCTCAAGGTCAAAGTAGCAATCCTGAAATACATC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTGATGTATTTCAGGATTaGTACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSDVFQD*YFDLEV
Trigger: AACCTCAAGGTCAAAGTAGCAATCCTGAAATACATC...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCTTCTTGAGGTGGTTATaGAGGAGTTTGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFFLRWL*RSLVAP
Trigger: TGGTGCCACCAAACTCCTGCATAACCACCTCAAGAA...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATCATGATCGTCAGTTCTaGATAGTTTTTGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNHDRQF*IVFESC
Trigger: GCAAGATTCAAAAACTATGCAGAACTGACGATCATG...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCATGATCGTCAGTTCTaGATAGTTTTTGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPHDRQF*IVFESC
Trigger: GCAAGATTCAAAAACTATGCAGAACTGACGATCATG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCATTCAACCGGGACTGTaGCAGTCCTTTCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFIQPGL*QSFLTE
Trigger: CTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAAT...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCGAGGACTCCAAAGTGTaGTACAGGTGTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFEDSKV*YRCSAS
Trigger: AGAAGCAGAACACCTGTACCACACTTTGGAGTCCTC...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAAAATTGTTGATCAAATaGAAAGGAATCCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTKLLIK*KGIPGD
Trigger: GTCACCAGGGATTCCTTTCCATTTGATCAACAATTT...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATAAATTGTTGATCAAATaGAAAGGAATCCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNKLLIK*KGIPGD
Trigger: GTCACCAGGGATTCCTTTCCATTTGATCAACAATTT...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCAAATTGTTGATCAAATaGAAAGGAATCCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFKLLIK*KGIPGD
Trigger: GTCACCAGGGATTCCTTTCCATTTGATCAACAATTT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCTAGTCTTGTTTCGCTaGAATTTACAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPLVLFR*NLQNLW
Trigger: CCACAGATTTTGTAAATTCCAGCGAAACAAGACTAG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGTTGAATCTTGCTGGCTaGTTTCTCAGAATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLLNLAG*FLRISR
Trigger: ACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAA...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATTGAATCTTGCTGGCTaGTTTCTCAGAATTTCCCGT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLELNLAG*FLRISR
Trigger: ACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCTTGTGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFLWESL*ASRVFM
Trigger: CATGAAGACTCTGGAAGCCCACAAAGACTCCCACAA...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGAGACTTCTGTCTGTCTaGGAAATAGTCTATGAGTTC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLRLLSV*EIVYEF
Trigger: GAACTCATAGACTATTTCTCAGACAGACAGAAGTCT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR TCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGAGAAGACGCAAGTGTTaGAAGAAGTTATCGTACTCA +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLRRRKC*KKLSYS
Trigger: TGAGTACGATAACTTCTTTCAACACTTGCGTCTTCT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTCTCCAAAAACATACTaGAAACTCTCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSPKTY*KLSCCE
Trigger: CTCACAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGTCTCCAAAAACATACTaGAAACTCTCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLSPKTY*KLSCCE
Trigger: CTCACAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCTGTTACTGGAGTTCTTaGGGTGGTTATGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFCYWSS*GGYAGV
Trigger: AACTCCTGCATAACCACCTCAAGAACTCCAGTAACA...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCAGAGCATTTACTCTCTaGTCCCAGTCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFRAFTL*SQSCLS
Trigger: TGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCT...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACATCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAATAGTTTTTGAATCTTaGTGGCTGGTTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTIVFES*WLVSQN
Trigger: ATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTAT...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTATAGTTTTTGAATCTTaGTGGCTGGTTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: FVCTVRMSGNALELFGYSIVFES*WLVSQN
Trigger: ATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTAT...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAATAGTTTTTGAATCTTaGTGGCTGGTTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSIVFES*WLVSQN
Trigger: ATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTAT...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCATAGTTTTTGAATCTTaGTGGCTGGTTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFIVFES*WLVSQN
Trigger: ATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTAT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCATGATCGTCAGTTCTaGATAGTTTTTGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGHDRQF*IVFESC
Trigger: GCAAGATTCAAAAACTATGCAGAACTGACGATCATG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACATGATCGTCAGTTCTaGATAGTTTTTGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: ISQSPGLASVTFNTSKILHDRQF*IVFESC
Trigger: GCAAGATTCAAAAACTATGCAGAACTGACGATCATG...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCTGGAGGCATCACTGTTaGCATCATCATCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFWRHHC*HHHQST
Trigger: TGTACTCTGATGATGATGCCAACAGTGATGCCTCCA...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGAATTTACAAAATCTGTaGGGTCCATCTGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLNLQNL*GPSVWL
Trigger: TAGCCAGACAGATGGACCCCACAGATTTTGTAAATT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACAATTTACAAAATCTGTaGGGTCCATCTGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNNLQNL*GPSVWL
Trigger: TAGCCAGACAGATGGACCCCACAGATTTTGTAAATT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCTAGTCTTGTTTCGCTaGAATTTACAAAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGLVLFR*NLQNLW
Trigger: CCACAGATTTTGTAAATTCCAGCGAAACAAGACTAG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
3UTR CAA 72 bp AGCCTAACAGCTACAACACCAGAAGTAGCCATAATTTaGGCACTGTTCGGGATTAAATTAAAGATAGTTGGC +
Preference number: 4 (lower is better)
Translates to: SLTATTPEVAII*ALFGIKLKIVG
Trigger: GCCAACTATCTTTAATTTAATCCCGAACAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGTTAGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000190733.7
ENSMUST00000204904.3
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGATGTATTTCAGGATTaGTACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLDVFQD*YFDLEV
Trigger: AACCTCAAGGTCAAAGTAGCAATCCTGAAATACATC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAGATGTATTTCAGGATTaGTACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEDVFQD*YFDLEV
Trigger: AACCTCAAGGTCAAAGTAGCAATCCTGAAATACATC...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGATGTATTTCAGGATTaGTACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNDVFQD*YFDLEV
Trigger: AACCTCAAGGTCAAAGTAGCAATCCTGAAATACATC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCATAGTTTTTGAATCTTaGTGGCTGGTTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGIVFES*WLVSQN
Trigger: ATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTAT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCATGATCGTCAGTTCTaGATAGTTTTTGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNHDRQF*IVFESC
Trigger: GCAAGATTCAAAAACTATGCAGAACTGACGATCATG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCATGATCGTCAGTTCTaGATAGTTTTTGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLHDRQF*IVFESC
Trigger: GCAAGATTCAAAAACTATGCAGAACTGACGATCATG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAAATTGTTGATCAAATaGAAAGGAATCCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLKLLIK*KGIPGD
Trigger: GTCACCAGGGATTCCTTTCCATTTGATCAACAATTT...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CCA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACAAATTGTTGATCAAATaGAAAGGAATCCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNKLLIK*KGIPGD
Trigger: GTCACCAGGGATTCCTTTCCATTTGATCAACAATTT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR TCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLESSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR GCA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGATAGTTTTTGAATCTTaGTGGCTGGTTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLIVFES*WLVSQN
Trigger: ATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTAT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR GCA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGATAGTTTTTGAATCTTaGTGGCTGGTTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLIVFES*WLVSQN
Trigger: ATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTAT...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR TCA 90 bp GTAGCCATAATTTTGGCACTGTTCGGGATTAAATTAAAGATAGTTGGCATAATGGTCATGCTTGTCATCTaGCAGGATTTCTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: VAIILALFGIKLKIVGIMVMLVI*QDFSDF
Trigger: AAAATCAGAGAAATCCTGTCAGATGACAAGCATGAC...CATTATGCCAACTATCTTTAATTTAATCCCGAACAGTGCCAAAATTATGGCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204904.3
CDS-3UTR GCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCGATGTATTTCAGGATTaGTACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFDVFQD*YFDLEV
Trigger: AACCTCAAGGTCAAAGTAGCAATCCTGAAATACATC...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR GCA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCCATGATCGTCAGTTCTaGATAGTTTTTGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: HLFFNATMRTLVALLILFHDRQF*IVFESC
Trigger: GCAAGATTCAAAAACTATGCAGAACTGACGATCATG...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS CCA 90 bp CGCGACTGCGGCCCCGACTGTCGGAGGGTGTGGAGGCGACATTGGTaGTGCTCCCCGAGCTCTGCCGTCTCGTGCGGATCCGACCCTCCG +
Preference number: 5 (lower is better)
Translates to: RDCGPDCRRVWRRHW*CSPSSAVSCGSDPP
Trigger: CGGAGGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191823.6
ENSMUST00000205176.2
CDS-3UTR CAA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAGVEAT*VVLPEL
Trigger: GAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAAGCCCCGAGCAGGGCTaGTATCGCGGCTGCTCTCAC +
Preference number: 5 (lower is better)
Translates to: PHSTGVHLESAGPAEGGASPEQG*YRGCSH
Trigger: GTGAGAGCAGCCGCGATACAAGCCCTGCTCGGGGCT...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS CCA 90 bp TGGCGCGACTGCGGCCCCGACTGTCGGAGGGTGTGGAGGCGACATTaGTGGTGCTCCCCGAGCTCTGCCGTCTCGTGCGGATCCGACCTG +
Preference number: 5 (lower is better)
Translates to: WRDCGPDCRRVWRRH*WCSPSSAVSCGSDL
Trigger: CAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000189570.7
CDS CCA 90 bp TGGCGCGACTGCGGCCCCGACTGTCGGAGGGTGTGGAGGCGACATTaGTGGTGCTCCCCGAGCTCTGCCGTCTCGTGCGGATCCGACCCT +
Preference number: 5 (lower is better)
Translates to: WRDCGPDCRRVWRRH*WCSPSSAVSCGSDP
Trigger: AGGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191823.6
ENSMUST00000205176.2
CDS-3UTR CAA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGGVEAT*VVLPEL
Trigger: GAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGACTGTGAAACCACTTaGGCGCGACTGCGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: PHSTGVHLESAGPAEGGADCETT*ARLRPR
Trigger: TCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS GCA 90 bp GACTGCGGCCCCGACTGTCGGAGGGTGTGGAGGCGACATTGGTGGTaGTCCCCGAGCTCTGCCGTCTCGTGCGGATCCGACCCTCCGCTT +
Preference number: 5 (lower is better)
Translates to: DCGPDCRRVWRRHWW*SPSSAVSCGSDPPL
Trigger: AAGCGGAGGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191823.6
ENSMUST00000205176.2
CDS CCA 90 bp CGCGACTGCGGCCCCGACTGTCGGAGGGTGTGGAGGCGACATTGGTaGTGCTCCCCGAGCTCTGCCGTCTCGTGCGGATCCGACCTGCAT +
Preference number: 5 (lower is better)
Translates to: RDCGPDCRRVWRRHW*CSPSSAVSCGSDLH
Trigger: ATGCAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000189570.7
CDS-3UTR CAA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCACGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PHSTGVHLESAGPAEGGARGGCV*SREVLL
Trigger: CAACAAGACCTCCCTGCTCAACACGCAGCCTCCACG...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS GCA 90 bp GACTGCGGCCCCGACTGTCGGAGGGTGTGGAGGCGACATTGGTGGTaGTCCCCGAGCTCTGCCGTCTCGTGCGGATCCGACCTGCATCCA +
Preference number: 5 (lower is better)
Translates to: DCGPDCRRVWRRHWW*SPSSAVSCGSDLHP
Trigger: TGGATGCAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000189570.7
CDS GCA 90 bp GAGCAGGGCTTGTATCGCGGCTGCTCTCACGGCTGGTATCGCGGCTaGACCCCTGACTCATGCTGGGTCGGGGGATACGGCTGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: EQGLYRGCSHGWYRG*TPDSCWVGGYGCSV
Trigger: CACGGAGCAGCCGTATCCCCCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGCGATACAAGCCCTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTGVEAT*VVLPEL
Trigger: GAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGATCCTCCCTGGTGATCTaGAGCAACTCCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGSSLVI*SNSSSA
Trigger: CGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGA...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAAGCAGCAGGATGGTCTaGAAGTGCTCCTCCCACACG +
Preference number: 5 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGSSRMV*KCSSHT
Trigger: CGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCT...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS GCA 90 bp CGCGGCTGCTCTCACGGCTGGTATCGCGGCTGCACCCCTGACTCATaGTGGGTCGGGGGATACGGCTGCTCCGTGCTAATCCAATCCGGT +
Preference number: 5 (lower is better)
Translates to: RGCSHGWYRGCTPDS*WVGGYGCSVLIQSG
Trigger: ACCGGATTGGATTAGCACGGAGCAGCCGTATCCCCCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS TCA 90 bp CTTGTATCGCGGCTGCTCTCACGGCTGGTATCGCGGCTGCACCCCTaGCTCATGCTGGGTCGGGGGATACGGCTGCTCCGTGCTAATCCA +
Preference number: 5 (lower is better)
Translates to: LVSRLLSRLVSRLHP*LMLGRGIRLLRANP
Trigger: TGGATTAGCACGGAGCAGCCGTATCCCCCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGCGATACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS GCA 90 bp GTGTGGAGGCGACATTGGTGGTGCTCCCCGAGCTCTGCCGTCTCGTaGGGATCCGACCTGCATCCAGGCCTACGTACTCCAAGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: VWRRHWWCSPSSAVS*GSDLHPGLRTPSLP
Trigger: GGGAAGACTTGGAGTACGTAGGCCTGGATGCAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000189570.7
CDS-3UTR CAA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGATGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGAGCAGCAGGATGGTCTaGAAGTGCTCCTCCCACACG +
Preference number: 5 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTSSRMV*KCSSHT
Trigger: CGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCT...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAGTCTGTCTATTAGACTaGGCAACACTGTGCCGATTT +
Preference number: 5 (lower is better)
Translates to: PHSTGVHLESAGPAEGGAVCLLD*ATLCRF
Trigger: AAATCGGCACAGTGTTGCCAAGTCTAATAGACAGAC...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGGVEAT*VVLPEL
Trigger: GAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTGAGCGCCTGAGAGTCTaGTGGGAGGGAGCGGTGGGA +
Preference number: 5 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFERLRV*WEGAVG
Trigger: TCCCACCGCTCCCTCCCACAAGACTCTCAGGCGCTC...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGAGCAGGGAGGTCTTGTaGTCCAAAGCCATCCTGCCT +
Preference number: 5 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTSREVL*SKAILP
Trigger: AGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCT...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: VQRAAVGSVALHEVVVACCSKDS*VILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTGVEAT*VVLPEL
Trigger: GAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAGVEAT*VVLPEL
Trigger: GAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATCCACCAGACTGTTTATaGCTGCGTCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHPPDCL*LRLEPG
Trigger: GCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGG...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGAGGGGCAAGGATTTCTCTGATTTaGTTTATGGATTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: PHSTGVHLESAGPAEGGARISLI*FMDSSR
Trigger: CCTCGAGGAATCCATAAACAAAATCAGAGAAATCCT...TGCCCCTCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CCAGGTCCGCACAGCACGGGGGTGCACCTGGAGAGCGCCGGTCCAGCAGAGGGACAGAAGACGCAAGTGTaGAAAGAAGTTATCGTACTC +
Preference number: 5 (lower is better)
Translates to: PGPHSTGVHLESAGPAEGQKTQV*KEVIVL
Trigger: GAGTACGATAACTTCTTTCAACACTTGCGTCTTCTG...TCCCTCTGCTGGACCGGCGCTCTCCAGGTGCACCCCCGTGCTGTGCGGACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGACTGTGAAACCACTTaGGCGCGACTGCGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGDCETT*ARLRPR
Trigger: TCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGACTGTGAAACCACTTaGGCGCGACTGCGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTDCETT*ARLRPR
Trigger: TCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 5 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGTGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGAGCGCCTGAGAGTCTaGTGGGAGGGAGCGGTGGGA +
Preference number: 5 (lower is better)
Translates to: VVQTRASMALHFSVPRPCERLRV*WEGAVG
Trigger: TCCCACCGCTCCCTCCCACAAGACTCTCAGGCGCTC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGCGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGRGGCV*SREVLL
Trigger: CAACAAGACCTCCCTGCTCAACACGCAGCCTCCACG...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS CCA 90 bp GACCTGCATCCAGGCCTACGTACTCCAAGTCTTCCCTCATGTGTCTaGACTCTAGGGACGCATAGGATCCTGGGGGCAGTGCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: DLHPGLRTPSLPSCV*TLGTHRILGAVLLQ
Trigger: CTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCCCTAGAGTCCAGACACATGAGGGAAGACTTGGAGTACGTAGGCCTGGATGCAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000189570.7
CDS-3UTR CAA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: VQRAAVGSVALHEVVVACRKFLC*KPPSIL
Trigger: CAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCG...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLGVEAT*VVLPEL
Trigger: GAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAGVEAT*VVLPEL
Trigger: GAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACAGCCCCGAGCAGGGCTaGTATCGCGGCTGCTCTCAC +
Preference number: 5 (lower is better)
Translates to: DSKSCALHGLVMSAGGADSPEQG*YRGCSH
Trigger: GTGAGAGCAGCCGCGATACAAGCCCTGCTCGGGGCT...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 5 (lower is better)
Translates to: VQRAAVGSVALHEVVVACFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: VQRAAVGSVALHEVVVACWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTRGGCV*SREVLL
Trigger: CAACAAGACCTCCCTGCTCAACACGCAGCCTCCACG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTARGGCV*SREVLL
Trigger: CAACAAGACCTCCCTGCTCAACACGCAGCCTCCACG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGTCCTCCCTGGTGATCTaGAGCAACTCCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGSSLVI*SNSSSA
Trigger: CGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGA...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 5 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFTALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTCATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTAGCCCCGAGCAGGGCTaGTATCGCGGCTGCTCTCAC +
Preference number: 5 (lower is better)
Translates to: YQALARELWILRAVPSMVSPEQG*YRGCSH
Trigger: GTGAGAGCAGCCGCGATACAAGCCCTGCTCGGGGCT...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCG +
Preference number: 5 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGVRPIV*LGDPTP
Trigger: CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGAC...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHKVSGQ*YCLEIP
Trigger: TGGGATCTCCAAGCAATACAATTGGCCGGACACCTT...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTCCTCCCTGGTGATCTaGAGCAACTCCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSSLVI*SNSSSA
Trigger: CGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTCCTCCCTGGTGATCTaGAGCAACTCCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTSSLVI*SNSSSA
Trigger: CGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCAGCAGCAGGATGGTCTaGAAGTGCTCCTCCCACACG +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTSSRMV*KCSSHT
Trigger: CGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCAGCAGCAGGATGGTCTaGAAGTGCTCCTCCCACACG +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSSRMV*KCSSHT
Trigger: CGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTATALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGTALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTACSKDS*VILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGCSKDS*VILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFLVRKF*CLKPPS
Trigger: GCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAG...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGLVRKF*CLKPPS
Trigger: GCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAG...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTICGTI*LSVRVW
Trigger: CCAGACTCTAACACTAAGCAAGATTGTGCCACATAT...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCCACCAGACTGTTTATaGCTGCGTCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTPPDCL*LRLEPG
Trigger: GCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCACCAGACTGTTTATaGCTGCGTCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGPPDCL*LRLEPG
Trigger: GCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCGACTGTGAAACCACTTaGGCGCGACTGCGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSDCETT*ARLRPR
Trigger: TCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTC...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCGACTGTGAAACCACTTaGGCGCGACTGCGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSDCETT*ARLRPR
Trigger: TCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTC...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAACTGGCACAATGGTaGAGAACCTCTGCTACATCT +
Preference number: 5 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHELAQW*RTSATS
Trigger: AGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTC...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATAGAGATGAGCACAATTaGTGCTGCCTTTCTCACGTC +
Preference number: 5 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHRDEHN*CCLSHV
Trigger: GACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCT...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: VQRAAVGSVALHEVVVACHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCG +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGVRPIV*LGDPTP
Trigger: CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGAC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCG +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAVRPIV*LGDPTP
Trigger: CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGAC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCG +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTVRPIV*LGDPTP
Trigger: CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGAC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GCCATAGGTAAGGCGAGCCCAGGCCATCTGTGGGCACCAGGTCCGCACAGCACGATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: AIGKASPGHLWAPGPHSTISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...CGTGCTGTGCGGACCTGGTGCCCACAGATGGCCTGGGCTCGCCTTACCTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCAGCAGGGAGGTCTTGTaGTCCAAAGCCATCCTGCCT +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSREVL*SKAILP
Trigger: AGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCAGCAGGGAGGTCTTGTaGTCCAAAGCCATCCTGCCT +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTASREVL*SKAILP
Trigger: AGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGCGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLRGGCV*SREVLL
Trigger: CAACAAGACCTCCCTGCTCAACACGCAGCCTCCACG...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTRGGCV*SREVLL
Trigger: CAACAAGACCTCCCTGCTCAACACGCAGCCTCCACG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGAGCAGCAGGATGGTCTaGAAGTGCTCCTCCCACACG +
Preference number: 5 (lower is better)
Translates to: SKSCALHGLVMSAGGADTSSRMV*KCSSHT
Trigger: CGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCT...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCAGCAGCAGGATGGTCTaGAAGTGCTCCTCCCACACG +
Preference number: 5 (lower is better)
Translates to: VVQTRASMALHFSVPRPCSSRMV*KCSSHT
Trigger: CGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCT...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS GCA 90 bp TGTGCCGATTTGCGCCTTGAACCGGTCCTGCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCCCAAGAGAACCACCTTGTAATTGCT +
Preference number: 5 (lower is better)
Translates to: CADLRLEPVLQPSHQ*RQDVHAQENHLVIA
Trigger: AGCAATTACAAGGTGGTTCTCTTGGGCATGGACATCCTGTCGGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGCGCAAATCGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS GCA 90 bp ATTAGACTTGGCAACACTGTGCCGATTTGCGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCCGACAGGATGTCCATGCCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: IRLGNTVPICALNRS*SLVTSADRMSMPKR
Trigger: TCTCTTGGGCATGGACATCCTGTCGGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTTGCCAAGTCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS CCA 90 bp GTTTACAACTTTCTTCCAAGCTTCCTTCTCCAGGCCCAGAGCAGGTaGGAACTGACCTACCAGGGACATCCTCCCCTGCTCGACTACGCT +
Preference number: 5 (lower is better)
Translates to: VYNFLPSFLLQAQSR*ELTYQGHPPLLDYA
Trigger: AGCGTAGTCGAGCAGGGGAGGATGTCCCTGGTAGGTCAGTTCCCACCTGCTCTGGGCCTGGAGAAGGAAGCTTGGAAGAAAGTTGTAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192387.3
CDS CCA 90 bp ACATTCCATAGGGCTCGTATCTCCTTCTCACAGGCTTCTTGCTCCTaGCGTCTCCTAACAGCAGAGCGTCAGCCACTGCTGCTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: TFHRARISFSQASCS*RLLTAERQPLLLPG
Trigger: ACCTGGAAGCAGCAGTGGCTGACGCTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGCCTGTGAGAAGGAGATACGAGCCCTATGGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGRKFLC*KPPSIL
Trigger: CAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCG...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTALVRKF*CLKPPS
Trigger: GCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGCCACCAGACTGTTTATaGCTGCGTCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPPPDCL*LRLEPG
Trigger: GCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGG...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCCCACCAGACTGTTTATaGCTGCGTCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: VVQTRASMALHFSVPRPCPPDCL*LRLEPG
Trigger: GCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGG...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGCATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: SKSCALHGLVMSAGGADTEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGCTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGLEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTTCAGGATTGCTACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: VQRAAVGSVALHEVVVACFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTAGCAATCCTGAA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCTTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCC +
Preference number: 5 (lower is better)
Translates to: VQRAAVGSVALHEVVVACFLPSR*IGSFRS
Trigger: GGATCTAAATGAGCCAATCAAACGAGATGGCAAGAA...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: VQRAAVGSVALHEVVVACISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTCCTCCCTGGTGATCTaGAGCAACTCCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGSSLVI*SNSSSA
Trigger: CGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTAGCAGCAGGATGGTCTaGAAGTGCTCCTCCCACACG +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTSSRMV*KCSSHT
Trigger: CGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCT...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTCCTTGTGGGAGTCTTaGTGGGCTTCCAGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGSLWES*WASRVF
Trigger: GAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 5 (lower is better)
Translates to: DSKSCALHGLVMSAGGADTALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGCSKDS*VILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACTGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: DSKSCALHGLVMSAGGADCSKDS*VILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCA...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: VVQTRASMALHFSVPRPCELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS TCA 90 bp TGTAGAGCCTCTGGATGCAGTGCTGCCAGTGGGACTTCTTTTGGCTaGAAGTGGCCGGTTGAGACTCTCTTGAGAGCTGGAAGAGGATCG +
Preference number: 5 (lower is better)
Translates to: CRASGCSAASGTSFG*KWPVETLLRAGRGS
Trigger: CGATCCTCTTCCAGCTCTCAAGAGAGTCTCAACCGGCCACTTTCAGCCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS GCA 90 bp CAGAGTACATTCCATAGGGCTCGTATCTCCTTCTCACAGGCTTCTTaGTCCTGGCGTCTCCTAACAGCAGAGCGTCAGCCACTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: QSTFHRARISFSQAS*SWRLLTAERQPLLL
Trigger: AAGCAGCAGTGGCTGACGCTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGCCTGTGAGAAGGAGATACGAGCCCTATGGAATGTACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTCAACACTGTGCCGATTaGCGCCTTGAACCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: YQALARELWILRAVPSMVQHCAD*RLEPVL
Trigger: CAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTTG...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTRKFLC*KPPSIL
Trigger: CAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGRKFLC*KPPSIL
Trigger: CAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPLVRKF*CLKPPS
Trigger: GCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAG...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: VQTRASMALHFSVPRPCFHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCCATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GGTACAGTTGCTGGTTATGACAGGGATCAGCCGAGGGATGTGAGTGTGCCGAATCATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: GTVAGYDRDQPRDVSVPNHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...ATTCGGCACACTCACATCCCTCGGCTGATCCCTGTCATAACCAGCAACTGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204904.3
CDS-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGTGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGCSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: DSKSCALHGLVMSAGGADEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTLEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTALEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATGAGGTGGTGGTGGCATGCCTTGAGGTTTGGAGTTaGAGTCTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: VQRAAVGSVALHEVVVACLEVWS*SLIHNK
Trigger: TTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG...GCATGCCACCACCACCTCATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGAGAGATGAGCACAATTaGTGCTGCCTTTCTCACGTC +
Preference number: 5 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGRDEHN*CCLSHV
Trigger: GACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCT...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTAGAGATGAGCACAATTaGTGCTGCCTTTCTCACGTC +
Preference number: 5 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFRDEHN*CCLSHV
Trigger: GACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCT...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCG +
Preference number: 5 (lower is better)
Translates to: DSKSCALHGLVMSAGGADVRPIV*LGDPTP
Trigger: CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGAC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCG +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTVRPIV*LGDPTP
Trigger: CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGAC...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCG +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGVRPIV*LGDPTP
Trigger: CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGAC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAKVSGQ*YCLEIP
Trigger: TGGGATCTCCAAGCAATACAATTGGCCGGACACCTT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATTTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCC +
Preference number: 5 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHFLPSR*IGSFRS
Trigger: GGATCTAAATGAGCCAATCAAACGAGATGGCAAGAA...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACAGCAGGGAGGTCTTGTaGTCCAAAGCCATCCTGCCT +
Preference number: 5 (lower is better)
Translates to: DSKSCALHGLVMSAGGADSREVL*SKAILP
Trigger: AGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCT...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTAGCAGGGAGGTCTTGTaGTCCAAAGCCATCCTGCCT +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTSREVL*SKAILP
Trigger: AGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCT...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCTCCTCCCTGGTGATCTaGAGCAACTCCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSSSLVI*SNSSSA
Trigger: CGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGA...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTRMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGRMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 5 (lower is better)
Translates to: YQALARELWILRAVPSMVTALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 5 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSTALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCAGCTGTAGCTGTCAGGGTTCAGAGAGCGGCAGTGGGCTCTGTCGCCCTCCATCGATTACGGAATAGATaGCCACTAAGCAAAACACAC +
Preference number: 5 (lower is better)
Translates to: AAVAVRVQRAAVGSVALHRLRNR*PLSKTH
Trigger: GTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCG...ATGGAGGGCGACAGAGCCCACTGCCGCTCTCTGAACCCTGACAGCTACAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: DSKSCALHGLVMSAGGADELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: VQTRASMALHFSVPRPCFELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS TCA 90 bp CAACAGGGTCTGGTCGTGCTCAAGGTCAGCAGACTTCTGTCTGTCTaGGAAATAGTCTATGAGTTCCTGGCCAACCTGCAGCCGCTTTCC +
Preference number: 5 (lower is better)
Translates to: QQGLVVLKVSRLLSV*EIVYEFLANLQPLS
Trigger: GGAAAGCGGCTGCAGGTTGGCCAGGAACTCATAGACTATTTCTCAGACAGACAGAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCACAACACTGTGCCGATTaGCGCCTTGAACCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAQHCAD*RLEPVL
Trigger: CAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTTG...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGCGGTCCCCCAGGGTAGGGGGTTTCAAGGCCTTGGATAGTCAGATAGATGGGGTCTGTCTATTAGACTaGGCAACACTGTGCCGATTT +
Preference number: 5 (lower is better)
Translates to: ERSPRVGGFKALDSQIDGVCLLD*ATLCRF
Trigger: AAATCGGCACAGTGTTGCCAAGTCTAATAGACAGAC...CCCATCTATCTGACTATCCAAGGCCTTGAAACCCCCTACCCTGGGGGACCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPRKFLC*KPPSIL
Trigger: CAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCG...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: SKSCALHGLVMSAGGADTRKFLC*KPPSIL
Trigger: CAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCG...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTLVRKF*CLKPPS
Trigger: GCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLLVRKF*CLKPPS
Trigger: GCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAG...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: DSKSCALHGLVMSAGGADLVRKF*CLKPPS
Trigger: GCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGCSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTCSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCGACTTAGAGGTACAGTaGCTGGTTATGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGDLEVQ*LVMTGI
Trigger: GATCCCTGTCATAACCAGCAACTGTACCTCTAAGTC...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGACTTAGAGGTACAGTaGCTGGTTATGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTADLEVQ*LVMTGI
Trigger: GATCCCTGTCATAACCAGCAACTGTACCTCTAAGTC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPGVEAT*VVLPEL
Trigger: GAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CAGCACATGAGGAATAACACTGAAGGCTGTTATTCCTCTGGCCTGTATGCATATGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: QHMRNNTEGCYSSGLYAYGVEAT*VVLPEL
Trigger: GAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC...ATATGCATACAGGCCAGAGGAATAACAGCCTTCAGTGTTATTCCTCATGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGACTGTGAAACCACTTaGGCGCGACTGCGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: GDKPVALPAHMLKASSEPDCETT*ARLRPR
Trigger: TCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAGACTGTGAAACCACTTaGGCGCGACTGCGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLDCETT*ARLRPR
Trigger: TCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTC...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTGACTGTGAAACCACTTaGGCGCGACTGCGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: TPKSVWTEKYATVYQALADCETT*ARLRPR
Trigger: TCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTC...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGAACTGGCACAATGGTaGAGAACCTCTGCTACATCT +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAELAQW*RTSATS
Trigger: AGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCAGAGATGAGCACAATTaGTGCTGCCTTTCTCACGTC +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTRDEHN*CCLSHV
Trigger: GACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: VVQTRASMALHFSVPRPCKVSGQ*YCLEIP
Trigger: TGGGATCTCCAAGCAATACAATTGGCCGGACACCTT...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPKVSGQ*YCLEIP
Trigger: TGGGATCTCCAAGCAATACAATTGGCCGGACACCTT...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTAGCAGGGAGGTCTTGTaGTCCAAAGCCATCCTGCCT +
Preference number: 5 (lower is better)
Translates to: YQALARELWILRAVPSMVSREVL*SKAILP
Trigger: AGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCT...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCATCCTCCCTGGTGATCTaGAGCAACTCCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPASSLVI*SNSSSA
Trigger: CGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGA...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGCGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SKSCALHGLVMSAGGADTRMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTCCTTGTGGGAGTCTTaGTGGGCTTCCAGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGSLWES*WASRVF
Trigger: GAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGTCCTTGTGGGAGTCTTaGTGGGCTTCCAGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLSLWES*WASRVF
Trigger: GAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGA...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTCCTTGTGGGAGTCTTaGTGGGCTTCCAGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: VQTRASMALHFSVPRPCFSLWES*WASRVF
Trigger: GAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPATALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGTCTGTCTATTAGACTaGGCAACACTGTGCCGATTT +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAVCLLD*ATLCRF
Trigger: AAATCGGCACAGTGTTGCCAAGTCTAATAGACAGAC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: DSKSCALHGLVMSAGGADRKFLC*KPPSIL
Trigger: CAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCG...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: YQALARELWILRAVPSMVLVRKF*CLKPPS
Trigger: GCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAG...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSLVRKF*CLKPPS
Trigger: GCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAG...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCACATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGGACTTAGAGGTACAGTaGCTGGTTATGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: SKSCALHGLVMSAGGADTDLEVQ*LVMTGI
Trigger: GATCCCTGTCATAACCAGCAACTGTACCTCTAAGTC...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGGVEAT*VVLPEL
Trigger: GAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAGCCCCGAGCAGGGCTaGTATCGCGGCTGCTCTCAC +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGSPEQG*YRGCSH
Trigger: GTGAGAGCAGCCGCGATACAAGCCCTGCTCGGGGCT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTLEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTCTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: WCRHVQVWLFISQSPGLALEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: VQTRASMALHFSVPRPCFLEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGCTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLLEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCCTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGLEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGGAACTGGCACAATGGTaGAGAACCTCTGCTACATCT +
Preference number: 5 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPELAQW*RTSATS
Trigger: AGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTC...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 5 (lower is better)
Translates to: VQTRASMALHFSVPRPCFFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCGACGAAGAGCCAGTCTaGCAAGTCATCCTTATGAAT +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTADEEPV*QVILMN
Trigger: ATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTC...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCGACGAAGAGCCAGTCTaGCAAGTCATCCTTATGAAT +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTDEEPV*QVILMN
Trigger: ATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTC...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCG +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAVRPIV*LGDPTP
Trigger: CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGAC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGKVSGQ*YCLEIP
Trigger: TGGGATCTCCAAGCAATACAATTGGCCGGACACCTT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTTTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCC +
Preference number: 5 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFFLPSR*IGSFRS
Trigger: GGATCTAAATGAGCCAATCAAACGAGATGGCAAGAA...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCCGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: THTEPSFSVSISHGFSPTRGGCV*SREVLL
Trigger: CAACAAGACCTCCCTGCTCAACACGCAGCCTCCACG...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTRMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCTCCTTGTGGGAGTCTTaGTGGGCTTCCAGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSSLWES*WASRVF
Trigger: GAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGA...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTCCTTGTGGGAGTCTTaGTGGGCTTCCAGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: YQALARELWILRAVPSMVSLWES*WASRVF
Trigger: GAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGA...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCAACACTGTGCCGATTaGCGCCTTGAACCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNQHCAD*RLEPVL
Trigger: CAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTTG...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTACAACACTGTGCCGATTaGCGCCTTGAACCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLQHCAD*RLEPVL
Trigger: CAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTTG...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCGTCTGTCTATTAGACTaGGCAACACTGTGCCGATTT +
Preference number: 5 (lower is better)
Translates to: VVQTRASMALHFSVPRPCVCLLD*ATLCRF
Trigger: AAATCGGCACAGTGTTGCCAAGTCTAATAGACAGAC...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: YQALARELWILRAVPSMVRKFLC*KPPSIL
Trigger: CAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCG...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCACTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPALVRKF*CLKPPS
Trigger: GCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAG...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAICGTI*LSVRVW
Trigger: CCAGACTCTAACACTAAGCAAGATTGTGCCACATAT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp TCAGGACTGCAAAGCAAATGCCATTACTGTCTGGGTCACTTGTCAGTCTCAGGTCATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: SGLQSKCHYCLGHLSVSGHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...ACCTGAGACTGACAAGTGACCCAGACAGTAATGGCATTTGCTTTGCAGTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR CAA 90 bp CGTGGGAGGCTGAGGCAGGAGGACACCACATCCAAGGCCAGCCTAGGAAAGTTTAGGATTTCTCTGATTTaGTTTATGGATTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: RGRLRQEDTTSKASLGKFRISLI*FMDSSR
Trigger: CCTCGAGGAATCCATAAACAAAATCAGAGAAATCCT...AAACTTTCCTAGGCTGGCCTTGGATGTGGTGTCCTCCTGCCTCAGCCTCCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGCSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCAGAAGACGCAAGTGTaGAAAGAAGTTATCGTACTC +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGQKTQV*KEVIVL
Trigger: GAGTACGATAACTTCTTTCAACACTTGCGTCTTCTG...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCAGAAGACGCAAGTGTaGAAAGAAGTTATCGTACTC +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTQKTQV*KEVIVL
Trigger: GAGTACGATAACTTCTTTCAACACTTGCGTCTTCTG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCAGAAGACGCAAGTGTaGAAAGAAGTTATCGTACTC +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAQKTQV*KEVIVL
Trigger: GAGTACGATAACTTCTTTCAACACTTGCGTCTTCTG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTGACTTAGAGGTACAGTaGCTGGTTATGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: WCRHVQVWLFISQSPGLADLEVQ*LVMTGI
Trigger: GATCCCTGTCATAACCAGCAACTGTACCTCTAAGTC...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGACTTAGAGGTACAGTaGCTGGTTATGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGDLEVQ*LVMTGI
Trigger: GATCCCTGTCATAACCAGCAACTGTACCTCTAAGTC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGTGTGGAGGCGACATaGGTGGTGCTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLGVEAT*VVLPEL
Trigger: GAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACAGCCCCGAGCAGGGCTaGTATCGCGGCTGCTCTCAC +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSPEQG*YRGCSH
Trigger: GTGAGAGCAGCCGCGATACAAGCCCTGCTCGGGGCT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTCTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: YQALARELWILRAVPSMVLEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGAACTGGCACAATGGTaGAGAACCTCTGCTACATCT +
Preference number: 5 (lower is better)
Translates to: DSKSCALHGLVMSAGGADELAQW*RTSATS
Trigger: AGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGAACTGGCACAATGGTaGAGAACCTCTGCTACATCT +
Preference number: 5 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLELAQW*RTSATS
Trigger: AGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCTTCAGGATTGCTACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTAGCAATCCTGAA...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCTTCAGGATTGCTACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTAGCAATCCTGAA...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: YQALARELWILRAVPSMVWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGAGCGCCTGAGAGTCTaGTGGGAGGGAGCGGTGGGA +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLERLRV*WEGAVG
Trigger: TCCCACCGCTCCCTCCCACAAGACTCTCAGGCGCTC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTAISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: DGASQRHHQCVFCTDWHGISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...GCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCACGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSRGGCV*SREVLL
Trigger: CAACAAGACCTCCCTGCTCAACACGCAGCCTCCACG...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPRGGCV*SREVLL
Trigger: CAACAAGACCTCCCTGCTCAACACGCAGCCTCCACG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAATCCTCCCTGGTGATCTaGAGCAACTCCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQSSLVI*SNSSSA
Trigger: CGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGA...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAAGCAGCAGGATGGTCTaGAAGTGCTCCTCCCACACG +
Preference number: 5 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQSSRMV*KCSSHT
Trigger: CGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCT...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLTALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCATGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: GDKPVALPAHMLKASSEPCSKDS*VILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCA...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTATGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLCSKDS*VILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCA...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTTGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: TPKSVWTEKYATVYQALACSKDS*VILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCA...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAATGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQCSKDS*VILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCA...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCGATTACGGAATAGATaGCCACTAAGCAAAACACAC +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTARLRNR*PLSKTH
Trigger: GTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCCGATTACGGAATAGATaGCCACTAAGCAAAACACAC +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTRLRNR*PLSKTH
Trigger: GTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCG...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS TCA 90 bp ATCCTCCCCTGCTCGACTACGCTGACGCTGGGACTTTCTCACGTCTaGACTCTTTGGTTCTGTAGTCCATGTTATGATCCTAGAAACAGC +
Preference number: 5 (lower is better)
Translates to: ILPCSTTLTLGLSHV*TLWFCSPCYDPRNS
Trigger: GCTGTTTCTAGGATCATAACATGGACTACAGAACCAAAGAGTTCAGACGTGAGAAAGTCCCAGCGTCAGCGTAGTCGAGCAGGGGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192387.3
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTGTCTGTCTATTAGACTaGGCAACACTGTGCCGATTT +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTVCLLD*ATLCRF
Trigger: AAATCGGCACAGTGTTGCCAAGTCTAATAGACAGAC...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCACGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPARKFLC*KPPSIL
Trigger: CAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCG...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: SKSCALHGLVMSAGGADTICGTI*LSVRVW
Trigger: CCAGACTCTAACACTAAGCAAGATTGTGCCACATAT...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCACCACCAGACTGTTTATaGCTGCGTCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: GDKPVALPAHMLKASSEPPPDCL*LRLEPG
Trigger: GCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGG...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTCCACCAGACTGTTTATaGCTGCGTCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: TPKSVWTEKYATVYQALAPPDCL*LRLEPG
Trigger: GCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGG...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCACCAGGATTTCTCTGATTTaGTTTATGGATTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: MCGLLEWTGQLMELLRGTRISLI*FMDSSR
Trigger: CCTCGAGGAATCCATAAACAAAATCAGAGAAATCCT...GGTGCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTTGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: YQALARELWILRAVPSMVCSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGCAGAAGACGCAAGTGTaGAAAGAAGTTATCGTACTC +
Preference number: 5 (lower is better)
Translates to: SKSCALHGLVMSAGGADTQKTQV*KEVIVL
Trigger: GAGTACGATAACTTCTTTCAACACTTGCGTCTTCTG...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: TPKSVWTEKYATVYQALAEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: GDKPVALPAHMLKASSEPEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGACTGTGAAACCACTTaGGCGCGACTGCGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNDCETT*ARLRPR
Trigger: TCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGACTGTGAAACCACTTaGGCGCGACTGCGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLDCETT*ARLRPR
Trigger: TCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GATTCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACGACGAAGAGCCAGTCTaGCAAGTCATCCTTATGAAT +
Preference number: 5 (lower is better)
Translates to: DSKSCALHGLVMSAGGADDEEPV*QVILMN
Trigger: ATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTC...GTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGGACGAAGAGCCAGTCTaGCAAGTCATCCTTATGAAT +
Preference number: 5 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLDEEPV*QVILMN
Trigger: ATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTC...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCGACGAAGAGCCAGTCTaGCAAGTCATCCTTATGAAT +
Preference number: 5 (lower is better)
Translates to: VQTRASMALHFSVPRPCFDEEPV*QVILMN
Trigger: ATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTC...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATGGAGCTTCTCAGAGGCACCACCAATGTGTGTTCTGCACAGACTGGCACGGCCCTTGAGGTTTGGAGTTaGAGTCTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: MELLRGTTNVCSAQTGTALEVWS*SLIHNK
Trigger: TTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG...GGCCGTGCCAGTCTGTGCAGAACACACATTGGTGGTGCCTCTGAGAAGCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCAGAGATGAGCACAATTaGTGCTGCCTTTCTCACGTC +
Preference number: 5 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSRDEHN*CCLSHV
Trigger: GACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCT...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: VQTRASMALHFSVPRPCFHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TACAGTGGGCTCTGCACTAGAAGAGCACATGCTTTTCGAAAACTAACACCGCAAGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCG +
Preference number: 5 (lower is better)
Translates to: YSGLCTRRAHAFRKLTPQVRPIV*LGDPTP
Trigger: CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGAC...TTGCGGTGTTAGTTTTCGAAAAGCATGTGCTCTTCTAGTGCAGAGCCCACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: VVQTRASMALHFSVPRPCISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...GCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGRGGCV*SREVLL
Trigger: CAACAAGACCTCCCTGCTCAACACGCAGCCTCCACG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTTCCTCCCTGGTGATCTaGAGCAACTCCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPSSLVI*SNSSSA
Trigger: CGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGA...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAAGCAGCAGGATGGTCTaGAAGTGCTCCTCCCACACG +
Preference number: 5 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTSSRMV*KCSSHT
Trigger: CGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCT...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCACGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPARMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTTCCTTGTGGGAGTCTTaGTGGGCTTCCAGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLSLWES*WASRVF
Trigger: GAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGA...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPTALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 5 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFTALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFCSKDS*VILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGCGATTACGGAATAGATaGCCACTAAGCAAAACACAC +
Preference number: 5 (lower is better)
Translates to: SKSCALHGLVMSAGGADTRLRNR*PLSKTH
Trigger: GTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCG...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: GDKPVALPAHMLKASSEPELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTGTCTGTCTATTAGACTaGGCAACACTGTGCCGATTT +
Preference number: 5 (lower is better)
Translates to: YQALARELWILRAVPSMVVCLLD*ATLCRF
Trigger: AAATCGGCACAGTGTTGCCAAGTCTAATAGACAGAC...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGICGTI*LSVRVW
Trigger: CCAGACTCTAACACTAAGCAAGATTGTGCCACATAT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAICGTI*LSVRVW
Trigger: CCAGACTCTAACACTAAGCAAGATTGTGCCACATAT...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLICGTI*LSVRVW
Trigger: CCAGACTCTAACACTAAGCAAGATTGTGCCACATAT...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCACCACCAGACTGTTTATaGCTGCGTCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSPPDCL*LRLEPG
Trigger: GCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGG...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATCCACCAGACTGTTTATaGCTGCGTCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNPPDCL*LRLEPG
Trigger: GCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGG...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCTAAGAGCTGTGCCCTCCATGGTTTGGTGATGTCAGCAGGTGGTGCAGACACGAGGATTTCTCTGATTTaGTTTATGGATTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: SKSCALHGLVMSAGGADTRISLI*FMDSSR
Trigger: CCTCGAGGAATCCATAAACAAAATCAGAGAAATCCT...CGTGTCTGCACCACCTGCTGACATCACCAAACCATGGAGGGCACAGCTCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGAGGATTTCTCTGATTTaGTTTATGGATTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: ADTCKYGSSFLSPQALLPRISLI*FMDSSR
Trigger: CCTCGAGGAATCCATAAACAAAATCAGAGAAATCCT...CGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTCAGAAGACGCAAGTGTaGAAAGAAGTTATCGTACTC +
Preference number: 5 (lower is better)
Translates to: CEASSRLSSFSCPDCSSTQKTQV*KEVIVL
Trigger: GAGTACGATAACTTCTTTCAACACTTGCGTCTTCTG...AGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTTCAGGATTGCTACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTAGCAATCCTGAA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TACCAAGCACTGGCTAGAGAGCTCTGGATTCTAAGAGCTGTGCCCTCCATGGTTCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: YQALARELWILRAVPSMVHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...AACCATGGAGGGCACAGCTCTTAGAATCCAGAGCTCTCTAGCCAGTGCTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCG +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPVRPIV*LGDPTP
Trigger: CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGAC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AAGACATCTCGCCGAAAGAGCCTGCTAGCCTCAGTTCAGTCTGAGCTCCTGGAATTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCC +
Preference number: 5 (lower is better)
Translates to: KTSRRKSLLASVQSELLEFLPSR*IGSFRS
Trigger: GGATCTAAATGAGCCAATCAAACGAGATGGCAAGAA...TTCCAGGAGCTCAGACTGAACTGAGGCTAGCAGGCTCTTTCGGCGAGATGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR CAA 90 bp TGGTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCC +
Preference number: 5 (lower is better)
Translates to: WCRHVQVWLFISQSPGLAFLPSR*IGSFRS
Trigger: GGATCTAAATGAGCCAATCAAACGAGATGGCAAGAA...AGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCTTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCC +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGFLPSR*IGSFRS
Trigger: GGATCTAAATGAGCCAATCAAACGAGATGGCAAGAA...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGTTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCC +
Preference number: 5 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLFLPSR*IGSFRS
Trigger: GGATCTAAATGAGCCAATCAAACGAGATGGCAAGAA...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGATGGAGCTTCTCAGAGGCATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: IMCGLLEWTGQLMELLRGISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...GCCTCTGAGAAGCTCCATCAGTTGCCCAGTCCATTCAAGGAGGCCGCACATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATAGCAGGGAGGTCTTGTaGTCCAAAGCCATCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNSREVL*SKAILP
Trigger: AGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCT...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACGTGGAGGCTGCGTGTaGAGCAGGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLERGGCV*SREVLL
Trigger: CAACAAGACCTCCCTGCTCAACACGCAGCCTCCACG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTATCCTCCCTGGTGATCTaGAGCAACTCCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: ISQSPGLASVTFNTSKILSSLVI*SNSSSA
Trigger: CGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGA...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAGCAGCAGGATGGTCTaGAAGTGCTCCTCCCACACG +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGSSRMV*KCSSHT
Trigger: CGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTATGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: ISQSPGLASVTFNTSKILCSKDS*VILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCA...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: FVCTVRMSGNALELFGYSELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCAACACTGTGCCGATTaGCGCCTTGAACCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNQHCAD*RLEPVL
Trigger: CAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTTG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACCACCAGACTGTTTATaGCTGCGTCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: ISQSPGLASVTFNTSKILPPDCL*LRLEPG
Trigger: GCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGG...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACATTCCTCCGGGAACTaGATGGGGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: ISQSPGLASVTFNTSKILHSSGN*MGPWMM
Trigger: CATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATG...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCATTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 5 (lower is better)
Translates to: GDKPVALPAHMLKASSEPFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAGACGAAGAGCCAGTCTaGCAAGTCATCCTTATGAAT +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPADEEPV*QVILMN
Trigger: ATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTC...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGCTTGAGGTTTGGAGTTaGAGTCTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: EASSRLSSFSCPDCSSTLLEVWS*SLIHNK
Trigger: TTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG...CAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTGCAGACACGTGCAAGTATGGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCTTGAGGTTTGGAGTTaGAGTCTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: VQTRASMALHFSVPRPCFLEVWS*SLIHNK
Trigger: TTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG...GAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCCATACTTGCACGTGTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCTTCAGGATTGCTACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTAGCAATCCTGAA...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTTGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: TPKSVWTEKYATVYQALAWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGGCAAAGAATGCCAGAGCAGGGCCTTTCTAACTGTATTAGGCTTGGGAGTTCCTTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCC +
Preference number: 5 (lower is better)
Translates to: GQRMPEQGLSNCIRLGSSFLPSR*IGSFRS
Trigger: GGATCTAAATGAGCCAATCAAACGAGATGGCAAGAA...GGAACTCCCAAGCCTAATACAGTTAGAAAGGCCCTGCTCTGGCATTCTTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAAGCAGGGAGGTCTTGTaGTCCAAAGCCATCCTGCCT +
Preference number: 5 (lower is better)
Translates to: ISQSPGLASVTFNTSKILSREVL*SKAILP
Trigger: AGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCT...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTCCTCCCTGGTGATCTaGAGCAACTCCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSSLVI*SNSSSA
Trigger: CGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAAGCAGCAGGATGGTCTaGAAGTGCTCCTCCCACACG +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLESSRMV*KCSSHT
Trigger: CGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCT...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCACGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: GDKPVALPAHMLKASSEPRMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNTALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGACTGCTCTGGGTGGATaGAGCTGGCTAGCGTGGATG +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLTALGG*SWLAWM
Trigger: CATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATGCAGCAAGGACTCCTaGGTGATCCTCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLECSKDS*VILSTT
Trigger: GGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCCGATTACGGAATAGATaGCCACTAAGCAAAACACAC +
Preference number: 5 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSRLRNR*PLSKTH
Trigger: GTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCG...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGAGCTGCTGTTGCTGTaGGTAGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CAGGACTGCAAAGCAAATGCCATTACTGTCTGGGTCACTTGTCAGTCTCAGGTTGTCTGTCTATTAGACTaGGCAACACTGTGCCGATTT +
Preference number: 5 (lower is better)
Translates to: QDCKANAITVWVTCQSQVVCLLD*ATLCRF
Trigger: AAATCGGCACAGTGTTGCCAAGTCTAATAGACAGAC...AACCTGAGACTGACAAGTGACCCAGACAGTAATGGCATTTGCTTTGCAGTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPRKFLC*KPPSIL
Trigger: CAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGLVRKF*CLKPPS
Trigger: GCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCCACCAGACTGTTTATaGCTGCGTCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNPPDCL*LRLEPG
Trigger: GCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCATGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: GDKPVALPAHMLKASSEPCSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTTGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: TPKSVWTEKYATVYQALACSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCACAGAAGACGCAAGTGTaGAAAGAAGTTATCGTACTC +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPAQKTQV*KEVIVL
Trigger: GAGTACGATAACTTCTTTCAACACTTGCGTCTTCTG...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGACTTAGAGGTACAGTaGCTGGTTATGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: GDKPVALPAHMLKASSEPDLEVQ*LVMTGI
Trigger: GATCCCTGTCATAACCAGCAACTGTACCTCTAAGTC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGACTTAGAGGTACAGTaGCTGGTTATGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: THTEPSFSVSISHGFSPTDLEVQ*LVMTGI
Trigger: GATCCCTGTCATAACCAGCAACTGTACCTCTAAGTC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: GDKPVALPAHMLKASSEPVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: THTEPSFSVSISHGFSPTVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCAGAACTGGCACAATGGTaGAGAACCTCTGCTACATCT +
Preference number: 5 (lower is better)
Translates to: GDKPVALPAHMLKASSEPELAQW*RTSATS
Trigger: AGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTC...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 5 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTTTGTGAGGCCAGCTCCAGGTTGTCGTCTTTTTCTTGCCCAGACTGCAGTTCCCTTGAGGTTTGGAGTTaGAGTCTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: FCEASSRLSSFSCPDCSSLEVWS*SLIHNK
Trigger: TTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG...GGAACTGCAGTCTGGGCAAGAAAAAGACGACAACCTGGAGCTGGCCTCACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCAGAGATGAGCACAATTaGTGCTGCCTTTCTCACGTC +
Preference number: 5 (lower is better)
Translates to: THTEPSFSVSISHGFSPTRDEHN*CCLSHV
Trigger: GACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCT...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTTGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGTCCGGCCAATTGTATaGCTTGGAGATCCCACACCG +
Preference number: 5 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLVRPIV*LGDPTP
Trigger: CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGAC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSKVSGQ*YCLEIP
Trigger: TGGGATCTCCAAGCAATACAATTGGCCGGACACCTT...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFKVSGQ*YCLEIP
Trigger: TGGGATCTCCAAGCAATACAATTGGCCGGACACCTT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAAGCAGGGAGGTCTTGTaGTCCAAAGCCATCCTGCCT +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLESREVL*SKAILP
Trigger: AGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCT...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACAGCAGGGAGGTCTTGTaGTCCAAAGCCATCCTGCCT +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSREVL*SKAILP
Trigger: AGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFRMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS TCA 90 bp CTTCTGAATCAGCAATCTTGCTGTGAGGGTCGGCAAACATTCGGGTaGAAATCTCACACAGTCTCTTCAATTCTACTCGACTCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: LLNQQSCCEGRQTFG*KSHTVSSILLDSVF
Trigger: GAACACTGAGTCGAGTAGAATTGAAGAGACTGTGTGAGATTTTCACCCGAATGTTTGCCGACCCTCACAGCAAGATTGCTGATTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185405.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNLVRKF*CLKPPS
Trigger: GCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFCSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CAGCACATGAGGAATAACACTGAAGGCTGTTATTCCTCTGGCCTGTATGCATATTGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: QHMRNNTEGCYSSGLYAYCSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...ATATGCATACAGGCCAGAGGAATAACAGCCTTCAGTGTTATTCCTCATGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188710.7
CDS-3UTR CAA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCAGACTTAGAGGTACAGTaGCTGGTTATGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSDLEVQ*LVMTGI
Trigger: GATCCCTGTCATAACCAGCAACTGTACCTCTAAGTC...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGACTTAGAGGTACAGTaGCTGGTTATGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNDLEVQ*LVMTGI
Trigger: GATCCCTGTCATAACCAGCAACTGTACCTCTAAGTC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGAACTGGCACAATGGTaGAGAACCTCTGCTACATCT +
Preference number: 5 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNELAQW*RTSATS
Trigger: AGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTGAACTGGCACAATGGTaGAGAACCTCTGCTACATCT +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPELAQW*RTSATS
Trigger: AGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTC...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTGAACTGGCACAATGGTaGAGAACCTCTGCTACATCT +
Preference number: 5 (lower is better)
Translates to: FVCTVRMSGNALELFGYSELAQW*RTSATS
Trigger: AGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTC...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCGAACTGGCACAATGGTaGAGAACCTCTGCTACATCT +
Preference number: 5 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFELAQW*RTSATS
Trigger: AGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTC...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAGACGAAGAGCCAGTCTaGCAAGTCATCCTTATGAAT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLDEEPV*QVILMN
Trigger: ATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTC...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGCTCTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCACTTGAGGTTTGGAGTTaGAGTCTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: GSSFLSPQALLPLHSIPALEVWS*SLIHNK
Trigger: TTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG...TGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAAGAGATGAGCACAATTaGTGCTGCCTTTCTCACGTC +
Preference number: 5 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTRDEHN*CCLSHV
Trigger: GACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCT...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATAGAGATGAGCACAATTaGTGCTGCCTTTCTCACGTC +
Preference number: 5 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNRDEHN*CCLSHV
Trigger: GACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCT...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GGAGACAAACCTGTTGCATTACCTGCACACATGTTGAAAGCTAGTAGTGAGCCACATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: GDKPVALPAHMLKASSEPHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...TGGCTCACTACTAGCTTTCAACATGTGTGCAGGTAATGCAACAGGTTTGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCTCCTCCCTGGTGATCTaGAGCAACTCCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: HLFFNATMRTLVALLILFSSLVI*SNSSSA
Trigger: CGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGA...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: ISQSPGLASVTFNTSKILRMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCCGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGRMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTCCTTGTGGGAGTCTTaGTGGGCTTCCAGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNSLWES*WASRVF
Trigger: GAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATGTCTGTCTATTAGACTaGGCAACACTGTGCCGATTT +
Preference number: 5 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNVCLLD*ATLCRF
Trigger: AAATCGGCACAGTGTTGCCAAGTCTAATAGACAGAC...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGTCTGTCTATTAGACTaGGCAACACTGTGCCGATTT +
Preference number: 5 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTVCLLD*ATLCRF
Trigger: AAATCGGCACAGTGTTGCCAAGTCTAATAGACAGAC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLRKFLC*KPPSIL
Trigger: CAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNRKFLC*KPPSIL
Trigger: CAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp CACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: HTHGTFIFSVYFPRVFSNICGTI*LSVRVW
Trigger: CCAGACTCTAACACTAAGCAAGATTGTGCCACATAT...GTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACGGAACCTTCATTTTCAGTGTCTAATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTRNLHFQCLICGTI*LSVRVW
Trigger: CCAGACTCTAACACTAAGCAAGATTGTGCCACATAT...TAGACACTGAAAATGAAGGTTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AAAACAAACAACACCCAATCTGGGGGCGCAAGGACCATGCGTGTGAACTATCTTAGGATTTCTCTGATTTaGTTTATGGATTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: KTNNTQSGGARTMRVNYLRISLI*FMDSSR
Trigger: CCTCGAGGAATCCATAAACAAAATCAGAGAAATCCT...AAGATAGTTCACACGCATGGTCCTTGCGCCCCCAGATTGGGTGTTGTTTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGCSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CGAATGATTAGCCTAACAGCTACAACACCAGAAGTAGCCATAATTTTGGCACTGTGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: RMISLTATTPEVAIILALCSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...CAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGTTAGGCTAATCATTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204904.3
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCGACTTAGAGGTACAGTaGCTGGTTATGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGDLEVQ*LVMTGI
Trigger: GATCCCTGTCATAACCAGCAACTGTACCTCTAAGTC...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNLEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLELEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGTTCCGTTCTGACCAGTaGGAACTGGCACAATGGTTG +
Preference number: 5 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLFRSDQ*ELAQWL
Trigger: CAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAA...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAGACGAAGAGCCAGTCTaGCAAGTCATCCTTATGAAT +
Preference number: 5 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTDEEPV*QVILMN
Trigger: ATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTC...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ACACACACGGAACCTTCATTTTCAGTGTCTATTTCCCACGGGTTTTCTCCAACCTTCAGGATTGCTACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: THTEPSFSVSISHGFSPTFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTAGCAATCCTGAA...GGTTGGAGAAAACCCGTGGGAAATAGACACTGAAAATGAAGGTTCCGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTAAGAGATGAGCACAATTaGTGCTGCCTTTCTCACGTC +
Preference number: 5 (lower is better)
Translates to: ISQSPGLASVTFNTSKILRDEHN*CCLSHV
Trigger: GACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCT...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCACATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGTGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATGGTTATGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCATAACCA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNKVSGQ*YCLEIP
Trigger: TGGGATCTCCAAGCAATACAATTGGCCGGACACCTT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEKVSGQ*YCLEIP
Trigger: TGGGATCTCCAAGCAATACAATTGGCCGGACACCTT...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLKVSGQ*YCLEIP
Trigger: TGGGATCTCCAAGCAATACAATTGGCCGGACACCTT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: TPKSVWTEKYATVYQALAISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCAGCAGGGAGGTCTTGTaGTCCAAAGCCATCCTGCCT +
Preference number: 5 (lower is better)
Translates to: HLFFNATMRTLVALLILFSREVL*SKAILP
Trigger: AGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCT...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLRMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNRMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGCGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLRMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACGAATGGAATGGTCTTaGTCTCCGAGAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLERMEWS*SPRVSS
Trigger: GCTGGAAACTCTCGGAGACAAAGACCATTCCATTCG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACAATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTICGTI*LSVRVW
Trigger: CCAGACTCTAACACTAAGCAAGATTGTGCCACATAT...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CTTCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: LHFSVPRPCFRYIQYQQNICGTI*LSVRVW
Trigger: CCAGACTCTAACACTAAGCAAGATTGTGCCACATAT...ATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLECSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTGCTCCCAGTCATGCTaGTCATCTGACAGGATTTCT +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNCSQSC*SSDRIS
Trigger: AGAAATCCTGTCAGATGACAAGCATGACTGGGAGCA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCACAGAAGACGCAAGTGTaGAAAGAAGTTATCGTACTC +
Preference number: 5 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSQKTQV*KEVIVL
Trigger: GAGTACGATAACTTCTTTCAACACTTGCGTCTTCTG...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCAGAAGACGCAAGTGTaGAAAGAAGTTATCGTACTC +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPQKTQV*KEVIVL
Trigger: GAGTACGATAACTTCTTTCAACACTTGCGTCTTCTG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGACTTAGAGGTACAGTaGCTGGTTATGACAGGGATC +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLDLEVQ*LVMTGI
Trigger: GATCCCTGTCATAACCAGCAACTGTACCTCTAAGTC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GACAGGAGTTTTTGTGTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: DRSFCVLTESKVWSCYVLVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...CAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAACACAAAAACTCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLVVDTD*VLTVEP
Trigger: AGGCTCTACAGTTAGTACCAAATCTGTGTCGACGAC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGAACTGGCACAATGGTaGAGAACCTCTGCTACATCT +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNELAQW*RTSATS
Trigger: AGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGAACTGGCACAATGGTaGAGAACCTCTGCTACATCT +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLELAQW*RTSATS
Trigger: AGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ACCCCCAAGTCTGTATGGACTGAAAAATATGCTACTGTGTACCAAGCACTGGCTCTTGAGGTTTGGAGTTaGAGTCTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: TPKSVWTEKYATVYQALALEVWS*SLIHNK
Trigger: TTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG...AGCCAGTGCTTGGTACACAGTAGCATATTTTTCAGTCCATACAGACTTGGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTTTTAACTGAAAGTAAGGTCTGGTCCTGCTATGTTCTGAGCCCAAGTCCATCATTCAGGATTGCTACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: VLTESKVWSCYVLSPSPSFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTAGCAATCCTGAA...TGATGGACTTGGGCTCAGAACATAGCAGGACCAGACCTTACTTTCAGTTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACAGAGATGAGCACAATTaGTGCTGCCTTTCTCACGTC +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNRDEHN*CCLSHV
Trigger: GACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAAGAGATGAGCACAATTaGTGCTGCCTTTCTCACGTC +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLERDEHN*CCLSHV
Trigger: GACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCT...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTTTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCC +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPFLPSR*IGSFRS
Trigger: GGATCTAAATGAGCCAATCAAACGAGATGGCAAGAA...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCTCCTTGTGGGAGTCTTaGTGGGCTTCCAGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: HLFFNATMRTLVALLILFSLWES*WASRVF
Trigger: GAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGA...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTCGATTACGGAATAGATaGCCACTAAGCAAAACACAC +
Preference number: 5 (lower is better)
Translates to: FVCTVRMSGNALELFGYSRLRNR*PLSKTH
Trigger: GTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCG...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp TTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACGATTACGGAATAGATaGCCACTAAGCAAAACACAC +
Preference number: 5 (lower is better)
Translates to: FSVPRPCFRYIQYQQNSTRLRNR*PLSKTH
Trigger: GTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCG...TGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTCGATTACGGAATAGATaGCCACTAAGCAAAACACAC +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPRLRNR*PLSKTH
Trigger: GTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCG...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACGTCTGTCTATTAGACTaGGCAACACTGTGCCGATTT +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNVCLLD*ATLCRF
Trigger: AAATCGGCACAGTGTTGCCAAGTCTAATAGACAGAC...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGTCTGTCTATTAGACTaGGCAACACTGTGCCGATTT +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLVCLLD*ATLCRF
Trigger: AAATCGGCACAGTGTTGCCAAGTCTAATAGACAGAC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp TTTGTGTGTACTGTGAGGATGTCAGGTAATGCTCTGGAACTGTTCGGTTACAGTAGGATTTCTCTGATTTaGTTTATGGATTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: FVCTVRMSGNALELFGYSRISLI*FMDSSR
Trigger: CCTCGAGGAATCCATAAACAAAATCAGAGAAATCCT...ACTGTAACCGAACAGTTCCAGAGCATTACCTGACATCCTCACAGTACACACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTCTTTTTCTTGCCCAGACTGCAGTTCCACTTTGAGAACTCTAAGATACACCCTAGGATTTCTCTGATTTaGTTTATGGATTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: VFFLPRLQFHFENSKIHPRISLI*FMDSSR
Trigger: CCTCGAGGAATCCATAAACAAAATCAGAGAAATCCT...AGGGTGTATCTTAGAGTTCTCAAAGTGGAACTGCAGTCTGGGCAAGAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCCTGGAGGCATCACTGTaGGCATCATCATCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: HLFFNATMRTLVALLILFLEASL*ASSSEY
Trigger: GTACTCTGATGATGATGCCAACAGTGATGCCTCCAG...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAGACGAAGAGCCAGTCTaGCAAGTCATCCTTATGAAT +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEDEEPV*QVILMN
Trigger: ATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTC...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGACGAAGAGCCAGTCTaGCAAGTCATCCTTATGAAT +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLDEEPV*QVILMN
Trigger: ATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTC...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp TCATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCCTTGAGGTTTGGAGTTaGAGTCTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: SFLSPQALLPLHSIPAKFLEVWS*SLIHNK
Trigger: TTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG...GAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTTCAGGATTGCTACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTAGCAATCCTGAA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCAAGGTGTCCGGCCAATaGTATTGCTTGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: HLFFNATMRTLVALLILFKVSGQ*YCLEIP
Trigger: TGGGATCTCCAAGCAATACAATTGGCCGGACACCTT...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCTTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCC +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGFLPSR*IGSFRS
Trigger: GGATCTAAATGAGCCAATCAAACGAGATGGCAAGAA...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACGATTACGGAATAGATaGCCACTAAGCAAAACACAC +
Preference number: 5 (lower is better)
Translates to: ISQSPGLASVTFNTSKILRLRNR*PLSKTH
Trigger: GTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCG...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNICGTI*LSVRVW
Trigger: CCAGACTCTAACACTAAGCAAGATTGTGCCACATAT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLICGTI*LSVRVW
Trigger: CCAGACTCTAACACTAAGCAAGATTGTGCCACATAT...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp GACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAGGATTTCTCTGATTTaGTTTATGGATTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: DQNTDCNKLCAASLNGLGRISLI*FMDSSR
Trigger: CCTCGAGGAATCCATAAACAAAATCAGAGAAATCCT...GCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CGAATGATTAGCCTAACAGCTACAACACCAGAAGTAGCCATAATTTTGGCACTGAGGATTTCTCTGATTTaGTTTATGGATTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: RMISLTATTPEVAIILALRISLI*FMDSSR
Trigger: CCTCGAGGAATCCATAAACAAAATCAGAGAAATCCT...CAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGTTAGGCTAATCATTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204904.3
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCAGAAGACGCAAGTGTaGAAAGAAGTTATCGTACTC +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLQKTQV*KEVIVL
Trigger: GAGTACGATAACTTCTTTCAACACTTGCGTCTTCTG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp ATTTCTCAGTCCCCAGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACTTGAGGTTTGGAGTTaGAGTCTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: ISQSPGLASVTFNTSKILLEVWS*SLIHNK
Trigger: TTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG...TAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCTGGGGACTGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTTCAGGATTGCTACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTAGCAATCCTGAA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAATTCAGGATTGCTACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLEFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTAGCAATCCTGAA...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACTTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCC +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNFLPSR*IGSFRS
Trigger: GGATCTAAATGAGCCAATCAAACGAGATGGCAAGAA...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGTTCTTGCCATCTCGTTaGATTGGCTCATTTAGATCC +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLFLPSR*IGSFRS
Trigger: GGATCTAAATGAGCCAATCAAACGAGATGGCAAGAA...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGGGCAACATATCACAATCCTTCTaGCCATCTCGTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: QNTDCNKLCAASLNGLGNISQSF*PSRLIG
Trigger: GCCAATCAAACGAGATGGCAAGAAGGATTGTGATAT...GTTGCCCAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACGATTACGGAATAGATaGCCACTAAGCAAAACACAC +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLERLRNR*PLSKTH
Trigger: GTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCGATTACGGAATAGATaGCCACTAAGCAAAACACAC +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLRLRNR*PLSKTH
Trigger: GTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAAAGGATTTCTCTGATTTaGTTTATGGATTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLERISLI*FMDSSR
Trigger: CCTCGAGGAATCCATAAACAAAATCAGAGAAATCCT...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCGACGAAGAGCCAGTCTaGCAAGTCATCCTTATGAAT +
Preference number: 5 (lower is better)
Translates to: HLFFNATMRTLVALLILFDEEPV*QVILMN
Trigger: ATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTC...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp AGGCCTTGCTTCCGTTACATTCAATACCAGCAAAATTCTACACAAAAGCTGGAACTTGAGGTTTGGAGTTaGAGTCTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: RPCFRYIQYQQNSTQKLELEVWS*SLIHNK
Trigger: TTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG...TTCCAGCTTTTGTGTAGAATTTTGCTGGTATTGAATGTAACGGAAGCAAGGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS-3UTR CAA 90 bp AGGGACCAAAATACTGATTGTAATAAATTATGTGCGGCCTCCTTGAATGGACTGCTTGAGGTTTGGAGTTaGAGTCTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: RDQNTDCNKLCAASLNGLLEVWS*SLIHNK
Trigger: TTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG...CAGTCCATTCAAGGAGGCCGCACATAATTTATTACAATCAGTATTTTGGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS-3UTR CAA 90 bp CACCTTTTCTTTAATGCAACCATGAGAACTTTGGTGGCATTACTGATTCTATTCAGGATTTCTCTGATTTaGTTTATGGATTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: HLFFNATMRTLVALLILFRISLI*FMDSSR
Trigger: CCTCGAGGAATCCATAAACAAAATCAGAGAAATCCT...GAATAGAATCAGTAATGCCACCAAAGTTCTCATGGTTGCATTAAAGAAAAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000190571.7
CDS-3UTR CAA 90 bp GTAGCCATAATTTTGGCACTGTTCGGGATTAAATTAAAGATAGTTGGCATAATGCAGAAGACGCAAGTGTaGAAAGAAGTTATCGTACTC +
Preference number: 5 (lower is better)
Translates to: VAIILALFGIKLKIVGIMQKTQV*KEVIVL
Trigger: GAGTACGATAACTTCTTTCAACACTTGCGTCTTCTG...CATTATGCCAACTATCTTTAATTTAATCCCGAACAGTGCCAAAATTATGGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204904.3
CDS TCA 72 bp CGGCTGCTCTCACGGCTGGTATCGCGGCTGCACCCCTaGCTCATGCTGGGTCGGGGGATACGGCTGCTCCGT +
Preference number: 6 (lower is better)
Translates to: RLLSRLVSRLHP*LMLGRGIRLLR
Trigger: ACGGAGCAGCCGTATCCCCCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS GCA 72 bp GGTGTGGAGGCGACATTGGTGGTGCTCCCCGAGCTCTaGCGTCTCGTGCGGATCCGACCTGCATCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: GVEATLVVLPEL*RLVRIRPASRP
Trigger: AGGCCTGGATGCAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000189570.7
CDS CCA 72 bp CCCGAGCAGGGCTTGTATCGCGGCTGCTCTCACGGCTaGTATCGCGGCTGCACCCCTGACTCATGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: PEQGLYRGCSHG*YRGCTPDSCWV
Trigger: GACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGCGATACAAGCCCTGCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS GCA 72 bp TTGTATCGCGGCTGCTCTCACGGCTGGTATCGCGGCTaGACCCCTGACTCATGCTGGGTCGGGGGATACGGC +
Preference number: 6 (lower is better)
Translates to: LYRGCSHGWYRG*TPDSCWVGGYG
Trigger: GCCGTATCCCCCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGCGATACAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS GCA 72 bp GGTGTGGAGGCGACATTGGTGGTGCTCCCCGAGCTCTaGCGTCTCGTGCGGATCCGACCCTCCGCTTTAGTG +
Preference number: 6 (lower is better)
Translates to: GVEATLVVLPEL*RLVRIRPSALV
Trigger: CACTAAAGCGGAGGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191823.6
CDS GCA 72 bp TCTCACGGCTGGTATCGCGGCTGCACCCCTGACTCATaGTGGGTCGGGGGATACGGCTGCTCCGTGCTAATC +
Preference number: 6 (lower is better)
Translates to: SHGWYRGCTPDS*WVGGYGCSVLI
Trigger: GATTAGCACGGAGCAGCCGTATCCCCCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS GCA 72 bp CGACATTGGTGGTGCTCCCCGAGCTCTGCCGTCTCGTaGGGATCCGACCTGCATCCAGGCCTACGTACTCCA +
Preference number: 6 (lower is better)
Translates to: RHWWCSPSSAVS*GSDLHPGLRTP
Trigger: TGGAGTACGTAGGCCTGGATGCAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000189570.7
CDS CCA 72 bp CACGGCTGGTATCGCGGCTGCACCCCTGACTCATGCTaGGTCGGGGGATACGGCTGCTCCGTGCTAATCCAA +
Preference number: 6 (lower is better)
Translates to: HGWYRGCTPDSC*VGGYGCSVLIQ
Trigger: TTGGATTAGCACGGAGCAGCCGTATCCCCCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000190571.7
CDS GCA 72 bp TGGATCGCTGAGACTGTGAAACCACTTTGGCGCGACTaGGGCCCCGACTGTCGGAGGGTGTGGAGGCGACAT +
Preference number: 6 (lower is better)
Translates to: WIAETVKPLWRD*GPDCRRVWRRH
Trigger: ATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTCTCAGCGATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000188710.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
ENSMUST00000205176.2
CDS GCA 72 bp GGCAACACTGTGCCGATTTGCGCCTTGAACCGGTCCTaGAGCCTAGTCACCAGTGCCGACAGGATGTCCATG +
Preference number: 6 (lower is better)
Translates to: GNTVPICALNRS*SLVTSADRMSM
Trigger: CATGGACATCCTGTCGGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS CCA 72 bp CTCATGGCGTTCACAGAACCAGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCGAGTGGTGTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: LMAFTEPGIRPD*PSPNRSSGVKP
Trigger: GGGCTTCACACCACTCGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGTTCTGTGAACGCCATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS TCA 72 bp GATTCAGCAGTGGAGAGAGCACTAGTGGACCTGGAATaGCGTCGAGAGGCGAGTGGTGTGAAGCCCCGAGCA +
Preference number: 6 (lower is better)
Translates to: DSAVERALVDLE*RREASGVKPRA
Trigger: TGCTCGGGGCTTCACACCACTCGCCTCTCGACGTCATTCCAGGTCCACTAGTGCTCTCTCCACTGCTGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070989.14
ENSMUST00000188710.7
CDS GCA 72 bp TTGCGCCTTGAACCGGTCCTGCAGCCTAGTCACCAGTaGCGACAGGATGTCCATGCCCAAGAGAACCACCTT +
Preference number: 6 (lower is better)
Translates to: LRLEPVLQPSHQ*RQDVHAQENHL
Trigger: AAGGTGGTTCTCTTGGGCATGGACATCCTGTCGGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS CCA 72 bp CCAGGCCTACGTACTCCAAGTCTTCCCTCATGTGTCTaGACTCTAGGGACGCATAGGATCCTGGGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: PGLRTPSLPSCV*TLGTHRILGAV
Trigger: CACTGCCCCCAGGATCCTATGCGTCCCTAGAGTCCAGACACATGAGGGAAGACTTGGAGTACGTAGGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000189570.7
CDS CCA 72 bp TTTCTTCCAAGCTTCCTTCTCCAGGCCCAGAGCAGGTaGGAACTGACCTACCAGGGACATCCTCCCCTGCTC +
Preference number: 6 (lower is better)
Translates to: FLPSFLLQAQSR*ELTYQGHPPLL
Trigger: GAGCAGGGGAGGATGTCCCTGGTAGGTCAGTTCCCACCTGCTCTGGGCCTGGAGAAGGAAGCTTGGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192387.3
CDS CCA 72 bp AGGGCTCGTATCTCCTTCTCACAGGCTTCTTGCTCCTaGCGTCTCCTAACAGCAGAGCGTCAGCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: RARISFSQASCS*RLLTAERQPLL
Trigger: CAGCAGTGGCTGACGCTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGCCTGTGAGAAGGAGATACGAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000191823.6
CDS TCA 72 bp GACTCTCATGGCGTTCACAGAACCAGGGATTCGTCCTaGCTGGCCCAGCCCAAACCGATCGAGTGGTGTGAA +
Preference number: 6 (lower is better)
Translates to: DSHGVHRTRDSS*LAQPKPIEWCE
Trigger: TTCACACCACTCGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGTTCTGTGAACGCCATGAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000049404.13
ENSMUST00000186349.7
ENSMUST00000190571.7
CDS CCA 72 bp CTCATGGCGTTCACAGAACCAGGGATTCGTCCTGACTaGCCCAGCCCAAACCGATCTGACTGCCCAACAGAT +
Preference number: 6 (lower is better)
Translates to: LMAFTEPGIRPD*PSPNRSDCPTD
Trigger: ATCTGTTGGGCAGTCAGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGTTCTGTGAACGCCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070989.14
ENSMUST00000188710.7
ENSMUST00000205176.2
CDS GCA 72 bp TTCCATAGGGCTCGTATCTCCTTCTCACAGGCTTCTTaGTCCTGGCGTCTCCTAACAGCAGAGCGTCAGCCA +
Preference number: 6 (lower is better)
Translates to: FHRARISFSQAS*SWRLLTAERQP
Trigger: TGGCTGACGCTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGCCTGTGAGAAGGAGATACGAGCCCTATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000187713.7
ENSMUST00000191823.6
CDS CAA 72 bp AGGCAGAGGCAGATGCCCTCTCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGCATTCTGTCCCACACA +
Preference number: 6 (lower is better)
Translates to: RQRQMPSLVRKF*CLKPPSILSHT
Trigger: TGTGTGGGACAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAGAGAGGGCATCTGCCTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS GCA 72 bp TTTTTCTGTGCCCCTTACCAGAGCGTCAGCCACTGCTaGTTCCAGGTCAGTGCTGGTACTCAAGACTCTCAT +
Preference number: 6 (lower is better)
Translates to: FFCAPYQSVSHC*FQVSAGTQDSH
Trigger: ATGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCTCTGGTAAGGGGCACAGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070989.14
CDS GCA 72 bp TTCTTTTTCTGTGCCCCTTACCAGAGCGTCAGCCACTaGTGCTTCCAGGTCAGTGCTGGTACTCAAGACTCT +
Preference number: 6 (lower is better)
Translates to: FFFCAPYQSVSH*CFQVSAGTQDS
Trigger: AGAGTCTTGAGTACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCTCTGGTAAGGGGCACAGAAAAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070989.14
CDS CCA 72 bp GTAGCGAGTCCATCCACAAGCTTATCCAACAGGGTCTaGTCGTGCTCAAGGTCAGCAGACTTCTGTCTGTCT +
Preference number: 6 (lower is better)
Translates to: VASPSTSLSNRV*SCSRSADFCLS
Trigger: AGACAGACAGAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTTGGATAAGCTTGTGGATGGACTCGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS CAA 72 bp AGGCAGATGCCCTCTCTTGTGCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTGTCCCACACATACTGG +
Preference number: 6 (lower is better)
Translates to: RQMPSLVRKFLC*KPPSILSHTYW
Trigger: CCAGTATGTGTGGGACAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAGAGAGGGCATCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS CAA 72 bp CGAGATCGCTGGAGAGATCCTGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCTCTGGATGCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: RDRWRDPVVDTD*VLTVEPLDAVL
Trigger: CAGCACTGCATCCAGAGGCTCTACAGTTAGTACCAAATCTGTGTCGACGACAGGATCTCTCCAGCGATCTCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS CAA 90 bp GTTGCAATAAGGCAGAGGCAGATGCCCTCTCTTGTGCGGAAGTTCTaGTGTTTGAAGCCTCCGAGCATTCTGTCCCACACATACTGGGGA +
Preference number: 6 (lower is better)
Translates to: VAIRQRQMPSLVRKF*CLKPPSILSHTYWG
Trigger: TCCCCAGTATGTGTGGGACAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAGAGAGGGCATCTGCCTCTGCCTTATTGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS CAA 90 bp ATAAGGCAGAGGCAGATGCCCTCTCTTGTGCGGAAGTTCTTGTGTTaGAAGCCTCCGAGCATTCTGTCCCACACATACTGGGGATTAGCA +
Preference number: 6 (lower is better)
Translates to: IRQRQMPSLVRKFLC*KPPSILSHTYWGLA
Trigger: TGCTAATCCCCAGTATGTGTGGGACAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAGAGAGGGCATCTGCCTCTGCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS CAA 90 bp ATATCACTTCGAGATCGCTGGAGAGATCCTGTCGTCGACACAGATTaGGTACTAACTGTAGAGCCTCTGGATGCAGTGCTGCCAGTGGGA +
Preference number: 6 (lower is better)
Translates to: ISLRDRWRDPVVDTD*VLTVEPLDAVLPVG
Trigger: TCCCACTGGCAGCACTGCATCCAGAGGCTCTACAGTTAGTACCAAATCTGTGTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
ENSMUST00000191823.6
CDS TCA 72 bp CTGGTCGTGCTCAAGGTCAGCAGACTTCTGTCTGTCTaGGAAATAGTCTATGAGTTCCTGGCCAACCTGCAG +
Preference number: 6 (lower is better)
Translates to: LVVLKVSRLLSV*EIVYEFLANLQ
Trigger: CTGCAGGTTGGCCAGGAACTCATAGACTATTTCTCAGACAGACAGAAGTCTGCTGACCTTGAGCACGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS TCA 72 bp GATTCAGCAGTGGAGAGAGCACTAGTGGACCTGGAATaGCGTCGAGAGGCTAATCCAATCCGGTTAGGACTT +
Preference number: 6 (lower is better)
Translates to: DSAVERALVDLE*RREANPIRLGL
Trigger: AAGTCCTAACCGGATTGGATTAGCCTCTCGACGTCATTCCAGGTCCACTAGTGCTCTCTCCACTGCTGAATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205176.2
CDS GCA 72 bp AGTCCATCCACAAGCTTATCCAACAGGGTCTGGTCGTaGTCAAGGTCAGCAGACTTCTGTCTGTCTGAGAAA +
Preference number: 6 (lower is better)
Translates to: SPSTSLSNRVWS*SRSADFCLSEK
Trigger: TTTCTCAGACAGACAGAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTTGGATAAGCTTGTGGATGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000190733.7
ENSMUST00000191445.7
CDS CAA 90 bp TGGCTGTTGGGATCTCCCAGTAGGTTACATATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGGGCCCCAGAGGCATTGAGTGTTGCA +
Preference number: 6 (lower is better)
Translates to: WLLGSPSRLHICGTI*LSVRVWAPEALSVA
Trigger: TGCAACACTCAATGCCTCTGGGGCCCAGACTCTAACACTAAGCAAGATTGTGCCACATATATGTAACCTACTGGGAGATCCCAACAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS TCA 72 bp AGCATTCTGTCCCACACATACTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGCAGGGTTTGGTCTTGC +
Preference number: 6 (lower is better)
Translates to: SILSHTYWGLAA*SMIFSSRVWSC
Trigger: GCAAGACCAAACCCTGCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCAGTATGTGTGGGACAGAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS TCA 72 bp TGCTCGACTACGCTGACGCTGGGACTTTCTCACGTCTaGACTCTTTGGTTCTGTAGTCCATGTTATGATCCT +
Preference number: 6 (lower is better)
Translates to: CSTTLTLGLSHV*TLWFCSPCYDP
Trigger: AGGATCATAACATGGACTACAGAACCAAAGAGTTCAGACGTGAGAAAGTCCCAGCGTCAGCGTAGTCGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192387.3
CDS GCA 72 bp ACCTACATGTCTATAAATCTCCACCAGACTGTTTATTaGTGCGTCTCGAACCTGGCTGTTGGGATCTCCCAG +
Preference number: 6 (lower is better)
Translates to: TYMSINLHQTVY*CVSNLAVGISQ
Trigger: CTGGGAGATCCCAACAGCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGGAGATTTATAGACATGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS CCA 72 bp CCAGACTGTTTATTGCTGCGTCTCGAACCTGGCTGTTaGGATCTCCCAGTAGGTTACATATATGTGGCACAA +
Preference number: 6 (lower is better)
Translates to: PDCLLLRLEPGC*DLPVGYIYVAQ
Trigger: TTGTGCCACATATATGTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAGACGCAGCAATAAACAGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS CAA 72 bp GGATCTCCCAGTAGGTTACATATATGTGGCACAATCTaGCTTAGTGTTAGAGTCTGGGCCCCAGAGGCATTG +
Preference number: 6 (lower is better)
Translates to: GSPSRLHICGTI*LSVRVWAPEAL
Trigger: CAATGCCTCTGGGGCCCAGACTCTAACACTAAGCAAGATTGTGCCACATATATGTAACCTACTGGGAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS CAA 72 bp ACCAGACTGTTTATTGCTGCGTCTCGAACCTGGCTGTaGGGATCTCCCAGTAGGTTACATATATGTGGCACA +
Preference number: 6 (lower is better)
Translates to: TRLFIAASRTWL*GSPSRLHICGT
Trigger: TGTGCCACATATATGTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAGACGCAGCAATAAACAGTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS CAA 72 bp CACCTACATGTCTATAAATCTCCACCAGACTGTTTATaGCTGCGTCTCGAACCTGGCTGTTGGGATCTCCCA +
Preference number: 6 (lower is better)
Translates to: HLHVYKSPPDCL*LRLEPGCWDLP
Trigger: TGGGAGATCCCAACAGCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGGAGATTTATAGACATGTAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS TCA 72 bp CAGCAATCTTGCTGTGAGGGTCGGCAAACATTCGGGTaGAAATCTCACACAGTCTCTTCAATTCTACTCGAC +
Preference number: 6 (lower is better)
Translates to: QQSCCEGRQTFG*KSHTVSSILLD
Trigger: GTCGAGTAGAATTGAAGAGACTGTGTGAGATTTTCACCCGAATGTTTGCCGACCCTCACAGCAAGATTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185405.7
CDS CCA 72 bp CATATATGTGGCACAATCTTGCTTAGTGTTAGAGTCTaGGCCCCAGAGGCATTGAGTGTTGCAATAAGGCAG +
Preference number: 6 (lower is better)
Translates to: HICGTILLSVRV*APEALSVAIRQ
Trigger: CTGCCTTATTGCAACACTCAATGCCTCTGGGGCCCAGACTCTAACACTAAGCAAGATTGTGCCACATATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7
CDS CCA 72 bp ATCTCCACCAGACTGTTTATTGCTGCGTCTCGAACCTaGCTGTTGGGATCTCCCAGTAGGTTACATATATGT +
Preference number: 6 (lower is better)
Translates to: ISTRLFIAASRT*LLGSPSRLHIC
Trigger: ACATATATGTAACCTACTGGGAGATCCCAACAGCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000049404.13
ENSMUST00000070989.14
ENSMUST00000165223.8
ENSMUST00000178710.8
ENSMUST00000185405.7
ENSMUST00000186349.7
ENSMUST00000187713.7
ENSMUST00000188710.7
ENSMUST00000189262.7
ENSMUST00000189570.7
ENSMUST00000189738.7
ENSMUST00000190571.7
ENSMUST00000191445.7