Pregenerated sensors for CKMT1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000000308

Ensembl transcript IDs: ENSMUST00000128612.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR TCA 90 bp	ATTAGAGGTAGGCTAAATCTTGATAATCTCTTCAGGGATTTCCAGGGTCTTTTCGCAGAATCCCGGCGGTaGGAGACCCAGCTCCAGCCA	+
Preference number: 4 (lower is better) Translates to: IRGRLNLDNLFRDFQGLFAESRR*ETQLQP Trigger: TGGCTGGAGCTGGGTCTCTCACCGCCGGGATTCTGC...GAAAAGACCCTGGAAATCCCTGAAGAGATTATCAAGATTTAGCCTACCTCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128612.2
CDS-3UTR GCA 90 bp	ATTAGAGGTAGGCTAAATCTTGATAATCTCTTCAGGGATTTCCAGGGTCTTTTCCCTTGTCTACAGAGTTaGTTTTCTCTAGTGAGCATA	+
Preference number: 4 (lower is better) Translates to: IRGRLNLDNLFRDFQGLFPCLQS*FSLVSI Trigger: TATGCTCACTAGAGAAAAGCAACTCTGTAGACAAGG...GAAAAGACCCTGGAAATCCCTGAAGAGATTATCAAGATTTAGCCTACCTCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128612.2
CDS-3UTR CAA 90 bp	ATTAGAGGTAGGCTAAATCTTGATAATCTCTTCAGGGATTTCCAGGGTCTTTTCCCCTTGTCTACAGAGTaGCTTTTCTCTAGTGAGCAT	+
Preference number: 5 (lower is better) Translates to: IRGRLNLDNLFRDFQGLFPLSTE*LFSSEH Trigger: ATGCTCACTAGAGAAAAGCAACTCTGTAGACAAGGG...GAAAAGACCCTGGAAATCCCTGAAGAGATTATCAAGATTTAGCCTACCTCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128612.2

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