Pregenerated sensors for CKM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030399Ensembl transcript IDs: ENSMUST00000003643.3, ENSMUST00000208710.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATTTAAGGCAGGGCATGGAGAAGCAGCCGGCGCTCCGGAGCGCCTaGGAAGCAGGTGGGCGGGGCTCCGGAGAGGCAGGTTCTCATTGG | + |
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Preference number: 1 (lower is better) Translates to: YLRQGMEKQPALRSA*EAGGRGSGEAGSHW Trigger: CCAATGAGAACCTGCCTCTCCGGAGCCCCGCCCACCTGCTTCTCAGGCGCTCCGGAGCGCCGGCTGCTTCTCCATGCCCTGCCTTAAATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| 3UTR CCA 90 bp | GGCAGGTTCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTaGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: GRFSLARTQRTEPND*TSRRRGTSAHCRLV Trigger: CACCAGCCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| 3UTR TCA 90 bp | GAGAGGCAGGTTCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATaGTTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: ERQVLIGQNPEDRAQ*LDFQEAGHQRTLQA Trigger: AGCCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCTGCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| 3UTR CAA 90 bp | CGCCTGAGAAGCAGGTGGGCGGGGCTCCGGAGAGGCAGGTTCTCATaGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: RLRSRWAGLRRGRFS*ARTQRTEPNDWTSR Trigger: CCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCTGCCTCTCCGGAGCCCCGCCCACCTGCTTCTCAGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| 3UTR-3UTR CCA 90 bp | ACGGACTTTTATTTAAGGCAGGGCATGGAGAAGCAGCCGGCGCTCCGGAGCGCCGAGGCAGGTTCTCATTaGCCAGAACCCAGAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: TDFYLRQGMEKQPALRSAEAGSH*PEPRGQ Trigger: CTGTCCTCTGGGTTCTGGCCAATGAGAACCTGCCTC...GGCGCTCCGGAGCGCCGGCTGCTTCTCCATGCCCTGCCTTAAATAAAAGTCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGTTGGTTCTACTGCCTTGTCACAAGTTCTGGGACCAAACACGTCAGGTTAATGGGTATGCGCCTGTaGCCCCAGCATGTGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: ESWFYCLVTSSGTKHVRLMGMRL*PQHVDR Trigger: TCTGTCCACATGCTGGGGTCACAGGCGCATACCCAT...TAACCTGACGTGTTTGGTCCCAGAACTTGTGACAAGGCAGTAGAACCAACTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGTTGGTTCTACTGCCTTGTCACAAGTTCTGGGACCAAACACGTCAGGTTATGGGCATGGTGGATCTaGCTGCCATTCCAGAATTCA | + |
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Preference number: 2 (lower is better) Translates to: ESWFYCLVTSSGTKHVRLWAWWI*LPFQNS Trigger: TGAATTCTGGAATGGCAGGCAGATCCACCATGCCCA...TAACCTGACGTGTTTGGTCCCAGAACTTGTGACAAGGCAGTAGAACCAACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| 3UTR CAA 90 bp | TGTAGTATCTGTGAAAGGGAACACTTTTGTCAAGAGAACTCAGTTTaGAGAGTTGGTTCTACTGCCTTGTCACAAGTTCTGGGACCAAAC | + |
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Preference number: 2 (lower is better) Translates to: CSICEREHFCQENSV*RVGSTALSQVLGPN Trigger: GTTTGGTCCCAGAACTTGTGACAAGGCAGTAGAACCAACTCTCAAAACTGAGTTCTCTTGACAAAAGTGTTCCCTTTCACAGATACTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| 3UTR TCA 72 bp | CAGGGCATGGAGAAGCAGCCGGCGCTCCGGAGCGCCTaGGAAGCAGGTGGGCGGGGCTCCGGAGAGGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: QGMEKQPALRSA*EAGGRGSGEAG Trigger: ACCTGCCTCTCCGGAGCCCCGCCCACCTGCTTCTCAGGCGCTCCGGAGCGCCGGCTGCTTCTCCATGCCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| 3UTR CCA 72 bp | GCAGGTGGGCGGGGCTCCGGAGAGGCAGGTTCTCATTaGCCAGAACCCAGAGGACAGAGCCCAATGATTGGA | + |
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Preference number: 3 (lower is better) Translates to: AGGRGSGEAGSH*PEPRGQSPMIG Trigger: TCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCTGCCTCTCCGGAGCCCCGCCCACCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| 3UTR CCA 72 bp | TCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTaGACTTCCAGGAGGCGGGGCACCAGCGCACACTGC | + |
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Preference number: 3 (lower is better) Translates to: SLARTQRTEPND*TSRRRGTSAHC Trigger: GCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| 3UTR TCA 72 bp | GTTCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATaGTTGGACTTCCAGGAGGCGGGGCACCAGCGCACA | + |
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Preference number: 3 (lower is better) Translates to: VLIGQNPEDRAQ*LDFQEAGHQRT Trigger: TGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| 3UTR GCA 72 bp | TCTACCGACTGCCGGCTAAGCTGGGCATGGTGGATCTaGCTGCCATTCCAGAATTCAGGAGGCAGATTCAGG | + |
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Preference number: 3 (lower is better) Translates to: STDCRLSWAWWI*LPFQNSGGRFR Trigger: CCTGAATCTGCCTCCTGAATTCTGGAATGGCAGGCAGATCCACCATGCCCAGCTTAGCCGGCAGTCGGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| 3UTR CCA 72 bp | CCAGCATGTGGACAGAAACAGGCTGACCCTGGGTCCTaGGTGACCCTTCACTTAGCTGAGACAGTGAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: PACGQKQADPGS*VTLHLAETVSV Trigger: GACACTCACTGTCTCAGCTAAGTGAAGGGTCACCCAGGACCCAGGGTCAGCCTGTTTCTGTCCACATGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| 3UTR CCA 72 bp | GAGTGTCAGGTTCAGCGAAGAGACTGTCAAAACAGGTaGATGCCAGGTGTGGTAGCACATGCCCTTAGACCC | + |
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Preference number: 3 (lower is better) Translates to: ECQVQRRDCQNR*MPGVVAHALRP Trigger: GGGTCTAAGGGCATGTGCTACCACACCTGGCATCCACCTGTTTTGACAGTCTCTTCGCTGAACCTGACACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| 3UTR GCA 72 bp | TTGTCAAGAGAACTCAGTTTTGAGAGTTGGTTCTACTaGCTTGTCACAAGTTCTGGGACCAAACACGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: LSRELSFESWFY*LVTSSGTKHVR Trigger: CCTGACGTGTTTGGTCCCAGAACTTGTGACAAGGCAGTAGAACCAACTCTCAAAACTGAGTTCTCTTGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| 3UTR TCA 72 bp | GTGAAAGGGAACACTTTTGTCAAGAGAACTCAGTTTTaGGAGTTGGTTCTACTGCCTTGTCACAAGTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: VKGNTFVKRTQF*ELVLLPCHKFW Trigger: CCAGAACTTGTGACAAGGCAGTAGAACCAACTCTCAAAACTGAGTTCTCTTGACAAAAGTGTTCCCTTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| 3UTR CCA 72 bp | GGAACACTTTTGTCAAGAGAACTCAGTTTTGAGAGTTaGTTCTACTGCCTTGTCACAAGTTCTGGGACCAAA | + |
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Preference number: 3 (lower is better) Translates to: GTLLSRELSFES*FYCLVTSSGTK Trigger: TTTGGTCCCAGAACTTGTGACAAGGCAGTAGAACCAACTCTCAAAACTGAGTTCTCTTGACAAAAGTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| CDS-3UTR GCA 90 bp | ACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGCTGGTGCGCCACGCCCTGCTCCGCGCAGCCCGGTaGCCAGGTTGGAGGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TSRRRGTSAHCRLVRHALLRAAR*PGWRGR Trigger: CCTGCCCCTCCAACCTGGGCACCGGGCTGCGCGGAG...CAGGGCGTGGCGCACCAGCCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR GCA 90 bp | AGAAGCAGCCGGCGCTCCGGAGCGCCTGAGAAGCAGGTGGGCGGGGCTCCGGAGTTCGCCAGCTTCACGTaGACGCCTCCGCGCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: RSSRRSGAPEKQVGGAPEFASFT*TPPRSP Trigger: CGGGCTGCGCGGAGGCGTGCACGTGAAGCTGGCGAA...CTCCGGAGCCCCGCCCACCTGCTTCTCAGGCGCTCCGGAGCGCCGGCTGCTTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | GCAGCCGGCGCTCCGGAGCGCCTGAGAAGCAGGTGGGCGGGGCTCCGGAGAGGCCTGTTCGACTTCGGATaGGCCCAGCCGATCGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: AAGAPERLRSRWAGLRRGLFDFG*AQPIGV Trigger: AACGCCGATCGGCTGGGCTCATCCGAAGTCGAACAG...GCCTCTCCGGAGCCCCGCCCACCTGCTTCTCAGGCGCTCCGGAGCGCCGGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | GCAGCCGGCGCTCCGGAGCGCCTGAGAAGCAGGTGGGCGGGGCTCCGGAGAGGCGGTAGTACTTGCCCTTaGACTCGCCCGTCAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: AAGAPERLRSRWAGLRRGGSTCP*TRPSGC Trigger: ACAGCCTGACGGGCGAGTTCAAGGGCAAGTACTACC...GCCTCTCCGGAGCCCCGCCCACCTGCTTCTCAGGCGCTCCGGAGCGCCGGCTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR GCA 90 bp | AGCCCAATGATTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGCTGGCTCCGCGCAGCCCGGTaGCCAGGTTGGAGGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SPMIGLPGGGAPAHTAGWLRAAR*PGWRGR Trigger: CCTGCCCCTCCAACCTGGGCACCGGGCTGCGCGGAG...CCAGCCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR GCA 90 bp | TTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGCTGGTGCGCCACGCGGACAGCTTCTCCACTaGACGGCGCTCTCCACGGGA | + |
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Preference number: 4 (lower is better) Translates to: LDFQEAGHQRTLQAGAPRGQLLH*TALSTG Trigger: TCCCGTGGAGAGCGCCGTGCAGTGGAGAAGCTGTCC...GCGTGGCGCACCAGCCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR GCA 90 bp | CCAATGATTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGCTGGTGCTTCGCCAGCTTCACGTaGACGCCTCCGCGCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: PMIGLPGGGAPAHTAGWCFASFT*TPPRSP Trigger: CGGGCTGCGCGGAGGCGTGCACGTGAAGCTGGCGAA...GCACCAGCCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | GCAGCCGGCGCTCCGGAGCGCCTGAGAAGCAGGTGGGCGGGGCTCCGGAGAGGCGGTGACCAGCCTTCTTaGAGATCTCCTCAATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AAGAPERLRSRWAGLRRGGDQPS*RSPQSS Trigger: AGAAGATTGAGGAGATCTTCAAGAAGGCTGGTCACC...GCCTCTCCGGAGCCCCGCCCACCTGCTTCTCAGGCGCTCCGGAGCGCCGGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | GCAGCCGGCGCTCCGGAGCGCCTGAGAAGCAGGTGGGCGGGGCTCCGGAGAGGCGCTTGTAGTTCAGCTTaGACTTGTTGTGGGTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: AAGAPERLRSRWAGLRRGACSSA*TCCGCC Trigger: GCAACACCCACAACAAGTTCAAGCTGAACTACAAGC...GCCTCTCCGGAGCCCCGCCCACCTGCTTCTCAGGCGCTCCGGAGCGCCGGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| CDS-3UTR CCA 90 bp | GAAGCAGCCGGCGCTCCGGAGCGCCTGAGAAGCAGGTGGGCGGGGCTCCGGAGACCCTTGAGGTTCTCGTaGTTGAGGTCGGTCTTATGC | + |
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Preference number: 4 (lower is better) Translates to: EAAGAPERLRSRWAGLRRPLRFS*LRSVLC Trigger: GCATAAGACCGACCTCAACCACGAGAACCTCAAGGG...TCTCCGGAGCCCCGCCCACCTGCTTCTCAGGCGCTCCGGAGCGCCGGCTGCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR GCA 90 bp | CAGAGCCCAATGATTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGCGGACAGCTTCTCCACTaGACGGCGCTCTCCACGGGA | + |
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Preference number: 4 (lower is better) Translates to: QSPMIGLPGGGAPAHTAGGQLLH*TALSTG Trigger: TCCCGTGGAGAGCGCCGTGCAGTGGAGAAGCTGTCC...GCCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | CCAATGATTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGCTGGTGCGCAGAGTGTAACCCTTaGTGCTGCGGCCAGTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: PMIGLPGGGAPAHTAGWCAECNP*CCGQCA Trigger: TGCGCACTGGCCGCAGCATCAAGGGTTACACTCTGC...GCACCAGCCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | TTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGCTGGTGCGCCACGCGGAAGTGGTCATCAATaGGCTGCTGCTGTTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LDFQEAGHQRTLQAGAPRGSGHQ*AAAVPA Trigger: AGCAGGAACAGCAGCAGCTCATTGATGACCACTTCC...GCGTGGCGCACCAGCCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CCA 90 bp | TTTAAGGCAGGGCATGGAGAAGCAGCCGGCGCTCCGGAGCGCCTGAGAAGCAGGCCGCCATGGCGGTCCTaGATGATGGGATCAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: FKAGHGEAAGAPERLRSRPPWRS*MMGSNR Trigger: CCTGTTTGATCCCATCATCCAGGACCGCCATGGCGG...CCTGCTTCTCAGGCGCTCCGGAGCGCCGGCTGCTTCTCCATGCCCTGCCTTAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| 3UTR CAA 72 bp | AGCAGGTGGGCGGGGCTCCGGAGAGGCAGGTTCTCATaGGCCAGAACCCAGAGGACAGAGCCCAATGATTGG | + |
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Preference number: 4 (lower is better) Translates to: SRWAGLRRGRFS*ARTQRTEPNDW Trigger: CCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCTGCCTCTCCGGAGCCCCGCCCACCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | TTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTCCAGGAGGCGGGGCCTGTTCGACTTCGGATaGGCCCAGCCGATCGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: LARTQRTEPNDWTSRRRGLFDFG*AQPIGV Trigger: AACGCCGATCGGCTGGGCTCATCCGAAGTCGAACAG...GCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR GCA 90 bp | TTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTCCAGGAGGCGGGGCTGTCGTTGTGCCAGATaGCACGGGCATCGGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LARTQRTEPNDWTSRRRGCRCAR*HGHRAS Trigger: ACTGGCCCGATGCCCGTGGCATCTGGCACAACGACA...GCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CCA 90 bp | CAGAGCCCAATGATTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGCCCCTTGAGGTTCTCGTaGTTGAGGTCGGTCTTATGC | + |
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Preference number: 4 (lower is better) Translates to: QSPMIGLPGGGAPAHTAGPLRFS*LRSVLC Trigger: GCATAAGACCGACCTCAACCACGAGAACCTCAAGGG...GCCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR GCA 90 bp | ACAGAGCCCAATGATTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGCAAACTTGGGGTGCTTaGTCAGGTTCGCCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TEPNDWTSRRRGTSAHCRQTWGA*SGSPAS Trigger: TGAAGCTGGCGAACCTGAGCAAGCACCCCAAGTTTG...CCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CCA 90 bp | ACAGAGCCCAATGATTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGGGATCATGTCGTCGATaGACTGGCCCTTTTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: TEPNDWTSRRRGTSAHCRGSCRR*TGPFPA Trigger: AGCTGGAAAAGGGCCAGTCCATCGACGACATGATCC...CCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | CAGAGCCCAATGATTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGCGGTGACCAGCCTTCTTaGAGATCTCCTCAATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QSPMIGLPGGGAPAHTAGGDQPS*RSPQSS Trigger: AGAAGATTGAGGAGATCTTCAAGAAGGCTGGTCACC...GCCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | AGGTTCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTCCAGGGCAGAGTGTAACCCTTaGTGCTGCGGCCAGTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: RFSLARTQRTEPNDWTSRAECNP*CCGQCA Trigger: TGCGCACTGGCCGCAGCATCAAGGGTTACACTCTGC...CCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CCA 90 bp | TCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTCCAGGAGGCCCGCCATGGCGGTCCTaGATGATGGGATCAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: SHWPEPRGQSPMIGLPGGPPWRS*MMGSNR Trigger: CCTGTTTGATCCCATCATCCAGGACCGCCATGGCGG...GCCTCCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | GAGGCAGGTTCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTGGTAGTACTTGCCCTTaGACTCGCCCGTCAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EAGSHWPEPRGQSPMIGLGSTCP*TRPSGC Trigger: ACAGCCTGACGGGCGAGTTCAAGGGCAAGTACTACC...AAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | CTTTTATTTAAGGCAGGGCATGGAGAAGCAGCCGGCGCTCCGGAGCGCCTGAGATTCCACATGAAGGGGTaGCCAGCCTTCTTGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: LLFKAGHGEAAGAPERLRFHMKG*PAFLKI Trigger: GATCTTCAAGAAGGCTGGTCACCCCTTCATGTGGAA...TCTCAGGCGCTCCGGAGCGCCGGCTGCTTCTCCATGCCCTGCCTTAAATAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | TCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTCCAGGAGGCGCAGACGAAGGCGAGTaGGAATCTCCTCAAACTTGG | + |
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Preference number: 4 (lower is better) Translates to: SHWPEPRGQSPMIGLPGGADEGE*ESPQTW Trigger: CCAAGTTTGAGGAGATTCTCACTCGCCTTCGTCTGC...GCCTCCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CCA 90 bp | GCTAAGCTGGGCATGGTGGATCTGCCTGCCATTCCAGAATTCAGGAGGCAGATTGTGCTTGCTGAGGTCTaGGTACTCCTCCTGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: AKLGMVDLPAIPEFRRQIVLAEV*VLLLRL Trigger: AAGCCTCAGGAGGAGTACCCAGACCTCAGCAAGCAC...AATCTGCCTCCTGAATTCTGGAATGGCAGGCAGATCCACCATGCCCAGCTTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | TCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTCCAGGAGGCTTCCACATGAAGGGGTaGCCAGCCTTCTTGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: SHWPEPRGQSPMIGLPGGFHMKG*PAFLKI Trigger: GATCTTCAAGAAGGCTGGTCACCCCTTCATGTGGAA...GCCTCCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR TCA 90 bp | GCAGGTTCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTCCAGCAGACGAAGGCGAGTaGGAATCTCCTCAAACTTGG | + |
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Preference number: 4 (lower is better) Translates to: AGSHWPEPRGQSPMIGLPADEGE*ESPQTW Trigger: CCAAGTTTGAGGAGATTCTCACTCGCCTTCGTCTGC...TGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR GCA 90 bp | TCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTCCAGGAGGCGTTCCTGCTCCGTCATaGTCTTCAGAGGGTAGTACT | + |
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Preference number: 4 (lower is better) Translates to: SHWPEPRGQSPMIGLPGGVPAPS*SSEGST Trigger: AGTACTACCCTCTGAAGAGCATGACGGAGCAGGAAC...GCCTCCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR GCA 90 bp | AGAGGCAGGTTCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTCAAACTTGGGGTGCTTaGTCAGGTTCGCCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RGRFSLARTQRTEPNDWTQTWGA*SGSPAS Trigger: TGAAGCTGGCGAACCTGAGCAAGCACCCCAAGTTTG...AGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCTGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CCA 90 bp | AGGTTCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTCCAGGGGATCATGTCGTCGATaGACTGGCCCTTTTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RFSLARTQRTEPNDWTSRGSCRR*TGPFPA Trigger: AGCTGGAAAAGGGCCAGTCCATCGACGACATGATCC...CCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGTTCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTTGTCCACCCCAGTCTaGATGACATCGTCCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: RGRFSLARTQRTEPNDWTLSTPV*MTSSRV Trigger: CACTCTGGACGATGTCATCCAGACTGGGGTGGACAA...AGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCTGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| CDS-3UTR CCA 90 bp | GGTTCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTTCCAGGAGAATCTCCTCAAACTTaGGGTGCTTGCTCAGGTTCG | + |
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Preference number: 4 (lower is better) Translates to: GSHWPEPRGQSPMIGLPGESPQT*GACSGS Trigger: CGAACCTGAGCAAGCACCCCAAGTTTGAGGAGATTC...TCCTGGAAGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGTTCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGACTATGTCGTCGATGGACTaGCCCTTTTCCAGCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RGRFSLARTQRTEPNDWTMSSMD*PFSSFF Trigger: GAAGAAGCTGGAAAAGGGCCAGTCCATCGACGACAT...AGTCCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCTGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR GCA 90 bp | CTAGTCTACGTAGTGAGTTCCAGGACAACAATGACATGTAGAGAGACCCTGTCTGTTCCTGCTCCGTCATaGTCTTCAGAGGGTAGTACT | + |
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Preference number: 4 (lower is better) Translates to: LVYVVSSRTTMTCRETLSVPAPS*SSEGST Trigger: AGTACTACCCTCTGAAGAGCATGACGGAGCAGGAAC...AGACAGGGTCTCTCTACATGTCATTGTTGTCCTGGAACTCACTACGTAGACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| 3UTR CAA 72 bp | TGTGAAAGGGAACACTTTTGTCAAGAGAACTCAGTTTaGAGAGTTGGTTCTACTGCCTTGTCACAAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: CEREHFCQENSV*RVGSTALSQVL Trigger: CAGAACTTGTGACAAGGCAGTAGAACCAACTCTCAAAACTGAGTTCTCTTGACAAAAGTGTTCCCTTTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| CDS-3UTR CAA 90 bp | AGAAGCAGCCGGCGCTCCGGAGCGCCTGAGAAGCAGGTGGGCGGGGCTCCGGAGTCAAACTTGGGGTGCTaGCTCAGGTTCGCCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RSSRRSGAPEKQVGGAPESNLGC*LRFASF Trigger: GAAGCTGGCGAACCTGAGCAAGCACCCCAAGTTTGA...CTCCGGAGCCCCGCCCACCTGCTTCTCAGGCGCTCCGGAGCGCCGGCTGCTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CAA 90 bp | ACAGAGCCCAATGATTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCAGGTCGCCCGTCAGGCTGTaGAGAGCTTCCACGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: TEPNDWTSRRRGTSAHCRSPVRL*RASTDS Trigger: GCTGTCCGTGGAAGCTCTCAACAGCCTGACGGGCGA...CCTGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS TCA 90 bp | AAGCTTCACGCCATCCACCACCAGCTGCACCTGTTCGACTTCGGATaGGCCCAGCCGATCGGCGTTGGAGATGTCGAACACGGCGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: KLHAIHHQLHLFDFG*AQPIGVGDVEHGAH Trigger: GTGGGCGCCGTGTTCGACATCTCCAACGCCGATCGGCTGGGCTCATCCGAAGTCGAACAGGTGCAGCTGGTGGTGGATGGCGTGAAGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS GCA 90 bp | CGCTTCTGCAGACGAAGGCGAGTGAGAATCTCCTCAAACTTGGGGTaGTTGCTCAGGTTCGCCAGCTTCACGTGCACGCCTCCGCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RFCRRRRVRISSNLG*LLRFASFTCTPPRS Trigger: GCTGCGCGGAGGCGTGCACGTGAAGCTGGCGAACCTGAGCAAGCACCCCAAGTTTGAGGAGATTCTCACTCGCCTTCGTCTGCAGAAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CAA 90 bp | CGGAGAGGCAGGTTCTCATTGGCCAGAACCCAGAGGACAGAGCCCAATGATTGGTCGCCCGTCAGGCTGTaGAGAGCTTCCACGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: RRGRFSLARTQRTEPNDWSPVRL*RASTDS Trigger: GCTGTCCGTGGAAGCTCTCAACAGCCTGACGGGCGA...CCAATCATTGGGCTCTGTCCTCTGGGTTCTGGCCAATGAGAACCTGCCTCTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CAA 90 bp | GGACAGAGCCCAATGATTGGACTTCCAGGAGGCGGGGCACCAGCGCACACTGCATTCAGCTTGAACTTGTaGTGGGTGTTGCCGAACGGC | + |
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Preference number: 5 (lower is better) Translates to: GQSPMIGLPGGGAPAHTAFSLNL*WVLPNG Trigger: GCCGTTCGGCAACACCCACAACAAGTTCAAGCTGAA...TGCAGTGTGCGCTGGTGCCCCGCCTCCTGGAAGTCCAATCATTGGGCTCTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| CDS GCA 90 bp | TTCTTCTCCATCTCCACCATAAGCTTCACGCCATCCACCACCAGCTaGACCTGTTCGACTTCGGATGAGCCCAGCCGATCGGCGTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: FFSISTISFTPSTTS*TCSTSDEPSRSALE Trigger: CTCCAACGCCGATCGGCTGGGCTCATCCGAAGTCGAACAGGTGCAGCTGGTGGTGGATGGCGTGAAGCTTATGGTGGAGATGGAGAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CAA 90 bp | CTTTTATTTAAGGCAGGGCATGGAGAAGCAGCCGGCGCTCCGGAGCGCCTGAGATTGAGGTTCTCGTGGTaGAGGTCGGTCTTATGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LLFKAGHGEAAGAPERLRLRFSW*RSVLCL Trigger: CAAGCATAAGACCGACCTCAACCACGAGAACCTCAA...TCTCAGGCGCTCCGGAGCGCCGGCTGCTTCTCCATGCCCTGCCTTAAATAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS-3UTR CAA 90 bp | AATGACAGGCATGGGTATGCGCCTGTGACCCCAGCATGTGGACAGAAACAGGCTTTGAGGTTCTCGTGGTaGAGGTCGGTCTTATGCTTG | + |
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Preference number: 5 (lower is better) Translates to: NDRHGYAPVTPACGQKQALRFSW*RSVLCL Trigger: CAAGCATAAGACCGACCTCAACCACGAGAACCTCAA...AGCCTGTTTCTGTCCACATGCTGGGGTCACAGGCGCATACCCATGCCTGTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208710.2 |
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| CDS GCA 72 bp | CAGGCTGTTGAGAGCTTCCACGGACAGCTTCTCCACTaGACGGCGCTCTCCACGGGAGCAGTGCGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: QAVESFHGQLLH*TALSTGAVRRQ Trigger: CTGCCTCCGCACTGCTCCCGTGGAGAGCGCCGTGCAGTGGAGAAGCTGTCCGTGGAAGCTCTCAACAGCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS CAA 90 bp | TTCTGCAGACGAAGGCGAGTGAGAATCTCCTCAAACTTGGGGTGCTaGCTCAGGTTCGCCAGCTTCACGTGCACGCCTCCGCGCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: FCRRRRVRISSNLGC*LRFASFTCTPPRSP Trigger: CGGGCTGCGCGGAGGCGTGCACGTGAAGCTGGCGAACCTGAGCAAGCACCCCAAGTTTGAGGAGATTCTCACTCGCCTTCGTCTGCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS CAA 72 bp | CGAAGGCGAGTGAGAATCTCCTCAAACTTGGGGTGCTaGCTCAGGTTCGCCAGCTTCACGTGCACGCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: RRRVRISSNLGC*LRFASFTCTPP Trigger: CGGAGGCGTGCACGTGAAGCTGGCGAACCTGAGCAAGCACCCCAAGTTTGAGGAGATTCTCACTCGCCTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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| CDS GCA 72 bp | AGACGAAGGCGAGTGAGAATCTCCTCAAACTTGGGGTaGTTGCTCAGGTTCGCCAGCTTCACGTGCACGCCT | + |
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Preference number: 6 (lower is better) Translates to: RRRRVRISSNLG*LLRFASFTCTP Trigger: AGGCGTGCACGTGAAGCTGGCGAACCTGAGCAAGCACCCCAAGTTTGAGGAGATTCTCACTCGCCTTCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003643.3 ENSMUST00000208710.2 |
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