Pregenerated sensors for CKB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001270Ensembl transcript IDs: ENSMUST00000001304.9
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGCCTGTGCCTCGCTTCTaGAGCCGCAGCCGCTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: KGSAARRQTSRMHGGHCPPVPRF*SRSRLS Trigger: GCTCAAGCGGCTGCGGCTTCAGAAGCGAGGCACAGG...CGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR GCA 90 bp | GCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCGGATGCTGCGGCCTGTaGGCACTCGCGAGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AKGSAARRQTSRMHGGHCGCCGL*ALASSA Trigger: TGCTGAGCTCGCGAGTGCGCACAGGCCGCAGCATCC...GCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CCA 90 bp | CCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTAATAAGTCTGCCAGCTTCTCGATaGCGCGGCGCTCCCCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: PPGGKHQGCMAGTARLISLPASR*RGAPRG Trigger: GCCGCGGGGAGCGCCGCGCCATCGAGAAGCTGGCAG...ACTTATTAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR GCA 90 bp | CTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCTGGGGCAGCTTGATGTaGACACCTGCCCGCAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: LRAQPPGGKHQGCMAGTAWGSLM*TPARSP Trigger: CGGACTGCGGGCAGGTGTGCACATCAAGCTGCCCCA...GGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR TCA 90 bp | GCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTAAGGTCATCGATTGCCTaGCCCTGCTCCAGCCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: AQPPGGKHQGCMAGTARLRSSIA*PCSSRC Trigger: GCAACGGCTGGAGCAGGGTCAGGCAATCGATGACCT...TAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR GCA 90 bp | GCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTATGTCCACGCCACCTGTaGCTCGCTTCTGAAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: AQPPGGKHQGCMAGTARLCPRHL*LASEAA Trigger: TGCGGCTTCAGAAGCGAGGCACAGGTGGCGTGGACA...TAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CCA 90 bp | CAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTAATACGCTCGGCGTGCACTTaGCACGGAGCTCGGCGTACA | + |
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Preference number: 4 (lower is better) Translates to: QPPGGKHQGCMAGTARLIRSACT*HGARRT Trigger: TGTACGCCGAGCTCCGTGCCAAGTGCACGCCGAGCG...TATTAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR GCA 90 bp | CTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCTCGTCGCCCGCCACTaGACCCACAGTCATGATGTA | + |
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Preference number: 4 (lower is better) Translates to: LRAQPPGGKHQGCMAGTALVARH*THSHDV Trigger: TACATCATGACTGTGGGTGCAGTGGCGGGCGACGAG...GGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR GCA 90 bp | GAGGCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACAGGTCATCGCCACCCTaGAGGTTGTCTGGGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: EAKGSAARRQTSRMHGGHRSSPP*RLSGLR Trigger: CCTCAACCCAGACAACCTGCAGGGTGGCGATGACCT...GTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR GCA 90 bp | GAGGCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGGTCGTCAATGAGCTaGTGCTGCTCCGCCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: EAKGSAARRQTSRMHGGHWSSMS*CCSASV Trigger: GACTGAGGCGGAGCAGCAGCAGCTCATTGACGACCA...GTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR GCA 90 bp | AGGCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTCCGTCCACCACCATCTaGACCAGTTCCACCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: RLRAQPPGGKHQGCMAGTPSTTI*TSSTSE Trigger: CTCGGAGGTGGAACTGGTGCAGATGGTGGTGGACGG...AGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR GCA 90 bp | GCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCATGAGGTCATCGATTaGCTGACCCTGCTCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: AKGSAARRQTSRMHGGHCHEVID*LTLLQP Trigger: CGGCTGGAGCAGGGTCAGGCAATCGATGACCTCATG...GCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CCA 90 bp | GCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTACCGGGGTCAGCACCTTaGCCATATGGTTGTTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AQPPGGKHQGCMAGTARLPGSAP*PYGCCG Trigger: GCCACAACAACCATATGGCCAAGGTGCTGACCCCGG...TAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR GCA 90 bp | AAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGGGAAGCGCAGCTTCTaGGTATTATGGCTGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KGSAARRQTSRMHGGHCPGKRSF*VLWLLE Trigger: CTCCAACAGCCATAATACGCAGAAGCTGCGCTTCCC...CGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR GCA 90 bp | GCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTATCGTCAATGAGCTGCTaGTGCTCCGCCTCAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: AQPPGGKHQGCMAGTARLSSMSC*CSASVM Trigger: CATGACTGAGGCGGAGCAGCAGCAGCTCATTGACGA...TAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CCA 90 bp | GCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCGGTCGCCATCTAGGCTaGACAGAGCTTCTACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: AKGSAARRQTSRMHGGHCGRHLG*TELLLP Trigger: TGGCAGTAGAAGCTCTGTCCAGCCTAGATGGCGACC...GCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR TCA 90 bp | CAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTAATACCTCAGTCATGCTCTTaGGCGCGTAGTACCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QPPGGKHQGCMAGTARLIPQSCS*ARSTCQ Trigger: CTGGCAGGTACTACGCGCTCAAGAGCATGACTGAGG...TATTAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR TCA 90 bp | CAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTAATAGAGTTTCGATCTGAGTaGGGCCGGTGCAGAATCGGG | + |
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Preference number: 4 (lower is better) Translates to: QPPGGKHQGCMAGTARLIEFRSE*GRCRIG Trigger: CCCGATTCTGCACCGGCCTCACTCAGATCGAAACTC...TATTAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR TCA 90 bp | CAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTAATAACTTCTGGGCCGGCATaGGGTCATCGATTGCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: QPPGGKHQGCMAGTARLITSGPA*GHRLPD Trigger: GTCAGGCAATCGATGACCTCATGCCGGCCCAGAAGT...TATTAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR GCA 90 bp | GCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCCTGCTCCAGCCGTTaGTCCATCTCAATGAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AKGSAARRQTSRMHGGHCPCSSR*SISMSS Trigger: ACTACTCATTGAGATGGAGCAACGGCTGGAGCAGGG...GCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CCA 90 bp | AGGCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTACCCTGCAGGTTGTCTaGGTTGAGGTCGGTCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: RLRAQPPGGKHQGCMAGTTLQVV*VEVGLV Trigger: CACAAGACCGACCTCAACCCAGACAACCTGCAGGGT...AGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR TCA 90 bp | AGGCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTCGGTGCAGAATCGGGTaGACACTTCCTTCATGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RLRAQPPGGKHQGCMAGTRCRIG*TLPSCC Trigger: GCAACATGAAGGAAGTGTTCACCCGATTCTGCACCG...AGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR TCA 90 bp | GAGGCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACAAGAGAGTTTCGATCTaGGTGAGGCCGGTGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: EAKGSAARRQTSRMHGGHKRVSI*VRPVQN Trigger: ATTCTGCACCGGCCTCACTCAGATCGAAACTCTCTT...GTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR GCA 90 bp | AGGCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTTGTCATTGTGCCATATaGCACGAGCATCCGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RLRAQPPGGKHQGCMAGTCHCAI*HEHPAS Trigger: ACTGGCCGGATGCTCGTGGCATATGGCACAATGACA...AGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CCA 90 bp | GCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTAGCCATATGGTTGTTGTaGCTGCTCAGATCAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: AQPPGGKHQGCMAGTARLAIWLL*LLRSGN Trigger: GTTCCCTGATCTGAGCAGCCACAACAACCATATGGC...TAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CCA 90 bp | CCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTAATAAGTCCAGGCGGTCAGCGTTaGAGACATCAAACACCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PPGGKHQGCMAGTARLISPGGQR*RHQTPH Trigger: GTGGGGTGTTTGATGTCTCCAACGCTGACCGCCTGG...ACTTATTAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR TCA 90 bp | CTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCGGTGAGGATTCCACATaGACTCATAGTTCTTGGACT | + |
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Preference number: 4 (lower is better) Translates to: LRAQPPGGKHQGCMAGTAGEDST*THSSWT Trigger: AGTCCAAGAACTATGAGTTCATGTGGAATCCTCACC...GGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR TCA 90 bp | CCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTAATAAGTGTTGCTCCATCTCAATaGGTAGTTTCACTCCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PPGGKHQGCMAGTARLISVAPSQ*VVSLRP Trigger: TGGACGGAGTGAAACTACTCATTGAGATGGAGCAAC...ACTTATTAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CAA 90 bp | CTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCCGCTCGGCGTGCACTaGGCACGGAGCTCGGCGTAC | + |
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Preference number: 5 (lower is better) Translates to: LRAQPPGGKHQGCMAGTAPLGVH*ARSSAY Trigger: GTACGCCGAGCTCCGTGCCAAGTGCACGCCGAGCGG...GGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CAA 90 bp | GCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCTCGCCACCCTGCAGGTaGTCTGGGTTGAGGTCGGTC | + |
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Preference number: 5 (lower is better) Translates to: AKGSAARRQTSRMHGGHCSPPCR*SGLRSV Trigger: GACCGACCTCAACCCAGACAACCTGCAGGGTGGCGA...GCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CAA 90 bp | CTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCCCAGGCGGTCAGCGTaGGAGACATCAAACACCCCA | + |
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Preference number: 5 (lower is better) Translates to: LRAQPPGGKHQGCMAGTAPRRSA*ETSNTP Trigger: TGGGGTGTTTGATGTCTCCAACGCTGACCGCCTGGG...GGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CAA 90 bp | GCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTATCCGGGGTCAGCACCTaGGCCATATGGTTGTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: AQPPGGKHQGCMAGTARLSGVST*AIWLLW Trigger: CCACAACAACCATATGGCCAAGGTGCTGACCCCGGA...TAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CAA 90 bp | CCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTAATAAGTGGGTTGAGGTCGGTCTaGTGCTCATCACTGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PPGGKHQGCMAGTARLISGLRSV*CSSLGW Trigger: CCAGCCCAGTGATGAGCACAAGACCGACCTCAACCC...ACTTATTAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CAA 90 bp | CCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGGTTAATAAGTAGTCCGGTGCCCAGGTaGGATGGGCATGTGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: PPGGKHQGCMAGTARLISSPVPR*DGHVRM Trigger: CATCCTCACATGCCCATCCAACCTGGGCACCGGACT...ACTTATTAACCGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS CCA 90 bp | TGCACTTGGCACGGAGCTCGGCGTACAGCTCCGGGGTCAGCACCTTaGCCATATGGTTGTTGTGGCTGCTCAGATCAGGGAACTCATCCT | + |
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Preference number: 5 (lower is better) Translates to: CTWHGARRTAPGSAP*PYGCCGCSDQGTHP Trigger: AGGATGAGTTCCCTGATCTGAGCAGCCACAACAACCATATGGCCAAGGTGCTGACCCCGGAGCTGTACGCCGAGCTCCGTGCCAAGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CAA 90 bp | AAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTGCCCGAAAGTCTTATTGTCATaGTGCCATATGCCACGAGCA | + |
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Preference number: 5 (lower is better) Translates to: KGSAARRQTSRMHGGHCPKVLLS*CHMPRA Trigger: TGCTCGTGGCATATGGCACAATGACAATAAGACTTT...CGGGCAGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS-3UTR CAA 90 bp | AGGCTAAGGGCTCAGCCGCCAGGCGGCAAACATCAAGGATGCATGGCGGGCACTACCAGGAAAGTCTTATaGTCATTGTGCCATATGCCA | + |
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Preference number: 5 (lower is better) Translates to: RLRAQPPGGKHQGCMAGTTRKVL*SLCHMP Trigger: TGGCATATGGCACAATGACAATAAGACTTTCCTGGT...AGTGCCCGCCATGCATCCTTGATGTTTGCCGCCTGGCGGCTGAGCCCTTAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS CAA 72 bp | ATGGCGTCGTCCAAAGTAAAGCCGCTCGGCGTGCACTaGGCACGGAGCTCGGCGTACAGCTCCGGGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: MASSKVKPLGVH*ARSSAYSSGVS Trigger: GCTGACCCCGGAGCTGTACGCCGAGCTCCGTGCCAAGTGCACGCCGAGCGGCTTTACTTTGGACGACGCCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS CCA 72 bp | CCAGTTCCACCTCCGAGAAGCCCAGGCGGTCAGCGTTaGAGACATCAAACACCCCACCGACAGCAGCGGTGT | + |
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Preference number: 6 (lower is better) Translates to: PVPPPRSPGGQR*RHQTPHRQQRC Trigger: ACACCGCTGCTGTCGGTGGGGTGTTTGATGTCTCCAACGCTGACCGCCTGGGCTTCTCGGAGGTGGAACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS CAA 72 bp | GCACGGAGCTCGGCGTACAGCTCCGGGGTCAGCACCTaGGCCATATGGTTGTTGTGGCTGCTCAGATCAGGG | + |
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Preference number: 6 (lower is better) Translates to: ARSSAYSSGVST*AIWLLWLLRSG Trigger: CCCTGATCTGAGCAGCCACAACAACCATATGGCCAAGGTGCTGACCCCGGAGCTGTACGCCGAGCTCCGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS CAA 72 bp | ACCAGTTCCACCTCCGAGAAGCCCAGGCGGTCAGCGTaGGAGACATCAAACACCCCACCGACAGCAGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: TSSTSEKPRRSA*ETSNTPPTAAV Trigger: CACCGCTGCTGTCGGTGGGGTGTTTGATGTCTCCAACGCTGACCGCCTGGGCTTCTCGGAGGTGGAACTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS CCA 72 bp | CACGGAGCTCGGCGTACAGCTCCGGGGTCAGCACCTTaGCCATATGGTTGTTGTGGCTGCTCAGATCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: HGARRTAPGSAP*PYGCCGCSDQG Trigger: TCCCTGATCTGAGCAGCCACAACAACCATATGGCCAAGGTGCTGACCCCGGAGCTGTACGCCGAGCTCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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| CDS CAA 90 bp | GTGCACTTGGCACGGAGCTCGGCGTACAGCTCCGGGGTCAGCACCTaGGCCATATGGTTGTTGTGGCTGCTCAGATCAGGGAACTCATCC | + |
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Preference number: 6 (lower is better) Translates to: VHLARSSAYSSGVST*AIWLLWLLRSGNSS Trigger: GGATGAGTTCCCTGATCTGAGCAGCCACAACAACCATATGGCCAAGGTGCTGACCCCGGAGCTGTACGCCGAGCTCCGTGCCAAGTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001304.9 |
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