Pregenerated sensors for CKAP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046841Ensembl transcript IDs: ENSMUST00000053871.5, ENSMUST00000167671.2
Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGTCATCTTTCTAACAGGAGACACATCCTTTTCTGCACAGGGCTaGCTGGGCCTTCAGGAAGCCAAACCAAAAGCAGAAACAGGACTT | + |
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Preference number: 1 (lower is better) Translates to: TVIFLTGDTSFSAQG*LGLQEAKPKAETGL Trigger: AAGTCCTGTTTCTGCTTTTGGTTTGGCTTCCTGAAGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| 3UTR-3UTR GCA 90 bp | GACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCAGACACATCCTTTTCTaGACAGGGCTGGCTGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: DSQAGWGWMWGPLSPIQSRHILF*TGLAGP Trigger: AGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCT...GCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTATCTGCTACTTTCCATaGGGTGGGGGAGGGGCGAGA | + |
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Preference number: 2 (lower is better) Translates to: TLRQVGGGCGVLFRPFRAICYFP*GGGGAR Trigger: TCTCGCCCCTCCCCCACCCCATGGAAAGTAGCAGAT...AGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTAGACACATCCTTTTCTaGACAGGGCTGGCTGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: TLRQVGGGCGVLFRPFRARHILF*TGLAGP Trigger: AGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCT...AGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCCAGGCAGGTTGGGGGTaGATGTGGGGTCCTCTTTCG | + |
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Preference number: 2 (lower is better) Translates to: AQILCGKYSSHIRTQRTPQAGWG*MWGPLS Trigger: CGAAAGAGGACCCCACATCCACCCCCAACCTGCCTG...GGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| 3UTR-3UTR CCA 90 bp | CGCTGTGATAAAACAAAAAGACCTGGCCCACATCTCTCGGGAAGATGCCCAAATGGTTGGGGGTGGATGTaGGGTCCTCTTTCGCCCATT | + |
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Preference number: 2 (lower is better) Translates to: RCDKTKRPGPHLSGRCPNGWGWM*GPLSPI Trigger: AATGGGCGAAAGAGGACCCCACATCCACCCCCAACC...ATTTGGGCATCTTCCCGAGAGATGTGGGCCAGGTCTTTTTGTTTTATCACAGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053871.5 |
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| 3UTR-3UTR CCA 90 bp | GGAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGATCTGCTACTTTCCATaGGGTGGGGGAGGGGCGAGA | + |
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Preference number: 2 (lower is better) Translates to: GRCPNPLWKIQLSHQNPKICYFP*GGGGAR Trigger: TCTCGCCCCTCCCCCACCCCATGGAAAGTAGCAGAT...CTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGACTGCACAGGGCTGGCTaGGCCTTCAGGAAGCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: EDAQILCGKYSSHIRTQRLHRAG*AFRKPN Trigger: GTTTGGCTTCCTGAAGGCCCAGCCAGCCCTGTGCAG...TCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAGACTCTCAGGCAGGTTaGGGGTGGATGTGGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: EDAQILCGKYSSHIRTQRDSQAG*GWMWGP Trigger: AGGACCCCACATCCACCCCCAACCTGCCTGAGAGTC...TCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACTTTTCTGCACAGGGCTaGCTGGGCCTTCAGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: MPKSSVENTALTSEPKEHFSAQG*LGLQEA Trigger: GGCTTCCTGAAGGCCCAGCCAGCCCTGTGCAGAAAA...GTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| 3UTR TCA 72 bp | GAACAATTACAGAAACGCAGCCCACGTGATCCTCACTaGCAGATGGGGGCCGGGCGAGGCGAAGGGAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: EQLQKRSPRDPH*QMGAGRGEGRP Trigger: AGGCCTCCCTTCGCCTCGCCCGGCCCCCATCTGTCAGTGAGGATCACGTGGGCTGCGTTTCTGTAATTGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053871.5 |
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| 3UTR-3UTR CAA 90 bp | ATGGTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCTTTGTTTGTTTGGTTTaGGTCGTAAGAAACTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: MVTPPSLMTQVGHQDQKCFVCLV*VVRNCA Trigger: GGCACAGTTTCTTACGACCAAAACCAAACAAACAAA...GCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| 3UTR TCA 72 bp | GGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTaGCCTCTAGGAGTTTTTACCAGTTCTAAATGGAAG | + |
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Preference number: 3 (lower is better) Translates to: GWMWGPLSPIQS*PLGVFTSSKWK Trigger: CTTCCATTTAGAACTGGTAAAAACTCCTAGAGGTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| 3UTR CCA 72 bp | TTTCTAACAGGAGACACATCCTTTTCTGCACAGGGCTaGCTGGGCCTTCAGGAAGCCAAACCAAAAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: FLTGDTSFSAQG*LGLQEAKPKAE Trigger: TTCTGCTTTTGGTTTGGCTTCCTGAAGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCTCCTGTTAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCTTTGTTTGTTTGGTTTaGGTCGTAAGAAACTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: AQILCGKYSSHIRTQRTPFVCLV*VVRNCA Trigger: GGCACAGTTTCTTACGACCAAAACCAAACAAACAAA...GGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | GACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCGCACCCGGCCAAGCCTaGGCGAGCAGGACGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: DSQAGWGWMWGPLSPIQSAPGQA*ASRTRR Trigger: CCTCCGCGTCCTGCTCGCGCAGGCTTGGCCGGGTGC...GCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | ATGGTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCCGCCGTGGCCGCCCTTaGAGCCCCTTTGTTTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: MVTPPSLMTQVGHQDQKCRRGRP*SPFVWP Trigger: CGGCCAAACAAAGGGGCTCCAAGGGCGGCCACGGCG...GCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCACCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | GTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTCGGGAGAAGTCCTGGTaGCCACGCCGGACCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VTPPSLMTQVGHQDQKCTREKSW*PRRTCW Trigger: CCAGCAGGTCCGGCGTGGCCACCAGGACTTCTCCCG...AGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACCCCAGCTCATCCCTCTaGCGGGAGAAGTCCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LRQVGGGCGVLFRPFRADPSSSL*REKSWW Trigger: CCACCAGGACTTCTCCCGTCAGAGGGATGAGCTGGG...GTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | GACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCAGTCGGCCGCCTGCTTaGACGCCTGTTGCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: DSQAGWGWMWGPLSPIQSSRPPA*TPVAPA Trigger: AGCAGGAGCAACAGGCGTTCAAGCAGGCGGCCGACT...GCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | ACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACGGCACCTTCCTCTaGCCCATGGGCCCCGACCTT | + |
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Preference number: 4 (lower is better) Translates to: TLRQVGGGCGVLFRPFRADGTFL*PMGPDL Trigger: AAGGTCGGGGCCCATGGGTCAGAGGAAGGTGCCGTC...AGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACGCTGGCCAGGTCAGATaGGGAGCCCAGGTTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LRQVGGGCGVLFRPFRADAGQVR*GAQVSH Trigger: GTGGGAAACCTGGGCTCCTCATCTGACCTGGCCAGC...GTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | ACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTCTGTCCAGGAAGTCCTaGGGAGGCAAGCCCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: TLRQVGGGCGVLFRPFRALSRKS*GGKPSA Trigger: GGCCGAGGGCTTGCCTCCTCAGGACTTCCTGGACAG...AGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | ATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTGGGCCTTCAGGACCTACTCGGGAGAAGTCCTGGTaGCCACGCCGGACCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: MTQVGHQDQKCTGPSGPTREKSW*PRRTCW Trigger: CCAGCAGGTCCGGCGTGGCCACCAGGACTTCTCCCG...AGTAGGTCCTGAAGGCCCAGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | GACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCCCGTCCTCTACATACTaGAGCCTGGCACCCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: DSQAGWGWMWGPLSPIQSPSSTY*SLAPRP Trigger: GGGCCTGGGTGCCAGGCTCCAGTATGTAGAGGACGG...GCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | ATGGTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCGCTGGCCAGGTCAGATaGGGAGCCCAGGTTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: MVTPPSLMTQVGHQDQKCAGQVR*GAQVSH Trigger: GTGGGAAACCTGGGCTCCTCATCTGACCTGGCCAGC...GCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCACCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | GTCATCTTTCTAACAGGAGACACATCCTTTTCTGCACAGGGCTGGCTGGGCCTTCGGTGCGCCTGGTTCTaGGGGTGCTGCGGCGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VIFLTGDTSFSAQGWLGLRCAWF*GCCGGC Trigger: GCACCCGCCGCAGCACCCGCAGAACCAGGCGCACCG...AAGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | GTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTTTCTGCTCGACGCCCTaGAAGCCCTGGCCCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: VTPPSLMTQVGHQDQKCTFCSTP*KPWPSS Trigger: TGAGCTGGGCCAGGGCTTGCAGGGCGTCGAGCAGAA...AGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | ATGGTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCTTCTGCTCGACGCCCTaGAAGCCCTGGCCCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: MVTPPSLMTQVGHQDQKCFCSTP*KPWPSS Trigger: TGAGCTGGGCCAGGGCTTGCAGGGCGTCGAGCAGAA...GCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCACCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | TCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACCCGTACTCCTGGCTCTTaGACAGGAGCGACTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SGRLGVDVGSSFAHSELTRTPGS*TGATPG Trigger: GCCTGGAGTCGCTCCTGTCCAAGAGCCAGGAGTACG...GGTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | CTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACCGTACTCCTGGCTCTTaGACAGGAGCGACTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LRQVGGGCGVLFRPFRADRTPGS*TGATPG Trigger: GCCTGGAGTCGCTCCTGTCCAAGAGCCAGGAGTACG...GTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | ATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTGGGCCTTCAGGACCTACTCCCTCGGCCTGGGCTTaGTCCTGGCTGAGCAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: MTQVGHQDQKCTGPSGPTPSAWA*SWLSSE Trigger: CTCACTGCTCAGCCAGGACCAAGCCCAGGCCGAGGG...AGTAGGTCCTGAAGGCCCAGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | GACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCGGTAGAAGAGAAAGTTaGGCACCCGGCCAAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: DSQAGWGWMWGPLSPIQSGRRES*APGQAC Trigger: GCAGGCTTGGCCGGGTGCTCAACTTTCTCTTCTACC...GCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | GTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTGGGCTTGGTCCTGGCTaGGCAGTGAGAGCACTTGCT | + |
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Preference number: 4 (lower is better) Translates to: VTPPSLMTQVGHQDQKCTGLGPG*AVRALA Trigger: AGCAAGTGCTCTCACTGCTCAGCCAGGACCAAGCCC...AGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | ATGGTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCGACATCATGGAGGCCTaGACCTCCTTCACGGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: MVTPPSLMTQVGHQDQKCDIMEA*TSFTAS Trigger: GGACGCCGTGAAGGAGGTCCAGGCCTCCATGATGTC...GCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | ACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTTCCAGGCTTTCGGTGTaGCGTGCAGAAGCCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: TLRQVGGGCGVLFRPFRASRLSV*RAEATC Trigger: GCAGGTGGCTTCTGCACGCCACACCGAAAGCCTGGA...AGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | ATGGTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCGCCTGGGCTTGGTCCTaGCTGAGCAGTGAGAGCACT | + |
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Preference number: 4 (lower is better) Translates to: MVTPPSLMTQVGHQDQKCAWAWS*LSSEST Trigger: AGTGCTCTCACTGCTCAGCCAGGACCAAGCCCAGGC...GCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | GTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTGGTAGAAGAGAAAGTTaGGCACCCGGCCAAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: VTPPSLMTQVGHQDQKCTGRRES*APGQAC Trigger: GCAGGCTTGGCCGGGTGCTCAACTTTCTCTTCTACC...AGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | ATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTGGGCCTTCAGGACCTACTACCTCCTCCAGGACGTaGTGGACATACCAGCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: MTQVGHQDQKCTGPSGPTTSSRT*WTYQPE Trigger: CTCGGGCTGGTATGTCCATCACGTCCTGGAGGAGGT...AGTAGGTCCTGAAGGCCCAGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | ATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTGGGCCTTCAGGACCTACTCCTGTTGCTCCTGCTTaGGGCTCACCAGTTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: MTQVGHQDQKCTGPSGPTPVAPA*GSPVPA Trigger: TGCGGGAACTGGTGAGCCTCAAGCAGGAGCAACAGG...AGTAGGTCCTGAAGGCCCAGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | ATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCACGGTGCGCCTGGTTCTaGGGGTGCTGCGGCGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: ILCGKYSSHIRTQRTPPPRCAWF*GCCGGC Trigger: GCACCCGCCGCAGCACCCGCAGAACCAGGCGCACCG...TGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | GTCATCTTTCTAACAGGAGACACATCCTTTTCTGCACAGGGCTGGCTGGGCCTTTGGCCACGCCGGACCTaGTGGACCTCCTCCAGGACG | + |
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Preference number: 4 (lower is better) Translates to: VIFLTGDTSFSAQGWLGLWPRRT*WTSSRT Trigger: CGTCCTGGAGGAGGTCCAGCAGGTCCGGCGTGGCCA...AAGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | TCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACCAACGCCTGTTGCTCCTaGTTGAGGCTCACCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SGRLGVDVGSSFAHSELTNACCS*LRLTSS Trigger: GGAACTGGTGAGCCTCAAGCAGGAGCAACAGGCGTT...GGTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | ATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTGGGCCTTCAGGACCTACTTCTGAGTCGGCCGCCTaGTTGAACGCCTGTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: MTQVGHQDQKCTGPSGPTSESAA*LNACCS Trigger: GGAGCAACAGGCGTTCAAGCAGGCGGCCGACTCAGA...AGTAGGTCCTGAAGGCCCAGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | CTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACCCCAGGCCCTCAATCTaGCTCTGCAGTTCCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRQVGGGCGVLFRPFRADPRPSI*LCSSSK Trigger: CTTAGAGGAACTGCAGAGGCAGATTGAGGGCCTGGG...GTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACCTACATACTGGAGCCTaGCACCCAGGCCCTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LRQVGGGCGVLFRPFRADLHTGA*HPGPQS Trigger: AGATTGAGGGCCTGGGTGCCAGGCTCCAGTATGTAG...GTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACCCTACATACTGGAGCCTaGCACCCAGGCCCTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SGRLGVDVGSSFAHSELTLHTGA*HPGPQS Trigger: AGATTGAGGGCCTGGGTGCCAGGCTCCAGTATGTAG...GGTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | TCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACCAGGCTTTGGAGTCTTTaGAGACGGCACCTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGRLGVDVGSSFAHSELTRLWSL*RRHLPL Trigger: CAGAGGAAGGTGCCGTCTTCAAAGACTCCAAAGCCT...GGTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | GTCATCTTTCTAACAGGAGACACATCCTTTTCTGCACAGGGCTGGCTGGGCCTTCTGTCCAGGAAGTCCTaGGGAGGCAAGCCCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VIFLTGDTSFSAQGWLGLLSRKS*GGKPSA Trigger: GGCCGAGGGCTTGCCTCCTCAGGACTTCCTGGACAG...AAGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | GGAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGTGGTTCTGCGGGTGCTaGGGCGGGTGCGGCGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRCPNPLWKIQLSHQNPKWFCGC*GGCGAG Trigger: TCCCGCGCCGCACCCGCCGCAGCACCCGCAGAACCA...CTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | GTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTTGCTTGAACGCCTGTTaGTCCTGCTTGAGGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VTPPSLMTQVGHQDQKCTCLNAC*SCLRLT Trigger: GGTGAGCCTCAAGCAGGAGCAACAGGCGTTCAAGCA...AGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCTGCTTGAACGCCTGTTaGTCCTGCTTGAGGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: MVTPPSLMTQVGHQDQKCCLNAC*SCLRLT Trigger: GGTGAGCCTCAAGCAGGAGCAACAGGCGTTCAAGCA...GCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | GTCATCTTTCTAACAGGAGACACATCCTTTTCTGCACAGGGCTGGCTGGGCCTTCACTTGCTCCTGCAGTaGCTCCACGGTACCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VIFLTGDTSFSAQGWLGLHLLLQ*LHGTGQ Trigger: CTGCCCGGTACCGTGGAGTCACTGCAGGAGCAAGTG...AAGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCAAACGCACATGGTGACCGGGCTTGGTCCTGGCTaGGCAGTGAGAGCACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TALTSEPKEHPLQTHMVTGLGPG*AVRALA Trigger: AGCAAGTGCTCTCACTGCTCAGCCAGGACCAAGCCC...GGTCACCATGTGCGTTTGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | GAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGATGGTTCTGCGGGTGCTaGGGCGGGTGCGGCGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EDAQILCGKYSSHIRTQRWFCGC*GGCGAG Trigger: TCCCGCGCCGCACCCGCCGCAGCACCCGCAGAACCA...TCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | ATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTGGGCCTTCAGGACCTACTAACGCCTGTTGCTCCTaGTTGAGGCTCACCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MTQVGHQDQKCTGPSGPTNACCS*LRLTSS Trigger: GGAACTGGTGAGCCTCAAGCAGGAGCAACAGGCGTT...AGTAGGTCCTGAAGGCCCAGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | GTCATCTTTCTAACAGGAGACACATCCTTTTCTGCACAGGGCTGGCTGGGCCTTTTCTCCGTGAGGGCCTaGAGAGCCAGGCGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VIFLTGDTSFSAQGWLGLFSVRA*RARRSE Trigger: CTCAGAGCGCCTGGCTCTGCAGGCCCTCACGGAGAA...AAGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | ACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCAAACGCACATGGTGACCCCCAGGTTTCCCACGTaGTCCTGCAGCATAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TALTSEPKEHPLQTHMVTPRFPT*SCSIAR Trigger: CCTGGCTATGCTGCAGGAGCACGTGGGAAACCTGGG...GGTCACCATGTGCGTTTGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | ATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCACGCCGTGGCCGCCCTTaGAGCCCCTTTGTTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILCGKYSSHIRTQRTPPPRRGRP*SPFVWP Trigger: CGGCCAAACAAAGGGGCTCCAAGGGCGGCCACGGCG...TGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CCA 90 bp | GACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTTCTGGCTCCTCTTCTaGACATCAGTGAAGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DSQAGWGWMWGPLSPIQSFWLLF*TSVKMA Trigger: CGCCATCTTCACTGATGTCCAGAAGAGGAGCCAGAA...GCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | TCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACCTTCTGGCTCCTCTTCTaGACATCAGTGAAGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGRLGVDVGSSFAHSELTFWLLF*TSVKMA Trigger: CGCCATCTTCACTGATGTCCAGAAGAGGAGCCAGAA...GGTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCAAACGCACATGGTGACCGCCTGGGCTTGGTCCTaGCTGAGCAGTGAGAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TALTSEPKEHPLQTHMVTAWAWS*LSSEST Trigger: AGTGCTCTCACTGCTCAGCCAGGACCAAGCCCAGGC...GGTCACCATGTGCGTTTGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | GTCATCTTTCTAACAGGAGACACATCCTTTTCTGCACAGGGCTGGCTGGGCCTTCCTGTTGCTCCTGCTTaGGGCTCACCAGTTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VIFLTGDTSFSAQGWLGLPVAPA*GSPVPA Trigger: TGCGGGAACTGGTGAGCCTCAAGCAGGAGCAACAGG...AAGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | GTCATCTTTCTAACAGGAGACACATCCTTTTCTGCACAGGGCTGGCTGGGCCTTGACATCATGGAGGCCTaGACCTCCTTCACGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VIFLTGDTSFSAQGWLGLDIMEA*TSFTAS Trigger: GGACGCCGTGAAGGAGGTCCAGGCCTCCATGATGTC...AAGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | GGAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGCTGGACAGCGCCAGCTaGGTCTCCCCCAGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRCPNPLWKIQLSHQNPKLDSAS*VSPRLL Trigger: CAGGAGCCTGGGGGAGACCCAGCTGGCGCTGTCCAG...CTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | GCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCCCCTCGGCCTGGGCTTaGTCCTGGCTGAGCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQILCGKYSSHIRTQRTPPSAWA*SWLSSE Trigger: CTCACTGCTCAGCCAGGACCAAGCCCAGGCCGAGGG...GGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | GGAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGGGCAAGCCCTCGGCCTaGGCTTGGTCCTGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRCPNPLWKIQLSHQNPKGKPSA*AWSWLS Trigger: GCTCAGCCAGGACCAAGCCCAGGCCGAGGGCTTGCC...CTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | GACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCAAGTCTGACTCCACTTaGCTCACTGAGGATTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSQAGWGWMWGPLSPIQSKSDST*LTEDFR Trigger: CCTGAAATCCTCAGTGAGCCAAGTGGAGTCAGACTT...GCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | CGCTGTGATAAAACAAAAAGACCTGGCCCACATCTCTCGGGAAGATGCCCAAATTGTTCTCCAGGGACGTaGAGTCCCGCTCCCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RCDKTKRPGPHLSGRCPNCSPGT*SPAPGH Trigger: ATGCCCGGGAGCGGGACTTCACGTCCCTGGAGAACA...ATTTGGGCATCTTCCCGAGAGATGTGGGCCAGGTCTTTTTGTTTTATCACAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053871.5 |
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| CDS-3UTR TCA 90 bp | GCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCTGTTCTCCAGGGACGTaGAGTCCCGCTCCCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQILCGKYSSHIRTQRTPCSPGT*SPAPGH Trigger: ATGCCCGGGAGCGGGACTTCACGTCCCTGGAGAACA...GGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | ATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCACACTTGCTCCTGCAGTaGCTCCACGGTACCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILCGKYSSHIRTQRTPPPHLLLQ*LHGTGQ Trigger: CTGCCCGGTACCGTGGAGTCACTGCAGGAGCAAGTG...TGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | GCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCTTCTCCGTGAGGGCCTaGAGAGCCAGGCGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQILCGKYSSHIRTQRTPFSVRA*RARRSE Trigger: CTCAGAGCGCCTGGCTCTGCAGGCCCTCACGGAGAA...GGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | ATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCTGGACAGCGCCAGCTaGGTCTCCCCCAGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MPKSSVENTALTSEPKEHLDSAS*VSPRLL Trigger: CAGGAGCCTGGGGGAGACCCAGCTGGCGCTGTCCAG...GTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | GAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAGGCAAGCCCTCGGCCTaGGCTTGGTCCTGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDAQILCGKYSSHIRTQRGKPSA*AWSWLS Trigger: GCTCAGCCAGGACCAAGCCCAGGCCGAGGGCTTGCC...TCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | GAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGATCTCCCCCAGGCTCCTaGCTGTGCTGGCCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EDAQILCGKYSSHIRTQRSPPGS*LCWPGQ Trigger: CTGACCTGGCCAGCACAGTCAGGAGCCTGGGGGAGA...TCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR GCA 90 bp | GTCATCTTTCTAACAGGAGACACATCCTTTTCTGCACAGGGCTGGCTGGGCCTTAGCATAGCCAGGCGTTaGTCGTACTCCTGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VIFLTGDTSFSAQGWLGLSIARR*SYSWLL Trigger: CAAGAGCCAGGAGTACGAGCAACGCCTGGCTATGCT...AAGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CCA 90 bp | GAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGACCGTCCTCTACATACTaGAGCCTGGCACCCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EDAQILCGKYSSHIRTQRPSSTY*SLAPRP Trigger: GGGCCTGGGTGCCAGGCTCCAGTATGTAGAGGACGG...TCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR TCA 90 bp | ATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACACCTCCTCCAGGACGTaGTGGACATACCAGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: MPKSSVENTALTSEPKEHTSSRT*WTYQPE Trigger: CTCGGGCTGGTATGTCCATCACGTCCTGGAGGAGGT...GTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACGTCCTGGCTGAGCAGTaGGAGCACTTGCTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MPKSSVENTALTSEPKEHVLAEQ*EHLLLQ Trigger: CTGCAGGAGCAAGTGCTCTCACTGCTCAGCCAGGAC...GTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | AAATGGAAGACAAGAATGAGACAGCTTCTAAAAACCCTGGCCAGGAGTATAAAATGGCCACGCCGGACCTaGTGGACCTCCTCCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: KWKTRMRQLLKTLARSIKWPRRT*WTSSRT Trigger: CGTCCTGGAGGAGGTCCAGCAGGTCCGGCGTGGCCA...TTTTATACTCCTGGCCAGGGTTTTTAGAAGCTGTCTCATTCTTGTCTTCCATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACAGGGATTGGACCTTCTaGTCGACGCCCTGCAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MPKSSVENTALTSEPKEHRDWTF*STPCKP Trigger: GGGCTTGCAGGGCGTCGAGCAGAAGGTCCAATCCCT...GTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCAGTTAAAGCCACTGTCATCTTTCTAACAGGAGACACATCCTTTTCTGCATCTGAGTCGGCCGCCTaGTTGAACGCCTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPVKATVIFLTGDTSFSASESAA*LNACCS Trigger: GGAGCAACAGGCGTTCAAGCAGGCGGCCGACTCAGA...TGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGACAGTGGCTTTAACTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCACCCAGGCCCTCAATCTaGCTCTGCAGTTCCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILCGKYSSHIRTQRTPPPPRPSI*LCSSSK Trigger: CTTAGAGGAACTGCAGAGGCAGATTGAGGGCCTGGG...TGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCAAGCATAGCCAGGCGTTaGTCGTACTCCTGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILCGKYSSHIRTQRTPPPSIARR*SYSWLL Trigger: CAAGAGCCAGGAGTACGAGCAACGCCTGGCTATGCT...TGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCCAGGTTTCCCACGTaGTCCTGCAGCATAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MPKSSVENTALTSEPKEHPRFPT*SCSIAR Trigger: CCTGGCTATGCTGCAGGAGCACGTGGGAAACCTGGG...GTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCGCATCCTTCACCACGTaGATCCCGTCCGACAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: AQILCGKYSSHIRTQRTPASFTT*IPSDRS Trigger: AGATCTGTCGGACGGGATCCACGTGGTGAAGGATGC...GGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGGACTGCGATCCCCCTTaGATTCTTCCAGGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRCPNPLWKIQLSHQNPKDCDPP*ILPGRP Trigger: TGGCCTCCCTGGAAGAATCCAAGGGGGATCGCAGTC...CTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCAGTTAAAGCCACTGTCATCTTTCTAACAGGAGACACATCCTTTTCTGCATCCAGGCTTTCGGTGTaGCGTGCAGAAGCCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPVKATVIFLTGDTSFSASRLSV*RAEATC Trigger: GCAGGTGGCTTCTGCACGCCACACCGAAAGCCTGGA...TGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGACAGTGGCTTTAACTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAGCTCACCCAGGCTCTaGTTCAGCTCCTTCAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GRCPNPLWKIQLSHQNPKSSPRL*FSSFKS Trigger: CGACTTGAAGGAGCTGAAGCAGAGCCTGGGTGAGCT...CTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCAGTTAAAGCCACTGTCATCTTTCTAACAGGAGACACATCCTTTTCTGCAGACTGCGATCCCCCTTaGATTCTTCCAGGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPVKATVIFLTGDTSFSADCDPP*ILPGRP Trigger: TGGCCTCCCTGGAAGAATCCAAGGGGGATCGCAGTC...TGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGACAGTGGCTTTAACTGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR TCA 90 bp | GTCATCTTTCTAACAGGAGACACATCCTTTTCTGCACAGGGCTGGCTGGGCCTTTCTTCTGGACATCAGTaGAGATGGCGATGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VIFLTGDTSFSAQGWLGLSSGHQ*RWRCCH Trigger: ATGACAACATCGCCATCTTCACTGATGTCCAGAAGA...AAGGCCCAGCCAGCCCTGTGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR TCA 90 bp | AAATGGAAGACAAGAATGAGACAGCTTCTAAAAACCCTGGCCAGGAGTATAAAAAGTCGGCCGCCTGCTTaGACGCCTGTTGCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KWKTRMRQLLKTLARSIKSRPPA*TPVAPA Trigger: AGCAGGAGCAACAGGCGTTCAAGCAGGCGGCCGACT...TTTTATACTCCTGGCCAGGGTTTTTAGAAGCTGTCTCATTCTTGTCTTCCATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCATGTCCACGGCAGTCCTaGGCATTTTCAAGTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ILCGKYSSHIRTQRTPPPCPRQS*AFSSLT Trigger: AGTCAGACTTGAAAATGCTCAGGACTGCCGTGGACA...TGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACAGCTCACCCAGGCTCTaGTTCAGCTCCTTCAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: MPKSSVENTALTSEPKEHSSPRL*FSSFKS Trigger: CGACTTGAAGGAGCTGAAGCAGAGCCTGGGTGAGCT...GTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| 3UTR CAA 72 bp | GGCCTTCAGGACCTACTGAATTTGCATAGTTACCGTTaGATTGGATTAGGGAATGGAGAGAGACCACGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLQDLLNLHSYR*IGLGNGERPRL Trigger: GAGGCGTGGTCTCTCTCCATTCCCTAATCCAATCAAACGGTAACTATGCAAATTCAGTAGGTCCTGAAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGTTAAAGCCACTGTCATCTTTCTAACAGGAGACACATCCTTTTCTGCAAGGCTTTGGAGTCTTTaGAGACGGCACCTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPVKATVIFLTGDTSFSARLWSL*RRHLPL Trigger: CAGAGGAAGGTGCCGTCTTCAAAGACTCCAAAGCCT...TGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGACAGTGGCTTTAACTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR TCA 90 bp | AAATGGAAGACAAGAATGAGACAGCTTCTAAAAACCCTGGCCAGGAGTATAAAAGTCCTGGCTGAGCAGTaGGAGCACTTGCTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KWKTRMRQLLKTLARSIKVLAEQ*EHLLLQ Trigger: CTGCAGGAGCAAGTGCTCTCACTGCTCAGCCAGGAC...TTTTATACTCCTGGCCAGGGTTTTTAGAAGCTGTCTCATTCTTGTCTTCCATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGTTAAAGCCACTGTCATCTTTCTAACAGGAGACACATCCTTTTCTGCATGTCCACGGCAGTCCTaGGCATTTTCAAGTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SPVKATVIFLTGDTSFSACPRQS*AFSSLT Trigger: AGTCAGACTTGAAAATGCTCAGGACTGCCGTGGACA...TGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGACAGTGGCTTTAACTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCAAACGCACATGGTGACCTTGAGAATCTCATTCTaGAACTTCTGTAGAACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TALTSEPKEHPLQTHMVTLRISF*NFCRTS Trigger: CGAAGTTCTACAGAAGTTGCAGAATGAGATTCTCAA...GGTCACCATGTGCGTTTGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACAAGTCTGACTCCACTTaGCTCACTGAGGATTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MPKSSVENTALTSEPKEHKSDST*LTEDFR Trigger: CCTGAAATCCTCAGTGAGCCAAGTGGAGTCAGACTT...GTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| 3UTR CAA 72 bp | ACCAGAAGTGCACTGGGCCTTCAGGACCTACTGAATTaGCATAGTTACCGTTTGATTGGATTAGGGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRSALGLQDLLN*HSYRLIGLGNG Trigger: TCCATTCCCTAATCCAATCAAACGGTAACTATGCAAATTCAGTAGGTCCTGAAGGCCCAGTGCACTTCTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCGTCCGACAGATCTTTaGGAATCTCATTCTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: MPKSSVENTALTSEPKEHRPTDL*ESHSAT Trigger: AGTTGCAGAATGAGATTCTCAAAGATCTGTCGGACG...GTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGTTAAAGCCACTGTCATCTTTCTAACAGGAGACACATCCTTTTCTGCATCTTCTGGACATCAGTaGAGATGGCGATGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPVKATVIFLTGDTSFSASSGHQ*RWRCCH Trigger: ATGACAACATCGCCATCTTCACTGATGTCCAGAAGA...TGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGACAGTGGCTTTAACTGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR GCA 90 bp | AAATGGAAGACAAGAATGAGACAGCTTCTAAAAACCCTGGCCAGGAGTATAAAATTGAGAATCTCATTCTaGAACTTCTGTAGAACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KWKTRMRQLLKTLARSIKLRISF*NFCRTS Trigger: CGAAGTTCTACAGAAGTTGCAGAATGAGATTCTCAA...TTTTATACTCCTGGCCAGGGTTTTTAGAAGCTGTCTCATTCTTGTCTTCCATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS GCA 90 bp | TTCTGCGGGTGCTGCGGCGGGTGCGGCGCGGGAGGCTGCGGCTGCTaGGGCGCCGCCGGCGGCTTCTTCGCCACGTCATCCGCGCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FCGCCGGCGAGGCGC*GAAGGFFATSSAPP Trigger: GGGCGGCGCGGATGACGTGGCGAAGAAGCCGCCGGCGGCGCCGCAGCAGCCGCAGCCTCCCGCGCCGCACCCGCCGCAGCACCCGCAGAA 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CCA 90 bp | GCCGCCGGCGGCTTCTTCGCCACGTCATCCGCGCCGCCCGACGGGTaGGCGCCCTTGTCCGAGGGGCTCGCGGCGCCGTGGCCGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AAGGFFATSSAPPDG*APLSEGLAAPWPPL Trigger: CAAGGGCGGCCACGGCGCCGCGAGCCCCTCGGACAAGGGCGCCCACCCGTCGGGCGGCGCGGATGACGTGGCGAAGAAGCCGCCGGCGGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS GCA 90 bp | TGGTTCTGCGGGTGCTGCGGCGGGTGCGGCGCGGGAGGCTGCGGCTaGTGCGGCGCCGCCGGCGGCTTCTTCGCCACGTCATCCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: WFCGCCGGCGAGGCG*CGAAGGFFATSSAP Trigger: CGGCGCGGATGACGTGGCGAAGAAGCCGCCGGCGGCGCCGCAGCAGCCGCAGCCTCCCGCGCCGCACCCGCCGCAGCACCCGCAGAACCA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS TCA 90 bp | CCGAGAAGGCGGCCGCCGCCACCAGGGAGAGGTAGAAGAGAAAGTTaGGCACCCGGCCAAGCCTGCGCGAGCAGGACGCGGAGGACGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PRRRPPPPGRGRRES*APGQACASRTRRTR Trigger: ACGCGTCCTCCGCGTCCTGCTCGCGCAGGCTTGGCCGGGTGCTCAACTTTCTCTTCTACCTCTCCCTGGTGGCGGCGGCCGCCTTCTCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS TCA 90 bp | AAGTCCTGGTGGCCACGCCGGACCTGCTGGACCTCCTCCAGGACGTaGTGGACATACCAGCCCGAGAAGGCGGCCGCCGCCACCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSWWPRRTCWTSSRT*WTYQPEKAAAATRE Trigger: CTCCCTGGTGGCGGCGGCCGCCTTCTCGGGCTGGTATGTCCATCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGTGGCCACCAGGACTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS GCA 90 bp | CGAGAGGAGGACTCCTCGGACCGCAGAAGCTTCTCCGTGAGGGCCTaGAGAGCCAGGCGCTCTGAGTCGGCCGCCTGCTTGAACGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: REEDSSDRRSFSVRA*RARRSESAACLNAC Trigger: ACAGGCGTTCAAGCAGGCGGCCGACTCAGAGCGCCTGGCTCTGCAGGCCCTCACGGAGAAGCTTCTGCGGTCCGAGGAGTCCTCCTCTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CAA 90 bp | CTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACGACGCGGAGGACGCGTaGGCGGTGGCGGCTGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRQVGGGCGVLFRPFRADDAEDA*AVAAED Trigger: GTCCTCAGCCGCCACCGCCAACGCGTCCTCCGCGTC...GTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS TCA 90 bp | CAGCTGGGTCTCCCCCAGGCTCCTGACTGTGCTGGCCAGGTCAGATaGGGAGCCCAGGTTTCCCACGTGCTCCTGCAGCATAGCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QLGLPQAPDCAGQVR*GAQVSHVLLQHSQA Trigger: CGCCTGGCTATGCTGCAGGAGCACGTGGGAAACCTGGGCTCCTCATCTGACCTGGCCAGCACAGTCAGGAGCCTGGGGGAGACCCAGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS TCA 90 bp | CCTTCAAGTCGCTGGACAGCGCCAGCTGGGTCTCCCCCAGGCTCCTaGCTGTGCTGGCCAGGTCAGATGAGGAGCCCAGGTTTCCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: PSSRWTAPAGSPPGS*LCWPGQMRSPGFPR Trigger: ACGTGGGAAACCTGGGCTCCTCATCTGACCTGGCCAGCACAGTCAGGAGCCTGGGGGAGACCCAGCTGGCGCTGTCCAGCGACTTGAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS GCA 90 bp | TGCTCCTGCAGTGACTCCACGGTACCGGGCAGCTCACCCAGGCTCTaGTTCAGCTCCTTCAAGTCGCTGGACAGCGCCAGCTGGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSCSDSTVPGSSPRL*FSSFKSLDSASWVS Trigger: GGAGACCCAGCTGGCGCTGTCCAGCGACTTGAAGGAGCTGAAGCAGAGCCTGGGTGAGCTGCCCGGTACCGTGGAGTCACTGCAGGAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CCA 90 bp | CCCAGGCTCTGCTTCAGCTCCTTCAAGTCGCTGGACAGCGCCAGCTaGGTCTCCCCCAGGCTCCTGACTGTGCTGGCCAGGTCAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: PRLCFSSFKSLDSAS*VSPRLLTVLARSDE Trigger: CTCATCTGACCTGGCCAGCACAGTCAGGAGCCTGGGGGAGACCCAGCTGGCGCTGTCCAGCGACTTGAAGGAGCTGAAGCAGAGCCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CAA 90 bp | ACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGCGCCGTGGCCGCCCTaGGAGCCCCTTTGTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLRQVGGGCGVLFRPFRAAPWPP*EPLCLA Trigger: GGCCAAACAAAGGGGCTCCAAGGGCGGCCACGGCGC...AGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CAA 90 bp | CTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACGAGTCGGCCGCCTGCTaGAACGCCTGTTGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRQVGGGCGVLFRPFRADESAAC*NACCSC Trigger: GCAGGAGCAACAGGCGTTCAAGCAGGCGGCCGACTC...GTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS TCA 90 bp | GAGCGACTCCAGGCTTTCGGTGTGGCGTGCAGAAGCCACCTGCATTaGGTAGACCCCGTCCTCTACATACTGGAGCCTGGCACCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ERLQAFGVACRSHLH*VDPVLYILEPGTQA Trigger: GGCCTGGGTGCCAGGCTCCAGTATGTAGAGGACGGGGTCTACTCAATGCAGGTGGCTTCTGCACGCCACACCGAAAGCCTGGAGTCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS GCA 90 bp | GTGCTGGCCAGGTCAGATGAGGAGCCCAGGTTTCCCACGTGCTCCTaGAGCATAGCCAGGCGTTGCTCGTACTCCTGGCTCTTGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLARSDEEPRFPTCS*SIARRCSYSWLLDR Trigger: CCTGTCCAAGAGCCAGGAGTACGAGCAACGCCTGGCTATGCTGCAGGAGCACGTGGGAAACCTGGGCTCCTCATCTGACCTGGCCAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS-3UTR CAA 90 bp | CTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACGCCTGTTGCTCCTGCTaGAGGCTCACCAGTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRQVGGGCGVLFRPFRADACCSC*RLTSSR Trigger: GCGGGAACTGGTGAGCCTCAAGCAGGAGCAACAGGC...GTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGAGTCGGCCGCCTGCTaGAACGCCTGTTGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TLRQVGGGCGVLFRPFRAESAAC*NACCSC Trigger: GCAGGAGCAACAGGCGTTCAAGCAGGCGGCCGACTC...AGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS GCA 90 bp | CTGACTGTGCTGGCCAGGTCAGATGAGGAGCCCAGGTTTCCCACGTaGTCCTGCAGCATAGCCAGGCGTTGCTCGTACTCCTGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTVLARSDEEPRFPT*SCSIARRCSYSWLL Trigger: CAAGAGCCAGGAGTACGAGCAACGCCTGGCTATGCTGCAGGAGCACGTGGGAAACCTGGGCTCCTCATCTGACCTGGCCAGCACAGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS GCA 90 bp | TTGAAGACGGCACCTTCCTCTGACCCATGGGCCCCGACCTTCAGCTaGTGTAGCTCTTCCTCCAGTCTCCGGATGTCCTCTGGGAGACGA | + |
|
Preference number: 5 (lower is better) Translates to: LKTAPSSDPWAPTFS*CSSSSSLRMSSGRR Trigger: TCGTCTCCCAGAGGACATCCGGAGACTGGAGGAAGAGCTACAGCAGCTGAAGGTCGGGGCCCATGGGTCAGAGGAAGGTGCCGTCTTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | GTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTTCGTACTCCTGGCTCTaGGACAGGAGCGACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VTPPSLMTQVGHQDQKCTSYSWL*DRSDSR Trigger: CCTGGAGTCGCTCCTGTCCAAGAGCCAGGAGTACGA...AGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | GACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCCAGCATAGCCAGGCGTaGCTCGTACTCCTGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DSQAGWGWMWGPLSPIQSQHSQA*LVLLAL Trigger: AAGAGCCAGGAGTACGAGCAACGCCTGGCTATGCTG...GCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCGACGCGGAGGACGCGTaGGCGGTGGCGGCTGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AQILCGKYSSHIRTQRTPDAEDA*AVAAED Trigger: GTCCTCAGCCGCCACCGCCAACGCGTCCTCCGCGTC...GGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | ATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTGGGCCTTCAGGACCTACTTGTGGCTTGCAGGGATaGGACCTTCTGCTCGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: MTQVGHQDQKCTGPSGPTCGLQG*DLLLDA Trigger: GGCGTCGAGCAGAAGGTCCAATCCCTGCAAGCCACA...AGTAGGTCCTGAAGGCCCAGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS TCA 90 bp | GGCCCTCAATCTGCCTCTGCAGTTCCTCTAAGGCTTTGGAGTCTTTaGAGACGGCACCTTCCTCTGACCCATGGGCCCCGACCTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPQSASAVPLRLWSL*RRHLPLTHGPRPSA Trigger: AGCTGAAGGTCGGGGCCCATGGGTCAGAGGAAGGTGCCGTCTTCAAAGACTCCAAAGCCTTAGAGGAACTGCAGAGGCAGATTGAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CCA 90 bp | TCTAAGGCTTTGGAGTCTTTGAAGACGGCACCTTCCTCTGACCCATaGGCCCCGACCTTCAGCTGCTGTAGCTCTTCCTCCAGTCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SKALESLKTAPSSDP*APTFSCCSSSSSLR Trigger: CCGGAGACTGGAGGAAGAGCTACAGCAGCTGAAGGTCGGGGCCCATGGGTCAGAGGAAGGTGCCGTCTTCAAAGACTCCAAAGCCTTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACCAGTCCCAAATGTGGCTaGCAGGGATTGGACCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGRLGVDVGSSFAHSELTSPKCG*QGLDLL Trigger: CAGAAGGTCCAATCCCTGCAAGCCACATTTGGGACT...GGTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CCA 90 bp | GAAGGGAACTCTTCAGGGCCTCAATGTCCCTCTCCCTCGACATCATaGAGGCCTGGACCTCCTTCACGGCGTCCTTCAGAGTTTTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: EGNSSGPQCPSPSTS*RPGPPSRRPSEFSR Trigger: ACGTGAAAACTCTGAAGGACGCCGTGAAGGAGGTCCAGGCCTCCATGATGTCGAGGGAGAGGGACATTGAGGCCCTGAAGAGTTCCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CCA 90 bp | AAGCCACCTGCATTGAGTAGACCCCGTCCTCTACATACTGGAGCCTaGCACCCAGGCCCTCAATCTGCCTCTGCAGTTCCTCTAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KPPALSRPRPLHTGA*HPGPQSASAVPLRL Trigger: AAGCCTTAGAGGAACTGCAGAGGCAGATTGAGGGCCTGGGTGCCAGGCTCCAGTATGTAGAGGACGGGGTCTACTCAATGCAGGTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGGCGCCGTGGCCGCCCTaGGAGCCCCTTTGTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRCPNPLWKIQLSHQNPKAPWPP*EPLCLA Trigger: GGCCAAACAAAGGGGCTCCAAGGGCGGCCACGGCGC...CTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACCAAGGCTTTGGAGTCTTaGAAGACGGCACCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGRLGVDVGSSFAHSELTKALES*KTAPSS Trigger: AGAGGAAGGTGCCGTCTTCAAAGACTCCAAAGCCTT...GGTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCAAACGCACATGGTGACCTCGTACTCCTGGCTCTaGGACAGGAGCGACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TALTSEPKEHPLQTHMVTSYSWL*DRSDSR Trigger: CCTGGAGTCGCTCCTGTCCAAGAGCCAGGAGTACGA...GGTCACCATGTGCGTTTGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CCA 90 bp | TTCTCCAGGGACGTGAAGTCCCGCTCCCGGGCATCCTTCACCACGTaGATCCCGTCCGACAGATCTTTGAGAATCTCATTCTGCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSRDVKSRSRASFTT*IPSDRSLRISFCNF Trigger: GAAGTTGCAGAATGAGATTCTCAAAGATCTGTCGGACGGGATCCACGTGGTGAAGGATGCCCGGGAGCGGGACTTCACGTCCCTGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTGACCCCTCCTAGCCTGATGACACAGGTGGGTCACCAGGACCAGAAGTGCTTCATCTTGACCTCATaGATCTCCTTCTGGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MVTPPSLMTQVGHQDQKCFILTS*ISFWLL Trigger: GAGGAGCCAGAAGGAGATCAATGAGGTCAAGATGAA...GCACTTCTGGTCCTGGTGACCCACCTGTGTCATCAGGCTAGGAGGGGTCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCGCCTGTTGCTCCTGCTaGAGGCTCACCAGTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AQILCGKYSSHIRTQRTPACCSC*RLTSSR Trigger: GCGGGAACTGGTGAGCCTCAAGCAGGAGCAACAGGC...GGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTATGGCGATGTTGTCATaGATAGACTTGGTAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLRQVGGGCGVLFRPFRAMAMLS*IDLVSS Trigger: GGAGCTTACCAAGTCTATCAATGACAACATCGCCAT...AGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGGCAGGTTGGGGGTGGATGTGGGGTCCTCTTTCGCCCATTCAGAGCTGACGTGAAGATGGCGATGTaGTCATTGATAGACTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRQVGGGCGVLFRPFRADVKMAM*SLIDLV Trigger: TACCAAGTCTATCAATGACAACATCGCCATCTTCAC...GTCAGCTCTGAATGGGCGAAAGAGGACCCCACATCCACCCCCAACCTGCCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS GCA 90 bp | TCGCTCTCCCCTTCCTTCACGGCTTTCTCTGTGAGATCCTGTTTATaGTGGGAGTTTCTCAGGAGGGACTCGAAAGTCCCAAATGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSPSFTAFSVRSCL*WEFLRRDSKVPNVA Trigger: AGCCACATTTGGGACTTTCGAGTCCCTCCTGAGAAACTCCCAGCATAAACAGGATCTCACAGAGAAAGCCGTGAAGGAAGGGGAGAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CCA 90 bp | CTCTCCCCTTCCTTCACGGCTTTCTCTGTGAGATCCTGTTTATGCTaGGAGTTTCTCAGGAGGGACTCGAAAGTCCCAAATGTGGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSPSFTAFSVRSCLC*EFLRRDSKVPNVAC Trigger: GCAAGCCACATTTGGGACTTTCGAGTCCCTCCTGAGAAACTCCCAGCATAAACAGGATCTCACAGAGAAAGCCGTGAAGGAAGGGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | ATGACACAGGTGGGTCACCAGGACCAGAAGTGCACTGGGCCTTCAGGACCTACTGTGAAGATGGCGATGTaGTCATTGATAGACTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: MTQVGHQDQKCTGPSGPTVKMAM*SLIDLV Trigger: TACCAAGTCTATCAATGACAACATCGCCATCTTCAC...AGTAGGTCCTGAAGGCCCAGTGCACTTCTGGTCCTGGTGACCCACCTGTGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | CGCTGTGATAAAACAAAAAGACCTGGCCCACATCTCTCGGGAAGATGCCCAAATCAGAAGCCACCTGCATaGAGTAGACCCCGTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: RCDKTKRPGPHLSGRCPNQKPPA*SRPRPL Trigger: TAGAGGACGGGGTCTACTCAATGCAGGTGGCTTCTG...ATTTGGGCATCTTCCCGAGAGATGTGGGCCAGGTCTTTTTGTTTTATCACAGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053871.5 |
||
| CDS-3UTR CAA 90 bp | GCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCAGTCCCAAATGTGGCTaGCAGGGATTGGACCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AQILCGKYSSHIRTQRTPSPKCG*QGLDLL Trigger: CAGAAGGTCCAATCCCTGCAAGCCACATTTGGGACT...GGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | GAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGACTGCTTGAACGCCTGTaGCTCCTGCTTGAGGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: EDAQILCGKYSSHIRTQRLLERL*LLLEAH Trigger: GTGAGCCTCAAGCAGGAGCAACAGGCGTTCAAGCAG...TCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCAGTTAAAGCCACTGTCATCTTTCTAACAGGAGACACATCCTTTTCTGCACAGCATAGCCAGGCGTaGCTCGTACTCCTGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SPVKATVIFLTGDTSFSAQHSQA*LVLLAL Trigger: AAGAGCCAGGAGTACGAGCAACGCCTGGCTATGCTG...TGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGACAGTGGCTTTAACTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS GCA 90 bp | TTCACCACGTGGATCCCGTCCGACAGATCTTTGAGAATCTCATTCTaGAACTTCTGTAGAACTTCGCTAATTCGGTTGAGCTCGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTTWIPSDRSLRISF*NFCRTSLIRLSSLS Trigger: GGAGAGCGAGCTCAACCGAATTAGCGAAGTTCTACAGAAGTTGCAGAATGAGATTCTCAAAGATCTGTCGGACGGGATCCACGTGGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | GAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACTTCGCTAATTCGGTaGAGCTCGCTCTCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EDAQILCGKYSSHIRTQRTSLIR*SSLSPS Trigger: GGAAGGGGAGAGCGAGCTCAACCGAATTAGCGAAGT...TCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCAGTTAAAGCCACTGTCATCTTTCTAACAGGAGACACATCCTTTTCTGCAACTTCGCTAATTCGGTaGAGCTCGCTCTCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPVKATVIFLTGDTSFSATSLIR*SSLSPS Trigger: GGAAGGGGAGAGCGAGCTCAACCGAATTAGCGAAGT...TGCAGAAAAGGATGTGTCTCCTGTTAGAAAGATGACAGTGGCTTTAACTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCTTGTCATTGATAGACTaGGTAAGCTCCGTCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AQILCGKYSSHIRTQRTPLSLID*VSSVRR Trigger: GCGCCTGACGGAGCTTACCAAGTCTATCAATGACAA...GGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | GAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGACAGAAGCCACCTGCATaGAGTAGACCCCGTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: EDAQILCGKYSSHIRTQRQKPPA*SRPRPL Trigger: TAGAGGACGGGGTCTACTCAATGCAGGTGGCTTCTG...TCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCACCGTCCGACAGATCTTaGAGAATCTCATTCTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ILCGKYSSHIRTQRTPPPPSDRS*RISFCN Trigger: GTTGCAGAATGAGATTCTCAAAGATCTGTCGGACGG...TGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCCCGTCCGACAGATCTTaGAGAATCTCATTCTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: AQILCGKYSSHIRTQRTPPSDRS*RISFCN Trigger: GTTGCAGAATGAGATTCTCAAAGATCTGTCGGACGG...GGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCTTCATCTTGACCTCATaGATCTCCTTCTGGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AQILCGKYSSHIRTQRTPFILTS*ISFWLL Trigger: GAGGAGCCAGAAGGAGATCAATGAGGTCAAGATGAA...GGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACCCCCTCCAACTGAGGATTTCAGGTaGTCTAGAGAGGACAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILCGKYSSHIRTQRTPPPTEDFR*SREDSL Trigger: CAGACTGTCCTCTCTAGACAACCTGAAATCCTCAGT...TGGAGGGGGTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CCA 90 bp | GCCACCTTCATCTTGACCTCATTGATCTCCTTCTGGCTCCTCTTCTaGACATCAGTGAAGATGGCGATGTTGTCATTGATAGACTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ATFILTSLISFWLLF*TSVKMAMLSLIDLV Trigger: TACCAAGTCTATCAATGACAACATCGCCATCTTCACTGATGTCCAGAAGAGGAGCCAGAAGGAGATCAATGAGGTCAAGATGAAGGTGGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGAACACAAGGCTTTGGAGTCTTaGAAGACGGCACCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MPKSSVENTALTSEPKEHKALES*KTAPSS Trigger: AGAGGAAGGTGCCGTCTTCAAAGACTCCAAAGCCTT...GTGTTCTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGATGCCCAAATCCTCTGTGGAAAATACAGCTCTCACATCAGAACCCAAAGACTGAGGATTTCAGGTaGTCTAGAGAGGACAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRCPNPLWKIQLSHQNPKTEDFR*SREDSL Trigger: CAGACTGTCCTCTCTAGACAACCTGAAATCCTCAGT...CTTTGGGTTCTGATGTGAGAGCTGTATTTTCCACAGAGGATTTGGGCATCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | AAATGGAAGACAAGAATGAGACAGCTTCTAAAAACCCTGGCCAGGAGTATAAAATTGTCATTGATAGACTaGGTAAGCTCCGTCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KWKTRMRQLLKTLARSIKLSLID*VSSVRR Trigger: GCGCCTGACGGAGCTTACCAAGTCTATCAATGACAA...TTTTATACTCCTGGCCAGGGTTTTTAGAAGCTGTCTCATTCTTGTCTTCCATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS-3UTR CAA 90 bp | AAATGGAAGACAAGAATGAGACAGCTTCTAAAAACCCTGGCCAGGAGTATAAAAATGGCGATGTTGTCATaGATAGACTTGGTAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KWKTRMRQLLKTLARSIKMAMLS*IDLVSS Trigger: GGAGCTTACCAAGTCTATCAATGACAACATCGCCAT...TTTTATACTCCTGGCCAGGGTTTTTAGAAGCTGTCTCATTCTTGTCTTCCATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CCA 72 bp | GACGCGTTGGCGGTGGCGGCTGAGGACCGGCCGCGGTaGCCGCCCCGGTGCGCCTGGTTCTGCGGGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DALAVAAEDRPR*PPRCAWFCGCC Trigger: GCAGCACCCGCAGAACCAGGCGCACCGGGGCGGCCACCGCGGCCGGTCCTCAGCCGCCACCGCCAACGCGTC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CCA 72 bp | GGCTTCTTCGCCACGTCATCCGCGCCGCCCGACGGGTaGGCGCCCTTGTCCGAGGGGCTCGCGGCGCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GFFATSSAPPDG*APLSEGLAAPW Trigger: CCACGGCGCCGCGAGCCCCTCGGACAAGGGCGCCCACCCGTCGGGCGGCGCGGATGACGTGGCGAAGAAGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CAA 90 bp | GGCTTCTTCGCCACGTCATCCGCGCCGCCCGACGGGTGGGCGCCCTaGTCCGAGGGGCTCGCGGCGCCGTGGCCGCCCTTGGAGCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GFFATSSAPPDGWAP*SEGLAAPWPPLEPL Trigger: AAGGGGCTCCAAGGGCGGCCACGGCGCCGCGAGCCCCTCGGACAAGGGCGCCCACCCGTCGGGCGGCGCGGATGACGTGGCGAAGAAGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CCA 72 bp | GGGTGGGCGCCCTTGTCCGAGGGGCTCGCGGCGCCGTaGCCGCCCTTGGAGCCCCTTTGTTTGGCCGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GWAPLSEGLAAP*PPLEPLCLAEG Trigger: GCCCTCGGCCAAACAAAGGGGCTCCAAGGGCGGCCACGGCGCCGCGAGCCCCTCGGACAAGGGCGCCCACCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS TCA 72 bp | TGGCCACGCCGGACCTGCTGGACCTCCTCCAGGACGTaGTGGACATACCAGCCCGAGAAGGCGGCCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: WPRRTCWTSSRT*WTYQPEKAAAA Trigger: GGCGGCGGCCGCCTTCTCGGGCTGGTATGTCCATCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGTGGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS TCA 72 bp | CGGCCGCCGCCACCAGGGAGAGGTAGAAGAGAAAGTTaGGCACCCGGCCAAGCCTGCGCGAGCAGGACGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RPPPPGRGRRES*APGQACASRTR Trigger: CCGCGTCCTGCTCGCGCAGGCTTGGCCGGGTGCTCAACTTTCTCTTCTACCTCTCCCTGGTGGCGGCGGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS TCA 72 bp | GAGAGGAGGACTCCTCGGACCGCAGAAGCTTCTCCGTaGGGGCCTGCAGAGCCAGGCGCTCTGAGTCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ERRTPRTAEASP*GPAEPGALSRP Trigger: CGGCCGACTCAGAGCGCCTGGCTCTGCAGGCCCTCACGGAGAAGCTTCTGCGGTCCGAGGAGTCCTCCTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS TCA 72 bp | CGCTGGACAGCGCCAGCTGGGTCTCCCCCAGGCTCCTaGCTGTGCTGGCCAGGTCAGATGAGGAGCCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RWTAPAGSPPGS*LCWPGQMRSPG Trigger: ACCTGGGCTCCTCATCTGACCTGGCCAGCACAGTCAGGAGCCTGGGGGAGACCCAGCTGGCGCTGTCCAGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS GCA 72 bp | GACTCCTCGGACCGCAGAAGCTTCTCCGTGAGGGCCTaGAGAGCCAGGCGCTCTGAGTCGGCCGCCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DSSDRRSFSVRA*RARRSESAACL Trigger: CAAGCAGGCGGCCGACTCAGAGCGCCTGGCTCTGCAGGCCCTCACGGAGAAGCTTCTGCGGTCCGAGGAGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CAA 90 bp | TCCGTGAGGGCCTGCAGAGCCAGGCGCTCTGAGTCGGCCGCCTGCTaGAACGCCTGTTGCTCCTGCTTGAGGCTCACCAGTTCCCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SVRACRARRSESAAC*NACCSCLRLTSSRT Trigger: GGTGCGGGAACTGGTGAGCCTCAAGCAGGAGCAACAGGCGTTCAAGCAGGCGGCCGACTCAGAGCGCCTGGCTCTGCAGGCCCTCACGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS TCA 72 bp | CCGTCAGGCGCTCCTCGACTGTGTTCTCCAGGGACGTaGAGTCCCGCTCCCGGGCATCCTTCACCACGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSGAPRLCSPGT*SPAPGHPSPRG Trigger: TCCACGTGGTGAAGGATGCCCGGGAGCGGGACTTCACGTCCCTGGAGAACACAGTCGAGGAGCGCCTGACGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS CAA 72 bp | GCCTGCAGAGCCAGGCGCTCTGAGTCGGCCGCCTGCTaGAACGCCTGTTGCTCCTGCTTGAGGCTCACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ACRARRSESAAC*NACCSCLRLTS Trigger: ACTGGTGAGCCTCAAGCAGGAGCAACAGGCGTTCAAGCAGGCGGCCGACTCAGAGCGCCTGGCTCTGCAGGC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS TCA 72 bp | CTCCCCCAGGCTCCTGACTGTGCTGGCCAGGTCAGATaGGGAGCCCAGGTTTCCCACGTGCTCCTGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LPQAPDCAGQVR*GAQVSHVLLQH Trigger: ATGCTGCAGGAGCACGTGGGAAACCTGGGCTCCTCATCTGACCTGGCCAGCACAGTCAGGAGCCTGGGGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
||
| CDS GCA 72 bp | AGTGACTCCACGGTACCGGGCAGCTCACCCAGGCTCTaGTTCAGCTCCTTCAAGTCGCTGGACAGCGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SDSTVPGSSPRL*FSSFKSLDSAS Trigger: GCTGGCGCTGTCCAGCGACTTGAAGGAGCTGAAGCAGAGCCTGGGTGAGCTGCCCGGTACCGTGGAGTCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS GCA 72 bp | GCTTGGTCCTGGCTGAGCAGTGAGAGCACTTGCTCCTaGAGTGACTCCACGGTACCGGGCAGCTCACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: AWSWLSSESTCS*SDSTVPGSSPR Trigger: CCTGGGTGAGCTGCCCGGTACCGTGGAGTCACTGCAGGAGCAAGTGCTCTCACTGCTCAGCCAGGACCAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 90 bp | GGAGCGACTCCAGGCTTTCGGTGTGGCGTGCAGAAGCCACCTGCATaGAGTAGACCCCGTCCTCTACATACTGGAGCCTGGCACCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GATPGFRCGVQKPPA*SRPRPLHTGAWHPG Trigger: GCCTGGGTGCCAGGCTCCAGTATGTAGAGGACGGGGTCTACTCAATGCAGGTGGCTTCTGCACGCCACACCGAAAGCCTGGAGTCGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS GCA 72 bp | GCACCTTCCTCTGACCCATGGGCCCCGACCTTCAGCTaGTGTAGCTCTTCCTCCAGTCTCCGGATGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: APSSDPWAPTFS*CSSSSSLRMSS Trigger: AGAGGACATCCGGAGACTGGAGGAAGAGCTACAGCAGCTGAAGGTCGGGGCCCATGGGTCAGAGGAAGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS GCA 72 bp | AGGTTTCCCACGTGCTCCTGCAGCATAGCCAGGCGTTaGTCGTACTCCTGGCTCTTGGACAGGAGCGACTCC | + |
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Preference number: 6 (lower is better) Translates to: RFPTCSCSIARR*SYSWLLDRSDS Trigger: GGAGTCGCTCCTGTCCAAGAGCCAGGAGTACGAGCAACGCCTGGCTATGCTGCAGGAGCACGTGGGAAACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS GCA 72 bp | AGGTCAGATGAGGAGCCCAGGTTTCCCACGTGCTCCTaGAGCATAGCCAGGCGTTGCTCGTACTCCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: RSDEEPRFPTCS*SIARRCSYSWL Trigger: GAGCCAGGAGTACGAGCAACGCCTGGCTATGCTGCAGGAGCACGTGGGAAACCTGGGCTCCTCATCTGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 72 bp | CAGGTTTCCCACGTGCTCCTGCAGCATAGCCAGGCGTaGCTCGTACTCCTGGCTCTTGGACAGGAGCGACTC | + |
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Preference number: 6 (lower is better) Translates to: QVSHVLLQHSQA*LVLLALGQERL Trigger: GAGTCGCTCCTGTCCAAGAGCCAGGAGTACGAGCAACGCCTGGCTATGCTGCAGGAGCACGTGGGAAACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS TCA 72 bp | CAGGCTTTCGGTGTGGCGTGCAGAAGCCACCTGCATTaGGTAGACCCCGTCCTCTACATACTGGAGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: QAFGVACRSHLH*VDPVLYILEPG Trigger: GCCAGGCTCCAGTATGTAGAGGACGGGGTCTACTCAATGCAGGTGGCTTCTGCACGCCACACCGAAAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CCA 72 bp | TCTTCAGGGCCTCAATGTCCCTCTCCCTCGACATCATaGAGGCCTGGACCTCCTTCACGGCGTCCTTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SSGPQCPSPSTS*RPGPPSRRPSE Trigger: CTCTGAAGGACGCCGTGAAGGAGGTCCAGGCCTCCATGATGTCGAGGGAGAGGGACATTGAGGCCCTGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 72 bp | CCAGGCTTTCGGTGTGGCGTGCAGAAGCCACCTGCATaGAGTAGACCCCGTCCTCTACATACTGGAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PGFRCGVQKPPA*SRPRPLHTGAW Trigger: CCAGGCTCCAGTATGTAGAGGACGGGGTCTACTCAATGCAGGTGGCTTCTGCACGCCACACCGAAAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS TCA 72 bp | ACCTCCTTCACGGCGTCCTTCAGAGTTTTCACGTCCTaGCTGCGATCCCCCTTGGATTCTTCCAGGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: TSFTASFRVFTS*LRSPLDSSREA Trigger: GGCCTCCCTGGAAGAATCCAAGGGGGATCGCAGTCAGGACGTGAAAACTCTGAAGGACGCCGTGAAGGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS GCA 72 bp | CCTTCACGGCGTCCTTCAGAGTTTTCACGTCCTGACTaGGATCCCCCTTGGATTCTTCCAGGGAGGCCACCT | + |
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Preference number: 6 (lower is better) Translates to: PSRRPSEFSRPD*DPPWILPGRPP Trigger: AGGTGGCCTCCCTGGAAGAATCCAAGGGGGATCGCAGTCAGGACGTGAAAACTCTGAAGGACGCCGTGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CCA 72 bp | TTGGAGTCTTTGAAGACGGCACCTTCCTCTGACCCATaGGCCCCGACCTTCAGCTGCTGTAGCTCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LESLKTAPSSDP*APTFSCCSSSS Trigger: GGAGGAAGAGCTACAGCAGCTGAAGGTCGGGGCCCATGGGTCAGAGGAAGGTGCCGTCTTCAAAGACTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS TCA 72 bp | TCTGCCTCTGCAGTTCCTCTAAGGCTTTGGAGTCTTTaGAGACGGCACCTTCCTCTGACCCATGGGCCCCGA | + |
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Preference number: 6 (lower is better) Translates to: SASAVPLRLWSL*RRHLPLTHGPR Trigger: TCGGGGCCCATGGGTCAGAGGAAGGTGCCGTCTTCAAAGACTCCAAAGCCTTAGAGGAACTGCAGAGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CCA 72 bp | GACGTGAAGTCCCGCTCCCGGGCATCCTTCACCACGTaGATCCCGTCCGACAGATCTTTGAGAATCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: DVKSRSRASFTT*IPSDRSLRISF Trigger: GAATGAGATTCTCAAAGATCTGTCGGACGGGATCCACGTGGTGAAGGATGCCCGGGAGCGGGACTTCACGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS GCA 72 bp | TTTCTCAGGAGGGACTCGAAAGTCCCAAATGTGGCTTaGAGGGATTGGACCTTCTGCTCGACGCCCTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: FLRRDSKVPNVA*RDWTFCSTPCK Trigger: CTTGCAGGGCGTCGAGCAGAAGGTCCAATCCCTGCAAGCCACATTTGGGACTTTCGAGTCCCTCCTGAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 72 bp | GTTTCTCAGGAGGGACTCGAAAGTCCCAAATGTGGCTaGCAGGGATTGGACCTTCTGCTCGACGCCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: VSQEGLESPKCG*QGLDLLLDALQ Trigger: TTGCAGGGCGTCGAGCAGAAGGTCCAATCCCTGCAAGCCACATTTGGGACTTTCGAGTCCCTCCTGAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 90 bp | TCCCCCTTGGATTCTTCCAGGGAGGCCACCTTCATCTTGACCTCATaGATCTCCTTCTGGCTCCTCTTCTGGACATCAGTGAAGATGGCG | + |
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Preference number: 6 (lower is better) Translates to: SPLDSSREATFILTS*ISFWLLFWTSVKMA Trigger: CGCCATCTTCACTGATGTCCAGAAGAGGAGCCAGAAGGAGATCAATGAGGTCAAGATGAAGGTGGCCTCCCTGGAAGAATCCAAGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 90 bp | CGCTCCCGGGCATCCTTCACCACGTGGATCCCGTCCGACAGATCTTaGAGAATCTCATTCTGCAACTTCTGTAGAACTTCGCTAATTCGG | + |
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Preference number: 6 (lower is better) Translates to: RSRASFTTWIPSDRS*RISFCNFCRTSLIR Trigger: CCGAATTAGCGAAGTTCTACAGAAGTTGCAGAATGAGATTCTCAAAGATCTGTCGGACGGGATCCACGTGGTGAAGGATGCCCGGGAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 90 bp | CTCTTCTGGACATCAGTGAAGATGGCGATGTTGTCATTGATAGACTaGGTAAGCTCCGTCAGGCGCTCCTCGACTGTGTTCTCCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: LFWTSVKMAMLSLID*VSSVRRSSTVFSRD Trigger: GTCCCTGGAGAACACAGTCGAGGAGCGCCTGACGGAGCTTACCAAGTCTATCAATGACAACATCGCCATCTTCACTGATGTCCAGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 90 bp | TTCTGGCTCCTCTTCTGGACATCAGTGAAGATGGCGATGTTGTCATaGATAGACTTGGTAAGCTCCGTCAGGCGCTCCTCGACTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: FWLLFWTSVKMAMLS*IDLVSSVRRSSTVF Trigger: GAACACAGTCGAGGAGCGCCTGACGGAGCTTACCAAGTCTATCAATGACAACATCGCCATCTTCACTGATGTCCAGAAGAGGAGCCAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 90 bp | ATCTCCTTCTGGCTCCTCTTCTGGACATCAGTGAAGATGGCGATGTaGTCATTGATAGACTTGGTAAGCTCCGTCAGGCGCTCCTCGACT | + |
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Preference number: 6 (lower is better) Translates to: ISFWLLFWTSVKMAM*SLIDLVSSVRRSST Trigger: AGTCGAGGAGCGCCTGACGGAGCTTACCAAGTCTATCAATGACAACATCGCCATCTTCACTGATGTCCAGAAGAGGAGCCAGAAGGAGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS GCA 72 bp | CCTTCCTTCACGGCTTTCTCTGTGAGATCCTGTTTATaGTGGGAGTTTCTCAGGAGGGACTCGAAAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: PSFTAFSVRSCL*WEFLRRDSKVP Trigger: TGGGACTTTCGAGTCCCTCCTGAGAAACTCCCAGCATAAACAGGATCTCACAGAGAAAGCCGTGAAGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 72 bp | CTCTTCTGGACATCAGTGAAGATGGCGATGTTGTCATaGATAGACTTGGTAAGCTCCGTCAGGCGCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LFWTSVKMAMLS*IDLVSSVRRSS Trigger: CGAGGAGCGCCTGACGGAGCTTACCAAGTCTATCAATGACAACATCGCCATCTTCACTGATGTCCAGAAGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 72 bp | TGGCTCCTCTTCTGGACATCAGTGAAGATGGCGATGTaGTCATTGATAGACTTGGTAAGCTCCGTCAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: WLLFWTSVKMAM*SLIDLVSSVRR Trigger: GCGCCTGACGGAGCTTACCAAGTCTATCAATGACAACATCGCCATCTTCACTGATGTCCAGAAGAGGAGCCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 72 bp | ACATCAGTGAAGATGGCGATGTTGTCATTGATAGACTaGGTAAGCTCCGTCAGGCGCTCCTCGACTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: TSVKMAMLSLID*VSSVRRSSTVF Trigger: GAACACAGTCGAGGAGCGCCTGACGGAGCTTACCAAGTCTATCAATGACAACATCGCCATCTTCACTGATGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CCA 72 bp | TCCTTCACGGCTTTCTCTGTGAGATCCTGTTTATGCTaGGAGTTTCTCAGGAGGGACTCGAAAGTCCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SFTAFSVRSCLC*EFLRRDSKVPN Trigger: ATTTGGGACTTTCGAGTCCCTCCTGAGAAACTCCCAGCATAAACAGGATCTCACAGAGAAAGCCGTGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 72 bp | TCATTCTGCAACTTCTGTAGAACTTCGCTAATTCGGTaGAGCTCGCTCTCCCCTTCCTTCACGGCTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SFCNFCRTSLIR*SSLSPSFTAFS Trigger: AGAGAAAGCCGTGAAGGAAGGGGAGAGCGAGCTCAACCGAATTAGCGAAGTTCTACAGAAGTTGCAGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 90 bp | TTGAGAATCTCATTCTGCAACTTCTGTAGAACTTCGCTAATTCGGTaGAGCTCGCTCTCCCCTTCCTTCACGGCTTTCTCTGTGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: LRISFCNFCRTSLIR*SSLSPSFTAFSVRS Trigger: GGATCTCACAGAGAAAGCCGTGAAGGAAGGGGAGAGCGAGCTCAACCGAATTAGCGAAGTTCTACAGAAGTTGCAGAATGAGATTCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS CAA 90 bp | AGAAACAACCTATCCAGGTCGTTCCGCAGGTCATCCAGCAAGCCCTaGGCTGACTCTAAGTTATTCTCATTCGTTTCGATTTTGACGGAA | + |
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Preference number: 6 (lower is better) Translates to: RNNLSRSFRRSSSKP*ADSKLFSFVSILTE Trigger: TTCCGTCAAAATCGAAACGAATGAGAATAACTTAGAGTCAGCCAAGGGCTTGCTGGATGACCTGCGGAACGACCTGGATAGGTTGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS TCA 72 bp | TGGCTGACTCTAAGTTATTCTCATTCGTTTCGATTTTaGCGGAATAGGCCACCAAACTGTCCACGGCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: WLTLSYSHSFRF*RNRPPNCPRQS Trigger: GGACTGCCGTGGACAGTTTGGTGGCCTATTCCGTCAAAATCGAAACGAATGAGAATAACTTAGAGTCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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| CDS GCA 72 bp | TGGATCCCGTCCGACAGATCTTTGAGAATCTCATTCTaGAACTTCTGTAGAACTTCGCTAATTCGGTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: WIPSDRSLRISF*NFCRTSLIRLS Trigger: GCTCAACCGAATTAGCGAAGTTCTACAGAAGTTGCAGAATGAGATTCTCAAAGATCTGTCGGACGGGATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053871.5 ENSMUST00000167671.2 |
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