Pregenerated sensors for CKAP2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048327Ensembl transcript IDs: ENSMUST00000052708.7
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCATTTCTCAATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCTaGGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: AFLNNKCKRRTVNKT*AATSILDCASLEES Trigger: GCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATTGAGAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| 3UTR-3UTR TCA 90 bp | GAAGCATTTCTCAATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCTGGGCTTCAATGCATTCCTTCTaGGACCAAAGAGTCTACCAC | + |
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Preference number: 2 (lower is better) Translates to: EAFLNNKCKRRTVNKTWASMHSF*DQRVYH Trigger: GTGGTAGACTCTTTGGTCTCAGAAGGAATGCATTGA...AGCCCAGGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATTGAGAAATGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| 3UTR GCA 72 bp | GTCCAAGGTGCAGAAAAGATCCCCTGCCATAGTCTCTaGGGTGCTCGTGGCCTCCTCAGGCTACCAGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: VQGAEKIPCHSL*GARGLLRLPVL Trigger: GAGGACTGGTAGCCTGAGGAGGCCACGAGCACCGCAGAGACTATGGCAGGGGATCTTTTCTGCACCTTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| 3UTR GCA 72 bp | CCAGGAGCAGTTGTCCAAGGTGCAGAAAAGATCCCCTaGCATAGTCTCTGCGGTGCTCGTGGCCTCCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PGAVVQGAEKIP*HSLCGARGLLR Trigger: CCTGAGGAGGCCACGAGCACCGCAGAGACTATGGCAGGGGATCTTTTCTGCACCTTGGACAACTGCTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| 3UTR GCA 72 bp | TGGTGTCAAAAGTCAACCCTTTGTACTCTAGAAGCCTaGCCTCCAGGTAGTGTGGATGCTGAAAAACTATGC | + |
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Preference number: 3 (lower is better) Translates to: WCQKSTLCTLEA*PPGSVDAEKLC Trigger: GCATAGTTTTTCAGCATCCACACTACCTGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTTTTGACACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| 3UTR CCA 72 bp | TGTAATCTGTGGAGTTTGACTTTCCGCCTGGTGAGCTaGTGTCAAAAGTCAACCCTTTGTACTCTAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: CNLWSLTFRLVS*CQKSTLCTLEA Trigger: GGCTTCTAGAGTACAAAGGGTTGACTTTTGACACCAGCTCACCAGGCGGAAAGTCAAACTCCACAGATTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| 3UTR TCA 72 bp | TTCCTTCTGAGACCAAAGAGTCTACCACCTGCATGGTaGGGTCTCAGCAAACATTTATTTCATGTCATCTTG | + |
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Preference number: 3 (lower is better) Translates to: FLLRPKSLPPAW*GLSKHLFHVIL Trigger: CAAGATGACATGAAATAAATGTTTGCTGAGACCTCACCATGCAGGTGGTAGACTCTTTGGTCTCAGAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| 3UTR CCA 72 bp | AATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCTaGGCTGCCACCTCAATTCTGGACTGTGCTTCACTA | + |
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Preference number: 3 (lower is better) Translates to: NNKCKRRTVNKT*AATSILDCASL Trigger: TAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | ACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGCCACCCATGGGCTGGAACGGAATaGGAGGGAGCTGTTTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: TWAATSILDCASLEESHPWAGTE*EGAVCG Trigger: CCCACAAACAGCTCCCTCTCATTCCGTTCCAGCCCA...TGGGTGGCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | ACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGCCACCCATTGCGGCTGCTGTACTaGCTTGAGTCCTGGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TWAATSILDCASLEESHPLRLLY*LESWEQ Trigger: CTGCTCCCAGGACTCAAGCCAGTACAGCAGCCGCAA...TGGGTGGCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR GCA 90 bp | ACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGCCACCCAAGAGATGGGCAAGGCTaGTCAGATTCCTCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TWAATSILDCASLEESHPRDGQG*SDSSLA Trigger: GGCCAAGGAGGAATCTGAGCAGCCTTGCCCATCTCT...TGGGTGGCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR GCA 90 bp | GGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGCCACCCAGAGAGGCCACCACCACATCATaGTCCTGCAGCATTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GCHLNSGLCFTRGKPPREATTTS*SCSISG Trigger: CCCAGAAATGCTGCAGGAGCATGATGTGGTGGTGGC...CTCTCTGGGTGGCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | GGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGCCACCCAGAGAGCAGTCCTGCAGTGAATaGCACTGCTCTAGGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GCHLNSGLCFTRGKPPREQSCSE*HCSRLL Trigger: CAGCAACCTAGAGCAGTGTCATTCACTGCAGGACTG...CTCTCTGGGTGGCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | GGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGCCACCCAGAGAGGGTGTTGCCCCGTTCTaGATGGCCTCTTCGTATAGT | + |
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Preference number: 4 (lower is better) Translates to: GCHLNSGLCFTRGKPPREGVAPF*MASSYS Trigger: ACTATACGAAGAGGCCATTCAGAACGGGGCAACACC...CTCTCTGGGTGGCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | GACTGTGCTTCACTAGAGGAAAGCCACCCAGAGAGGACAAGCGTCCCCCTCATCTTCGACTCTGGCTTCTaGGATGCTGTGATACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: DCASLEESHPERTSVPLIFDSGF*DAVILA Trigger: AGCCAGTATCACAGCATCCCAGAAGCCAGAGTCGAA...GATGAGGGGGACGCTTGTCCTCTCTGGGTGGCTTTCCTCTAGTGAAGCACAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | CTGGTGAGCTGGTGTCAAAAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCAAGTCTGGGTCGCACTTaGGGCTCCCTTCCTACTTGC | + |
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Preference number: 4 (lower is better) Translates to: LVSWCQKSTLCTLEACPPSLGRT*GSLPTC Trigger: GCAAGTAGGAAGGGAGCCCCAAGTGCGACCCAGACT...TGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTTTTGACACCAGCTCACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR GCA 90 bp | CTGGTGAGCTGGTGTCAAAAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCACCGCGGTGCTGCTGCTaGAATAGGCTCCATTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LVSWCQKSTLCTLEACPPPRCCC*NRLHFC Trigger: ACAGAAATGGAGCCTATTGCAGCAGCAGCACCGCGG...TGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTTTTGACACCAGCTCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR GCA 90 bp | TACATGAACCAAAAGCCTTCTCATGGGGATATACAATCTGAGAGTAAACTCAATCCGTTCTTCCGCGGCTaGGCTGGCAGTGGGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: YMNQKPSHGDIQSESKLNPFFRG*AGSGAG Trigger: CCCGGCCCCACTGCCAGCGCAGCCGCGGAAGAACGG...ATTGAGTTTACTCTCAGATTGTATATCCCCATGAGAAGGCTTTTGGTTCATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | ACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGCCACCCACATGTCTTGCACTTCTaGCATCCCGCATATTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: TWAATSILDCASLEESHPHVLHF*HPAYSR Trigger: CCTAGAATATGCGGGATGCCAGAAGTGCAAGACATG...TGGGTGGCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | GGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGCCACCCAGAGAGTTGGACAGCTCCAGCTaGGCTTTCTTTTCTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GCHLNSGLCFTRGKPPRELDSSS*AFFSSS Trigger: AGAAGAAGAAAAGAAAGCTCAGCTGGAGCTGTCCAA...CTCTCTGGGTGGCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR GCA 90 bp | GACTGTGCTTCACTAGAGGAAAGCCACCCAGAGAGGACAAGCGTCCCCCTCATCGGAGTCCAATGTCTGTaGCTTTTGTTGAAAGATGTT | + |
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Preference number: 4 (lower is better) Translates to: DCASLEESHPERTSVPLIGVQCL*LLLKDV Trigger: AACATCTTTCAACAAAAGGCACAGACATTGGACTCC...GATGAGGGGGACGCTTGTCCTCTCTGGGTGGCTTTCCTCTAGTGAAGCACAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | CTTTGTACTCTAGAAGCCTGCCCTCCAGGTAGTGTGGATGCTGAAAAACTATGCCCTTTAGCTTTCCCTTaGCTGCCAGGTACTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LCTLEACPPGSVDAEKLCPLAFP*LPGTPG Trigger: TCCAGGAGTACCTGGCAGCCAAGGGAAAGCTAAAGG...GCATAGTTTTTCAGCATCCACACTACCTGGAGGGCAGGCTTCTAGAGTACAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | ACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGCCACCCAAGGAGTATATTTAGATaGTGGTGGTTTGGGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: TWAATSILDCASLEESHPRSIFR*WWFGAD Trigger: ATCTGCCCCAAACCACCACCATCTAAATATACTCCT...TGGGTGGCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | AGGACTGTAAATAAAACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTATGGCTTCTCAGGTTTTaGCAGGGCCTGGGGCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: RTVNKTWAATSILDCASLWLLRF*QGLGQV Trigger: AACTTGCCCCAGGCCCTGCCAAAACCTGAGAAGCCA...TAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGTTTTATTTACAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | GACTGTGCTTCACTAGAGGAAAGCCACCCAGAGAGGACAAGCGTCCCCCTCATCGTCAAATTAGGCCTCTaGCTTATGGCTCTTGATTTT | + |
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Preference number: 4 (lower is better) Translates to: DCASLEESHPERTSVPLIVKLGL*LMALDF Trigger: AAAATCAAGAGCCATAAGCCAGAGGCCTAATTTGAC...GATGAGGGGGACGCTTGTCCTCTCTGGGTGGCTTTCCTCTAGTGAAGCACAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | CTGGTGAGCTGGTGTCAAAAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCATGCTGTCGATTTTCTTaGACAGCTCCAGCTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LVSWCQKSTLCTLEACPPCCRFS*TAPAEL Trigger: AAGCTCAGCTGGAGCTGTCCAAGAAAATCGACAGCA...TGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTTTTGACACCAGCTCACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | AGGACTGTAAATAAAACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGCTCTAGGTTGCTGCTaGGGCTTGCTGGACTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: RTVNKTWAATSILDCASLALGCC*GLLDCL Trigger: TAAACAGTCCAGCAAGCCTCAGCAGCAACCTAGAGC...TAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGTTTTATTTACAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR GCA 90 bp | CTGGTGAGCTGGTGTCAAAAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCAATAAGCTTCATGTCTTaGACTTCTGGCATCCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: LVSWCQKSTLCTLEACPPISFMS*TSGIPH Trigger: ATGCGGGATGCCAGAAGTGCAAGACATGAAGCTTAT...TGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTTTTGACACCAGCTCACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | AAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCAGGTAGTGTGGATGCTGAAAGAAGAAAAACATCTTaGCGTGAGTCCTCTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KSTLCTLEACPPGSVDAERRKTS*RESSAW Trigger: CCAAGCAGAGGACTCACGTCAAGATGTTTTTCTTCT...TTCAGCATCCACACTACCTGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | GAGAGTAAACTCAATGCATTCCTTCTGAGACCAAAGAGTCTACCACCTGCATGGATTAGTTCCAGCAGCTaGGGTGTCAGAGGTTACTGC | + |
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Preference number: 4 (lower is better) Translates to: ESKLNAFLLRPKSLPPAWISSSS*GVRGYC Trigger: GCAGTAACCTCTGACACCTCAGCTGCTGGAACTAAT...CCATGCAGGTGGTAGACTCTTTGGTCTCAGAAGGAATGCATTGAGTTTACTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR GCA 90 bp | AAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCAGGTAGTGTGGATGCTGAAATGGCTCTTGATTTTTaGAGAACGCATGACGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: KSTLCTLEACPPGSVDAEMALDF*RTHDVW Trigger: CCAGACGTCATGCGTTCTGCAAAAATCAAGAGCCAT...TTCAGCATCCACACTACCTGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | CTTTGTACTCTAGAAGCCTGCCCTCCAGGTAGTGTGGATGCTGAAAAACTATGCTCTGCTTGGAAGTTTTaGTGGCTTCGACTCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LCTLEACPPGSVDAEKLCSAWKF*WLRLWL Trigger: AAGCCAGAGTCGAAGCCACCAAAACTTCCAAGCAGA...GCATAGTTTTTCAGCATCCACACTACCTGGAGGGCAGGCTTCTAGAGTACAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | AGGACTGTAAATAAAACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTAAGAGGGAGCTGTTTGTaGGGGTTTTTCTCTTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: RTVNKTWAATSILDCASLRGSCL*GFFSWS Trigger: CGACCAAGAGAAAAACCCCCACAAACAGCTCCCTCT...TAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGTTTTATTTACAGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | ATACAATCTGAGAGTAAACTCAATGCATTCCTTCTGAGACCAAAGAGTCTACCACTCCTGCAGCATTTCTaGGTAGCGAGCCACCGTGCG | + |
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Preference number: 4 (lower is better) Translates to: IQSESKLNAFLLRPKSLPLLQHF*VASHRA Trigger: CGCACGGTGGCTCGCTACCCAGAAATGCTGCAGGAG...TGGTAGACTCTTTGGTCTCAGAAGGAATGCATTGAGTTTACTCTCAGATTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | CTGGTGAGCTGGTGTCAAAAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCATTCAGTAGCAGGGCATaGCTCTATCTTAGTTTCATT | + |
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Preference number: 4 (lower is better) Translates to: LVSWCQKSTLCTLEACPPFSSRA*LYLSFI Trigger: AATGAAACTAAGATAGAGTCATGCCCTGCTACTGAA...TGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTTTTGACACCAGCTCACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | AAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCAGGTAGTGTGGATGCTGAACGTGCTTGGGATGACTaGATTAAAGTTTCTAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KSTLCTLEACPPGSVDAERAWDD*IKVSSC Trigger: ACAGCTAGAAACTTTAATTCAGTCATCCCAAGCACG...TTCAGCATCCACACTACCTGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | AGGACTGTAAATAAAACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGGGGAGGAAACTTTCTaGACTTGGAGTCCAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: RTVNKTWAATSILDCASLGEETF*TWSPMS Trigger: AGACATTGGACTCCAAGTTCAGAAAGTTTCCTCCCC...TAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGTTTTATTTACAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | GAAGCATTTCTCAATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCTGGGCTGCTGCTGTACTGGCTTaGGTCCTGGGAGCAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: EAFLNNKCKRRTVNKTWAAAVLA*VLGAVL Trigger: CAAGACTGCTCCCAGGACTCAAGCCAGTACAGCAGC...AGCCCAGGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATTGAGAAATGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | ACCACCTGCATGGTGAGGTCTCAGCAAACATTTATTTCATGTCATCTTGACAAGTTTTTACCATGTGGGTaGGTCTGGGTCGCACTTGGG | + |
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Preference number: 4 (lower is better) Translates to: TTCMVRSQQTFISCHLDKFLPCG*VWVALG Trigger: CCCAAGTGCGACCCAGACTCACCCACATGGTAAAAA...CTTGTCAAGATGACATGAAATAAATGTTTGCTGAGACCTCACCATGCAGGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR GCA 90 bp | GAAGCATTTCTCAATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCTGGGCTGGCTCCCTTCCTACTTaGGGCTGCTGTACTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: EAFLNNKCKRRTVNKTWAGSLPT*GCCTGL Trigger: CAAGCCAGTACAGCAGCCGCAAGTAGGAAGGGAGCC...AGCCCAGGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATTGAGAAATGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | AAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCAGGTAGTGTGGATGCTGAATGGGGCAGATATTCTTaGCTTTTAGATAAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KSTLCTLEACPPGSVDAEWGRYS*LLDKAW Trigger: CCAAGCCTTATCTAAAAGCCAAGAATATCTGCCCCA...TTCAGCATCCACACTACCTGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| 3UTR CAA 72 bp | GGAGAGGAATGGACGCAGCAGGCTCTGTCCCCATATTaGTCTTTACTCGAAGCATTTCTCAATAACAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GEEWTQQALSPY*SLLEAFLNNKC Trigger: GCACTTGTTATTGAGAAATGCTTCGAGTAAAGACAAATATGGGGACAGAGCCTGCTGCGTCCATTCCTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | AGAGTCTACCACCTGCATGGTGAGGTCTCAGCAAACATTTATTTCATGTCATCTGTACACCCTCTTCAATaGGCCTCAGACACTCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RVYHLHGEVSANIYFMSSVHPLQ*ASDTLS Trigger: TGACAGAGTGTCTGAGGCTCATTGAAGAGGGTGTAC...AGATGACATGAAATAAATGTTTGCTGAGACCTCACCATGCAGGTGGTAGACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | ACCACCTGCATGGTGAGGTCTCAGCAAACATTTATTTCATGTCATCTTGACAAGGCTTGGAAGTTTTGGTaGCTTCGACTCTGGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TTCMVRSQQTFISCHLDKAWKFW*LRLWLL Trigger: CAGAAGCCAGAGTCGAAGCCACCAAAACTTCCAAGC...CTTGTCAAGATGACATGAAATAAATGTTTGCTGAGACCTCACCATGCAGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR CCA 90 bp | CTTTGTACTCTAGAAGCCTGCCCTCCAGGTAGTGTGGATGCTGAAAAACTATGCGATCCTGTCTCATGTTaGGATGTCTACTGTTATGTC | + |
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Preference number: 4 (lower is better) Translates to: LCTLEACPPGSVDAEKLCDPVSC*DVYCYV Trigger: GACATAACAGTAGACATCCCAACATGAGACAGGATC...GCATAGTTTTTCAGCATCCACACTACCTGGAGGGCAGGCTTCTAGAGTACAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR TCA 90 bp | CTTTGTACTCTAGAAGCCTGCCCTCCAGGTAGTGTGGATGCTGAAAAACTATGCCATTTTCACGGAAGATaGAACACTCTGTTTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LCTLEACPPGSVDAEKLCHFHGR*NTLFCP Trigger: TGGACAAAACAGAGTGTTTCATCTTCCGTGAAAATG...GCATAGTTTTTCAGCATCCACACTACCTGGAGGGCAGGCTTCTAGAGTACAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS-3UTR GCA 90 bp | ACCACCTGCATGGTGAGGTCTCAGCAAACATTTATTTCATGTCATCTTGACAAGTGTATATCAGGGCACTaGCTGGGGTTTCTTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTCMVRSQQTFISCHLDKCISGH*LGFLDS Trigger: ACTGTCAAGAAACCCCAGGCAGTGCCCTGATATACA...CTTGTCAAGATGACATGAAATAAATGTTTGCTGAGACCTCACCATGCAGGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR GCA 90 bp | GAGAGTAAACTCAATGCATTCCTTCTGAGACCAAAGAGTCTACCACCTGCATGGCCATGTGCTTGCTGTTaGTGTTTGGTTTTTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESKLNAFLLRPKSLPPAWPCACC*CLVFSS Trigger: GGAACTAAAAACCAAACAGCAACAGCAAGCACATGG...CCATGCAGGTGGTAGACTCTTTGGTCTCAGAAGGAATGCATTGAGTTTACTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR GCA 90 bp | GAGAGTAAACTCAATGCATTCCTTCTGAGACCAAAGAGTCTACCACCTGCATGGCTTCTTCTCTTTCAATaGTCTTCCAGAAGGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESKLNAFLLRPKSLPPAWLLLFQ*SSRRKC Trigger: ACACTTCCTTCTGGAAGAGCATTGAAAGAGAAGAAG...CCATGCAGGTGGTAGACTCTTTGGTCTCAGAAGGAATGCATTGAGTTTACTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CCA 90 bp | GAGAGTAAACTCAATGCATTCCTTCTGAGACCAAAGAGTCTACCACCTGCATGGCTGGCTGGTTTAGTCTaGAATTTAATGTTGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESKLNAFLLRPKSLPPAWLAGLV*NLMLMG Trigger: ACCCATCAACATTAAATTCCAGACTAAACCAGCCAG...CCATGCAGGTGGTAGACTCTTTGGTCTCAGAAGGAATGCATTGAGTTTACTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CCA 90 bp | ATACAATCTGAGAGTAAACTCAATGCATTCCTTCTGAGACCAAAGAGTCTACCACGTGAGTCCTCTGCTTaGAAGTTTTGGTGGCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: IQSESKLNAFLLRPKSLPRESSA*KFWWLR Trigger: TCGAAGCCACCAAAACTTCCAAGCAGAGGACTCACG...TGGTAGACTCTTTGGTCTCAGAAGGAATGCATTGAGTTTACTCTCAGATTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR TCA 90 bp | ACCACCTGCATGGTGAGGTCTCAGCAAACATTTATTTCATGTCATCTTGACAAGCGAGACTTCACTGCTTaGGTTCTGATTTGTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TTCMVRSQQTFISCHLDKRDFTA*VLICVF Trigger: AAACACACAAATCAGAACTCAAGCAGTGAAGTCTCG...CTTGTCAAGATGACATGAAATAAATGTTTGCTGAGACCTCACCATGCAGGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CCA 90 bp | TTACTCGAAGCATTTCTCAATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCTATCAGGGCACTGCCTaGGGTTTCTTGACAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLEAFLNNKCKRRTVNKTYQGTA*GFLTVL Trigger: CAGGACTGTCAAGAAACCCCAGGCAGTGCCCTGATA...GGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATTGAGAAATGCTTCGAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR GCA 90 bp | TTACTCGAAGCATTTCTCAATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCCTTGGCCAGCTCCTCTaGAGATGTGGTATTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLEAFLNNKCKRRTVNKTLGQLL*RCGISS Trigger: GGAACTAATACCACATCTGCAGAGGAGCTGGCCAAG...GGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATTGAGAAATGCTTCGAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CCA 90 bp | GAGAGTAAACTCAATGCATTCCTTCTGAGACCAAAGAGTCTACCACCTGCATGGTGTAATTTGATACCATaGTTATCCCACTCTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ESKLNAFLLRPKSLPPAWCNLIP*LSHSET Trigger: TGTTTCAGAGTGGGATAACCATGGTATCAAATTACA...CCATGCAGGTGGTAGACTCTTTGGTCTCAGAAGGAATGCATTGAGTTTACTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR GCA 90 bp | TACATGAACCAAAAGCCTTCTCATGGGGATATACAATCTGAGAGTAAACTCAATCCAGTAACTTTGCTTTaGACACCCAGAACTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YMNQKPSHGDIQSESKLNPVTLL*TPRTWQ Trigger: TTGCCAAGTTCTGGGTGTGCAAAGCAAAGTTACTGG...ATTGAGTTTACTCTCAGATTGTATATCCCCATGAGAAGGCTTTTGGTTCATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CCA 90 bp | AGAGTCTACCACCTGCATGGTGAGGTCTCAGCAAACATTTATTTCATGTCATCTCTTGCTGTTGCTGTTTaGTTTTTAGTTCCTGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: RVYHLHGEVSANIYFMSSLAVAV*FLVPVY Trigger: ATATACAGGAACTAAAAACCAAACAGCAACAGCAAG...AGATGACATGAAATAAATGTTTGCTGAGACCTCACCATGCAGGTGGTAGACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CCA 90 bp | GAAGCATTTCTCAATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCTGGGCTTTTGTTTGTTTCATCTaGAAAGCCATCCACAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EAFLNNKCKRRTVNKTWAFVCFI*KAIHRL Trigger: CAACCTGTGGATGGCTTTCCAGATGAAACAAACAAA...AGCCCAGGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATTGAGAAATGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR TCA 90 bp | TTACTCGAAGCATTTCTCAATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCAGCAGTCTGAGTAACTaGACTTTTGCTCAAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLEAFLNNKCKRRTVNKTSSLSN*TFAQDL Trigger: CAGATCTTGAGCAAAAGTTCAGTTACTCAGACTGCT...GGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATTGAGAAATGCTTCGAGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR TCA 90 bp | GAAGCATTTCTCAATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCTGGGCTGGTCATTGGTTTCTTTaGTGTCTGAGTCTTATTATG | + |
|
Preference number: 4 (lower is better) Translates to: EAFLNNKCKRRTVNKTWAGHWFL*CLSLIM Trigger: CATAATAAGACTCAGACATCAAAGAAACCAATGACC...AGCCCAGGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATTGAGAAATGCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR GCA 90 bp | TTACTCGAAGCATTTCTCAATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCCATCAAAGGTGCCTTTaGTTGCCAGTAACTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLEAFLNNKCKRRTVNKTHQRCL*LPVTLL Trigger: AAGCAAAGTTACTGGCAAGCAAAGGCACCTTTGATG...GGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATTGAGAAATGCTTCGAGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CCA 90 bp | GAAGCATTTCTCAATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCTGGGCTATATTTAGATGGTGGTaGTTTGGGGCAGATATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EAFLNNKCKRRTVNKTWAIFRWW*FGADIL Trigger: AAGAATATCTGCCCCAAACCACCACCATCTAAATAT...AGCCCAGGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATTGAGAAATGCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CCA 90 bp | TACATGAACCAAAAGCCTTCTCATGGGGATATACAATCTGAGAGTAAACTCAATTGTCCTGTGTGTTCTTaGTCATTGGTTTCTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: YMNQKPSHGDIQSESKLNCPVCS*SLVSLM Trigger: CATCAAAGAAACCAATGACCAAGAACACACAGGACA...ATTGAGTTTACTCTCAGATTGTATATCCCCATGAGAAGGCTTTTGGTTCATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS GCA 90 bp | GGGTCCTTTAGCTTTCCCTTGGCTGCCAGGTACTCCTGGAGCTTCTaGCACCGTTCTTCCGCGGCTGCGCTGGCAGTGGGGCCGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSFSFPLAARYSWSF*HRSSAAALAVGPGP Trigger: GGGGCCCGGCCCCACTGCCAGCGCAGCCGCGGAAGAACGGTGGCAGAAGCTCCAGGAGTACCTGGCAGCCAAGGGAAAGCTAAAGGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS CCA 90 bp | TTGGCGTTGGGGTCCTTTAGCTTTCCCTTGGCTGCCAGGTACTCCTaGAGCTTCTGCCACCGTTCTTCCGCGGCTGCGCTGGCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LALGSFSFPLAARYS*SFCHRSSAAALAVG Trigger: CCCCACTGCCAGCGCAGCCGCGGAAGAACGGTGGCAGAAGCTCCAGGAGTACCTGGCAGCCAAGGGAAAGCTAAAGGACCCCAACGCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS GCA 90 bp | TCGATCCTGGCTGAGCGCCTCACGGGAGTGATAAGCTTCATGTCTTaGACTTCTGGCATCCCGCATATTCTAGGGATCGGAGCAACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SILAERLTGVISFMS*TSGIPHILGIGATC Trigger: ACAGGTTGCTCCGATCCCTAGAATATGCGGGATGCCAGAAGTGCAAGACATGAAGCTTATCACTCCCGTGAGGCGCTCAGCCAGGATCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGCCACCCAGCCAGTAACTTTGCTTaGCACACCCAGAACTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TWAATSILDCASLEESHPASNFA*HTQNLA Trigger: TGCCAAGTTCTGGGTGTGCAAAGCAAAGTTACTGGC...TGGGTGGCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS GCA 90 bp | AGAGGGAGCTGTTTGTGGGGGTTTTTCTCTTGGTCGTGTAGAATCTaGAACTGTAGGGCGTGGCCGAGACTTCACTGCTTGAGTTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RGSCLWGFFSWSCRI*NCRAWPRLHCLSSD Trigger: ATCAGAACTCAAGCAGTGAAGTCTCGGCCACGCCCTACAGTTGCAGATTCTACACGACCAAGAGAAAAACCCCCACAAACAGCTCCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | GACTGTGCTTCACTAGAGGAAAGCCACCCAGAGAGGACAAGCGTCCCCCTCATCATGAAACACTCTGTTTaGTCCACTTCCAGTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DCASLEESHPERTSVPLIMKHSV*STSSSS Trigger: TGAGCTACTGGAAGTGGACAAAACAGAGTGTTTCAT...GATGAGGGGGACGCTTGTCCTCTCTGGGTGGCTTTCCTCTAGTGAAGCACAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS TCA 90 bp | ACGTTCAGAACTTCCTGCAGCTCCTGTACTGGTGTTGCCCCGTTCTaGATGGCCTCTTCGTATAGTCCAATAGCATCAAAGGTGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TFRTSCSSCTGVAPF*MASSYSPIASKVPL Trigger: CAAAGGCACCTTTGATGCTATTGGACTATACGAAGAGGCCATTCAGAACGGGGCAACACCAGTACAGGAGCTGCAGGAAGTTCTGAACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS CCA 90 bp | ATCCCGCATATTCTAGGGATCGGAGCAACCTGTAATTTGATACCATaGTTATCCCACTCTGAAACAGGTATCCGCGGTGCTGCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IPHILGIGATCNLIP*LSHSETGIRGAAAA Trigger: TGCAGCAGCAGCACCGCGGATACCTGTTTCAGAGTGGGATAACCATGGTATCAAATTACAGGTTGCTCCGATCCCTAGAATATGCGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | CTTTGTACTCTAGAAGCCTGCCCTCCAGGTAGTGTGGATGCTGAAAAACTATGCAAAGCCATCCACAGGTaGCTTTGCAGCGTGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LCTLEACPPGSVDAEKLCKAIHR*LCSVGV Trigger: AACACCCACGCTGCAAAGCAACCTGTGGATGGCTTT...GCATAGTTTTTCAGCATCCACACTACCTGGAGGGCAGGCTTCTAGAGTACAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGCTGGTGTCAAAAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCACAAAGGTGCCTTTGCTaGCCAGTAACTTTGCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVSWCQKSTLCTLEACPPQRCLC*PVTLLC Trigger: GCAAAGCAAAGTTACTGGCAAGCAAAGGCACCTTTG...TGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTTTTGACACCAGCTCACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | AGGACTGTAAATAAAACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTATGCTCAGATTCCTCCTaGGCCAGCTCCTCTGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RTVNKTWAATSILDCASLCSDSS*ASSSAD Trigger: ATCTGCAGAGGAGCTGGCCAAGGAGGAATCTGAGCA...TAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGTTTTATTTACAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | GGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGCCACCCAGAGAGGCTTGCTGTTGCTGTTaGGTTTTTAGTTCCTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: GCHLNSGLCFTRGKPPREACCCC*VFSSCI Trigger: TATACAGGAACTAAAAACCAAACAGCAACAGCAAGC...CTCTCTGGGTGGCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGAGGAAAGCCACCCAATGTCCTGTGTGTTCTaGGTCATTGGTTTCTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TWAATSILDCASLEESHPMSCVF*VIGFFD Trigger: ATCAAAGAAACCAATGACCAAGAACACACAGGACAT...TGGGTGGCTTTCCTCTAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS GCA 90 bp | GTCTCGGGATGTGTACATTTAGCATTTCCTCCATGTGCTTGCTGTTaGTGTTTGGTTTTTAGTTCCTGTATATCAGGGCACTGCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VSGCVHLAFPPCACC*CLVFSSCISGHCLG Trigger: CCCCAGGCAGTGCCCTGATATACAGGAACTAAAAACCAAACAGCAACAGCAAGCACATGGAGGAAATGCTAAATGTACACATCCCGAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS CCA 90 bp | GTGAGTCCTCTGCTTGGAAGTTTTGGTGGCTTCGACTCTGGCTTCTaGGATGCTGTGATACTGGCTGGTTTAGTCTGGAATTTAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSPLLGSFGGFDSGF*DAVILAGLVWNLML Trigger: CAACATTAAATTCCAGACTAAACCAGCCAGTATCACAGCATCCCAGAAGCCAGAGTCGAAGCCACCAAAACTTCCAAGCAGAGGACTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS CCA 90 bp | TGGGGGTTTTTCTCTTGGTCGTGTAGAATCTGCAACTGTAGGGCGTaGCCGAGACTTCACTGCTTGAGTTCTGATTTGTGTGTTTCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: WGFFSWSCRICNCRA*PRLHCLSSDLCVSN Trigger: ATTCGAAACACACAAATCAGAACTCAAGCAGTGAAGTCTCGGCCACGCCCTACAGTTGCAGATTCTACACGACCAAGAGAAAAACCCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | AAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCAGGTAGTGTGGATGCTGAATTGCACACCCAGAACTaGGCAAATTTTTCAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KSTLCTLEACPPGSVDAELHTQN*ANFSAS Trigger: TGAGGCTGAAAAATTTGCCAAGTTCTGGGTGTGCAA...TTCAGCATCCACACTACCTGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | AAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCAGGTAGTGTGGATGCTGAAGGAGCAACCTGTAATTaGATACCATGGTTATCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KSTLCTLEACPPGSVDAEGATCN*IPWLSH Trigger: GTGGGATAACCATGGTATCAAATTACAGGTTGCTCC...TTCAGCATCCACACTACCTGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGCTGGTGTCAAAAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCACAGACCTTTCTGAGTTaGATTAGAAGAGCCAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: LVSWCQKSTLCTLEACPPQTFLS*IRRASI Trigger: AATACTGGCTCTTCTAATCAAACTCAGAAAGGTCTG...TGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTTTTGACACCAGCTCACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGCTGGTGTCAAAAGTCAACCCTTTGTACTCTAGAAGCCTGCCCTCCATGCTTGAGTTCTGATTaGTGTGTTTCGAATGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: LVSWCQKSTLCTLEACPPCLSSD*CVSNEL Trigger: CAGTTCATTCGAAACACACAAATCAGAACTCAAGCA...TGGAGGGCAGGCTTCTAGAGTACAAAGGGTTGACTTTTGACACCAGCTCACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | GAGAGTAAACTCAATGCATTCCTTCTGAGACCAAAGAGTCTACCACCTGCATGGGCATCAAAGGTGCCTTaGCTTGCCAGTAACTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESKLNAFLLRPKSLPPAWASKVP*LASNFA Trigger: AGCAAAGTTACTGGCAAGCAAAGGCACCTTTGATGC...CCATGCAGGTGGTAGACTCTTTGGTCTCAGAAGGAATGCATTGAGTTTACTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS CCA 90 bp | TTGTTTGTTTCATCTGGAAAGCCATCCACAGGTTGCTTTGCAGCGTaGGTGTTAGTCTCGGGATGTGTACATTTAGCATTTCCTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LFVSSGKPSTGCFAA*VLVSGCVHLAFPPC Trigger: ACATGGAGGAAATGCTAAATGTACACATCCCGAGACTAACACCCACGCTGCAAAGCAACCTGTGGATGGCTTTCCAGATGAAACAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | AGGACTGTAAATAAAACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTACCGAGACTTCACTGCTaGAGTTCTGATTTGTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RTVNKTWAATSILDCASLPRLHC*SSDLCV Trigger: AACACACAAATCAGAACTCAAGCAGTGAAGTCTCGG...TAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGTTTTATTTACAGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | AGAGTCTACCACCTGCATGGTGAGGTCTCAGCAAACATTTATTTCATGTCATCTGATAAGCTTCATGTCTaGCACTTCTGGCATCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RVYHLHGEVSANIYFMSSDKLHV*HFWHPA Trigger: TGCGGGATGCCAGAAGTGCAAGACATGAAGCTTATC...AGATGACATGAAATAAATGTTTGCTGAGACCTCACCATGCAGGTGGTAGACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | TTACTCGAAGCATTTCTCAATAACAAGTGCAAAAGGAGGACTGTAAATAAAACCTCCTTTAGCTTTCCCTaGGCTGCCAGGTACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLEAFLNNKCKRRTVNKTSFSFP*AARYSW Trigger: CCAGGAGTACCTGGCAGCCAAGGGAAAGCTAAAGGA...GGTTTTATTTACAGTCCTCCTTTTGCACTTGTTATTGAGAAATGCTTCGAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS-3UTR CAA 90 bp | AGGACTGTAAATAAAACCTGGGCTGCCACCTCAATTCTGGACTGTGCTTCACTAGCAAGTTTTCTTTGTTaGTTTCATCTGGAAAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RTVNKTWAATSILDCASLASFLC*FHLESH Trigger: ATGGCTTTCCAGATGAAACAAACAAAGAAAACTTGC...TAGTGAAGCACAGTCCAGAATTGAGGTGGCAGCCCAGGTTTTATTTACAGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS TCA 90 bp | GTTAAGTGTTTTATTTGCTCTCATGTTAGGCGTGCTTGGGATGACTaGATTAAAGTTTCTAGCTGTCAAATTAGGCCTCTGGCTTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VKCFICSHVRRAWDD*IKVSSCQIRPLAYG Trigger: GCCATAAGCCAGAGGCCTAATTTGACAGCTAGAAACTTTAATTCAGTCATCCCAAGCACGCCTAACATGAGAGCAAATAAAACACTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
||
| CDS TCA 90 bp | GGAACTAGGTTTAGTGTGTTTTACTTTCTGTTCAGTAGCAGGGCATaGCTCTATCTTAGTTTCATTTGGTTTTCCGTATCTAACCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GTRFSVFYFLFSSRA*LYLSFIWFSVSNPV Trigger: AACAGGGTTAGATACGGAAAACCAAATGAAACTAAGATAGAGTCATGCCCTGCTACTGAACAGAAAGTAAAACACACTAAACCTAGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS TCA 72 bp | TTCTGGGTAGCGAGCCACCGTGCGCTCGATCCTGGCTaGGCGCCTCACGGGAGTGATAAGCTTCATGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: FWVASHRALDPG*APHGSDKLHVL Trigger: CAAGACATGAAGCTTATCACTCCCGTGAGGCGCTCAGCCAGGATCGAGCGCACGGTGGCTCGCTACCCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS GCA 72 bp | GCTGAGCGCCTCACGGGAGTGATAAGCTTCATGTCTTaGACTTCTGGCATCCCGCATATTCTAGGGATCGGA | + |
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Preference number: 6 (lower is better) Translates to: AERLTGVISFMS*TSGIPHILGIG Trigger: TCCGATCCCTAGAATATGCGGGATGCCAGAAGTGCAAGACATGAAGCTTATCACTCCCGTGAGGCGCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CCA 72 bp | GGAATGAGAGGGAGCTGTTTGTGGGGGTTTTTCTCTTaGTCGTGTAGAATCTGCAACTGTAGGGCGTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: GMRGSCLWGFFS*SCRICNCRAWP Trigger: CGGCCACGCCCTACAGTTGCAGATTCTACACGACCAAGAGAAAAACCCCCACAAACAGCTCCCTCTCATTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CAA 90 bp | GGCTCCATTTCTGTTAGAGATGGGCAAGGCTGCTCAGATTCCTCCTaGGCCAGCTCCTCTGCAGATGTGGTATTAGTTCCAGCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: GSISVRDGQGCSDSS*ASSSADVVLVPAAE Trigger: CTCAGCTGCTGGAACTAATACCACATCTGCAGAGGAGCTGGCCAAGGAGGAATCTGAGCAGCCTTGCCCATCTCTAACAGAAATGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS TCA 72 bp | CAGCTCCTCTGCAGATGTGGTATTAGTTCCAGCAGCTaGGGTGTCAGAGGTTACTGCTTCTGTGCTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: QLLCRCGISSSS*GVRGYCFCAPA Trigger: TGCAGGAGCACAGAAGCAGTAACCTCTGACACCTCAGCTGCTGGAACTAATACCACATCTGCAGAGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS GCA 72 bp | CAGCTGAGGTGTCAGAGGTTACTGCTTCTGTGCTCCTaGATGGGTCTTGTAGAACGTTCAGAACTTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: QLRCQRLLLLCS*MGLVERSELPA Trigger: TGCAGGAAGTTCTGAACGTTCTACAAGACCCATGCAGGAGCACAGAAGCAGTAACCTCTGACACCTCAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CCA 72 bp | GAGTCCTCTGCTTGGAAGTTTTGGTGGCTTCGACTCTaGCTTCTGGGATGCTGTGATACTGGCTGGTTTAGT | + |
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Preference number: 6 (lower is better) Translates to: ESSAWKFWWLRL*LLGCCDTGWFS Trigger: ACTAAACCAGCCAGTATCACAGCATCCCAGAAGCCAGAGTCGAAGCCACCAAAACTTCCAAGCAGAGGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CAA 72 bp | GAACGTTCAGAACTTCCTGCAGCTCCTGTACTGGTGTaGCCCCGTTCTGAATGGCCTCTTCGTATAGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: ERSELPAAPVLV*PRSEWPLRIVQ Trigger: TTGGACTATACGAAGAGGCCATTCAGAACGGGGCAACACCAGTACAGGAGCTGCAGGAAGTTCTGAACGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS TCA 72 bp | ACTTCCTGCAGCTCCTGTACTGGTGTTGCCCCGTTCTaGATGGCCTCTTCGTATAGTCCAATAGCATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: TSCSSCTGVAPF*MASSYSPIASK Trigger: CTTTGATGCTATTGGACTATACGAAGAGGCCATTCAGAACGGGGCAACACCAGTACAGGAGCTGCAGGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS GCA 72 bp | TTCCAGCAGCTGAGGTGTCAGAGGTTACTGCTTCTGTaGTCCTGCATGGGTCTTGTAGAACGTTCAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: FQQLRCQRLLLL*SCMGLVERSEL Trigger: AAGTTCTGAACGTTCTACAAGACCCATGCAGGAGCACAGAAGCAGTAACCTCTGACACCTCAGCTGCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CCA 72 bp | TTCTCTTGGTCGTGTAGAATCTGCAACTGTAGGGCGTaGCCGAGACTTCACTGCTTGAGTTCTGATTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: FSWSCRICNCRA*PRLHCLSSDLC Trigger: ACACAAATCAGAACTCAAGCAGTGAAGTCTCGGCCACGCCCTACAGTTGCAGATTCTACACGACCAAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CCA 72 bp | GATGAGGCTGTACAGGCTTCTGATCCTGTCTCATGTTaGGATGTCTACTGTTATGTCCTCCCTGAAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: DEAVQASDPVSC*DVYCYVLPEAH Trigger: ATGTGCTTCAGGGAGGACATAACAGTAGACATCCCAACATGAGACAGGATCAGAAGCCTGTACAGCCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS TCA 72 bp | TCTGCAACTGTAGGGCGTGGCCGAGACTTCACTGCTTaGGTTCTGATTTGTGTGTTTCGAATGAACTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SATVGRGRDFTA*VLICVFRMNCL Trigger: CAAACAGTTCATTCGAAACACACAAATCAGAACTCAAGCAGTGAAGTCTCGGCCACGCCCTACAGTTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS GCA 72 bp | TGCTGTTTGGTTTTTAGTTCCTGTATATCAGGGCACTaGCTGGGGTTTCTTGACAGTCCTGCAGTGAATGAC | + |
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Preference number: 6 (lower is better) Translates to: CCLVFSSCISGH*LGFLDSPAVND Trigger: GTCATTCACTGCAGGACTGTCAAGAAACCCCAGGCAGTGCCCTGATATACAGGAACTAAAAACCAAACAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS GCA 72 bp | GTTTGTTTCATCTGGAAAGCCATCCACAGGTTGCTTTaGAGCGTGGGTGTTAGTCTCGGGATGTGTACATTT | + |
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Preference number: 6 (lower is better) Translates to: VCFIWKAIHRLL*SVGVSLGMCTF Trigger: AAATGTACACATCCCGAGACTAACACCCACGCTGCAAAGCAACCTGTGGATGGCTTTCCAGATGAAACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS GCA 72 bp | AGAATCTGCAACTGTAGGGCGTGGCCGAGACTTCACTaGTTGAGTTCTGATTTGTGTGTTTCGAATGAACTG | + |
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Preference number: 6 (lower is better) Translates to: RICNCRAWPRLH*LSSDLCVSNEL Trigger: CAGTTCATTCGAAACACACAAATCAGAACTCAAGCAGTGAAGTCTCGGCCACGCCCTACAGTTGCAGATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CCA 72 bp | TCATCTGGAAAGCCATCCACAGGTTGCTTTGCAGCGTaGGTGTTAGTCTCGGGATGTGTACATTTAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: SSGKPSTGCFAA*VLVSGCVHLAF Trigger: AAATGCTAAATGTACACATCCCGAGACTAACACCCACGCTGCAAAGCAACCTGTGGATGGCTTTCCAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CCA 72 bp | ATTCTAGGGATCGGAGCAACCTGTAATTTGATACCATaGTTATCCCACTCTGAAACAGGTATCCGCGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ILGIGATCNLIP*LSHSETGIRGA Trigger: AGCACCGCGGATACCTGTTTCAGAGTGGGATAACCATGGTATCAAATTACAGGTTGCTCCGATCCCTAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CAA 72 bp | AGGGCGTGGCCGAGACTTCACTGCTTGAGTTCTGATTaGTGTGTTTCGAATGAACTGTTTGTTAGCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RAWPRLHCLSSD*CVSNELFVSSV Trigger: GACAGAGCTAACAAACAGTTCATTCGAAACACACAAATCAGAACTCAAGCAGTGAAGTCTCGGCCACGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CAA 90 bp | GTCACAGGCAAAGCCTCATTTTCACGGAAGATGAAACACTCTGTTTaGTCCACTTCCAGTAGCTCATTAAGAGAAGCCACCACCACATCA | + |
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Preference number: 6 (lower is better) Translates to: VTGKASFSRKMKHSV*STSSSSLREATTTS Trigger: TGATGTGGTGGTGGCTTCTCTTAATGAGCTACTGGAAGTGGACAAAACAGAGTGTTTCATCTTCCGTGAAAATGAGGCTTTGCCTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS TCA 72 bp | CCAGTGTCACAGGCAAAGCCTCATTTTCACGGAAGATaGAACACTCTGTTTTGTCCACTTCCAGTAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PVSQAKPHFHGR*NTLFCPLPVAH Trigger: ATGAGCTACTGGAAGTGGACAAAACAGAGTGTTTCATCTTCCGTGAAAATGAGGCTTTGCCTGTGACACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CAA 72 bp | ATCTGCAACTGTAGGGCGTGGCCGAGACTTCACTGCTaGAGTTCTGATTTGTGTGTTTCGAATGAACTGTTT | + |
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Preference number: 6 (lower is better) Translates to: ICNCRAWPRLHC*SSDLCVSNELF Trigger: AAACAGTTCATTCGAAACACACAAATCAGAACTCAAGCAGTGAAGTCTCGGCCACGCCCTACAGTTGCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CAA 72 bp | GCATCAAAGGTGCCTTTGCTTGCCAGTAACTTTGCTTaGCACACCCAGAACTTGGCAAATTTTTCAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ASKVPLLASNFA*HTQNLANFSAS Trigger: TGAGGCTGAAAAATTTGCCAAGTTCTGGGTGTGCAAAGCAAAGTTACTGGCAAGCAAAGGCACCTTTGATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS TCA 72 bp | TGTCTCATGTTGGGATGTCTACTGTTATGTCCTCCCTaGAGCACATTGAGTTGGGAACTAGGTTTAGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: CLMLGCLLLCPP*STLSWELGLVC Trigger: ACACACTAAACCTAGTTCCCAACTCAATGTGCTTCAGGGAGGACATAACAGTAGACATCCCAACATGAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CAA 72 bp | ATCCCGCATATTCTAGGGATCGGAGCAACCTGTAATTaGATACCATGGTTATCCCACTCTGAAACAGGTATC | + |
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Preference number: 6 (lower is better) Translates to: IPHILGIGATCN*IPWLSHSETGI Trigger: GATACCTGTTTCAGAGTGGGATAACCATGGTATCAAATTACAGGTTGCTCCGATCCCTAGAATATGCGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS TCA 72 bp | CGTTATGTCCTGTGTGTTCTTGGTCATTGGTTTCTTTaGTGTCTGAGTCTTATTATGGGCTGGAACGGAATG | + |
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Preference number: 6 (lower is better) Translates to: RYVLCVLGHWFL*CLSLIMGWNGM Trigger: CATTCCGTTCCAGCCCATAATAAGACTCAGACATCAAAGAAACCAATGACCAAGAACACACAGGACATAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CAA 72 bp | CCGTTATGTCCTGTGTGTTCTTGGTCATTGGTTTCTTaGATGTCTGAGTCTTATTATGGGCTGGAACGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PLCPVCSWSLVS*MSESYYGLERN Trigger: ATTCCGTTCCAGCCCATAATAAGACTCAGACATCAAAGAAACCAATGACCAAGAACACACAGGACATAACGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CAA 72 bp | AAAGCCTCATTTTCACGGAAGATGAAACACTCTGTTTaGTCCACTTCCAGTAGCTCATTAAGAGAAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: KASFSRKMKHSV*STSSSSLREAT Trigger: GGTGGCTTCTCTTAATGAGCTACTGGAAGTGGACAAAACAGAGTGTTTCATCTTCCGTGAAAATGAGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS GCA 72 bp | TGTGTACATTTAGCATTTCCTCCATGTGCTTGCTGTTaGTGTTTGGTTTTTAGTTCCTGTATATCAGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: CVHLAFPPCACC*CLVFSSCISGH Trigger: GTGCCCTGATATACAGGAACTAAAAACCAAACAGCAACAGCAAGCACATGGAGGAAATGCTAAATGTACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS GCA 72 bp | TCGGGATGTGTACATTTAGCATTTCCTCCATGTGCTTaGTGTTGCTGTTTGGTTTTTAGTTCCTGTATATCA | + |
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Preference number: 6 (lower is better) Translates to: SGCVHLAFPPCA*CCCLVFSSCIS Trigger: TGATATACAGGAACTAAAAACCAAACAGCAACAGCAAGCACATGGAGGAAATGCTAAATGTACACATCCCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CAA 72 bp | GCTCAAGATCTGTTTAGGAGCCAGACCTTTCTGAGTTaGATTAGAAGAGCCAGTATTTGGCTTTCTTATAGA | + |
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Preference number: 6 (lower is better) Translates to: AQDLFRSQTFLS*IRRASIWLSYR Trigger: TCTATAAGAAAGCCAAATACTGGCTCTTCTAATCAAACTCAGAAAGGTCTGGCTCCTAAACAGATCTTGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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| CDS CAA 72 bp | ATGTCTACTGTTATGTCCTCCCTGAAGCACATTGAGTaGGGAACTAGGTTTAGTGTGTTTTACTTTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: MSTVMSSLKHIE*GTRFSVFYFLF Trigger: GAACAGAAAGTAAAACACACTAAACCTAGTTCCCAACTCAATGTGCTTCAGGGAGGACATAACAGTAGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052708.7 |
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