Pregenerated sensors for CITED2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039910Ensembl transcript IDs: ENSMUST00000038107.9, ENSMUST00000219558.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGAGGGGAGACAGCCAACTTGAAAGTGAACGGTATGACTTTTCCTaGTCCAGAACGGTTTGGCCCACATGTTTAATCTTCCAGTTTAGC | + |
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Preference number: 1 (lower is better) Translates to: GRGDSQLESERYDFS*SRTVWPTCLIFQFS Trigger: GCTAAACTGGAAGATTAAACATGTGGGCCAAACCGTTCTGGATCAGGAAAAGTCATACCGTTCACTTTCAAGTTGGCTGTCTCCCCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| 3UTR GCA 90 bp | AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATaGAGCCAACAAATGCAATGTTTCCTTTCACTCATGAATCTGAAC | + |
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Preference number: 1 (lower is better) Translates to: SEMAVCAVISALQRS*SQQMQCFLSLMNLN Trigger: GTTCAGATTCATGAGTGAAAGGAAACATTGCATTTGTTGGCTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGTGGGGTGGGGAGGGTaGTTTCTTTCCGCCTGCGAG | + |
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Preference number: 2 (lower is better) Translates to: FPGSQPFQDLKSEILRLRVGWGG*FLSACE Trigger: CTCGCAGGCGGAAAGAAATCACCCTCCCCACCCCAC...CCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGGTGGGGTGGGGAGGGTaGTTTCTTTCCGCCTGCGAG | + |
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Preference number: 2 (lower is better) Translates to: MKRDGSLCSNICPSKIMQVGWGG*FLSACE Trigger: CTCGCAGGCGGAAAGAAATCACCCTCCCCACCCCAC...CTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCCACGCAGCGCAGTCATTTaGAACCATCTACAAAATCCA | + |
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Preference number: 2 (lower is better) Translates to: KRDGSLCSNICPSKIMQPRSAVI*NHLQNP Trigger: TGGATTTTGTAGATGGTTTCAAATGACTGCGCTGCG...TGGCTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCCATTAATATCTAACAGTTaGGCACGGGAGAAAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: KRDGSLCSNICPSKIMQPLISNS*AREKVR Trigger: CCTCACTTTCTCCCGTGCTCAACTGTTAGATATTAA...TGGCTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATGTTTGCCACTGACGACATTCCACACCCTATTATTGTCTGTACATATGGGTTAATATCTAACAGTTaGGCACGGGAGAAAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: EMFATDDIPHPIIVCTYGLISNS*AREKVR Trigger: CCTCACTTTCTCCCGTGCTCAACTGTTAGATATTAA...CCCATATGTACAGACAATAATAGGGTGTGGAATGTCGTCAGTGGCAAACATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| 3UTR-3UTR CAA 90 bp | AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCCAAACGCAGCGCAGTCATTaGAAACCATCTACAAAATCC | + |
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Preference number: 3 (lower is better) Translates to: SEMAVCAVISALQRSCSQTQRSH*KPSTKS Trigger: GGATTTTGTAGATGGTTTCAAATGACTGCGCTGCGT...TTGGCTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| 3UTR-3UTR CAA 90 bp | GAAATGTTTGCCACTGACGACATTCCACACCCTATTATTGTCTGTACATATGGGGGGGAGACAGCCAACTaGAAAGTGAACGGTATGACT | + |
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Preference number: 3 (lower is better) Translates to: EMFATDDIPHPIIVCTYGGETAN*KVNGMT Trigger: AGTCATACCGTTCACTTTCAAGTTGGCTGTCTCCCC...CCCATATGTACAGACAATAATAGGGTGTGGAATGTCGTCAGTGGCAAACATTTC 46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| 3UTR TCA 72 bp | GACAGCCAACTTGAAAGTGAACGGTATGACTTTTCCTaGTCCAGAACGGTTTGGCCCACATGTTTAATCTTC | + |
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Preference number: 3 (lower is better) Translates to: DSQLESERYDFS*SRTVWPTCLIF Trigger: GAAGATTAAACATGTGGGCCAAACCGTTCTGGATCAGGAAAAGTCATACCGTTCACTTTCAAGTTGGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| 3UTR-3UTR CAA 90 bp | GAAATGTTTGCCACTGACGACATTCCACACCCTATTATTGTCTGTACATATGGGACGCAGCGCAGTCATTaGAAACCATCTACAAAATCC | + |
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Preference number: 3 (lower is better) Translates to: EMFATDDIPHPIIVCTYGTQRSH*KPSTKS Trigger: GGATTTTGTAGATGGTTTCAAATGACTGCGCTGCGT...CCCATATGTACAGACAATAATAGGGTGTGGAATGTCGTCAGTGGCAAACATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | CCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAACCCGGCCCCATGGCGTaGCTGATGCCGCTCGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PGSQPFQDLKSEILRLREPGPMA*LMPLVA Trigger: TGCCACGAGCGGCATCAGGCACGCCATGGGGCCGGG...TTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAACGGTGGGCAGGGTGGTaGTGCAGCCCGTTGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: PGSQPFQDLKSEILRLRERWAGW*CSPLVP Trigger: CGGCACCAACGGGCTGCACCACCACCCTGCCCACCG...TTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR TCA 90 bp | TATTATTGTCTGTACATATGGGGGAGGGGAGACAGCCAACTTGAAAGTGAACGGATTGCCGCGGGGACGTaGGCCACCGAGGCGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: YYCLYIWGRGDSQLESERIAAGT*ATEAGM Trigger: CATGCCCGCCTCGGTGGCTCACGTCCCCGCGGCAAT...CCGTTCACTTTCAAGTTGGCTGTCTCCCCTCCCCCATATGTACAGACAATAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | TATTATTGTCTGTACATATGGGGGAGGGGAGACAGCCAACTTGAAAGTGAACGGGGTGCAGCCCGTTGGTaGCGTCGGGGAAGCGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: YYCLYIWGRGDSQLESERGAARW*RRGSAR Trigger: ACGGGCGCTTCCCCGACGGCACCAACGGGCTGCACC...CCGTTCACTTTCAAGTTGGCTGTCTCCCCTCCCCCATATGTACAGACAATAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAACCCATGCCCATGCGGTaGGCAGGGTGGTGGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PGSQPFQDLKSEILRLREPMPMR*AGWWCS Trigger: GCTGCACCACCACCCTGCCCACCGCATGGGCATGGG...TTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | ATGAAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGTGGGCAGGGTGGTGGTaGAGCCCGTTGGTGCCGTCG | + |
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Preference number: 4 (lower is better) Translates to: MKRDGSLCSNICPSKIMQWAGWW*SPLVPS Trigger: CGACGGCACCAACGGGCTGCACCACCACCCTGCCCA...CTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | TCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAATGTTTGTTCCCGGCCCCATGGCGTaGCTGATGCCGCTCGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: STLSGSEKRDTASKGMFVPGPMA*LMPLVA Trigger: TGCCACGAGCGGCATCAGGCACGCCATGGGGCCGGG...AACAAACATTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCCAAGCTTCTGCAGCTGCATaGTGGCCGGCAGGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SEMAVCAVISALQRSCSQASAAA*WPAGSL Trigger: GAGGCTCCCTGCCGGCCAGCATGCAGCTGCAGAAGC...TTGGCTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | TCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAATGTTTGTTCCGCACCGCCAGGGGTaGTGCTGCCTCCGCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: STLSGSEKRDTASKGMFVPHRQG*CCLRCA Trigger: AGCACAGCGGAGGCAGCAGCACCCCTGGCGGTGCGG...AACAAACATTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CCA 90 bp | ATCATGCAGCCAACAAATGCAATGTTTCCTTTCACTCATGAATCTGAACGCAGCGGTGGTGCAGCCCGTTaGTGCCGTCGGGGAAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: IMQPTNAMFPFTHESERSGGAAR*CRRGSA Trigger: GGCGCTTCCCCGACGGCACCAACGGGCTGCACCACC...GCTGCGTTCAGATTCATGAGTGAAAGGAAACATTGCATTTGTTGGCTGCATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CCA 90 bp | TCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAATGTTTGTTCGGTGGGCAGGGTGGTaGTGCAGCCCGTTGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: STLSGSEKRDTASKGMFVRWAGW*CSPLVP Trigger: CGGCACCAACGGGCTGCACCACCACCCTGCCCACCG...AACAAACATTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CCA 90 bp | TTTCCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGTCTGCAGCTGCATGCTaGCCGGCAGGGAGCCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: FPGSQPFQDLKSEILRLRSAAAC*PAGSLP Trigger: AGGGAGGCTCCCTGCCGGCCAGCATGCAGCTGCAGA...CCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR TCA 90 bp | ACGCAGCGCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGATTGCCGCGGGGACGTaGGCCACCGAGGCGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: TQRSHLKPSTKSTRLSSLIAAGT*ATEAGM Trigger: CATGCCCGCCTCGGTGGCTCACGTCCCCGCGGCAAT...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGCGCTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | ACGCAGCGCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGGGTGCAGCCCGTTGGTaGCGTCGGGGAAGCGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: TQRSHLKPSTKSTRLSSLGAARW*RRGSAR Trigger: ACGGGCGCTTCCCCGACGGCACCAACGGGCTGCACC...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGCGCTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | TCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAATGTTTGTTTGCGGGCTCGGGAACTaGCCCATGCCCATGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: STLSGSEKRDTASKGMFVCGLGN*PMPMRW Trigger: CCACCGCATGGGCATGGGGCAGTTCCCGAGCCCGCA...AACAAACATTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | CCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAATTGAGCTTCTGCAGCTaGATGCTGGCCGGCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PGSQPFQDLKSEILRLRELSFCS*MLAGRE Trigger: CTCCCTGCCGGCCAGCATGCAGCTGCAGAAGCTCAA...TTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CCA 90 bp | ATGAAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGTCTGCAGCTGCATGCTaGCCGGCAGGGAGCCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: MKRDGSLCSNICPSKIMQSAAAC*PAGSLP Trigger: AGGGAGGCTCCCTGCCGGCCAGCATGCAGCTGCAGA...CTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | ATCATGCAGCCAACAAATGCAATGTTTCCTTTCACTCATGAATCTGAACGCAGCTCGGGAACTGCCCCATaGCCATGCGGTGGGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: IMQPTNAMFPFTHESERSSGTAP*PCGGQG Trigger: ACCCTGCCCACCGCATGGGCATGGGGCAGTTCCCGA...GCTGCGTTCAGATTCATGAGTGAAAGGAAACATTGCATTTGTTGGCTGCATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | ATCATGCAGCCAACAAATGCAATGTTTCCTTTCACTCATGAATCTGAACGCAGCATTGGGCGGCAGCATTaGCGCGGGGACGTGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: IMQPTNAMFPFTHESERSIGRQH*RGDVSH Trigger: GTGGCTCACGTCCCCGCGGCAATGCTGCCGCCCAAT...GCTGCGTTCAGATTCATGAGTGAAAGGAAACATTGCATTTGTTGGCTGCATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | CCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAAACTCTGCTGGGCTGCTaGTTGCACACGAAGTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: PGSQPFQDLKSEILRLRETLLGC*LHTKSV Trigger: GACGGACTTCGTGTGCAAGCAGCAGCCCAGCAGAGT...TTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAATCTGGTGGCCTGCAGTaGGGTGCAAATCCGGCATGT | + |
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Preference number: 4 (lower is better) Translates to: PGSQPFQDLKSEILRLRESGGLQ*GANPAC Trigger: ACATGCCGGATTTGCACCCCACTGCAGGCCACCAGA...TTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR TCA 90 bp | ACGCAGCGCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGGCCCCATGGCGTGCCTaGTGCCGCTCGTGGCATTCA | + |
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Preference number: 4 (lower is better) Translates to: TQRSHLKPSTKSTRLSSLAPWRA*CRSWHS Trigger: TGAATGCCACGAGCGGCATCAGGCACGCCATGGGGC...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGCGCTGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR TCA 90 bp | CCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAAGTTCGGGCAGCTCCTTaGTGCGGTCCAAACCCATTT | + |
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Preference number: 4 (lower is better) Translates to: PGSQPFQDLKSEILRLREVRAAP*CGPNPF Trigger: AAATGGGTTTGGACCGCATCAAGGAGCTGCCCGAAC...TTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | ACGCAGCGCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGGCTTCTGCAGCTGCATaGTGGCCGGCAGGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TQRSHLKPSTKSTRLSSLASAAA*WPAGSL Trigger: GAGGCTCCCTGCCGGCCAGCATGCAGCTGCAGAAGC...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGCGCTGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCCAAGTTCATCTGGTGGCCTaGAGTGGGGTGCAAATCCGG | + |
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Preference number: 4 (lower is better) Translates to: SEMAVCAVISALQRSCSQVHLVA*SGVQIR Trigger: CCGGATTTGCACCCCACTGCAGGCCACCAGATGAAC...TTGGCTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CCA 90 bp | AAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCCATCGGGGAAGCGCCCGTaGTTCATGGCCATCATATGG | + |
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Preference number: 4 (lower is better) Translates to: KRDGSLCSNICPSKIMQPSGKRP*FMAIIW Trigger: CCATATGATGGCCATGAACCACGGGCGCTTCCCCGA...TGGCTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CCA 90 bp | AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCCAATCTGGTGGCCTGCAGTaGGGTGCAAATCCGGCATGT | + |
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Preference number: 4 (lower is better) Translates to: SEMAVCAVISALQRSCSQSGGLQ*GANPAC Trigger: ACATGCCGGATTTGCACCCCACTGCAGGCCACCAGA...TTGGCTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CCA 90 bp | AAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCCATTTGTCCCGTTCATCTaGTGGCCTGCAGTGGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: KRDGSLCSNICPSKIMQPFVPFI*WPAVGC Trigger: GCACCCCACTGCAGGCCACCAGATGAACGGGACAAA...TGGCTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR TCA 90 bp | AAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCCAGTTCGGGCAGCTCCTTaGTGCGGTCCAAACCCATTT | + |
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Preference number: 4 (lower is better) Translates to: KRDGSLCSNICPSKIMQPVRAAP*CGPNPF Trigger: AAATGGGTTTGGACCGCATCAAGGAGCTGCCCGAAC...TGGCTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | CCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAATCGTGGCATTCATGTTaGCCGCGCCGTAGTGTATGT | + |
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Preference number: 4 (lower is better) Translates to: PGSQPFQDLKSEILRLRESWHSC*PRRSVC Trigger: ACATACACTACGGCGCGGGCAACATGAATGCCACGA...TTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | TTTCCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGCGCTGTGCTTGGGGTTaGAATCTCGGAAGTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: FPGSQPFQDLKSEILRLRRCAWG*NLGSAG Trigger: ACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCG...CCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | CCATCTACAAAATCCACAAGATTAAGCAGTTTGCCAAGCTTAATATCTAACAGTCCGCACCGCCAGGGGTaGTGCTGCCTCCGCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: PSTKSTRLSSLPSLISNSPHRQG*CCLRCA Trigger: AGCACAGCGGAGGCAGCAGCACCCCTGGCGGTGCGG...ACTGTTAGATATTAAGCTTGGCAAACTGCTTAATCTTGTGGATTTTGTAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR GCA 90 bp | ATGAAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCTGACTCTGCTGGGCTaGTGCTTGCACACGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MKRDGSLCSNICPSKIMQLTLLG*CLHTKS Trigger: GGACTTCGTGTGCAAGCAGCAGCCCAGCAGAGTCAG...CTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CCA 90 bp | TATTATTGTCTGTACATATGGGGGAGGGGAGACAGCCAACTTGAAAGTGAACGGAGCGCCCGTGGTTCATaGCCATCATATGGTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YYCLYIWGRGDSQLESERSARGS*PSYGLP Trigger: TGGCAGACCATATGATGGCCATGAACCACGGGCGCT...CCGTTCACTTTCAAGTTGGCTGTCTCCCCTCCCCCATATGTACAGACAATAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGTCGGGGAAGCGCCCGTaGTTCATGGCCATCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: MKRDGSLCSNICPSKIMQSGKRP*FMAIIW Trigger: CCATATGATGGCCATGAACCACGGGCGCTTCCCCGA...CTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | CCATCTACAAAATCCACAAGATTAAGCAGTTTGCCAAGCTTAATATCTAACAGTTGGGCAGGGTGGTGGTaGAGCCCGTTGGTGCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PSTKSTRLSSLPSLISNSWAGWW*SPLVPS Trigger: CGACGGCACCAACGGGCTGCACCACCACCCTGCCCA...ACTGTTAGATATTAAGCTTGGCAAACTGCTTAATCTTGTGGATTTTGTAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | CCATCTACAAAATCCACAAGATTAAGCAGTTTGCCAAGCTTAATATCTAACAGTTGCGGGCTCGGGAACTaGCCCATGCCCATGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSTKSTRLSSLPSLISNSCGLGN*PMPMRW Trigger: CCACCGCATGGGCATGGGGCAGTTCCCGAGCCCGCA...ACTGTTAGATATTAAGCTTGGCAAACTGCTTAATCTTGTGGATTTTGTAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | ACGCAGCGCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGTTGAGCTTCTGCAGCTaGATGCTGGCCGGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQRSHLKPSTKSTRLSSLLSFCS*MLAGRE Trigger: CTCCCTGCCGGCCAGCATGCAGCTGCAGAAGCTCAA...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGCGCTGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | GAAATGTTTGCCACTGACGACATTCCACACCCTATTATTGTCTGTACATATGGGTGGTTGTTGAGCTTCTaGAGCTGCATGCTGGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: EMFATDDIPHPIIVCTYGWLLSF*SCMLAG Trigger: GCCGGCCAGCATGCAGCTGCAGAAGCTCAACAACCA...CCCATATGTACAGACAATAATAGGGTGTGGAATGTCGTCAGTGGCAAACATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | ATCATGCAGCCAACAAATGCAATGTTTCCTTTCACTCATGAATCTGAACGCAGCTGGTTGTTGAGCTTCTaGAGCTGCATGCTGGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IMQPTNAMFPFTHESERSWLLSF*SCMLAG Trigger: GCCGGCCAGCATGCAGCTGCAGAAGCTCAACAACCA...GCTGCGTTCAGATTCATGAGTGAAAGGAAACATTGCATTTGTTGGCTGCATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | ATCATGCAGCCAACAAATGCAATGTTTCCTTTCACTCATGAATCTGAACGCAGCACTCTGCTGGGCTGCTaGTTGCACACGAAGTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IMQPTNAMFPFTHESERSTLLGC*LHTKSV Trigger: GACGGACTTCGTGTGCAAGCAGCAGCCCAGCAGAGT...GCTGCGTTCAGATTCATGAGTGAAAGGAAACATTGCATTTGTTGGCTGCATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | ATCATGCAGCCAACAAATGCAATGTTTCCTTTCACTCATGAATCTGAACGCAGCCTGACTCTGCTGGGCTaGTGCTTGCACACGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IMQPTNAMFPFTHESERSLTLLG*CLHTKS Trigger: GGACTTCGTGTGCAAGCAGCAGCCCAGCAGAGTCAG...GCTGCGTTCAGATTCATGAGTGAAAGGAAACATTGCATTTGTTGGCTGCATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | ACGCAGCGCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGGTTCATCTGGTGGCCTaGAGTGGGGTGCAAATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TQRSHLKPSTKSTRLSSLVHLVA*SGVQIR Trigger: CCGGATTTGCACCCCACTGCAGGCCACCAGATGAAC...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGCGCTGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | CCATCTACAAAATCCACAAGATTAAGCAGTTTGCCAAGCTTAATATCTAACAGTATTGGGCGGCAGCATTaGCGCGGGGACGTGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSTKSTRLSSLPSLISNSIGRQH*RGDVSH Trigger: GTGGCTCACGTCCCCGCGGCAATGCTGCCGCCCAAT...ACTGTTAGATATTAAGCTTGGCAAACTGCTTAATCTTGTGGATTTTGTAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCACTCATGAATCTGAACGCAGCGCAGTCATTTGAAACCATCTACAAAATCGTCCCGTTCATCTGGTaGCCTGCAGTGGGGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLMNLNAAQSFETIYKIVPFIW*PAVGCK Trigger: TTTGCACCCCACTGCAGGCCACCAGATGAACGGGAC...GATTTTGTAGATGGTTTCAAATGACTGCGCTGCGTTCAGATTCATGAGTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCACTCATGAATCTGAACGCAGCGCAGTCATTTGAAACCATCTACAAAATCTTTGTCCCGTTCATCTaGTGGCCTGCAGTGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLMNLNAAQSFETIYKIFVPFI*WPAVGC Trigger: GCACCCCACTGCAGGCCACCAGATGAACGGGACAAA...GATTTTGTAGATGGTTTCAAATGACTGCGCTGCGTTCAGATTCATGAGTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CCA 90 bp | GAAATGTTTGCCACTGACGACATTCCACACCCTATTATTGTCTGTACATATGGGTGCCTCCGCTGTGCTTaGGGTTGCAATCTCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EMFATDDIPHPIIVCTYGCLRCA*GCNLGS Trigger: ACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCA...CCCATATGTACAGACAATAATAGGGTGTGGAATGTCGTCAGTGGCAAACATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | GAAATGTTTGCCACTGACGACATTCCACACCCTATTATTGTCTGTACATATGGGTCGTGGCATTCATGTTaGCCGCGCCGTAGTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: EMFATDDIPHPIIVCTYGSWHSC*PRRSVC Trigger: ACATACACTACGGCGCGGGCAACATGAATGCCACGA...CCCATATGTACAGACAATAATAGGGTGTGGAATGTCGTCAGTGGCAAACATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CCA 90 bp | AAGACCAAGTTAGCTAGATATTTCAACTACATAAGGGAGGTGAATGTCAAGGCTGTCCCGTTCATCTGGTaGCCTGCAGTGGGGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTKLARYFNYIREVNVKAVPFIW*PAVGCK Trigger: TTTGCACCCCACTGCAGGCCACCAGATGAACGGGAC...AGCCTTGACATTCACCTCCCTTATGTAGTTGAAATATCTAGCTAACTTGGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCACTCATGAATCTGAACGCAGCGCAGTCATTTGAAACCATCTACAAAATCTGCCTCCGCTGTGCTTaGGGTTGCAATCTCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLMNLNAAQSFETIYKICLRCA*GCNLGS Trigger: ACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCA...GATTTTGTAGATGGTTTCAAATGACTGCGCTGCGTTCAGATTCATGAGTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| 3UTR CAA 72 bp | AAATGTTTGCCACTGACGACATTCCACACCCTATTATaGTCTGTACATATGGGGGAGGGGAGACAGCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: KCLPLTTFHTLL*SVHMGEGRQPT Trigger: AGTTGGCTGTCTCCCCTCCCCCATATGTACAGACAATAATAGGGTGTGGAATGTCGTCAGTGGCAAACATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CCA 90 bp | AAGACCAAGTTAGCTAGATATTTCAACTACATAAGGGAGGTGAATGTCAAGGCTAGCGCCCGTGGTTCATaGCCATCATATGGTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTKLARYFNYIREVNVKASARGS*PSYGLP Trigger: TGGCAGACCATATGATGGCCATGAACCACGGGCGCT...AGCCTTGACATTCACCTCCCTTATGTAGTTGAAATATCTAGCTAACTTGGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCACTCATGAATCTGAACGCAGCGCAGTCATTTGAAACCATCTACAAAATCTTGCAATCTCGGAAGTaGTGGTTTGTCCCGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LSLMNLNAAQSFETIYKILQSRK*WFVPFI Trigger: GATGAACGGGACAAACCAGCACTTCCGAGATTGCAA...GATTTTGTAGATGGTTTCAAATGACTGCGCTGCGTTCAGATTCATGAGTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | ACGCAGCGCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGTTGCAATCTCGGAAGTaGTGGTTTGTCCCGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TQRSHLKPSTKSTRLSSLLQSRK*WFVPFI Trigger: GATGAACGGGACAAACCAGCACTTCCGAGATTGCAA...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGCGCTGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR GCA 90 bp | CCATCTACAAAATCCACAAGATTAAGCAGTTTGCCAAGCTTAATATCTAACAGTCGCTGTGCTTGGGGTTaGAATCTCGGAAGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSTKSTRLSSLPSLISNSRCAWG*NLGSAG Trigger: ACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCG...ACTGTTAGATATTAAGCTTGGCAAACTGCTTAATCTTGTGGATTTTGTAGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CCA 90 bp | AAGACCAAGTTAGCTAGATATTTCAACTACATAAGGGAGGTGAATGTCAAGGCTCAATCTCGGAAGTGCTaGTTTGTCCCGTTCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTKLARYFNYIREVNVKAQSRKC*FVPFIW Trigger: CCAGATGAACGGGACAAACCAGCACTTCCGAGATTG...AGCCTTGACATTCACCTCCCTTATGTAGTTGAAATATCTAGCTAACTTGGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CCA 90 bp | CTTTCACTCATGAATCTGAACGCAGCGCAGTCATTTGAAACCATCTACAAAATCAAATCAAACTCATTTTaGCCCAGCCAGAGTTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLMNLNAAQSFETIYKIKSNSF*PSQSSG Trigger: GCCCGAACTCTGGCTGGGCCAAAATGAGTTTGATTT...GATTTTGTAGATGGTTTCAAATGACTGCGCTGCGTTCAGATTCATGAGTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS GCA 90 bp | GCAGCATTGCCGCGGGGACGTGAGCCACCGAGGCGGGCATGGTGCTaGCACCGCCGCTGCCGCCCGCGCTGCTGCCACCCGCGCCGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AALPRGREPPRRAWC*HRRCRPRCCHPRRP Trigger: CGGGCGGCGCGGGTGGCAGCAGCGCGGGCGGCAGCGGCGGTGGCAGCACCATGCCCGCCTCGGTGGCTCACGTCCCCGCGGCAATGCTGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CCA 90 bp | TGGGCGGCAGCATTGCCGCGGGGACGTGAGCCACCGAGGCGGGCATaGTGCTGCCACCGCCGCTGCCGCCCGCGCTGCTGCCACCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: WAAALPRGREPPRRA*CCHRRCRPRCCHPR Trigger: GCGCGGGTGGCAGCAGCGCGGGCGGCAGCGGCGGTGGCAGCACCATGCCCGCCTCGGTGGCTCACGTCCCCGCGGCAATGCTGCCGCCCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CCA 90 bp | TGCGGGCTCGGGAACTGCCCCATGCCCATGCGGTGGGCAGGGTGGTaGTGCAGCCCGTTGGTGCCGTCGGGGAAGCGCCCGTGGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: CGLGNCPMPMRWAGW*CSPLVPSGKRPWFM Trigger: CATGAACCACGGGCGCTTCCCCGACGGCACCAACGGGCTGCACCACCACCCTGCCCACCGCATGGGCATGGGGCAGTTCCCGAGCCCGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS GCA 90 bp | GCCCCATGCCCATGCGGTGGGCAGGGTGGTGGTGCAGCCCGTTGGTaGCGTCGGGGAAGCGCCCGTGGTTCATGGCCATCATATGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: APCPCGGQGGGAARW*RRGSARGSWPSYGL Trigger: CAGACCATATGATGGCCATGAACCACGGGCGCTTCCCCGACGGCACCAACGGGCTGCACCACCACCCTGCCCACCGCATGGGCATGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CCA 90 bp | ACTGCCCCATGCCCATGCGGTGGGCAGGGTGGTGGTGCAGCCCGTTaGTGCCGTCGGGGAAGCGCCCGTGGTTCATGGCCATCATATGGT | + |
|
Preference number: 5 (lower is better) Translates to: TAPCPCGGQGGGAAR*CRRGSARGSWPSYG Trigger: ACCATATGATGGCCATGAACCACGGGCGCTTCCCCGACGGCACCAACGGGCTGCACCACCACCCTGCCCACCGCATGGGCATGGGGCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS GCA 90 bp | GTGCCGCTGCCACCCGCACCGCCAGGGGTGCTGCTGCCTCCGCTGTaGTTGGGGTTGCAATCTCGGAAGTGCTGGTTTGTCCCGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VPLPPAPPGVLLPPL*LGLQSRKCWFVPFI Trigger: GATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCAGCACCCCTGGCGGTGCGGGTGGCAGCGGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS GCA 90 bp | CACCCGCACCGCCAGGGGTGCTGCTGCCTCCGCTGTGCTTGGGGTTaGAATCTCGGAAGTGCTGGTTTGTCCCGTTCATCTGGTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HPHRQGCCCLRCAWG*NLGSAGLSRSSGGL Trigger: CAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCAGCACCCCTGGCGGTGCGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS CCA 90 bp | CGCTGCCACCCGCACCGCCAGGGGTGCTGCTGCCTCCGCTGTGCTTaGGGTTGCAATCTCGGAAGTGCTGGTTTGTCCCGTTCATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RCHPHRQGCCCLRCA*GCNLGSAGLSRSSG Trigger: ACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCAGCACCCCTGGCGGTGCGGGTGGCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS GCA 90 bp | TTCCTCGTCGATGAAATCAGTGTCTATGACATTGGGCGGCAGCATTaGCGCGGGGACGTGAGCCACCGAGGCGGGCATGGTGCTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FLVDEISVYDIGRQH*RGDVSHRGGHGAAT Trigger: GGTGGCAGCACCATGCCCGCCTCGGTGGCTCACGTCCCCGCGGCAATGCTGCCGCCCAATGTCATAGACACTGATTTCATCGACGAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS CCA 90 bp | GTGCTGCTGCCTCCGCTGTGCTTGGGGTTGCAATCTCGGAAGTGCTaGTTTGTCCCGTTCATCTGGTGGCCTGCAGTGGGGTGCAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: VLLPPLCLGLQSRKC*FVPFIWWPAVGCKS Trigger: GGATTTGCACCCCACTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS GCA 90 bp | GTTGCAATCTCGGAAGTGCTGGTTTGTCCCGTTCATCTGGTGGCCTaGAGTGGGGTGCAAATCCGGCATGTAGTGGTTGTGGGGGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAISEVLVCPVHLVA*SGVQIRHVVVVGVG Trigger: CCCTACCCCCACAACCACTACATGCCGGATTTGCACCCCACTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS CCA 90 bp | AATCTCGGAAGTGCTGGTTTGTCCCGTTCATCTGGTGGCCTGCAGTaGGGTGCAAATCCGGCATGTAGTGGTTGTGGGGGTAGGGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NLGSAGLSRSSGGLQ*GANPACSGCGGRGD Trigger: ATCACCCCTACCCCCACAACCACTACATGCCGGATTTGCACCCCACTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CAA 90 bp | TCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAATGTTTGTTTGGTGGTGCAGCCCGTaGGTGCCGTCGGGGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: STLSGSEKRDTASKGMFVWWCSP*VPSGKR Trigger: GCGCTTCCCCGACGGCACCAACGGGCTGCACCACCA...AACAAACATTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAACCCATGAACTGGGAGTaGTTAAACCTGGCGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSQPFQDLKSEILRLREPMNWE*LNLAAG Trigger: CCCGGCCGCCAGGTTTAACAACTCCCAGTTCATGGG...TTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGCCCATGAACTGGGAGTaGTTAAACCTGGCGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPGSQPFQDLKSEILRLRPMNWE*LNLAAG Trigger: CCCGGCCGCCAGGTTTAACAACTCCCAGTTCATGGG...CCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGCCGCTGTGCTTGGGGTaGCAATCTCGGAAGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPGSQPFQDLKSEILRLRPLCLG*QSRKCW Trigger: CCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGG...CCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGCTGCCTCCGCTGTGCTaGGGGTTGCAATCTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPGSQPFQDLKSEILRLRLPPLC*GLQSRK Trigger: CTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAG...CCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CAA 90 bp | ACGCAGCGCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGCATTGGGCGGCAGCATaGCCGCGGGGACGTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TQRSHLKPSTKSTRLSSLHWAAA*PRGREP Trigger: TGGCTCACGTCCCCGCGGCAATGCTGCCGCCCAATG...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGCGCTGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAATCAGTGTCTATGACATaGGGCGGCAGCATTGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGSQPFQDLKSEILRLRESVSMT*GGSIAA Trigger: CGCGGCAATGCTGCCGCCCAATGTCATAGACACTGA...TTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CAA 90 bp | ATGAAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCTGCCTCCGCTGTGCTaGGGGTTGCAATCTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MKRDGSLCSNICPSKIMQLPPLC*GLQSRK Trigger: CTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAG...CTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CAA 90 bp | AAGACCAAGTTAGCTAGATATTTCAACTACATAAGGGAGGTGAATGTCAAGGCTCATTGGGCGGCAGCATaGCCGCGGGGACGTGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: KTKLARYFNYIREVNVKAHWAAA*PRGREP Trigger: TGGCTCACGTCCCCGCGGCAATGCTGCCGCCCAATG...AGCCTTGACATTCACCTCCCTTATGTAGTTGAAATATCTAGCTAACTTGGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CAA 90 bp | ATGAAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCTCGGAAGTGCTGGTTaGTCCCGTTCATCTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MKRDGSLCSNICPSKIMQLGSAG*SRSSGG Trigger: GCCACCAGATGAACGGGACAAACCAGCACTTCCGAG...CTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CAA 90 bp | ATGAAGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGTCAGTGTCTATGACATaGGGCGGCAGCATTGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: MKRDGSLCSNICPSKIMQSVSMT*GGSIAA Trigger: CGCGGCAATGCTGCCGCCCAATGTCATAGACACTGA...CTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CAA 90 bp | ATCATGCAGCCAACAAATGCAATGTTTCCTTTCACTCATGAATCTGAACGCAGCCTCGGAAGTGCTGGTTaGTCCCGTTCATCTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IMQPTNAMFPFTHESERSLGSAG*SRSSGG Trigger: GCCACCAGATGAACGGGACAAACCAGCACTTCCGAG...GCTGCGTTCAGATTCATGAGTGAAAGGAAACATTGCATTTGTTGGCTGCATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CAA 90 bp | TCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGGAATGTTTGTTAGTTCGGGCAGCTCCTaGATGCGGTCCAAACCCATT | + |
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Preference number: 5 (lower is better) Translates to: STLSGSEKRDTASKGMFVSSGSS*MRSKPI Trigger: AATGGGTTTGGACCGCATCAAGGAGCTGCCCGAACT...AACAAACATTCCCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CAA 90 bp | TTTCCAGGTTCTCAACCCTTTCAGGATCTGAAAAGCGAGATACTGCGTCTAAGGTGGTTGAAATACTGGTaGTTGAGCTTCTGCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: FPGSQPFQDLKSEILRLRWLKYW*LSFCSC Trigger: GCAGCTGCAGAAGCTCAACAACCAGTATTTCAACCA...CCTTAGACGCAGTATCTCGCTTTTCAGATCCTGAAAGGGTTGAGAACCTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CAA 90 bp | TATTATTGTCTGTACATATGGGGGAGGGGAGACAGCCAACTTGAAAGTGAACGGTGGTTGAAATACTGGTaGTTGAGCTTCTGCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: YYCLYIWGRGDSQLESERWLKYW*LSFCSC Trigger: GCAGCTGCAGAAGCTCAACAACCAGTATTTCAACCA...CCGTTCACTTTCAAGTTGGCTGTCTCCCCTCCCCCATATGTACAGACAATAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CAA 90 bp | AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCAAAGATCATGCAGCCAATTGAAATACTGGTTGTaGAGCTTCTGCAGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SEMAVCAVISALQRSCSQLKYWL*SFCSCM Trigger: CATGCAGCTGCAGAAGCTCAACAACCAGTATTTCAA...TTGGCTGCATGATCTTTGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CAA 90 bp | AAGACCAAGTTAGCTAGATATTTCAACTACATAAGGGAGGTGAATGTCAAGGCTAGTTCGGGCAGCTCCTaGATGCGGTCCAAACCCATT | + |
|
Preference number: 5 (lower is better) Translates to: KTKLARYFNYIREVNVKASSGSS*MRSKPI Trigger: AATGGGTTTGGACCGCATCAAGGAGCTGCCCGAACT...AGCCTTGACATTCACCTCCCTTATGTAGTTGAAATATCTAGCTAACTTGGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS-3UTR CAA 90 bp | AAGACCAAGTTAGCTAGATATTTCAACTACATAAGGGAGGTGAATGTCAAGGCTTTGAAATACTGGTTGTaGAGCTTCTGCAGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: KTKLARYFNYIREVNVKALKYWL*SFCSCM Trigger: CATGCAGCTGCAGAAGCTCAACAACCAGTATTTCAA...AGCCTTGACATTCACCTCCCTTATGTAGTTGAAATATCTAGCTAACTTGGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CCA 72 bp | GGGAACTGCCCCATGCCCATGCGGTGGGCAGGGTGGTaGTGCAGCCCGTTGGTGCCGTCGGGGAAGCGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GNCPMPMRWAGW*CSPLVPSGKRP Trigger: CGGGCGCTTCCCCGACGGCACCAACGGGCTGCACCACCACCCTGCCCACCGCATGGGCATGGGGCAGTTCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CCA 72 bp | CTCGGGAACTGCCCCATGCCCATGCGGTGGGCAGGGTaGTGGTGCAGCCCGTTGGTGCCGTCGGGGAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LGNCPMPMRWAG*WCSPLVPSGKR Trigger: GCGCTTCCCCGACGGCACCAACGGGCTGCACCACCACCCTGCCCACCGCATGGGCATGGGGCAGTTCCCGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CAA 72 bp | CCCTGGCTGGCCACCGGGGGACCCATGAACTGGGAGTaGTTAAACCTGGCGGCCGGGGCCAGAGCGCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PWLATGGPMNWE*LNLAAGARALG Trigger: CCCGAGCGCTCTGGCCCCGGCCGCCAGGTTTAACAACTCCCAGTTCATGGGTCCCCCGGTGGCCAGCCAGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS GCA 72 bp | GGGTGCCGCTGCCACCCGCACCGCCAGGGGTGCTGCTaGCTCCGCTGTGCTTGGGGTTGCAATCTCGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GCRCHPHRQGCC*LRCAWGCNLGS Trigger: ACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCAGCACCCCTGGCGGTGCGGGTGGCAGCGGCACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CAA 90 bp | AACTGCCCCATGCCCATGCGGTGGGCAGGGTGGTGGTGCAGCCCGTaGGTGCCGTCGGGGAAGCGCCCGTGGTTCATGGCCATCATATGG | + |
|
Preference number: 6 (lower is better) Translates to: NCPMPMRWAGWWCSP*VPSGKRPWFMAIIW Trigger: CCATATGATGGCCATGAACCACGGGCGCTTCCCCGACGGCACCAACGGGCTGCACCACCACCCTGCCCACCGCATGGGCATGGGGCAGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CAA 72 bp | CCCGCACCGCCAGGGGTGCTGCTGCCTCCGCTGTGCTaGGGGTTGCAATCTCGGAAGTGCTGGTTTGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PAPPGVLLPPLC*GLQSRKCWFVP Trigger: CGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCAGCACCCCTGGCGGTGCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CAA 90 bp | CCGCTGCCACCCGCACCGCCAGGGGTGCTGCTGCCTCCGCTGTGCTaGGGGTTGCAATCTCGGAAGTGCTGGTTTGTCCCGTTCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PLPPAPPGVLLPPLC*GLQSRKCWFVPFIW Trigger: CCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCAGCACCCCTGGCGGTGCGGGTGGCAGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS GCA 72 bp | CCACCCGCACCGCCAGGGGTGCTGCTGCCTCCGCTGTaGTTGGGGTTGCAATCTCGGAAGTGCTGGTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PPAPPGVLLPPL*LGLQSRKCWFV Trigger: GACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCAGCACCCCTGGCGGTGCGGGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CCA 72 bp | CCGCACCGCCAGGGGTGCTGCTGCCTCCGCTGTGCTTaGGGTTGCAATCTCGGAAGTGCTGGTTTGTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PHRQGCCCLRCA*GCNLGSAGLSR Trigger: ACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCAGCACCCCTGGCGGTGCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CAA 90 bp | CCACCCGCACCGCCAGGGGTGCTGCTGCCTCCGCTGTGCTTGGGGTaGCAATCTCGGAAGTGCTGGTTTGTCCCGTTCATCTGGTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PPAPPGVLLPPLCLG*QSRKCWFVPFIWWP Trigger: AGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCAGCACCCCTGGCGGTGCGGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CAA 72 bp | CCGCCAGGGGTGCTGCTGCCTCCGCTGTGCTTGGGGTaGCAATCTCGGAAGTGCTGGTTTGTCCCGTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PPGVLLPPLCLG*QSRKCWFVPFI Trigger: GATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCAGCACCCCTGGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS GCA 72 bp | CGCCAGGGGTGCTGCTGCCTCCGCTGTGCTTGGGGTTaGAATCTCGGAAGTGCTGGTTTGTCCCGTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: RQGCCCLRCAWG*NLGSAGLSRSS Trigger: AGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCAGCACCCCTGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS GCA 72 bp | GATGAAATCAGTGTCTATGACATTGGGCGGCAGCATTaGCGCGGGGACGTGAGCCACCGAGGCGGGCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: DEISVYDIGRQH*RGDVSHRGGHG Trigger: ACCATGCCCGCCTCGGTGGCTCACGTCCCCGCGGCAATGCTGCCGCCCAATGTCATAGACACTGATTTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CCA 72 bp | CCTCCGCTGTGCTTGGGGTTGCAATCTCGGAAGTGCTaGTTTGTCCCGTTCATCTGGTGGCCTGCAGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PPLCLGLQSRKC*FVPFIWWPAVG Trigger: CCCCACTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CAA 90 bp | TGCTGCCTCCGCTGTGCTTGGGGTTGCAATCTCGGAAGTGCTGGTTaGTCCCGTTCATCTGGTGGCCTGCAGTGGGGTGCAAATCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CCLRCAWGCNLGSAG*SRSSGGLQWGANPA Trigger: TGCCGGATTTGCACCCCACTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS GCA 72 bp | CTGCCTCCGCTGTGCTTGGGGTTGCAATCTCGGAAGTaGTGGTTTGTCCCGTTCATCTGGTGGCCTGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPPLCLGLQSRK*WFVPFIWWPAV Trigger: CACTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CAA 72 bp | CGCTGTGCTTGGGGTTGCAATCTCGGAAGTGCTGGTTaGTCCCGTTCATCTGGTGGCCTGCAGTGGGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RCAWGCNLGSAG*SRSSGGLQWGA Trigger: TGCACCCCACTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS CCA 72 bp | AGTGCTGGTTTGTCCCGTTCATCTGGTGGCCTGCAGTaGGGTGCAAATCCGGCATGTAGTGGTTGTGGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SAGLSRSSGGLQ*GANPACSGCGG Trigger: ACCCCCACAACCACTACATGCCGGATTTGCACCCCACTGCAGGCCACCAGATGAACGGGACAAACCAGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS GCA 72 bp | TCGGAAGTGCTGGTTTGTCCCGTTCATCTGGTGGCCTaGAGTGGGGTGCAAATCCGGCATGTAGTGGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SEVLVCPVHLVA*SGVQIRHVVVV Trigger: CACAACCACTACATGCCGGATTTGCACCCCACTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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| CDS TCA 72 bp | ACTCATTTTGGCCCAGCCAGAGTTCGGGCAGCTCCTTaGTGCGGTCCAAACCCATTTCTATCACTAAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: THFGPARVRAAP*CGPNPFLSLRT Trigger: TGTCCTTAGTGATAGAAATGGGTTTGGACCGCATCAAGGAGCTGCCCGAACTCTGGCTGGGCCAAAATGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038107.9 ENSMUST00000219558.2 |
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