RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CIT (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029516

Ensembl transcript IDs: ENSMUST00000051704.15, ENSMUST00000102560.7, ENSMUST00000112008.9, ENSMUST00000123736.2, ENSMUST00000137952.8, ENSMUST00000141101.5, ENSMUST00000148245.8

Found 656 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCGCAGCTCTGTCCGACCCTCTCTGTCTCGGTAGCGGTGCGGTGTaGTTGGCTCTCGGGGGTGGCTGGGGCCTTCCGGTGGCGCCGGGC +
Preference number: 1 (lower is better)
Translates to: CAALSDPLCLGSGAV*LALGGGWGLPVAPG
Trigger: GCCCGGCGCCACCGGAAGGCCCCAGCCACCCCCGAGAGCCAAGCACACCGCACCGCTACCGAGACAGAGAGGGTCGGACAGAGCTGCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp CAGCTCTGTCCGACCCTCTCTGTCTCGGTAGCGGTGCGGTGTGCTTaGCTCTCGGGGGTGGCTGGGGCCTTCCGGTGGCGCCGGGCTGGA +
Preference number: 1 (lower is better)
Translates to: QLCPTLSVSVAVRCA*LSGVAGAFRWRRAG
Trigger: TCCAGCCCGGCGCCACCGGAAGGCCCCAGCCACCCCCGAGAGCCAAGCACACCGCACCGCTACCGAGACAGAGAGGGTCGGACAGAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp GCGGTGCGGTGTGCTTGGCTCTCGGGGGTGGCTGGGGCCTTCCGGTaGCGCCGGGCTGGAGGCCACGCGTTTGGTGATGTGCTCGTTGTA +
Preference number: 1 (lower is better)
Translates to: AVRCAWLSGVAGAFR*RRAGGHAFGDVLVV
Trigger: TACAACGAGCACATCACCAAACGCGTGGCCTCCAGCCCGGCGCCACCGGAAGGCCCCAGCCACCCCCGAGAGCCAAGCACACCGCACCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp GGCTGGTGCTCGGGCGACCGCACAATGGCAGACATGGCGATCTGCTaGCTCGCAGTGGCTGGCGTAGACGGGTGCGGGTGGTCCGTGGCT +
Preference number: 1 (lower is better)
Translates to: GWCSGDRTMADMAIC*LAVAGVDGCGWSVA
Trigger: AGCCACGGACCACCCGCACCCGTCTACGCCAGCCACTGCGAGGCAGCAGATCGCCATGTCTGCCATTGTGCGGTCGCCCGAGCACCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp CTGGGCTGGTGCTCGGGCGACCGCACAATGGCAGACATGGCGATCTaGTGCCTCGCAGTGGCTGGCGTAGACGGGTGCGGGTGGTCCGTG +
Preference number: 1 (lower is better)
Translates to: LGWCSGDRTMADMAI*CLAVAGVDGCGWSV
Trigger: CACGGACCACCCGCACCCGTCTACGCCAGCCACTGCGAGGCAGCAGATCGCCATGTCTGCCATTGTGCGGTCGCCCGAGCACCAGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp GGGCCTTCCGGTGGCGCCGGGCTGGAGGCCACGCGTTTGGTGATGTaGTCGTTGTATGTTGGTGGGCCTCGCTTGTTGGGGCTGCGGGAG +
Preference number: 1 (lower is better)
Translates to: GPSGGAGLEATRLVM*SLYVGGPRLLGLRE
Trigger: CTCCCGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCCTCCAGCCCGGCGCCACCGGAAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp CTGGGGACTTCTCCCGCTCCAGAGGGCGGCCTGGAGACTTGTCCCTaGGCAGCTCTGTCCGACCCTCTCTGTCTCGGTAGCGGTGCGGTG +
Preference number: 1 (lower is better)
Translates to: LGTSPAPEGGLETCP*AALSDPLCLGSGAV
Trigger: CACCGCACCGCTACCGAGACAGAGAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGGAGCGGGAGAAGTCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp CGACCGCACAATGGCAGACATGGCGATCTGCTGCCTCGCAGTGGCTaGCGTAGACGGGTGCGGGTGGTCCGTGGCTTTGCGGTGGGCAGC +
Preference number: 1 (lower is better)
Translates to: RPHNGRHGDLLPRSG*RRRVRVVRGFAVGS
Trigger: GCTGCCCACCGCAAAGCCACGGACCACCCGCACCCGTCTACGCCAGCCACTGCGAGGCAGCAGATCGCCATGTCTGCCATTGTGCGGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp CGCCGGGCTGGAGGCCACGCGTTTGGTGATGTGCTCGTTGTATGTTaGTGGGCCTCGCTTGTTGGGGCTGCGGGAGGTGGAGGGCACCCG +
Preference number: 1 (lower is better)
Translates to: RRAGGHAFGDVLVVC*WASLVGAAGGGGHP
Trigger: CGGGTGCCCTCCACCTCCCGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCCTCCAGCCCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp CTGCGGCTGGATGGTGGGGCAAGCAGGCTCATGGCACTGGGCTGGTaGTCGGGCGACCGCACAATGGCAGACATGGCGATCTGCTGCCTC +
Preference number: 1 (lower is better)
Translates to: LRLDGGASRLMALGW*SGDRTMADMAICCL
Trigger: GAGGCAGCAGATCGCCATGTCTGCCATTGTGCGGTCGCCCGAGCACCAGCCCAGTGCCATGAGCCTGCTTGCCCCACCATCCAGCCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp CGGGCTGGAGGCCACGCGTTTGGTGATGTGCTCGTTGTATGTTGGTaGGCCTCGCTTGTTGGGGCTGCGGGAGGTGGAGGGCACCCGGTG +
Preference number: 1 (lower is better)
Translates to: RAGGHAFGDVLVVCW*ASLVGAAGGGGHPV
Trigger: CACCGGGTGCCCTCCACCTCCCGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCCTCCAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp GCTGAGCATTCGGCCTGGGGACTTCTCCCGCTCCAGAGGGCGGCCTaGAGACTTGTCCCTGCGCAGCTCTGTCCGACCCTCTCTGTCTCG +
Preference number: 1 (lower is better)
Translates to: AEHSAWGLLPLQRAA*RLVPAQLCPTLSVS
Trigger: CGAGACAGAGAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGGAGCGGGAGAAGTCCCCAGGCCGAATGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp CAGTCTCCCTGGGGACCGCTCTCTCCTAGTGCTGAGCATTCGGCCTaGGGACTTCTCCCGCTCCAGAGGGCGGCCTGGAGACTTGTCCCT +
Preference number: 1 (lower is better)
Translates to: QSPWGPLSPSAEHSA*GLLPLQRAAWRLVP
Trigger: AGGGACAAGTCTCCAGGCCGCCCTCTGGAGCGGGAGAAGTCCCCAGGCCGAATGCTCAGCACTAGGAGAGAGCGGTCCCCAGGGAGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp TGGGCAGCTTCCTCCCGCGCAGAGCGGAGTTCGATGCGGGTCTTCTaGAGGGCCTCCTCCAGCTCCGCGCATCGGGCTTTCTCCTTTTCC +
Preference number: 1 (lower is better)
Translates to: WAASSRAERSSMRVF*RASSSSAHRAFSFS
Trigger: GGAAAAGGAGAAAGCCCGATGCGCGGAGCTGGAGGAGGCCCTTCAGAAGACCCGCATCGAACTCCGCTCTGCGCGGGAGGAAGCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp TTTCTGCGGCTGGATGGTGGGGCAAGCAGGCTCATGGCACTGGGCTaGTGCTCGGGCGACCGCACAATGGCAGACATGGCGATCTGCTGC +
Preference number: 1 (lower is better)
Translates to: FLRLDGGASRLMALG*CSGDRTMADMAICC
Trigger: GCAGCAGATCGCCATGTCTGCCATTGTGCGGTCGCCCGAGCACCAGCCCAGTGCCATGAGCCTGCTTGCCCCACCATCCAGCCGCAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp GGGCCTCGCTTGTTGGGGCTGCGGGAGGTGGAGGGCACCCGGTGCTaGTCAGTGCCTGACTCCTTCACGAGGTTTCCTTTGCAGCATATG +
Preference number: 1 (lower is better)
Translates to: GPRLLGLREVEGTRC*SVPDSFTRFPLQHM
Trigger: CATATGCTGCAAAGGAAACCTCGTGAAGGAGTCAGGCACTGAGCAGCACCGGGTGCCCTCCACCTCCCGCAGCCCCAACAAGCGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp TCGGTGTCCAGCATCCTCTGTAGCTCTCGAACTCGACACTCGAACTaGGACTTCTCGTCGCCGAGGACGCTCCGCCAGGCCTCCCACTGG +
Preference number: 1 (lower is better)
Translates to: SVSSILCSSRTRHSN*DFSSPRTLRQASHW
Trigger: CCAGTGGGAGGCCTGGCGGAGCGTCCTCGGCGACGAGAAGTCCCAGTTCGAGTGTCGAGTTCGAGAGCTACAGAGGATGCTGGACACCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp ACTCCTTTCTGCGGCTGGATGGTGGGGCAAGCAGGCTCATGGCACTaGGCTGGTGCTCGGGCGACCGCACAATGGCAGACATGGCGATCT +
Preference number: 1 (lower is better)
Translates to: TPFCGWMVGQAGSWH*AGARATAQWQTWRS
Trigger: AGATCGCCATGTCTGCCATTGTGCGGTCGCCCGAGCACCAGCCCAGTGCCATGAGCCTGCTTGCCCCACCATCCAGCCGCAGAAAGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp TTGACGACTCCTTTCTGCGGCTGGATGGTGGGGCAAGCAGGCTCATaGCACTGGGCTGGTGCTCGGGCGACCGCACAATGGCAGACATGG +
Preference number: 1 (lower is better)
Translates to: LTTPFCGWMVGQAGS*HWAGARATAQWQTW
Trigger: CCATGTCTGCCATTGTGCGGTCGCCCGAGCACCAGCCCAGTGCCATGAGCCTGCTTGCCCCACCATCCAGCCGCAGAAAGGAGTCGTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp TCCTGCAGGCAGCCGGCCCCTGCTGCTGTCTTCAAACAGTCTCCCTaGGGACCGCTCTCTCCTAGTGCTGAGCATTCGGCCTGGGGACTT +
Preference number: 1 (lower is better)
Translates to: SCRQPAPAAVFKQSP*GPLSPSAEHSAWGL
Trigger: AAGTCCCCAGGCCGAATGCTCAGCACTAGGAGAGAGCGGTCCCCAGGGAGACTGTTTGAAGACAGCAGCAGGGGCCGGCTGCCTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp GTCCCAGACCTTGTTAACCTGGGACAGTGGGGTCCTCACTGCTCCTaGAGGCAGCCGGCCCCTGCTGCTGTCTTCAAACAGTCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: VPDLVNLGQWGPHCS*RQPAPAAVFKQSPW
Trigger: CCAGGGAGACTGTTTGAAGACAGCAGCAGGGGCCGGCTGCCTGCAGGAGCAGTGAGGACCCCACTGTCCCAGGTTAACAAGGTCTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp GAGGTCCCTTGGCCCCAGGTCACTGCCTCTGAGCAGAGGCCCGACTaGCCCTCCATACATTCTCAGCTGGTGGGAAGGGAAGTCGTCAAG +
Preference number: 1 (lower is better)
Translates to: EVPWPQVTASEQRPD*PSIHSQLVGREVVK
Trigger: CTTGACGACTTCCCTTCCCACCAGCTGAGAATGTATGGAGGGTCAGTCGGGCCTCTGCTCAGAGGCAGTGACCTGGGGCCAAGGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR TCA 90 bp ACTGCACCTAAGGGGAACTCGCCAGCCTCAAGGGGCTGGGAGCTTTaGGCTGCGGCTTCTCTCCAATGTCCTGGCCTTAGGTCCAGCCCT +
Preference number: 1 (lower is better)
Translates to: TAPKGNSPASRGWEL*AAASLQCPGLRSSP
Trigger: AGGGCTGGACCTAAGGCCAGGACATTGGAGAGAAGCCGCAGCTCAAAGCTCCCAGCCCCTTGAGGCTGGCGAGTTCCCCTTAGGTGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR GCA 90 bp TCGAATATGTTGGGGGAGACGTCGGGCTGGGCAGGCAGGTGTGACTaGGCCAGGGACTGCTTCACCTTCTTCACGTCCACCAGGCACAGA +
Preference number: 1 (lower is better)
Translates to: SNMLGETSGWAGRCD*ARDCFTFFTSTRHR
Trigger: TCTGTGCCTGGTGGACGTGAAGAAGGTGAAGCAGTCCCTGGCGCAGTCACACCTGCCTGCCCAGCCCGACGTCTCCCCCAACATATTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp TGGCAGCCTTTGACGGCTTCGAATATGTTGGGGGAGACGTCGGGCTaGGCAGGCAGGTGTGACTGCGCCAGGGACTGCTTCACCTTCTTC +
Preference number: 1 (lower is better)
Translates to: WQPLTASNMLGETSG*AGRCDCARDCFTFF
Trigger: GAAGAAGGTGAAGCAGTCCCTGGCGCAGTCACACCTGCCTGCCCAGCCCGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp GCTGCCCGGCGCTGTTCGCCTGCACAATGGAGACAGGGAAGCTGTTaGACGAGGAGGCGAACACAGCAGGTGCCAAGGAATGGTCGTTCT +
Preference number: 1 (lower is better)
Translates to: AARRCSPAQWRQGSC*TRRRTQQVPRNGRS
Trigger: AGAACGACCATTCCTTGGCACCTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCGAACAGCGCCGGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp GTTGTAATCTGGGAAGCGACGTGGACTGTGGACGGACGTGTGGGCTaGAAACACAGACACGGTCACCTGCTGCGGTGGTGGGGACAGGTC +
Preference number: 1 (lower is better)
Translates to: VVIWEATWTVDGRVG*KHRHGHLLRWWGQV
Trigger: GACCTGTCCCCACCACCGCAGCAGGTGACCGTGTCTGTGTTTTCAGCCCACACGTCCGTCCACAGTCCACGTCGCTTCCCAGATTACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR GCA 90 bp TCTGTCTTCAGCAGATCCGCCCGGTCCAGCGCCTCCTGCAGCCCTTaGGTCAGTCTGAAGATGTGGTTCTTCTGCAGGTCCATCTGCTGC +
Preference number: 1 (lower is better)
Translates to: SVFSRSARSSASCSP*VSLKMWFFCRSICC
Trigger: GCAGCAGATGGACCTGCAGAAGAACCACATCTTCAGACTGACGCAAGGGCTGCAGGAGGCGCTGGACCGGGCGGATCTGCTGAAGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp TCGCTCCTTTCTGTCTTCAGCAGATCCGCCCGGTCCAGCGCCTCCTaGAGCCCTTGCGTCAGTCTGAAGATGTGGTTCTTCTGCAGGTCC +
Preference number: 1 (lower is better)
Translates to: SLLSVFSRSARSSAS*SPCVSLKMWFFCRS
Trigger: GGACCTGCAGAAGAACCACATCTTCAGACTGACGCAAGGGCTGCAGGAGGCGCTGGACCGGGCGGATCTGCTGAAGACAGAAAGGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp AGACTGGTCCCAGACCTTGTTAACCTGGGACAGTGGGGTCCTCACTaGTCCTGCAGGCAGCCGGCCCCTGCTGCTGTCTTCAAACAGTCT +
Preference number: 1 (lower is better)
Translates to: RLVPDLVNLGQWGPH*SCRQPAPAAVFKQS
Trigger: AGACTGTTTGAAGACAGCAGCAGGGGCCGGCTGCCTGCAGGAGCAGTGAGGACCCCACTGTCCCAGGTTAACAAGGTCTGGGACCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp GCTCGTCGTTCAGGGCCTCCAGGTCCAGGACCTGCTCCTCCAGCATaGTGCATGTCGTCTTCAGAGCCTCCATCGTCTGGTTCTACCATC +
Preference number: 1 (lower is better)
Translates to: ARRSGPPGPGPAPPA*CMSSSEPPSSGSTI
Trigger: GATGGTAGAACCAGACGATGGAGGCTCTGAAGACGACATGCACCATGCTGGAGGAGCAGGTCCTGGACCTGGAGGCCCTGAACGACGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp ACAGCAGGTATTCTTCTCGCTGCCCGGCGCTGTTCGCCTGCACAATaGAGACAGGGAAGCTGTTGGACGAGGAGGCGAACACAGCAGGTG +
Preference number: 1 (lower is better)
Translates to: TAGILLAARRCSPAQ*RQGSCWTRRRTQQV
Trigger: CACCTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCGAACAGCGCCGGGCAGCGAGAAGAATACCTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp ACAGGCTGTTCTCGATCTTGCCAGCAGCGAACAAGTGGCAGCCTTTaGCGGCTTCGAATATGTTGGGGGAGACGTCGGGCTGGGCAGGCA +
Preference number: 1 (lower is better)
Translates to: TGCSRSCQQRTSGSL*RLRICWGRRRAGQA
Trigger: TGCCTGCCCAGCCCGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGCTGCCACTTGTTCGCTGCTGGCAAGATCGAGAACAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp GCTGCGGTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTaGCTTCGTGGTGGAGGCACGCCTAAGAGTCGAGGAGAATCCAAA +
Preference number: 1 (lower is better)
Translates to: AAVVGTGLPFSLPRV*LRGGGTPKSRGESK
Trigger: TTTGGATTCTCCTCGACTCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCACCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR GCA 90 bp TGGAAGCACAGCAGGTATTCTTCTCGCTGCCCGGCGCTGTTCGCCTaGACAATGGAGACAGGGAAGCTGTTGGACGAGGAGGCGAACACA +
Preference number: 1 (lower is better)
Translates to: WKHSRYSSRCPALFA*TMETGKLLDEEANT
Trigger: TGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCGAACAGCGCCGGGCAGCGAGAAGAATACCTGCTGTGCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp TTTGTCCCGGCAGAAGGCCTCAGTGAAGTGTGTGGCATATTCAGCTaGCAGGCCACAGGTAGCGGGCAAGCAGGTGGAGCATTTGGGGTG +
Preference number: 1 (lower is better)
Translates to: FVPAEGLSEVCGIFS*QATGSGQAGGAFGV
Trigger: CACCCCAAATGCTCCACCTGCTTGCCCGCTACCTGTGGCCTGCCAGCTGAATATGCCACACACTTCACTGAGGCCTTCTGCCGGGACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp GCAGCCTGTTGTGGCCGGTTTGTTGACAGGTCATCGGGAGGGTCTTaGTTTGGTGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCA +
Preference number: 1 (lower is better)
Translates to: AACCGRFVDRSSGGS*FGGAMGWQQYIGRA
Trigger: TGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCACCAAATCAAGACCCTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR GCA 90 bp CGTCGTTCAGGGCCTCCAGGTCCAGGACCTGCTCCTCCAGCATGGTaGATGTCGTCTTCAGAGCCTCCATCGTCTGGTTCTACCATCTAT +
Preference number: 1 (lower is better)
Translates to: RRSGPPGPGPAPPAW*MSSSEPPSSGSTIY
Trigger: ATAGATGGTAGAACCAGACGATGGAGGCTCTGAAGACGACATGCACCATGCTGGAGGAGCAGGTCCTGGACCTGGAGGCCCTGAACGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp TCCGACAGGCTCTCGGCTTTGAGCTTCTGCTCCTTGAGAGCCTGCTaGAGAGCAAGAATCTCGGCCTTGTGTTCCTTCACCGCCAACTCC +
Preference number: 1 (lower is better)
Translates to: SDRLSALSFCSLRAC*RARISALCSFTANS
Trigger: GGAGTTGGCGGTGAAGGAACACAAGGCCGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGAGCAGAAGCTCAAAGCCGAGAGCCTGTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp GCATGTCGTCTTCAGAGCCTCCATCGTCTGGTTCTACCATCTATCTaGGGGGTACAACCCAAAGCCAGTCGCAGGGGAGGGAGACGTCCA +
Preference number: 1 (lower is better)
Translates to: ACRLQSLHRLVLPSI*GVQPKASRRGGRRP
Trigger: TGGACGTCTCCCTCCCCTGCGACTGGCTTTGGGTTGTACCCCTCAGATAGATGGTAGAACCAGACGATGGAGGCTCTGAAGACGACATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp TTGTCCGACAGGCTCTCGGCTTTGAGCTTCTGCTCCTTGAGAGCCTaGTGCAGAGCAAGAATCTCGGCCTTGTGTTCCTTCACCGCCAAC +
Preference number: 1 (lower is better)
Translates to: LSDRLSALSFCSLRA*CRARISALCSFTAN
Trigger: GTTGGCGGTGAAGGAACACAAGGCCGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGAGCAGAAGCTCAAAGCCGAGAGCCTGTCGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp TCCAGGTCGTTGAGCTTGTCCGACAGGCTCTCGGCTTTGAGCTTCTaGTCCTTGAGAGCCTGCTGCAGAGCAAGAATCTCGGCCTTGTGT +
Preference number: 1 (lower is better)
Translates to: SRSLSLSDRLSALSF*SLRACCRARISALC
Trigger: ACACAAGGCCGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGAGCAGAAGCTCAAAGCCGAGAGCCTGTCGGACAAGCTCAACGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp TCTAGTTTCTGCTGTAAGCTCCGGGCGTTCATCTCCAGCATGGCGTaGTTCTTCTCCAGGTCGTTGAGCTTGTCCGACAGGCTCTCGGCT +
Preference number: 1 (lower is better)
Translates to: SSFCCKLRAFISSMA*FFSRSLSLSDRLSA
Trigger: AGCCGAGAGCCTGTCGGACAAGCTCAACGACCTGGAGAAGAAGCACGCCATGCTGGAGATGAACGCCCGGAGCTTACAGCAGAAACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp AGCGCCTCCTGCAGCCCTTGCGTCAGTCTGAAGATGTGGTTCTTCTaGAGGTCCATCTGCTGCTGCAATTTGGCTTGCTCCTCCAGAAGC +
Preference number: 1 (lower is better)
Translates to: SASCSPCVSLKMWFF*RSICCCNLACSSRS
Trigger: GCTTCTGGAGGAGCAAGCCAAATTGCAGCAGCAGATGGACCTGCAGAAGAACCACATCTTCAGACTGACGCAAGGGCTGCAGGAGGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp ACGAACACCCCAAATTCGTGGAAGCACAGCAGGTATTCTTCTCGCTaGCCGGCGCTGTTCGCCTGCACAATGGAGACAGGGAAGCTGTTG +
Preference number: 1 (lower is better)
Translates to: TNTPNSWKHSRYSSR*PALFACTMETGKLL
Trigger: CAACAGCTTCCCTGTCTCCATTGTGCAGGCGAACAGCGCCGGGCAGCGAGAAGAATACCTGCTGTGCTTCCACGAATTTGGGGTGTTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp GGTTTGTTGACAGGTCATCGGGAGGGTCTTGATTTGGTGGGGCTATaGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCA +
Preference number: 1 (lower is better)
Translates to: GLLTGHREGLDLVGL*DGSSTSAEQPREES
Trigger: TGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCACCAAATCAAGACCCTCCCGATGACCTGTCAACAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CCA 90 bp GGAAGCTGGGTGCTAGCAAGTAGAGGGTTCTCCCAGGCCAGCAGGTaGTGTGTGGGTGAGACTCCATCTTCAGGATGTATGGGACATCTG +
Preference number: 1 (lower is better)
Translates to: GSWVLASRGFSQASR*CVGETPSSGCMGHL
Trigger: CAGATGTCCCATACATCCTGAAGATGGAGTCTCACCCACACACCACCTGCTGGCCTGGGAGAACCCTCTACTTGCTAGCACCCAGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp TCCTCCAGAAGCCTCTGTTTGAGCTCCCGCTCTGTCTCTAGTTTCTaGTGTAAGCTCCGGGCGTTCATCTCCAGCATGGCGTGCTTCTTC +
Preference number: 1 (lower is better)
Translates to: SSRSLCLSSRSVSSF*CKLRAFISSMACFF
Trigger: GAAGAAGCACGCCATGCTGGAGATGAACGCCCGGAGCTTACAGCAGAAACTAGAGACAGAGCGGGAGCTCAAACAGAGGCTTCTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp GGGAAGCTGTTGGACGAGGAGGCGAACACAGCAGGTGCCAAGGAATaGTCGTTCTTGTCCAGGAACTCGTCAAGCGTGTACTGCTTCATG +
Preference number: 1 (lower is better)
Translates to: GKLLDEEANTAGAKE*SFLSRNSSSVYCFM
Trigger: CATGAAGCAGTACACGCTTGACGAGTTCCTGGACAAGAACGACCATTCCTTGGCACCTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp CATCGGGCTTTCTCCTTTTCCAGGGCTAGCTTCAGCTCATTGTACTaGAGAGGAACCTGTGTGGGCAAAGCAGGGTCCTCTTTCCGTCGA +
Preference number: 1 (lower is better)
Translates to: HRAFSFSRASFSSLY*RGTCVGKAGSSFRR
Trigger: TCGACGGAAAGAGGACCCTGCTTTGCCCACACAGGTTCCTCTGCAGTACAATGAGCTGAAGCTAGCCCTGGAAAAGGAGAAAGCCCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp TTTCTCAACCCACACTGGCTGATGCTCACTCGAAGTATGGTCACGTaGAGCATCGGCTTCGGCCTTTTCCCTAGAAACTCTCCCACCTGC +
Preference number: 1 (lower is better)
Translates to: FLNPHWLMLTRSMVT*SIGFGLFPRNSPTC
Trigger: GCAGGTGGGAGAGTTTCTAGGGAAAAGGCCGAAGCCGATGCTGCACGTGACCATACTTCGAGTGAGCATCAGCCAGTGTGGGTTGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp TGCTCCTCCAGCATGGTGCATGTCGTCTTCAGAGCCTCCATCGTCTaGTTCTACCATCTATCTGAGGGGTACAACCCAAAGCCAGTCGCA +
Preference number: 1 (lower is better)
Translates to: CSSSMVHVVFRASIV*FYHLSEGYNPKPVA
Trigger: TGCGACTGGCTTTGGGTTGTACCCCTCAGATAGATGGTAGAACCAGACGATGGAGGCTCTGAAGACGACATGCACCATGCTGGAGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 90 bp GTACTTGCTGAGGTTGTCATTGTAGCGGAGGATGACGACTTTGCTTaGCATAGCGGCGCAGATGCACAGGCTGTTCTCGATCTTGCCAGC +
Preference number: 1 (lower is better)
Translates to: VLAEVVIVAEDDDFA*HSGADAQAVLDLAS
Trigger: GCTGGCAAGATCGAGAACAGCCTGTGCATCTGCGCCGCTATGCCAAGCAAAGTCGTCATCCTCCGCTACAATGACAACCTCAGCAAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp AGCCCTTGCGTCAGTCTGAAGATGTGGTTCTTCTGCAGGTCCATCTaGTGCTGCAATTTGGCTTGCTCCTCCAGAAGCCTCTGTTTGAGC +
Preference number: 1 (lower is better)
Translates to: SPCVSLKMWFFCRSI*CCNLACSSRSLCLS
Trigger: GCTCAAACAGAGGCTTCTGGAGGAGCAAGCCAAATTGCAGCAGCAGATGGACCTGCAGAAGAACCACATCTTCAGACTGACGCAAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp TGCTTTTTCAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTTaGCAGGTCATCGGGAGGGTCTTGATTTGGTGGGGCTATGGGATG +
Preference number: 1 (lower is better)
Translates to: CFFSATDCSLLWPVC*QVIGRVLIWWGYGM
Trigger: CATCCCATAGCCCCACCAAATCAAGACCCTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTGAAAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR TCA 90 bp GCTGCTCAGTGCCTGACTCCTTCACGAGGTTTCCTTTGCAGCATATaGCCCTTAACTTGTCCTGGTATGAGGAGGCCAGGTAAATCGCTC +
Preference number: 1 (lower is better)
Translates to: AAQCLTPSRGFLCSI*PLTCPGMRRPGKSL
Trigger: GAGCGATTTACCTGGCCTCCTCATACCAGGACAAGTTAAGGGTCATATGCTGCAAAGGAAACCTCGTGAAGGAGTCAGGCACTGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp CCTCTGTCCAGCTTCTCTGGCTTCATTGTCATAGATGAGGACTTTTaGCCCCTCCAGAACAATGTACTTCCTGTCCCAGCCTTGCTGTCC +
Preference number: 1 (lower is better)
Translates to: PLSSFSGFIVIDEDF*PLQNNVLPVPALLS
Trigger: GGACAGCAAGGCTGGGACAGGAAGTACATTGTTCTGGAGGGGTCAAAAGTCCTCATCTATGACAATGAAGCCAGAGAAGCTGGACAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp AGTTTCAGCAGAGAGTTTCCAAGTAATTTCTCAACCCACACTGGCTaGTGCTCACTCGAAGTATGGTCACGTGCAGCATCGGCTTCGGCC +
Preference number: 1 (lower is better)
Translates to: SFSREFPSNFSTHTG*CSLEVWSRAASASA
Trigger: GGCCGAAGCCGATGCTGCACGTGACCATACTTCGAGTGAGCATCAGCCAGTGTGGGTTGAGAAATTACTTGGAAACTCTCTGCTGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp GATAAGGTTCTCTGTAGGCGAAGGCCAGAGGTAAGCGACTCCACTTaGGATCATCTGTGCGGCTACGTCTTCCGTAAGAATCCACGAACA +
Preference number: 1 (lower is better)
Translates to: DKVLCRRRPEVSDST*DHLCGYVFRKNPRT
Trigger: TGTTCGTGGATTCTTACGGAAGACGTAGCCGCACAGATGATCTCAAGTGGAGTCGCTTACCTCTGGCCTTCGCCTACAGAGAACCTTATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp TCTGCTTTGGCGGTATTTGCAAGTTCTGAAGCACCAACGGCACCATaGATAGATACGTCCCCGTCAGGAAGGCACAGCTCAAATTCTTCC +
Preference number: 1 (lower is better)
Translates to: SALAVFASSEAPTAP*IDTSPSGRHSSNSS
Trigger: GGAAGAATTTGAGCTGTGCCTTCCTGACGGGGACGTATCTATTCATGGTGCCGTTGGTGCTTCAGAACTTGCAAATACCGCCAAAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp CTTCAGGATGTATGGGACATCTGCTTTGGCGGTATTTGCAAGTTCTaGAGCACCAACGGCACCATGAATAGATACGTCCCCGTCAGGAAG +
Preference number: 1 (lower is better)
Translates to: LQDVWDICFGGICKF*STNGTMNRYVPVRK
Trigger: CTTCCTGACGGGGACGTATCTATTCATGGTGCCGTTGGTGCTTCAGAACTTGCAAATACCGCCAAAGCAGATGTCCCATACATCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 90 bp CACTTGTCAGGGCTCAAGGAACCCGTTTCTCGTGGAGGTCCTAAGTaGGATGCCAAGACTGAAGACCAGTTATCAGTGACCATTCCAAAT +
Preference number: 1 (lower is better)
Translates to: HLSGLKEPVSRGGPK*DAKTEDQLSVTIPN
Trigger: ATTTGGAATGGTCACTGATAACTGGTCTTCAGTCTTGGCATCTCACTTAGGACCTCCACGAGAAACGGGTTCCTTGAGCCCTGACAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR TCA 90 bp CGGGCAGGGGGTGCTCTTCTAGCCTACATTTCATTGGCAAAGACCTaGTGGTGTGATCTAGCTAAAAACCACTACAACAGGAAATACATC +
Preference number: 1 (lower is better)
Translates to: RAGGALLAYISLAKT*WCDLAKNHYNRKYI
Trigger: GATGTATTTCCTGTTGTAGTGGTTTTTAGCTAGATCACACCATCAGGTCTTTGCCAATGAAATGTAGGCTAGAAGAGCACCCCCTGCCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR TCA 90 bp AGAGTTCTTCTTATTTATGTGTCTGTGGAGGCCAGTAGATACTGTTaGATCCCTTGGAACTGGAGGTCACAGACTGTGGTGAGCTACCCA +
Preference number: 1 (lower is better)
Translates to: RVLLIYVSVEASRYC*IPWNWRSQTVVSYP
Trigger: TGGGTAGCTCACCACAGTCTGTGACCTCCAGTTCCAAGGGATTCAACAGTATCTACTGGCCTCCACAGACACATAAATAAGAAGAACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 90 bp TTTTGGAGACCTAGAATCTTATTGATGCTAATAGAAGCTTTTGACTaGGATTTCGGGTTACGATTATTTCCTGCTGGCGTCCCGGTGGTC +
Preference number: 1 (lower is better)
Translates to: FWRPRILLMLIEAFD*DFGLRLFPAGVPVV
Trigger: GACCACCGGGACGCCAGCAGGAAATAATCGTAACCCGAAATCGCAGTCAAAAGCTTCTATTAGCATCAATAAGATTCTAGGTCTCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 90 bp GCAGCTCTGTCCGACCCTCTCTGTCTCGGTAGCGGTGCGGTGTGCTaGGCTCTCGGGGGTGGCTGGGGCCTTCCGGTGGCGCCGGGCTGG +
Preference number: 2 (lower is better)
Translates to: AALSDPLCLGSGAVC*ALGGGWGLPVAPGW
Trigger: CCAGCCCGGCGCCACCGGAAGGCCCCAGCCACCCCCGAGAGCCAAGCACACCGCACCGCTACCGAGACAGAGAGGGTCGGACAGAGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp TGCCTCGCAGTGGCTGGCGTAGACGGGTGCGGGTGGTCCGTGGCTTaGCGGTGGGCAGCTTCCTCCCGCGCAGAGCGGAGTTCGATGCGG +
Preference number: 2 (lower is better)
Translates to: CLAVAGVDGCGWSVA*RWAASSRAERSSMR
Trigger: CCGCATCGAACTCCGCTCTGCGCGGGAGGAAGCTGCCCACCGCAAAGCCACGGACCACCCGCACCCGTCTACGCCAGCCACTGCGAGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp TCCGGTGGCGCCGGGCTGGAGGCCACGCGTTTGGTGATGTGCTCGTaGTATGTTGGTGGGCCTCGCTTGTTGGGGCTGCGGGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: SGGAGLEATRLVMCS*YVGGPRLLGLREVE
Trigger: CTCCACCTCCCGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCCTCCAGCCCGGCGCCACCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp GCTCCAGAGGGCGGCCTGGAGACTTGTCCCTGCGCAGCTCTGTCCGACCCTCTCCCGGCGCTGTTCGCCTaGACAATGGAGACAGGGAAG +
Preference number: 2 (lower is better)
Translates to: APEGGLETCPCAALSDPLPALFA*TMETGK
Trigger: CTTCCCTGTCTCCATTGTGCAGGCGAACAGCGCCGG...GAGAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp AGCACATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCAATGCGGGCCGGGCCTaGCCAGGCCAAGCAGGGCCG +
Preference number: 2 (lower is better)
Translates to: STCSYLPCRAPSRVSSSSNAGRA*PGQAGP
Trigger: CGGCCCTGCTTGGCCTGGCCAGGCCCGGCCCGCATT...GGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCATGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR TCA 90 bp TGCCTCGCAGTGGCTGGCGTAGACGGGTGCGGGTGGTCCGTGGCTTTGCGGTGGTCTTCTCCAGGTCGTTaGGCTTGTCCGACAGGCTCT +
Preference number: 2 (lower is better)
Translates to: CLAVAGVDGCGWSVALRWSSPGR*ACPTGS
Trigger: AGAGCCTGTCGGACAAGCTCAACGACCTGGAGAAGA...CCACCGCAAAGCCACGGACCACCCGCACCCGTCTACGCCAGCCACTGCGAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp CCAGAGGGCGGCCTGGAGACTTGTCCCTGCGCAGCTCTGTCCGACCCTCTCTGTGCCCTAGCCCTGCTCTaGTTCTCGGTGTCCAGCATC +
Preference number: 2 (lower is better)
Translates to: PEGGLETCPCAALSDPLCALALL*FSVSSI
Trigger: GATGCTGGACACCGAGAAGCAGAGCAGGGCTAGGGC...ACAGAGAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGCCCTCGGACAGGAAGTaGTGCCCCAGGTCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQPSDRK*CPRSQA
Trigger: GGCCTGGGACCTGGGGCACCACTTCCTGTCCGAGGG...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp CTCCGCCAGGCCTCCCACTGGCGCTCCTTCTCCAGCAGCTCGTCGTTCAGGGCCCCTGCTCCTCCAGCATaGTGCATGTCGTCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: LRQASHWRSFSSSSSFRAPAPPA*CMSSSE
Trigger: CTCTGAAGACGACATGCACCATGCTGGAGGAGCAGG...GGCCCTGAACGACGAGCTGCTGGAGAAGGAGCGCCAGTGGGAGGCCTGGCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp CTGAGCATTCGGCCTGGGGACTTCTCCCGCTCCAGAGGGCGGCCTGGAGACTTGCGGCTTCGAATATGTTaGGGGAGACGTCGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LSIRPGDFSRSRGRPGDLRLRIC*GRRRAG
Trigger: CCCAGCCCGACGTCTCCCCCAACATATTCGAAGCCG...CAAGTCTCCAGGCCGCCCTCTGGAGCGGGAGAAGTCCCCAGGCCGAATGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp GCAGGTGTGACTGCGCCAGGGACTGCTTCACCTTCTTCACGTCCACCAGGCACATCCGTGGCTTTGCGGTaGGCAGCTTCCTCCCGCGCA +
Preference number: 2 (lower is better)
Translates to: AGVTAPGTASPSSRPPGTSVALR*AASSRA
Trigger: TGCGCGGGAGGAAGCTGCCCACCGCAAAGCCACGGA...TGTGCCTGGTGGACGTGAAGAAGGTGAAGCAGTCCCTGGCGCAGTCACACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp TCGCCTGCACAATGGAGACAGGGAAGCTGTTGGACGAGGAGGCGAACACAGCAGGCAGGCTCATGGCACTaGGCTGGTGCTCGGGCGACC +
Preference number: 2 (lower is better)
Translates to: SPAQWRQGSCWTRRRTQQAGSWH*AGARAT
Trigger: GGTCGCCCGAGCACCAGCCCAGTGCCATGAGCCTGC...CTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp CTTGTCCCTGCGCAGCTCTGTCCGACCCTCTCTGTCTCGGTAGCGGTGCGGTGTCCAGGCTCCTTGCTCTaGAGCCCCGGGGAGTTCATT +
Preference number: 2 (lower is better)
Translates to: LVPAQLCPTLSVSVAVRCPGSLL*SPGEFI
Trigger: AATGAACTCCCCGGGGCTCCAGAGCAAGGAGCCTGG...ACACCGCACCGCTACCGAGACAGAGAGGGTCGGACAGAGCTGCGCAGGGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp CGCTGCCCGGCGCTGTTCGCCTGCACAATGGAGACAGGGAAGCTGTaGGACGAGGAGGCGAACACAGCAGGTGCCAAGGAATGGTCGTTC +
Preference number: 2 (lower is better)
Translates to: RCPALFACTMETGKL*DEEANTAGAKEWSF
Trigger: GAACGACCATTCCTTGGCACCTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCGAACAGCGCCGGGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR TCA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAATGGGGGAGGAGAGCTTaGGGTCCCTTGGCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAEWGRRA*GPLAPG
Trigger: ACCTGGGGCCAAGGGACCTCAAGCTCTCCTCCCCCA...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR GCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGCCCAGCTGTGCCGAATaGGGGCCGGGCCTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVPSCAE*GPGLAR
Trigger: CCTGGCCAGGCCCGGCCCGCATTCGGCACAGCTGGG...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR GCA 90 bp CTGCCTCGCAGTGGCTGGCGTAGACGGGTGCGGGTGGTCCGTGGCTTTGCGGTGTCTGTCTCTAGTTTCTaGTGTAAGCTCCGGGCGTTC +
Preference number: 2 (lower is better)
Translates to: LPRSGWRRRVRVVRGFAVSVSSF*CKLRAF
Trigger: GAACGCCCGGAGCTTACAGCAGAAACTAGAGACAGA...CACCGCAAAGCCACGGACCACCCGCACCCGTCTACGCCAGCCACTGCGAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp GGAGGAAATCGCGGGGCCCAGGTAGCGAGGGTTTGGAATTTCCAGATATGCTCGGGGGAGACGTCGGGCTaGGCAGGCAGGTGTGACTGC +
Preference number: 2 (lower is better)
Translates to: GGNRGAQVARVWNFQICSGETSG*AGRCDC
Trigger: GCAGTCACACCTGCCTGCCCAGCCCGACGTCTCCCC...CGAGCATATCTGGAAATTCCAAACCCTCGCTACCTGGGCCCCGCGATTTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR TCA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGAGCAGAGGCCCGACTaGCCCTCCATACATTCTCAG +
Preference number: 2 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVEQRPD*PSIHSQ
Trigger: CTGAGAATGTATGGAGGGTCAGTCGGGCCTCTGCTC...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR GCA 90 bp TGTTGGGGCTGCGGGAGGTGGAGGGCACCCGGTGCTGCTCAGTGCCTGACTCCTTTCTGCAGGTCCATCTaGTGCTGCAATTTGGCTTGC +
Preference number: 2 (lower is better)
Translates to: CWGCGRWRAPGAAQCLTPFCRSI*CCNLAC
Trigger: GCAAGCCAAATTGCAGCAGCAGATGGACCTGCAGAA...AGGAGTCAGGCACTGAGCAGCACCGGGTGCCCTCCACCTCCCGCAGCCCCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp GGAGGAAATCGCGGGGCCCAGGTAGCGAGGGTTTGGAATTTCCAGATATGCTCGGGTGGTCCGTGGCTTTaGGGTGGGCAGCTTCCTCCC +
Preference number: 2 (lower is better)
Translates to: GGNRGAQVARVWNFQICSGGPWL*GGQLPP
Trigger: GGGAGGAAGCTGCCCACCGCAAAGCCACGGACCACC...CGAGCATATCTGGAAATTCCAAACCCTCGCTACCTGGGCCCCGCGATTTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp GCAGCGAACAAGTGGCAGCCTTTGACGGCTTCGAATATGTTGGGGGAGACGTCGGCTGGCGTAGACGGGTaGGGGTGGTCCGTGGCTTTG +
Preference number: 2 (lower is better)
Translates to: AANKWQPLTASNMLGETSAGVDG*GWSVAL
Trigger: CAAAGCCACGGACCACCCGCACCCGTCTACGCCAGC...CGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGCTGCCACTTGTTCGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGGGTGGGGCTATGGGATaGCAGCAGTACATCGGCAGA +
Preference number: 2 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAEGGAMG*QQYIGR
Trigger: TCTGCCGATGTACTGCTGCCATCCCATAGCCCCACC...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp GCCTTTGACGGCTTCGAATATGTTGGGGGAGACGTCGGGCTGGGCAGGCAGGTGGCACAATGGCAGACATaGCGATCTGCTGCCTCGCAG +
Preference number: 2 (lower is better)
Translates to: AFDGFEYVGGDVGLGRQVAQWQT*RSAASQ
Trigger: CTGCGAGGCAGCAGATCGCCATGTCTGCCATTGTGC...CACCTGCCTGCCCAGCCCGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp GCCTTTGACGGCTTCGAATATGTTGGGGGAGACGTCGGGCTGGGCAGGCAGGTGTGTGGCATATTCAGCTaGCAGGCCACAGGTAGCGGG +
Preference number: 2 (lower is better)
Translates to: AFDGFEYVGGDVGLGRQVCGIFS*QATGSG
Trigger: CCCGCTACCTGTGGCCTGCCAGCTGAATATGCCACA...CACCTGCCTGCCCAGCCCGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp AGCTTCTGCTCCTTGAGAGCCTGCTGCAGAGCAAGAATCTCGGCCTaGTGTTCCTTCACCGCCAACTCCACCACCTGGCGCGACTCGGTG +
Preference number: 2 (lower is better)
Translates to: SFCSLRACCRARISA*CSFTANSTTWRDSV
Trigger: CACCGAGTCGCGCCAGGTGGTGGAGTTGGCGGTGAAGGAACACAAGGCCGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGAGCAGAAGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp CACAGGCTGTTCTCGATCTTGCCAGCAGCGAACAAGTGGCAGCCTTaGACGGCTTCGAATATGTTGGGGGAGACGTCGGGCTGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: HRLFSILPAANKWQP*TASNMLGETSGWAG
Trigger: GCCTGCCCAGCCCGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGCTGCCACTTGTTCGCTGCTGGCAAGATCGAGAACAGCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp GGTAAATCGCTCCGGAGGAAATCGCGGGGCCCAGGTAGCGAGGGTTaGGAATTTCCAGATATGCTCGGGCAGGGCTCCCCAGTGAGGATC +
Preference number: 2 (lower is better)
Translates to: GKSLRRKSRGPGSEG*EFPDMLGQGSPVRI
Trigger: GATCCTCACTGGGGAGCCCTGCCCGAGCATATCTGGAAATTCCAAACCCTCGCTACCTGGGCCCCGCGATTTCCTCCGGAGCGATTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp CGCCTGCACAATGGAGACAGGGAAGCTGTTGGACGAGGAGGCGAACACAGCAGGTCCAGGTCCAGGACCTaGTCCTCCAGCATGGTGCAT +
Preference number: 2 (lower is better)
Translates to: RLHNGDREAVGRGGEHSRSRSRT*SSSMVH
Trigger: ATGCACCATGCTGGAGGAGCAGGTCCTGGACCTGGA...CCTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp ATACAGCTGCAGGGCTCTGAGGTCTCGATCTCCTTGCGGATGCAGTACTTGCTGCGGTCCAGCGCCTCCTaGAGCCCTTGCGTCAGTCTG +
Preference number: 2 (lower is better)
Translates to: IQLQGSEVSISLRMQYLLRSSAS*SPCVSL
Trigger: CAGACTGACGCAAGGGCTGCAGGAGGCGCTGGACCG...CAGCAAGTACTGCATCCGCAAGGAGATCGAGACCTCAGAGCCCTGCAGCTGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp CTGAAGGGCAGGGTGCAGTTCATGTCAAGCCGGTCATCGCCCTCCAGTTTCAGCGACATGGCGATCTGCTaGCTCGCAGTGGCTGGCGTA +
Preference number: 2 (lower is better)
Translates to: LKGRVQFMSSRSSPSSFSDMAIC*LAVAGV
Trigger: TACGCCAGCCACTGCGAGGCAGCAGATCGCCATGTC...GCTGAAACTGGAGGGCGATGACCGGCTTGACATGAACTGCACCCTGCCCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp AAGGCCAGAGGTAAGCGACTCCACTTGAGATCATCTGTGCGGCTACGTCTTCCGGCGGTGACCCAGCGCTaGTTGTCGGGGAAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: KARGKRLHLRSSVRLRLPAVTQR*LSGKLG
Trigger: ACCCAGCTTCCCCGACAAGCAGCGCTGGGTCACCGC...CGGAAGACGTAGCCGCACAGATGATCTCAAGTGGAGTCGCTTACCTCTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp GAGGGTTTGGAATTTCCAGATATGCTCGGGCAGGGCTCCCCAGTGAGGATCTGGGCAGGCAGGTGTGACTaGGCCAGGGACTGCTTCACC +
Preference number: 2 (lower is better)
Translates to: EGLEFPDMLGQGSPVRIWAGRCD*ARDCFT
Trigger: GGTGAAGCAGTCCCTGGCGCAGTCACACCTGCCTGC...CCAGATCCTCACTGGGGAGCCCTGCCCGAGCATATCTGGAAATTCCAAACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp AGCACATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCGAGCTTGAGGTCCCTTaGCCCCAGGTCACTGCCTCT +
Preference number: 2 (lower is better)
Translates to: STCSYLPCRAPSRVSSSSELEVP*PQVTAS
Trigger: AGAGGCAGTGACCTGGGGCCAAGGGACCTCAAGCTC...GGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp TGCATGCGCTCTTTCAGACGCCGGCTGAATTCCTCTGGAGTTGACGACTCCTTTCGCCAGGCCTCCCACTaGCGCTCCTTCTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: CMRSFRRRLNSSGVDDSFRQASH*RSFSSS
Trigger: GCTGCTGGAGAAGGAGCGCCAGTGGGAGGCCTGGCG...AAAGGAGTCGTCAACTCCAGAGGAATTCAGCCGGCGTCTGAAAGAGCGCATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp ATACAGCTGCAGGGCTCTGAGGTCTCGATCTCCTTGCGGATGCAGTACTTGCTGGCCAACTCCACCACCTaGCGCGACTCGGTGATCCGC +
Preference number: 2 (lower is better)
Translates to: IQLQGSEVSISLRMQYLLANSTT*RDSVIR
Trigger: GCGGATCACCGAGTCGCGCCAGGTGGTGGAGTTGGC...CAGCAAGTACTGCATCCGCAAGGAGATCGAGACCTCAGAGCCCTGCAGCTGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp AAGGCCAGAGGTAAGCGACTCCACTTGAGATCATCTGTGCGGCTACGTCTTCCGGTAGACGGGTGCGGGTaGTCCGTGGCTTTGCGGTGG +
Preference number: 2 (lower is better)
Translates to: KARGKRLHLRSSVRLRLPVDGCG*SVALRW
Trigger: CCACCGCAAAGCCACGGACCACCCGCACCCGTCTAC...CGGAAGACGTAGCCGCACAGATGATCTCAAGTGGAGTCGCTTACCTCTGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp CCAGAGGGCGGCCTGGAGACTTGTCCCTGCGCAGCTCTGTCCGACCCTCTCTGTAGGCATTTGGATGCCTaGCGTCCAAAGTGCACAGTA +
Preference number: 2 (lower is better)
Translates to: PEGGLETCPCAALSDPLCRHLDA*RPKCTV
Trigger: TACTGTGCACTTTGGACGCCAGGCATCCAAATGCCT...ACAGAGAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR TCA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGCCAGGTCACTGCCTCTaGGCAGAGGCCCGACTGACC +
Preference number: 2 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKPGHCL*AEARLT
Trigger: GGTCAGTCGGGCCTCTGCTCAGAGGCAGTGACCTGG...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR TCA 90 bp CTTGTCCCTGCGCAGCTCTGTCCGACCCTCTCTGTCTCGGTAGCGGTGCGGTGTGCCAGTAGATACTGTTaGATCCCTTGGAACTGGAGG +
Preference number: 2 (lower is better)
Translates to: LVPAQLCPTLSVSVAVRCASRYC*IPWNWR
Trigger: CCTCCAGTTCCAAGGGATTCAACAGTATCTACTGGC...ACACCGCACCGCTACCGAGACAGAGAGGGTCGGACAGAGCTGCGCAGGGACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR TCA 90 bp TTAACTTGTCCTGGTATGAGGAGGCCAGGTAAATCGCTCCGGAGGAAATCGCGGGACTCGGTGATCCGCTaGTCGGCCCTAGCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: LTCPGMRRPGKSLRRKSRDSVIR*SALALL
Trigger: GAGCAGGGCTAGGGCCGATCAGCGGATCACCGAGTC...CCGCGATTTCCTCCGGAGCGATTTACCTGGCCTCCTCATACCAGGACAAGTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR TCA 90 bp GCCTTTGACGGCTTCGAATATGTTGGGGGAGACGTCGGGCTGGGCAGGCAGGTGGAATTCCTCTGGAGTTaGCGACTCCTTTCTGCGGCT +
Preference number: 2 (lower is better)
Translates to: AFDGFEYVGGDVGLGRQVEFLWS*RLLSAA
Trigger: AGCCGCAGAAAGGAGTCGTCAACTCCAGAGGAATTC...CACCTGCCTGCCCAGCCCGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp ATACAGCTGCAGGGCTCTGAGGTCTCGATCTCCTTGCGGATGCAGTACTTGCTGATGGCACTGGGCTGGTaGTCGGGCGACCGCACAATG +
Preference number: 2 (lower is better)
Translates to: IQLQGSEVSISLRMQYLLMALGW*SGDRTM
Trigger: CATTGTGCGGTCGCCCGAGCACCAGCCCAGTGCCAT...CAGCAAGTACTGCATCCGCAAGGAGATCGAGACCTCAGAGCCCTGCAGCTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGGTGCCAAGGACAGTCTaGACCCAGCTGTGCCGAATG +
Preference number: 2 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPEVPRTV*TQLCRM
Trigger: CATTCGGCACAGCTGGGTCCAGACTGTCCTTGGCAC...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGGCTACGATGTCACCCTaGGTAAGACAGGGCCATCTA +
Preference number: 2 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAEATMSP*VRQGHL
Trigger: TAGATGGCCCTGTCTTACCCAGGGTGACATCGTAGC...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp TGTTGGGGCTGCGGGAGGTGGAGGGCACCCGGTGCTGCTCAGTGCCTGACTCCTCCCGTTTGTTATTTCTaGGCACTTTCATCCACCCTT +
Preference number: 2 (lower is better)
Translates to: CWGCGRWRAPGAAQCLTPPVCYF*ALSSTL
Trigger: AAGGGTGGATGAAAGTGCCCAGAAATAACAAACGGG...AGGAGTCAGGCACTGAGCAGCACCGGGTGCCCTCCACCTCCCGCAGCCCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp CCAGAGGGCGGCCTGGAGACTTGTCCCTGCGCAGCTCTGTCCGACCCTCTCTGTCAGGTAGCGAGGGTTTaGAATTTCCAGATATGCTCG +
Preference number: 2 (lower is better)
Translates to: PEGGLETCPCAALSDPLCQVARV*NFQICS
Trigger: CGAGCATATCTGGAAATTCCAAACCCTCGCTACCTG...ACAGAGAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp CCTGTTGTGGCCGGTTTGTTGACAGGTCATCGGGAGGGTCTTGATTaGGTGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCC +
Preference number: 2 (lower is better)
Translates to: PVVAGLLTGHREGLD*VGLWDGSSTSAEQP
Trigger: GGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCACCAAATCAAGACCCTCCCGATGACCTGTCAACAAACCGGCCACAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 90 bp AAGCTGCTGCCAGGCTCCTTGCTCTGGAGCCCCGGGGAGTTCATTTaGTCCCGGCAGAAGGCCTCAGTGAAGTGTGTGGCATATTCAGCT +
Preference number: 2 (lower is better)
Translates to: KLLPGSLLWSPGEFI*SRQKASVKCVAYSA
Trigger: AGCTGAATATGCCACACACTTCACTGAGGCCTTCTGCCGGGACAAAATGAACTCCCCGGGGCTCCAGAGCAAGGAGCCTGGCAGCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR TCA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGATTGTGGCCGGTTTGTTaGCAGGTCATCGGGAGGGTC +
Preference number: 2 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRLWPVC*QVIGRV
Trigger: GACCCTCCCGATGACCTGTCAACAAACCGGCCACAA...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR TCA 90 bp CCAGAGGGCGGCCTGGAGACTTGTCCCTGCGCAGCTCTGTCCGACCCTCTCTGTCTTCATTGTCATAGATaGGGACTTTTGACCCCTCCA +
Preference number: 2 (lower is better)
Translates to: PEGGLETCPCAALSDPLCLHCHR*GLLTPP
Trigger: TGGAGGGGTCAAAAGTCCTCATCTATGACAATGAAG...ACAGAGAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR TCA 90 bp CTGAAGGGCAGGGTGCAGTTCATGTCAAGCCGGTCATCGCCCTCCAGTTTCAGCCAGGTGGTGTGTGGGTaGGACTCCATCTTCAGGATG +
Preference number: 2 (lower is better)
Translates to: LKGRVQFMSSRSSPSSFSQVVCG*DSIFRM
Trigger: CATCCTGAAGATGGAGTCTCACCCACACACCACCTG...GCTGAAACTGGAGGGCGATGACCGGCTTGACATGAACTGCACCCTGCCCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR TCA 90 bp GGAGGAAATCGCGGGGCCCAGGTAGCGAGGGTTTGGAATTTCCAGATATGCTCGGCACTACCTGGTCACTaGAGGGCAGGGTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: GGNRGAQVARVWNFQICSALPGH*RAGCSS
Trigger: TGAACTGCACCCTGCCCTTCAGTGACCAGGTAGTGC...CGAGCATATCTGGAAATTCCAAACCCTCGCTACCTGGGCCCCGCGATTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp CTGAAGGGCAGGGTGCAGTTCATGTCAAGCCGGTCATCGCCCTCCAGTTTCAGCTCCTTGAGAGCCTGCTaGAGAGCAAGAATCTCGGCC +
Preference number: 2 (lower is better)
Translates to: LKGRVQFMSSRSSPSSFSSLRAC*RARISA
Trigger: GGCCGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGA...GCTGAAACTGGAGGGCGATGACCGGCTTGACATGAACTGCACCCTGCCCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp GGAGGAAATCGCGGGGCCCAGGTAGCGAGGGTTTGGAATTTCCAGATATGCTCGGCTTGTCGGGGAAGCTaGGTGCTAGCAAGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: GGNRGAQVARVWNFQICSACRGS*VLASRG
Trigger: CCCTCTACTTGCTAGCACCCAGCTTCCCCGACAAGC...CGAGCATATCTGGAAATTCCAAACCCTCGCTACCTGGGCCCCGCGATTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp GGCACCCGGTGCTGCTCAGTGCCTGACTCCTTCACGAGGTTTCCTTaGCAGCATATGACCCTTAACTTGTCCTGGTATGAGGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GTRCCSVPDSFTRFP*QHMTLNLSWYEEAR
Trigger: CCTGGCCTCCTCATACCAGGACAAGTTAAGGGTCATATGCTGCAAAGGAAACCTCGTGAAGGAGTCAGGCACTGAGCAGCACCGGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR TCA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGATGGGACAAGGATGACTaGAGCTACATGGACACGGGA +
Preference number: 2 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGWDKDD*SYMDTG
Trigger: TCCCGTGTCCATGTAGCTTCAGTCATCCTTGTCCCA...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR GCA 90 bp GCAGGTGTGACTGCGCCAGGGACTGCTTCACCTTCTTCACGTCCACCAGGCACATTCAGCTCATTGTACTaGAGAGGAACCTGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: AGVTAPGTASPSSRPPGTFSSLY*RGTCVG
Trigger: GCCCACACAGGTTCCTCTGCAGTACAATGAGCTGAA...TGTGCCTGGTGGACGTGAAGAAGGTGAAGCAGTCCCTGGCGCAGTCACACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp ATACAGCTGCAGGGCTCTGAGGTCTCGATCTCCTTGCGGATGCAGTACTTGCTGGACTGCGCCAGGGACTaGTTCACCTTCTTCACGTCC +
Preference number: 2 (lower is better)
Translates to: IQLQGSEVSISLRMQYLLDCARD*FTFFTS
Trigger: GGACGTGAAGAAGGTGAAGCAGTCCCTGGCGCAGTC...CAGCAAGTACTGCATCCGCAAGGAGATCGAGACCTCAGAGCCCTGCAGCTGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGTACATTCTCAGCTGGTaGGAAGGGAAGTCGTCAAGG +
Preference number: 2 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQYILSW*EGKSSR
Trigger: CCTTGACGACTTCCCTTCCCACCAGCTGAGAATGTA...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGGCTGGAGAAGCAGGCTaGGTAGATGAGGCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKAGEAG*VDEAEG
Trigger: CCCCTCAGCCTCATCTACCCAGCCTGCTTCTCCAGC...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp TACGATTATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCCACCTGCTGCGGTGGTaGGGACAGGTCTACCTTTCA +
Preference number: 2 (lower is better)
Translates to: YDYFLLASRWSHRRVPHSHLLRW*GQVYLS
Trigger: TGAAAGGTAGACCTGTCCCCACCACCGCAGCAGGTG...GGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAATAATCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp CATGGCACTGGGCTGGTGCTCGGGCGACCGCACAATGGCAGACATGGCGATCTGTTCTTTTTAGCAGGCTaGTCCATTTTGGCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: HGTGLVLGRPHNGRHGDLFFLAG*SILACR
Trigger: CCTGCAAGCCAAAATGGACCAGCCTGCTAAAAAGAA...CAGATCGCCATGTCTGCCATTGTGCGGTCGCCCGAGCACCAGCCCAGTGCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp GAGGGTTTGGAATTTCCAGATATGCTCGGGCAGGGCTCCCCAGTGAGGATCTGGGCAGAGGAACCTGTGTaGGCAAAGCAGGGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: EGLEFPDMLGQGSPVRIWAEEPV*AKQGPL
Trigger: AAGAGGACCCTGCTTTGCCCACACAGGTTCCTCTGC...CCAGATCCTCACTGGGGAGCCCTGCCCGAGCATATCTGGAAATTCCAAACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp CGCCTGCACAATGGAGACAGGGAAGCTGTTGGACGAGGAGGCGAACACAGCAGGGACATTCGAGGCATTTaGATGCCTGGCGTCCAAAGT +
Preference number: 2 (lower is better)
Translates to: RLHNGDREAVGRGGEHSRDIRGI*MPGVQS
Trigger: ACTTTGGACGCCAGGCATCCAAATGCCTCGAATGTC...CCTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp TCGTTGAGCTTGTCCGACAGGCTCTCGGCTTTGAGCTTCTGCTCCTaGAGAGCCTGCTGCAGAGCAAGAATCTCGGCCTTGTGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: SLSLSDRLSALSFCS*RACCRARISALCSF
Trigger: GAAGGAACACAAGGCCGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGAGCAGAAGCTCAAAGCCGAGAGCCTGTCGGACAAGCTCAACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp TGCTTCTTCTCCAGGTCGTTGAGCTTGTCCGACAGGCTCTCGGCTTaGAGCTTCTGCTCCTTGAGAGCCTGCTGCAGAGCAAGAATCTCG +
Preference number: 2 (lower is better)
Translates to: CFFSRSLSLSDRLSA*SFCSLRACCRARIS
Trigger: CGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGAGCAGAAGCTCAAAGCCGAGAGCCTGTCGGACAAGCTCAACGACCTGGAGAAGAAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp TCCGCGCATCGGGCTTTCTCCTTTTCCAGGGCTAGCTTCAGCTCATaGTACTGCAGAGGAACCTGTGTGGGCAAAGCAGGGTCCTCTTTC +
Preference number: 2 (lower is better)
Translates to: SAHRAFSFSRASFSS*YCRGTCVGKAGSSF
Trigger: GAAAGAGGACCCTGCTTTGCCCACACAGGTTCCTCTGCAGTACAATGAGCTGAAGCTAGCCCTGGAAAAGGAGAAAGCCCGATGCGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR TCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCAGGGGCTGGGAGCTTTaGGCTGCGGCTTCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: PKSRGESKAGEALWEIKGRGWEL*AAASLQ
Trigger: TTGGAGAGAAGCCGCAGCTCAAAGCTCCCAGCCCCT...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR TCA 90 bp AAGGCCAGAGGTAAGCGACTCCACTTGAGATCATCTGTGCGGCTACGTCTTCCGGCACCAACGGCACCATaGATAGATACGTCCCCGTCA +
Preference number: 2 (lower is better)
Translates to: KARGKRLHLRSSVRLRLPAPTAP*IDTSPS
Trigger: TGACGGGGACGTATCTATTCATGGTGCCGTTGGTGC...CGGAAGACGTAGCCGCACAGATGATCTCAAGTGGAGTCGCTTACCTCTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR TCA 90 bp GGAGGAAATCGCGGGGCCCAGGTAGCGAGGGTTTGGAATTTCCAGATATGCTCGGTAAGCGACTCCACTTaGGATCATCTGTGCGGCTAC +
Preference number: 2 (lower is better)
Translates to: GGNRGAQVARVWNFQICSVSDST*DHLCGY
Trigger: GTAGCCGCACAGATGATCTCAAGTGGAGTCGCTTAC...CGAGCATATCTGGAAATTCCAAACCCTCGCTACCTGGGCCCCGCGATTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp TACGATTATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCCCAACGGGCAGGGGGTaGTCTTCTAGCCTACATTTC +
Preference number: 2 (lower is better)
Translates to: YDYFLLASRWSHRRVPHSPTGRG*SSSLHF
Trigger: GAAATGTAGGCTAGAAGAGCACCCCCTGCCCGTTGG...GGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAATAATCGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR GCA 90 bp GCTCATTGTACTGCAGAGGAACCTGTGTGGGCAAAGCAGGGTCCTCTTTCCGTCGCTCCTCCAGCATGGTaGATGTCGTCTTCAGAGCCT +
Preference number: 2 (lower is better)
Translates to: AHCTAEEPVWAKQGPLSVAPPAW*MSSSEP
Trigger: AGGCTCTGAAGACGACATGCACCATGCTGGAGGAGC...GACGGAAAGAGGACCCTGCTTTGCCCACACAGGTTCCTCTGCAGTACAATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGGGTTCGAGTCCGGGTTaGTTTCCTTTTGATGAACGG +
Preference number: 2 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPEGSSPG*FPFDER
Trigger: CCGTTCATCAAAAGGAAACCAACCCGGACTCGAACC...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp GAGGGTTTGGAATTTCCAGATATGCTCGGGCAGGGCTCCCCAGTGAGGATCTGGCGTTCATCTCCAGCATaGCGTGCTTCTTCTCCAGGT +
Preference number: 2 (lower is better)
Translates to: EGLEFPDMLGQGSPVRIWRSSPA*RASSPG
Trigger: ACCTGGAGAAGAAGCACGCCATGCTGGAGATGAACG...CCAGATCCTCACTGGGGAGCCCTGCCCGAGCATATCTGGAAATTCCAAACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp CGCCTGCACAATGGAGACAGGGAAGCTGTTGGACGAGGAGGCGAACACAGCAGGTTTCTCAACCCACACTaGCTGATGCTCACTCGAAGT +
Preference number: 2 (lower is better)
Translates to: RLHNGDREAVGRGGEHSRFLNPH*LMLTRS
Trigger: ACTTCGAGTGAGCATCAGCCAGTGTGGGTTGAGAAA...CCTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp GGCCCAACCCCAAGGCCTATGAATGCTAGGCTTGGAGCAAGTCTATaGCACGCTTTCCTGGCCAAAGCTACGCAGAAAGCTGGAGAAGCA +
Preference number: 2 (lower is better)
Translates to: GPTPRPMNARLGASL*HAFLAKATQKAGEA
Trigger: TGCTTCTCCAGCTTTCTGCGTAGCTTTGGCCAGGAAAGCGTGCAATAGACTTGCTCCAAGCCTAGCATTCATAGGCCTTGGGGTTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 90 bp ACTTTGCTTGGCATAGCGGCGCAGATGCACAGGCTGTTCTCGATCTaGCCAGCAGCGAACAAGTGGCAGCCTTTGACGGCTTCGAATATG +
Preference number: 2 (lower is better)
Translates to: TLLGIAAQMHRLFSI*PAANKWQPLTASNM
Trigger: CATATTCGAAGCCGTCAAAGGCTGCCACTTGTTCGCTGCTGGCAAGATCGAGAACAGCCTGTGCATCTGCGCCGCTATGCCAAGCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGACCATACATTCTCAGCTaGTGGGAAGGGAAGTCGTCA +
Preference number: 2 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRPYILS*WEGKSS
Trigger: TGACGACTTCCCTTCCCACCAGCTGAGAATGTATGG...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp TCGTTGAGCTTGTCCGACAGGCTCTCGGCTTTGAGCTTCTGCTCCTTGAGAGCCAGGCCAAGAGCTCATTaGAAGTTCCAGCTAGGTAGG +
Preference number: 2 (lower is better)
Translates to: SLSLSDRLSALSFCSLRARPRAH*KFQLGR
Trigger: CCTACCTAGCTGGAACTTCCAATGAGCTCTTGGCCT...GGCTCTCAAGGAGCAGAAGCTCAAAGCCGAGAGCCTGTCGGACAAGCTCAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR TCA 90 bp CGCCTGCACAATGGAGACAGGGAAGCTGTTGGACGAGGAGGCGAACACAGCAGGATAGATGAGGACTTTTaGCCCCTCCAGAACAATGTA +
Preference number: 2 (lower is better)
Translates to: RLHNGDREAVGRGGEHSRIDEDF*PLQNNV
Trigger: TACATTGTTCTGGAGGGGTCAAAAGTCCTCATCTAT...CCTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp TGCATGCGCTCTTTCAGACGCCGGCTGAATTCCTCTGGAGTTGACGACTCCTTTTGCTCCTTGAGAGCCTaGTGCAGAGCAAGAATCTCG +
Preference number: 2 (lower is better)
Translates to: CMRSFRRRLNSSGVDDSFCSLRA*CRARIS
Trigger: CGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGAGCA...AAAGGAGTCGTCAACTCCAGAGGAATTCAGCCGGCGTCTGAAAGAGCGCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp TTAACTTGTCCTGGTATGAGGAGGCCAGGTAAATCGCTCCGGAGGAAATCGCGGAGGTCCATCTGCTGCTaGAATTTGGCTTGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LTCPGMRRPGKSLRRKSRRSICC*NLACSS
Trigger: GGAGGAGCAAGCCAAATTGCAGCAGCAGATGGACCT...CCGCGATTTCCTCCGGAGCGATTTACCTGGCCTCCTCATACCAGGACAAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGAGCAGGAGAGGCCTTGTaGGAGATTAAAGGCAAAGAT +
Preference number: 2 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRAGEAL*EIKGKD
Trigger: ATCTTTGCCTTTAATCTCCCACAAGGCCTCTCCTGC...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp AATCGCTCCGGAGGAAATCGCGGGGCCCAGGTAGCGAGGGTTTGGAATTTCCAGATGGGACATCTGCTTTaGCGGTATTTGCAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: NRSGGNRGAQVARVWNFQMGHLL*RYLQVL
Trigger: CAGAACTTGCAAATACCGCCAAAGCAGATGTCCCAT...CTGGAAATTCCAAACCCTCGCTACCTGGGCCCCGCGATTTCCTCCGGAGCGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp TGCATGCGCTCTTTCAGACGCCGGCTGAATTCCTCTGGAGTTGACGACTCCTTTAAGATGTGGTTCTTCTaGAGGTCCATCTGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: CMRSFRRRLNSSGVDDSFKMWFF*RSICCC
Trigger: GCAGCAGCAGATGGACCTGCAGAAGAACCACATCTT...AAAGGAGTCGTCAACTCCAGAGGAATTCAGCCGGCGTCTGAAAGAGCGCATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR GCA 90 bp CGCCTGCACAATGGAGACAGGGAAGCTGTTGGACGAGGAGGCGAACACAGCAGGTGGTCCATTTTGGCTTaGAGGAAATCAATGAGTTTG +
Preference number: 2 (lower is better)
Translates to: RLHNGDREAVGRGGEHSRWSILA*RKSMSL
Trigger: CAAACTCATTGATTTCCTGCAAGCCAAAATGGACCA...CCTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCGATTTGGTGGGGCTATaGGATGGCAGCAGTACATCG +
Preference number: 2 (lower is better)
Translates to: PKSRGESKAGEALWEIKGDLVGL*DGSSTS
Trigger: CGATGTACTGCTGCCATCCCATAGCCCCACCAAATC...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGAAGTCACAGTTTCAGTaGGGTAGAACCGTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVKSQFQ*GRTVLG
Trigger: ACCCAGCACGGTTCTACCCCACTGAAACTGTGACTT...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACCAGTCAGATCTGCCCTaGGGGTGGGGGTGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: VSCKYVQSVELALCSRKHQSDLP*GWGWRW
Trigger: CCACCGCCACCCCCACCCCCAGGGCAGATCTGACTG...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 90 bp TTGCTTTTTCAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTaGACAGGTCATCGGGAGGGTCTTGATTTGGTGGGGCTATGGGAT +
Preference number: 2 (lower is better)
Translates to: LLFQCYRLQPVVAGL*TGHREGLDLVGLWD
Trigger: ATCCCATAGCCCCACCAAATCAAGACCCTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTGAAAAAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 90 bp TGTTTGCTTTTTCAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTaGTTGACAGGTCATCGGGAGGGTCTTGATTTGGTGGGGCTATGG +
Preference number: 2 (lower is better)
Translates to: CLLFQCYRLQPVVAG*LTGHREGLDLVGLW
Trigger: CCATAGCCCCACCAAATCAAGACCCTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTGAAAAAGCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR GCA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGTTGGAGCAAGTCTATTaGACGCTTTCCTGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKLEQVY*TLSWPK
Trigger: CTTTGGCCAGGAAAGCGTGCAATAGACTTGCTCCAA...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp TGCATGCGCTCTTTCAGACGCCGGCTGAATTCCTCTGGAGTTGACGACTCCTTTGTCAGTCTGAAGATGTaGTTCTTCTGCAGGTCCATC +
Preference number: 2 (lower is better)
Translates to: CMRSFRRRLNSSGVDDSFVSLKM*FFCRSI
Trigger: GATGGACCTGCAGAAGAACCACATCTTCAGACTGAC...AAAGGAGTCGTCAACTCCAGAGGAATTCAGCCGGCGTCTGAAAGAGCGCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 90 bp AGCAGTAGACTTCCAGCCACGGTTCGAGTCCGGGTTGGTTTCCTTTaGATGAACGGGTTCAGGCTGGAGCTAAGTACAAAAGTCTGTGAA +
Preference number: 2 (lower is better)
Translates to: SSRLPATVRVRVGFL*MNGFRLELSTKVCE
Trigger: TTCACAGACTTTTGTACTTAGCTCCAGCCTGAACCCGTTCATCAAAAGGAAACCAACCCGGACTCGAACCGTGGCTGGAAGTCTACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR TCA 90 bp ATACAGCTGCAGGGCTCTGAGGTCTCGATCTCCTTGCGGATGCAGTACTTGCTGCTTGCAGGAAATCAATaGGTTTGGTTTGCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: IQLQGSEVSISLRMQYLLLAGNQ*VWFAER
Trigger: TCTCTCAGCAAACCAAACTCATTGATTTCCTGCAAG...CAGCAAGTACTGCATCCGCAAGGAGATCGAGACCTCAGAGCCCTGCAGCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCAGAACGGTAAACATTTaGCTACGATGTCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: PKSRGESKAGEALWEIKGRTVNI*LRCHPG
Trigger: CCCAGGGTGACATCGTAGCCAAATGTTTACCGTTCT...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR TCA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGTCATTGGCAAAGACCTaGTGGTGTGATCTAGCTAAA +
Preference number: 2 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKSLAKT*WCDLAK
Trigger: TTTAGCTAGATCACACCATCAGGTCTTTGCCAATGA...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 90 bp AGGCCTTGTGGGAGATTAAAGGCAAAGATAAGGCCTATAGTTAGCTaGCCAACTGTAAAGCCTCTAGTTGGTTGGTTCTATCCGGTTGCC +
Preference number: 2 (lower is better)
Translates to: RPCGRLKAKIRPIVS*PTVKPLVGWFYPVA
Trigger: GGCAACCGGATAGAACCAACCAACTAGAGGCTTTACAGTTGGCAAGCTAACTATAGGCCTTATCTTTGCCTTTAATCTCCCACAAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR GCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACCTGGGAGCTTTGAGCTaGGGCTTCTCTCCAATGTCC +
Preference number: 2 (lower is better)
Translates to: VSCKYVQSVELALCSRKHLGALS*GFSPMS
Trigger: GGACATTGGAGAGAAGCCGCAGCTCAAAGCTCCCAG...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACAGCTACGCAGAAAGCTaGAGAAGCAGGCTGGGTAGA +
Preference number: 2 (lower is better)
Translates to: VSCKYVQSVELALCSRKHSYAES*RSRLGR
Trigger: TCTACCCAGCCTGCTTCTCCAGCTTTCTGCGTAGCT...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR GCA 72 bp CCGTGCCAAGGACAGTCTGGACCCAGCTGTGCCGAATaGGGGCCGGGCCTGGCCAGGCCAAGCAGGGCCGGG +
Preference number: 3 (lower is better)
Translates to: PCQGQSGPSCAE*GPGLARPSRAG
Trigger: CCCGGCCCTGCTTGGCCTGGCCAGGCCCGGCCCGCATTCGGCACAGCTGGGTCCAGACTGTCCTTGGCACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CCA 72 bp CCGACCCTCTCTGTCTCGGTAGCGGTGCGGTGTGCTTaGCTCTCGGGGGTGGCTGGGGCCTTCCGGTGGCGC +
Preference number: 3 (lower is better)
Translates to: PTLSVSVAVRCA*LSGVAGAFRWR
Trigger: GCGCCACCGGAAGGCCCCAGCCACCCCCGAGAGCCAAGCACACCGCACCGCTACCGAGACAGAGAGGGTCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp GCGATCTGCTGCCTCGCAGTGGCTGGCGTAGACGGGTaGGGGTGGTCCGTGGCTTTGCGGTGGGCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: AICCLAVAGVDG*GWSVALRWAAS
Trigger: GGAAGCTGCCCACCGCAAAGCCACGGACCACCCGCACCCGTCTACGCCAGCCACTGCGAGGCAGCAGATCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp CTGTCCGACCCTCTCTGTCTCGGTAGCGGTGCGGTGTaGTTGGCTCTCGGGGGTGGCTGGGGCCTTCCGGTG +
Preference number: 3 (lower is better)
Translates to: LSDPLCLGSGAV*LALGGGWGLPV
Trigger: CACCGGAAGGCCCCAGCCACCCCCGAGAGCCAAGCACACCGCACCGCTACCGAGACAGAGAGGGTCGGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp TTCTCGTCGCCGAGGACGCTCCGCCAGGCCTCCCACTaGCGCTCCTTCTCCAGCAGCTCGTCGTTCAGGGCC +
Preference number: 3 (lower is better)
Translates to: FSSPRTLRQASH*RSFSSSSSFRA
Trigger: GGCCCTGAACGACGAGCTGCTGGAGAAGGAGCGCCAGTGGGAGGCCTGGCGGAGCGTCCTCGGCGACGAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp GGCGTAGACGGGTGCGGGTGGTCCGTGGCTTTGCGGTaGGCAGCTTCCTCCCGCGCAGAGCGGAGTTCGATG +
Preference number: 3 (lower is better)
Translates to: GVDGCGWSVALR*AASSRAERSSM
Trigger: CATCGAACTCCGCTCTGCGCGGGAGGAAGCTGCCCACCGCAAAGCCACGGACCACCCGCACCCGTCTACGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp TCGGCCTGGGGACTTCTCCCGCTCCAGAGGGCGGCCTaGAGACTTGTCCCTGCGCAGCTCTGTCCGACCCTC +
Preference number: 3 (lower is better)
Translates to: SAWGLLPLQRAA*RLVPAQLCPTL
Trigger: GAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGGAGCGGGAGAAGTCCCCAGGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp TCGGGCGACCGCACAATGGCAGACATGGCGATCTGCTaGCTCGCAGTGGCTGGCGTAGACGGGTGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: SGDRTMADMAIC*LAVAGVDGCGW
Trigger: CCACCCGCACCCGTCTACGCCAGCCACTGCGAGGCAGCAGATCGCCATGTCTGCCATTGTGCGGTCGCCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp TGCTCGGGCGACCGCACAATGGCAGACATGGCGATCTaGTGCCTCGCAGTGGCTGGCGTAGACGGGTGCGGG +
Preference number: 3 (lower is better)
Translates to: CSGDRTMADMAI*CLAVAGVDGCG
Trigger: CCCGCACCCGTCTACGCCAGCCACTGCGAGGCAGCAGATCGCCATGTCTGCCATTGTGCGGTCGCCCGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGGTGGGGGAGGAGAGCTaGAGGTCCCTTGGCCCCAGG +
Preference number: 3 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGVGEES*RSLGPR
Trigger: CCTGGGGCCAAGGGACCTCAAGCTCTCCTCCCCCAC...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR TCA 72 bp GCCAACTCCACCACCTGGCGCGACTCGGTGATCCGCTaGTCGGCCCTAGCCCTGCTCTGCTTCTCGGTGTCC +
Preference number: 3 (lower is better)
Translates to: ANSTTWRDSVIR*SALALLCFSVS
Trigger: GGACACCGAGAAGCAGAGCAGGGCTAGGGCCGATCAGCGGATCACCGAGTCGCGCCAGGTGGTGGAGTTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp TCTCCCGCTCCAGAGGGCGGCCTGGAGACTTGTCCCTaGGCAGCTCTGTCCGACCCTCTCTGTCTCGGTAGC +
Preference number: 3 (lower is better)
Translates to: SPAPEGGLETCP*AALSDPLCLGS
Trigger: GCTACCGAGACAGAGAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGGAGCGGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp GGGTCCTCACTGCTCCTGCAGGCAGCCGGCCCCTGCTaGTGTCTTCAAACAGTCTCCCTGGGGACCGCTCTC +
Preference number: 3 (lower is better)
Translates to: GSSLLLQAAGPC*CLQTVSLGTAL
Trigger: GAGAGCGGTCCCCAGGGAGACTGTTTGAAGACAGCAGCAGGGGCCGGCTGCCTGCAGGAGCAGTGAGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp CTGGATGGTGGGGCAAGCAGGCTCATGGCACTGGGCTaGTGCTCGGGCGACCGCACAATGGCAGACATGGCG +
Preference number: 3 (lower is better)
Translates to: LDGGASRLMALG*CSGDRTMADMA
Trigger: CGCCATGTCTGCCATTGTGCGGTCGCCCGAGCACCAGCCCAGTGCCATGAGCCTGCTTGCCCCACCATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp TGCGGCTGGATGGTGGGGCAAGCAGGCTCATGGCACTaGGCTGGTGCTCGGGCGACCGCACAATGGCAGACA +
Preference number: 3 (lower is better)
Translates to: CGWMVGQAGSWH*AGARATAQWQT
Trigger: TGTCTGCCATTGTGCGGTCGCCCGAGCACCAGCCCAGTGCCATGAGCCTGCTTGCCCCACCATCCAGCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp CCTTTCTGCGGCTGGATGGTGGGGCAAGCAGGCTCATaGCACTGGGCTGGTGCTCGGGCGACCGCACAATGG +
Preference number: 3 (lower is better)
Translates to: PFCGWMVGQAGS*HWAGARATAQW
Trigger: CCATTGTGCGGTCGCCCGAGCACCAGCCCAGTGCCATGAGCCTGCTTGCCCCACCATCCAGCCGCAGAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp TGGGGACCGCTCTCTCCTAGTGCTGAGCATTCGGCCTaGGGACTTCTCCCGCTCCAGAGGGCGGCCTGGAGA +
Preference number: 3 (lower is better)
Translates to: WGPLSPSAEHSA*GLLPLQRAAWR
Trigger: TCTCCAGGCCGCCCTCTGGAGCGGGAGAAGTCCCCAGGCCGAATGCTCAGCACTAGGAGAGAGCGGTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp GATGGTGGGGCAAGCAGGCTCATGGCACTGGGCTGGTaGTCGGGCGACCGCACAATGGCAGACATGGCGATC +
Preference number: 3 (lower is better)
Translates to: DGGASRLMALGW*SGDRTMADMAI
Trigger: GATCGCCATGTCTGCCATTGTGCGGTCGCCCGAGCACCAGCCCAGTGCCATGAGCCTGCTTGCCCCACCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp GGTGGCGCCGGGCTGGAGGCCACGCGTTTGGTGATGTaGTCGTTGTATGTTGGTGGGCCTCGCTTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: GGAGLEATRLVM*SLYVGGPRLLG
Trigger: CCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCCTCCAGCCCGGCGCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp AATGGCAGACATGGCGATCTGCTGCCTCGCAGTGGCTaGCGTAGACGGGTGCGGGTGGTCCGTGGCTTTGCG +
Preference number: 3 (lower is better)
Translates to: NGRHGDLLPRSG*RRRVRVVRGFA
Trigger: CGCAAAGCCACGGACCACCCGCACCCGTCTACGCCAGCCACTGCGAGGCAGCAGATCGCCATGTCTGCCATT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp TCATGGCACTGGGCTGGTGCTCGGGCGACCGCACAATaGCAGACATGGCGATCTGCTGCCTCGCAGTGGCTG +
Preference number: 3 (lower is better)
Translates to: SWHWAGARATAQ*QTWRSAASQWL
Trigger: CAGCCACTGCGAGGCAGCAGATCGCCATGTCTGCCATTGTGCGGTCGCCCGAGCACCAGCCCAGTGCCATGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp GCAGGTGTGACTGCGCCAGGGACTGCTTCACCTTCTTCACGTCCACCAGGCACAGGGTGGTCCGTGGCTTaGCGGTGGGCAGCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: AGVTAPGTASPSSRPPGTGWSVA*RWAASS
Trigger: GGAGGAAGCTGCCCACCGCAAAGCCACGGACCACCC...TGTGCCTGGTGGACGTGAAGAAGGTGAAGCAGTCCCTGGCGCAGTCACACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp GCTCCAGAGGGCGGCCTGGAGACTTGTCCCTGCGCAGCTCTGTCCGACCCTCTCAGACACACGGCGCACTaGGTGGCTCTCATGTTCAGG +
Preference number: 3 (lower is better)
Translates to: APEGGLETCPCAALSDPLRHTAH*VALMFR
Trigger: CCTGAACATGAGAGCCACCAAGTGCGCCGTGTGTCT...GAGAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp AGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGAAGTaGCCCTCGGACAGGAAGTGGTGCCCCAGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: SSQSGLLLIPEK*PSDRKWCPRSQ
Trigger: CTGGGACCTGGGGCACCACTTCCTGTCCGAGGGTCACTTCTCTGGGATGAGGAGGAGACCCGACTGGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CCA 72 bp CGCCTAAGAGCCTTGGCTAGCTGCACCCCTTGGAGATaGGGGGTCCGTGCCAAGGACAGTCTGGACCCAGCT +
Preference number: 3 (lower is better)
Translates to: RLRALASCTPWR*GVRAKDSLDPA
Trigger: AGCTGGGTCCAGACTGTCCTTGGCACGGACCCCCCATCTCCAAGGGGTGCAGCTAGCCAAGGCTCTTAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CCA 72 bp GGCCACGCGTTTGGTGATGTGCTCGTTGTATGTTGGTaGGCCTCGCTTGTTGGGGCTGCGGGAGGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: GHAFGDVLVVCW*ASLVGAAGGGG
Trigger: CCCTCCACCTCCCGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp CAGCCGGCCCCTGCTGCTGTCTTCAAACAGTCTCCCTaGGGACCGCTCTCTCCTAGTGCTGAGCATTCGGCC +
Preference number: 3 (lower is better)
Translates to: QPAPAAVFKQSP*GPLSPSAEHSA
Trigger: GGCCGAATGCTCAGCACTAGGAGAGAGCGGTCCCCAGGGAGACTGTTTGAAGACAGCAGCAGGGGCCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp TGGGAAGCGACGTGGACTGTGGACGGACGTGTGGGCTaGAAACACAGACACGGTCACCTGCTGCGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: WEATWTVDGRVG*KHRHGHLLRWW
Trigger: CCACCACCGCAGCAGGTGACCGTGTCTGTGTTTTCAGCCCACACGTCCGTCCACAGTCCACGTCGCTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR GCA 72 bp AGCAGCTCGTCGTTCAGGGCCTCCAGGTCCAGGACCTaGTCCTCCAGCATGGTGCATGTCGTCTTCAGAGCC +
Preference number: 3 (lower is better)
Translates to: SSSSFRASRSRT*SSSMVHVVFRA
Trigger: GGCTCTGAAGACGACATGCACCATGCTGGAGGAGCAGGTCCTGGACCTGGAGGCCCTGAACGACGAGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp AGCAGATCCGCCCGGTCCAGCGCCTCCTGCAGCCCTTaGGTCAGTCTGAAGATGTGGTTCTTCTGCAGGTCC +
Preference number: 3 (lower is better)
Translates to: SRSARSSASCSP*VSLKMWFFCRS
Trigger: GGACCTGCAGAAGAACCACATCTTCAGACTGACGCAAGGGCTGCAGGAGGCGCTGGACCGGGCGGATCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp TTCTGGGCACTTTCATCCACCCTTCCAGGTGCAAGCTaGTGCCAGGCTCCTTGCTCTGGAGCCCCGGGGAGT +
Preference number: 3 (lower is better)
Translates to: FWALSSTLPGAS*CQAPCSGAPGS
Trigger: ACTCCCCGGGGCTCCAGAGCAAGGAGCCTGGCAGCAGCTTGCACCTGGAAGGGTGGATGAAAGTGCCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp GGCTGCGGGAGGTGGAGGGCACCCGGTGCTGCTCAGTaGCTGACTCCTTCACGAGGTTTCCTTTGCAGCATA +
Preference number: 3 (lower is better)
Translates to: GCGRWRAPGAAQ*LTPSRGFLCSI
Trigger: TATGCTGCAAAGGAAACCTCGTGAAGGAGTCAGGCACTGAGCAGCACCGGGTGCCCTCCACCTCCCGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp TTGTTGGGGCTGCGGGAGGTGGAGGGCACCCGGTGCTaGTCAGTGCCTGACTCCTTCACGAGGTTTCCTTTG +
Preference number: 3 (lower is better)
Translates to: LLGLREVEGTRC*SVPDSFTRFPL
Trigger: CAAAGGAAACCTCGTGAAGGAGTCAGGCACTGAGCAGCACCGGGTGCCCTCCACCTCCCGCAGCCCCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp AGCATCCTCTGTAGCTCTCGAACTCGACACTCGAACTaGGACTTCTCGTCGCCGAGGACGCTCCGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: SILCSSRTRHSN*DFSSPRTLRQA
Trigger: GGCCTGGCGGAGCGTCCTCGGCGACGAGAAGTCCCAGTTCGAGTGTCGAGTTCGAGAGCTACAGAGGATGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp TCCGGAGGAAATCGCGGGGCCCAGGTAGCGAGGGTTTaGAATTTCCAGATATGCTCGGGCAGGGCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: SGGNRGAQVARV*NFQICSGRAPQ
Trigger: CTGGGGAGCCCTGCCCGAGCATATCTGGAAATTCCAAACCCTCGCTACCTGGGCCCCGCGATTTCCTCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp GGAGGCCACGCGTTTGGTGATGTGCTCGTTGTATGTTaGTGGGCCTCGCTTGTTGGGGCTGCGGGAGGTGGA +
Preference number: 3 (lower is better)
Translates to: GGHAFGDVLVVC*WASLVGAAGGG
Trigger: TCCACCTCCCGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp GCAGCGAACAAGTGGCAGCCTTTGACGGCTTCGAATATGTTGGGGGAGACGTCGGTGACCCAGCGCTGCTaGTCGGGGAAGCTGGGTGCT +
Preference number: 3 (lower is better)
Translates to: AANKWQPLTASNMLGETSVTQRC*SGKLGA
Trigger: AGCACCCAGCTTCCCCGACAAGCAGCGCTGGGTCAC...CGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGCTGCCACTTGTTCGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp AAGGGGAACTCGCCAGCCTCAAGGGGCTGGGAGCTTTaGGCTGCGGCTTCTCTCCAATGTCCTGGCCTTAGG +
Preference number: 3 (lower is better)
Translates to: KGNSPASRGWEL*AAASLQCPGLR
Trigger: CCTAAGGCCAGGACATTGGAGAGAAGCCGCAGCTCAAAGCTCCCAGCCCCTTGAGGCTGGCGAGTTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CAA 90 bp GGCAGCTTCCTCCCGCGCAGAGCGGAGTTCGATGCGGGTCTTCTGAAGGGCCTCGCTAGCTTCAGCTCATaGTACTGCAGAGGAACCTGT +
Preference number: 3 (lower is better)
Translates to: GSFLPRRAEFDAGLLKGLASFSS*YCRGTC
Trigger: ACAGGTTCCTCTGCAGTACAATGAGCTGAAGCTAGC...GAGGCCCTTCAGAAGACCCGCATCGAACTCCGCTCTGCGCGGGAGGAAGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp CTTGTCCCTGCGCAGCTCTGTCCGACCCTCTCTGTCTCGGTAGCGGTGCGGTGTGGTAAGCGACTCCACTaGAGATCATCTGTGCGGCTA +
Preference number: 3 (lower is better)
Translates to: LVPAQLCPTLSVSVAVRCGKRLH*RSSVRL
Trigger: TAGCCGCACAGATGATCTCAAGTGGAGTCGCTTACC...ACACCGCACCGCTACCGAGACAGAGAGGGTCGGACAGAGCTGCGCAGGGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp GCGCTCTTTCAGACGCCGGCTGAATTCCTCTGGAGTTaGCGACTCCTTTCTGCGGCTGGATGGTGGGGCAAG +
Preference number: 3 (lower is better)
Translates to: ALFQTPAEFLWS*RLLSAAGWWGK
Trigger: CTTGCCCCACCATCCAGCCGCAGAAAGGAGTCGTCAACTCCAGAGGAATTCAGCCGGCGTCTGAAAGAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp AAACTCTCCCACCTGCGACGACAGATTCTAAGGCGGTaGCCCAGCGCTGCTTGTCGGGGAAGCTGGGTGCTA +
Preference number: 3 (lower is better)
Translates to: KLSHLRRQILRR*PSAACRGSWVL
Trigger: TAGCACCCAGCTTCCCCGACAAGCAGCGCTGGGTCACCGCCTTAGAATCTGTCGTCGCAGGTGGGAGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp GTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTaGCTTCGTGGTGGAGGCACGCCTAAGAGTCGAGGA +
Preference number: 3 (lower is better)
Translates to: VGTGLPFSLPRV*LRGGGTPKSRG
Trigger: TCCTCGACTCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR GCA 72 bp GACGTGTGGGCTGAAAACACAGACACGGTCACCTGCTaGGGTGGTGGGGACAGGTCTACCTTTCAGCCTACC +
Preference number: 3 (lower is better)
Translates to: DVWAENTDTVTC*GGGDRSTFQPT
Trigger: GGTAGGCTGAAAGGTAGACCTGTCCCCACCACCGCAGCAGGTGACCGTGTCTGTGTTTTCAGCCCACACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR GCA 72 bp ACGGACGTGTGGGCTGAAAACACAGACACGGTCACCTaGTGCGGTGGTGGGGACAGGTCTACCTTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: TDVWAENTDTVT*CGGGDRSTFQP
Trigger: AGGCTGAAAGGTAGACCTGTCCCCACCACCGCAGCAGGTGACCGTGTCTGTGTTTTCAGCCCACACGTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR GCA 72 bp TCTGTCTTCAGCAGATCCGCCCGGTCCAGCGCCTCCTaGAGCCCTTGCGTCAGTCTGAAGATGTGGTTCTTC +
Preference number: 3 (lower is better)
Translates to: SVFSRSARSSAS*SPCVSLKMWFF
Trigger: GAAGAACCACATCTTCAGACTGACGCAAGGGCTGCAGGAGGCGCTGGACCGGGCGGATCTGCTGAAGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp ATTCTTCTCGCTGCCCGGCGCTGTTCGCCTGCACAATaGAGACAGGGAAGCTGTTGGACGAGGAGGCGAACA +
Preference number: 3 (lower is better)
Translates to: ILLAARRCSPAQ*RQGSCWTRRRT
Trigger: TGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCGAACAGCGCCGGGCAGCGAGAAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGCTTGGAGCAAGTCTATaGCACGCTTTCCTGGCCAAA +
Preference number: 3 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGLGASL*HAFLAK
Trigger: TTTGGCCAGGAAAGCGTGCAATAGACTTGCTCCAAG...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CAA 90 bp GGAGTTGAAGTGAGTCACAAACAGATAAGGTTCTCTGTAGGCGAAGGCCAGAGGCTGCTGCCAGGCTCCTaGCTCTGGAGCCCCGGGGAG +
Preference number: 3 (lower is better)
Translates to: GVEVSHKQIRFSVGEGQRLLPGS*LWSPGE
Trigger: CTCCCCGGGGCTCCAGAGCAAGGAGCCTGGCAGCAG...CCTCTGGCCTTCGCCTACAGAGAACCTTATCTGTTTGTGACTCACTTCAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGAGAACGGTAAACATTaGGCTACGATGTCACCCTGG +
Preference number: 3 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVENGKH*ATMSPW
Trigger: CCAGGGTGACATCGTAGCCAAATGTTTACCGTTCTC...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CAA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAAGCACACAGTCGTCCTaGAAGTCAGCAGGGAACTGG +
Preference number: 3 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGSTQSS*KSAGNW
Trigger: CCAGTTCCCTGCTGACTTCAAGGACGACTGTGTGCT...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CAA 90 bp CTGAAGGGCAGGGTGCAGTTCATGTCAAGCCGGTCATCGCCCTCCAGTTTCAGCGACAGGCTCTCGGCTTaGAGCTTCTGCTCCTTGAGA +
Preference number: 3 (lower is better)
Translates to: LKGRVQFMSSRSSPSSFSDRLSA*SFCSLR
Trigger: TCTCAAGGAGCAGAAGCTCAAAGCCGAGAGCCTGTC...GCTGAAACTGGAGGGCGATGACCGGCTTGACATGAACTGCACCCTGCCCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp CCGGGGAGTTCATTTTGTCCCGGCAGAAGGCCTCAGTaGAGTGTGTGGCATATTCAGCTGGCAGGCCACAGG +
Preference number: 3 (lower is better)
Translates to: PGSSFCPGRRPQ*SVWHIQLAGHR
Trigger: CCTGTGGCCTGCCAGCTGAATATGCCACACACTTCACTGAGGCCTTCTGCCGGGACAAAATGAACTCCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp TGCTGTAAGCTCCGGGCGTTCATCTCCAGCATGGCGTaGTTCTTCTCCAGGTCGTTGAGCTTGTCCGACAGG +
Preference number: 3 (lower is better)
Translates to: CCKLRAFISSMA*FFSRSLSLSDR
Trigger: CCTGTCGGACAAGCTCAACGACCTGGAGAAGAAGCACGCCATGCTGGAGATGAACGCCCGGAGCTTACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp CCAAATTCGTGGAAGCACAGCAGGTATTCTTCTCGCTaGCCGGCGCTGTTCGCCTGCACAATGGAGACAGGG +
Preference number: 3 (lower is better)
Translates to: PNSWKHSRYSSR*PALFACTMETG
Trigger: CCCTGTCTCCATTGTGCAGGCGAACAGCGCCGGGCAGCGAGAAGAATACCTGCTGTGCTTCCACGAATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp ACAGGTCATCGGGAGGGTCTTGATTTGGTGGGGCTATaGGATGGCAGCAGTACATCGGCAGAGCAACCCAGG +
Preference number: 3 (lower is better)
Translates to: TGHREGLDLVGL*DGSSTSAEQPR
Trigger: CCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCACCAAATCAAGACCCTCCCGATGACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CCA 72 bp GCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTaGGAAGCGACGTGGACTGTGGACGGACGTGTGGGC +
Preference number: 3 (lower is better)
Translates to: AGRSLHLGQVVI*EATWTVDGRVG
Trigger: GCCCACACGTCCGTCCACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CCA 72 bp CGCTGTTCGCCTGCACAATGGAGACAGGGAAGCTGTTaGACGAGGAGGCGAACACAGCAGGTGCCAAGGAAT +
Preference number: 3 (lower is better)
Translates to: RCSPAQWRQGSC*TRRRTQQVPRN
Trigger: ATTCCTTGGCACCTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCGAACAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp CTTCAGAGCCTCCATCGTCTGGTTCTACCATCTATCTaGGGGGTACAACCCAAAGCCAGTCGCAGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: LQSLHRLVLPSI*GVQPKASRRGG
Trigger: CCCTCCCCTGCGACTGGCTTTGGGTTGTACCCCTCAGATAGATGGTAGAACCAGACGATGGAGGCTCTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp TCTCGATCTTGCCAGCAGCGAACAAGTGGCAGCCTTTaGCGGCTTCGAATATGTTGGGGGAGACGTCGGGCT +
Preference number: 3 (lower is better)
Translates to: SRSCQQRTSGSL*RLRICWGRRRA
Trigger: AGCCCGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGCTGCCACTTGTTCGCTGCTGGCAAGATCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp AAACTCCCAGCACCGAGGAGAAGGCCAAGAGCTCATTaGAAGTTCCAGCTAGGTAGGGCCACAGAGTGGGAC +
Preference number: 3 (lower is better)
Translates to: KLPAPRRRPRAH*KFQLGRATEWD
Trigger: GTCCCACTCTGTGGCCCTACCTAGCTGGAACTTCCAATGAGCTCTTGGCCTTCTCCTCGGTGCTGGGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp AGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTTaGCAGGTCATCGGGAGGGTCTTGATTTGGTGGGGC +
Preference number: 3 (lower is better)
Translates to: SATDCSLLWPVC*QVIGRVLIWWG
Trigger: GCCCCACCAAATCAAGACCCTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR GCA 72 bp CTCTCGGCTTTGAGCTTCTGCTCCTTGAGAGCCTGCTaGAGAGCAAGAATCTCGGCCTTGTGTTCCTTCACC +
Preference number: 3 (lower is better)
Translates to: LSALSFCSLRAC*RARISALCSFT
Trigger: GGTGAAGGAACACAAGGCCGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGAGCAGAAGCTCAAAGCCGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp AGGCTCTCGGCTTTGAGCTTCTGCTCCTTGAGAGCCTaGTGCAGAGCAAGAATCTCGGCCTTGTGTTCCTTC +
Preference number: 3 (lower is better)
Translates to: RLSALSFCSLRA*CRARISALCSF
Trigger: GAAGGAACACAAGGCCGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGAGCAGAAGCTCAAAGCCGAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp TTGAGCTTGTCCGACAGGCTCTCGGCTTTGAGCTTCTaGTCCTTGAGAGCCTGCTGCAGAGCAAGAATCTCG +
Preference number: 3 (lower is better)
Translates to: LSLSDRLSALSF*SLRACCRARIS
Trigger: CGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGAGCAGAAGCTCAAAGCCGAGAGCCTGTCGGACAAGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp GTGCTAGCAAGTAGAGGGTTCTCCCAGGCCAGCAGGTaGTGTGTGGGTGAGACTCCATCTTCAGGATGTATG +
Preference number: 3 (lower is better)
Translates to: VLASRGFSQASR*CVGETPSSGCM
Trigger: CATACATCCTGAAGATGGAGTCTCACCCACACACCACCTGCTGGCCTGGGAGAACCCTCTACTTGCTAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp TTGGACGAGGAGGCGAACACAGCAGGTGCCAAGGAATaGTCGTTCTTGTCCAGGAACTCGTCAAGCGTGTAC +
Preference number: 3 (lower is better)
Translates to: LDEEANTAGAKE*SFLSRNSSSVY
Trigger: GTACACGCTTGACGAGTTCCTGGACAAGAACGACCATTCCTTGGCACCTGCTGTGTTCGCCTCCTCGTCCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp GCCTTTGACGGCTTCGAATATGTTGGGGGAGACGTCGGGCTGGGCAGGCAGGTGATCAATGAGTTTGGTTaGCTGAGAGATTGTGCCTTC +
Preference number: 3 (lower is better)
Translates to: AFDGFEYVGGDVGLGRQVINEFG*LRDCAF
Trigger: GAAGGCACAATCTCTCAGCAAACCAAACTCATTGAT...CACCTGCCTGCCCAGCCCGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp GCTGTAGTTGGTGAAGTGGATACAGCTGCAGGGCTCTaGGGTCTCGATCTCCTTGCGGATGCAGTACTTGCT +
Preference number: 3 (lower is better)
Translates to: AVVGEVDTAAGL*GLDLLADAVLA
Trigger: AGCAAGTACTGCATCCGCAAGGAGATCGAGACCTCAGAGCCCTGCAGCTGTATCCACTTCACCAACTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp CCACACTGGCTGATGCTCACTCGAAGTATGGTCACGTaGAGCATCGGCTTCGGCCTTTTCCCTAGAAACTCT +
Preference number: 3 (lower is better)
Translates to: PHWLMLTRSMVT*SIGFGLFPRNS
Trigger: AGAGTTTCTAGGGAAAAGGCCGAAGCCGATGCTGCACGTGACCATACTTCGAGTGAGCATCAGCCAGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp GAGGTTGTCATTGTAGCGGAGGATGACGACTTTGCTTaGCATAGCGGCGCAGATGCACAGGCTGTTCTCGAT +
Preference number: 3 (lower is better)
Translates to: EVVIVAEDDDFA*HSGADAQAVLD
Trigger: ATCGAGAACAGCCTGTGCATCTGCGCCGCTATGCCAAGCAAAGTCGTCATCCTCCGCTACAATGACAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp CGCCTGCACAATGGAGACAGGGAAGCTGTTGGACGAGGAGGCGAACACAGCAGGTGGTTTGCTGAGAGATaGTGCCTTCCATTTTCACTT +
Preference number: 3 (lower is better)
Translates to: RLHNGDREAVGRGGEHSRWFAER*CLPFSL
Trigger: AAGTGAAAATGGAAGGCACAATCTCTCAGCAAACCA...CCTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp ATACAGCTGCAGGGCTCTGAGGTCTCGATCTCCTTGCGGATGCAGTACTTGCTGGGGGTGACACATCACTaGACATTCGAGGCATTTGGA +
Preference number: 3 (lower is better)
Translates to: IQLQGSEVSISLRMQYLLGVTHH*TFEAFG
Trigger: TCCAAATGCCTCGAATGTCAAGTGATGTGTCACCCC...CAGCAAGTACTGCATCCGCAAGGAGATCGAGACCTCAGAGCCCTGCAGCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp GGGCTCAAGGAACCCGTTTCTCGTGGAGGTCCTAAGTaGGATGCCAAGACTGAAGACCAGTTATCAGTGACC +
Preference number: 3 (lower is better)
Translates to: GLKEPVSRGGPK*DAKTEDQLSVT
Trigger: GGTCACTGATAACTGGTCTTCAGTCTTGGCATCTCACTTAGGACCTCCACGAGAAACGGGTTCCTTGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR TCA 72 bp GCGGTATTTGCAAGTTCTGAAGCACCAACGGCACCATaGATAGATACGTCCCCGTCAGGAAGGCACAGCTCA +
Preference number: 3 (lower is better)
Translates to: AVFASSEAPTAP*IDTSPSGRHSS
Trigger: TGAGCTGTGCCTTCCTGACGGGGACGTATCTATTCATGGTGCCGTTGGTGCTTCAGAACTTGCAAATACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp CTCTGTAGGCGAAGGCCAGAGGTAAGCGACTCCACTTaGGATCATCTGTGCGGCTACGTCTTCCGTAAGAAT +
Preference number: 3 (lower is better)
Translates to: LCRRRPEVSDST*DHLCGYVFRKN
Trigger: ATTCTTACGGAAGACGTAGCCGCACAGATGATCTCAAGTGGAGTCGCTTACCTCTGGCCTTCGCCTACAGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp GTCAGTCTGAAGATGTGGTTCTTCTGCAGGTCCATCTaGTGCTGCAATTTGGCTTGCTCCTCCAGAAGCCTC +
Preference number: 3 (lower is better)
Translates to: VSLKMWFFCRSI*CCNLACSSRSL
Trigger: GAGGCTTCTGGAGGAGCAAGCCAAATTGCAGCAGCAGATGGACCTGCAGAAGAACCACATCTTCAGACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp TTCTCCTTTTCCAGGGCTAGCTTCAGCTCATTGTACTaGAGAGGAACCTGTGTGGGCAAAGCAGGGTCCTCT +
Preference number: 3 (lower is better)
Translates to: FSFSRASFSSLY*RGTCVGKAGSS
Trigger: AGAGGACCCTGCTTTGCCCACACAGGTTCCTCTGCAGTACAATGAGCTGAAGCTAGCCCTGGAAAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp ATGCTAGGCTTGGAGCAAGTCTATTGCACGCTTTCCTaGCCAAAGCTACGCAGAAAGCTGGAGAAGCAGGCT +
Preference number: 3 (lower is better)
Translates to: MLGLEQVYCTLS*PKLRRKLEKQA
Trigger: AGCCTGCTTCTCCAGCTTTCTGCGTAGCTTTGGCCAGGAAAGCGTGCAATAGACTTGCTCCAAGCCTAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CCA 72 bp CTGGGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTaGGTTTTGTGTGAGCACACAGTCGTCCTTGAAGTC +
Preference number: 3 (lower is better)
Translates to: LGSHSFSGVEPC*VLCEHTVVLEV
Trigger: GACTTCAAGGACGACTGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR-3UTR CAA 90 bp GGAGTTGAAGTGAGTCACAAACAGATAAGGTTCTCTGTAGGCGAAGGCCAGAGGTCCAGAAGCCTCTGTTaGAGCTCCCGCTCTGTCTCT +
Preference number: 3 (lower is better)
Translates to: GVEVSHKQIRFSVGEGQRSRSLC*SSRSVS
Trigger: AGAGACAGAGCGGGAGCTCAAACAGAGGCTTCTGGA...CCTCTGGCCTTCGCCTACAGAGAACCTTATCTGTTTGTGACTCACTTCAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp CTGAAGGGCAGGGTGCAGTTCATGTCAAGCCGGTCATCGCCCTCCAGTTTCAGCCTGGTCCATTTTGGCTaGCAGGAAATCAATGAGTTT +
Preference number: 3 (lower is better)
Translates to: LKGRVQFMSSRSSPSSFSLVHFG*QEINEF
Trigger: AAACTCATTGATTTCCTGCAAGCCAAAATGGACCAG...GCTGAAACTGGAGGGCGATGACCGGCTTGACATGAACTGCACCCTGCCCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp GCAGCGAACAAGTGGCAGCCTTTGACGGCTTCGAATATGTTGGGGGAGACGTCGCTTGATGATGTAAATTaGGAAGACTGCGCCAATCCC +
Preference number: 3 (lower is better)
Translates to: AANKWQPLTASNMLGETSLDDVN*EDCANP
Trigger: GGGATTGGCGCAGTCTTCCAAATTTACATCATCAAG...CGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGCTGCCACTTGTTCGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp ATACAGCTGCAGGGCTCTGAGGTCTCGATCTCCTTGCGGATGCAGTACTTGCTGAACAAGTGGCAGCCTTaGACGGCTTCGAATATGTTG +
Preference number: 3 (lower is better)
Translates to: IQLQGSEVSISLRMQYLLNKWQP*TASNML
Trigger: CAACATATTCGAAGCCGTCAAAGGCTGCCACTTGTT...CAGCAAGTACTGCATCCGCAAGGAGATCGAGACCTCAGAGCCCTGCAGCTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp TGCCTGACTCCTTCACGAGGTTTCCTTTGCAGCATATaGCCCTTAACTTGTCCTGGTATGAGGAGGCCAGGT +
Preference number: 3 (lower is better)
Translates to: CLTPSRGFLCSI*PLTCPGMRRPG
Trigger: ACCTGGCCTCCTCATACCAGGACAAGTTAAGGGTCATATGCTGCAAAGGAAACCTCGTGAAGGAGTCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp CATCTGGGAAGTCACAGTTTCAGTGGGGTAGAACCGTaGTGGGTTTTGTGTGAGCACACAGTCGTCCTTGAA +
Preference number: 3 (lower is better)
Translates to: HLGSHSFSGVEP*WVLCEHTVVLE
Trigger: TTCAAGGACGACTGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR GCA 72 bp AGTCTGAAGATGTGGTTCTTCTGCAGGTCCATCTGCTaGTGCAATTTGGCTTGCTCCTCCAGAAGCCTCTGT +
Preference number: 3 (lower is better)
Translates to: SLKMWFFCRSIC*CNLACSSRSLC
Trigger: ACAGAGGCTTCTGGAGGAGCAAGCCAAATTGCAGCAGCAGATGGACCTGCAGAAGAACCACATCTTCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp GACCCCTCCAGAACAATGTACTTCCTGTCCCAGCCTTaGTGTCCCCGTTTGTTATTTCTGGGCACTTTCATC +
Preference number: 3 (lower is better)
Translates to: DPSRTMYFLSQP*CPRLLFLGTFI
Trigger: GATGAAAGTGCCCAGAAATAACAAACGGGGACAGCAAGGCTGGGACAGGAAGTACATTGTTCTGGAGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CCA 72 bp AGCAACACAGAAAACACAACAGCAGGGCACGGGATGTaGAGGGTCACAGGCGTCTCAAACAAGAAAGCACTT +
Preference number: 3 (lower is better)
Translates to: SNTENTTAGHGM*RVTGVSNKKAL
Trigger: AAGTGCTTTCTTGTTTGAGACGCCTGTGACCCTCCACATCCCGTGCCCTGCTGTTGTGTTTTCTGTGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CCA 72 bp TTGTTCAACAACAGAGCCATCCCTCTCAGGTGGATCTaGAATTGCCCATGTGTGCCCATGTGTTCTCCTCGT +
Preference number: 3 (lower is better)
Translates to: LFNNRAIPLRWI*NCPCVPMCSPR
Trigger: ACGAGGAGAACACATGGGCACACATGGGCAATTCCAGATCCACCTGAGAGGGATGGCTCTGTTGTTGAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CCA 72 bp AGCATGGTGCATGTCGTCTTCAGAGCCTCCATCGTCTaGTTCTACCATCTATCTGAGGGGTACAACCCAAAG +
Preference number: 3 (lower is better)
Translates to: SMVHVVFRASIV*FYHLSEGYNPK
Trigger: CTTTGGGTTGTACCCCTCAGATAGATGGTAGAACCAGACGATGGAGGCTCTGAAGACGACATGCACCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR-3UTR CAA 90 bp GGAAGACTGCGCCAATCCCTGGGATGTGGGTTAAGGAGTTTTTCAAGACATTCACTTCCTGTCCCAGCCTaGCTGTCCCCGTTTGTTATT +
Preference number: 3 (lower is better)
Translates to: GRLRQSLGCGLRSFSRHSLPVPA*LSPFVI
Trigger: AATAACAAACGGGGACAGCAAGGCTGGGACAGGAAG...TGAATGTCTTGAAAAACTCCTTAACCCACATCCCAGGGATTGGCGCAGTCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp GTATGGGACATCTGCTTTGGCGGTATTTGCAAGTTCTaGAGCACCAACGGCACCATGAATAGATACGTCCCC +
Preference number: 3 (lower is better)
Translates to: VWDICFGGICKF*STNGTMNRYVP
Trigger: GGGGACGTATCTATTCATGGTGCCGTTGGTGCTTCAGAACTTGCAAATACCGCCAAAGCAGATGTCCCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp GCCTCTGTCCAGCTTCTCTGGCTTCATTGTCATAGATaGGGACTTTTGACCCCTCCAGAACAATGTACTTCC +
Preference number: 3 (lower is better)
Translates to: ASVQLLWLHCHR*GLLTPPEQCTS
Trigger: GGAAGTACATTGTTCTGGAGGGGTCAAAAGTCCTCATCTATGACAATGAAGCCAGAGAAGCTGGACAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp AGAGAGTTTCCAAGTAATTTCTCAACCCACACTGGCTaGTGCTCACTCGAAGTATGGTCACGTGCAGCATCG +
Preference number: 3 (lower is better)
Translates to: REFPSNFSTHTG*CSLEVWSRAAS
Trigger: CGATGCTGCACGTGACCATACTTCGAGTGAGCATCAGCCAGTGTGGGTTGAGAAATTACTTGGAAACTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR TCA 72 bp CTTATTTATGTGTCTGTGGAGGCCAGTAGATACTGTTaGATCCCTTGGAACTGGAGGTCACAGACTGTGGTG +
Preference number: 3 (lower is better)
Translates to: LIYVSVEASRYC*IPWNWRSQTVV
Trigger: CACCACAGTCTGTGACCTCCAGTTCCAAGGGATTCAACAGTATCTACTGGCCTCCACAGACACATAAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR GCA 72 bp CCTAGAATCTTATTGATGCTAATAGAAGCTTTTGACTaGGATTTCGGGTTACGATTATTTCCTGCTGGCGTC +
Preference number: 3 (lower is better)
Translates to: PRILLMLIEAFD*DFGLRLFPAGV
Trigger: GACGCCAGCAGGAAATAATCGTAACCCGAAATCGCAGTCAAAAGCTTCTATTAGCATCAATAAGATTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CCA 72 bp ATCTGCTTTAAAGAGTTCTTCTTATTTATGTGTCTGTaGAGGCCAGTAGATACTGTTGAATCCCTTGGAACT +
Preference number: 3 (lower is better)
Translates to: ICFKEFFLFMCL*RPVDTVESLGT
Trigger: AGTTCCAAGGGATTCAACAGTATCTACTGGCCTCCACAGACACATAAATAAGAAGAACTCTTTAAAGCAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 72 bp GTGGCTGGCGTAGACGGGTGCGGGTGGTCCGTGGCTTaGCGGTGGGCAGCTTCCTCCCGCGCAGAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: VAGVDGCGWSVA*RWAASSRAERS
Trigger: ACTCCGCTCTGCGCGGGAGGAAGCTGCCCACCGCAAAGCCACGGACCACCCGCACCCGTCTACGCCAGCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
CDS-3UTR TCA 90 bp GTCTGGACCCAGCTGTGCCGAATGCGGGCCGGGCCTGGCCAGGCCAAGCAGGGCCTCATCTCCTCCACCTaGGCCTGGTACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VWTQLCRMRAGPGQAKQGLISST*AWYSCS
Trigger: GGAGCAGGAGTACCAGGCTCAGGTGGAGGAGATGAG...GCCCTGCTTGGCCTGGCCAGGCCCGGCCCGCATTCGGCACAGCTGGGTCCAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GTCTGGACCCAGCTGTGCCGAATGCGGGCCGGGCCTGGCCAGGCCAAGCAGGGCGCACTACCTGGTCACTaGAGGGCAGGGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: VWTQLCRMRAGPGQAKQGALPGH*RAGCSS
Trigger: TGAACTGCACCCTGCCCTTCAGTGACCAGGTAGTGC...GCCCTGCTTGGCCTGGCCAGGCCCGGCCCGCATTCGGCACAGCTGGGTCCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GTCTGGACCCAGCTGTGCCGAATGCGGGCCGGGCCTGGCCAGGCCAAGCAGGGCGTGCTGCTCAGTGCCTaGCTCCTTCACGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: VWTQLCRMRAGPGQAKQGVLLSA*LLHEVS
Trigger: GGAAACCTCGTGAAGGAGTCAGGCACTGAGCAGCAC...GCCCTGCTTGGCCTGGCCAGGCCCGGCCCGCATTCGGCACAGCTGGGTCCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GTCTGGACCCAGCTGTGCCGAATGCGGGCCGGGCCTGGCCAGGCCAAGCAGGGCCAGAGCGGAGTTCGATaGGGGTCTTCTGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VWTQLCRMRAGPGQAKQGQSGVR*GSSEGP
Trigger: AGGCCCTTCAGAAGACCCGCATCGAACTCCGCTCTG...GCCCTGCTTGGCCTGGCCAGGCCCGGCCCGCATTCGGCACAGCTGGGTCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGCAGTGGGGTCCTCACTaGTCCTGCAGGCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGQWGPH*SCRQPA
Trigger: GGCCGGCTGCCTGCAGGAGCAGTGAGGACCCCACTG...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGTTCGCCTGGCGGAGCTaGCTCTCCAGCGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAEFAWRS*LSSAAR
Trigger: CCGGGCAGCGCTGGAGAGCCAGCTCCGCCAGGCGAA...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGGTGGGCCTCGCTTGTTaGGGCTGCTGCGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGVGLAC*GCCGRW
Trigger: CCACCTCCCGCAGCAGCCCCAACAAGCGAGGCCCAC...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTACTTGGCTCTCGGGGGTaGCTGGGGCCTTCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVLGSRG*LGPSGG
Trigger: GCCACCGGAAGGCCCCAGCCACCCCCGAGAGCCAAG...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGCGGTGCGGTGTGCTTaGCTCTCGGGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVAVRCA*LSGVAG
Trigger: CCCAGCCACCCCCGAGAGCCAAGCACACCGCACCGC...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp GGGGACTTCTCCCGCTCCAGAGGGCGGCCTGGAGACTaGTCCCTGCGCAGCTCTGTCCGACCCTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GDFSRSRGRPGD*SLRSSVRPSLS
Trigger: AGACAGAGAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGGAGCGGGAGAAGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 72 bp GTGATGTGCTCGTTGTATGTTGGTGGGCCTCGCTTGTaGGGGCTGCGGGAGGTGGAGGGCACCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VMCSLYVGGPRL*GLREVEGTRCC
Trigger: GCAGCACCGGGTGCCCTCCACCTCCCGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 72 bp GCCGGGCTGGAGGCCACGCGTTTGGTGATGTGCTCGTaGTATGTTGGTGGGCCTCGCTTGTTGGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: AGLEATRLVMCS*YVGGPRLLGLR
Trigger: CCGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCCTCCAGCCCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
CDS-3UTR TCA 90 bp TTCTGCGGCTGGATGGTGGGGCAAGCAGGCTCATGGCACTGGGCTGGTGCTCGGTTTGCTTCTGGCTGGTaGGCTGCATCTCCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: FCGWMVGQAGSWHWAGARFASGW*AASPAP
Trigger: CGGAGCGGGAGATGCAGCTCACCAGCCAGAAGCAAA...CCGAGCACCAGCCCAGTGCCATGAGCCTGCTTGCCCCACCATCCAGCCGCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
CDS-3UTR GCA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGGAGGGCACCCGGTGCTaGTCAGTGCCTGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGEGTRC*SVPDSF
Trigger: GAAGGAGTCAGGCACTGAGCAGCACCGGGTGCCCTC...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGGTGCGGGTGGTCCGTaGCTTTGCGGTGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVGAGGP*LCGGQL
Trigger: AAGCTGCCCACCGCAAAGCCACGGACCACCCGCACC...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp TTGGTGATGTGCTCGTTGTATGTTGGTGGGCCTCGCTaGTTGGGGCTGCGGGAGGTGGAGGGCACCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LVMCSLYVGGPR*LGLREVEGTRC
Trigger: GCACCGGGTGCCCTCCACCTCCCGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
CDS-3UTR TCA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGCATCTCCCGCTCCGTaGTCTCACGGCGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVASPAP*SHGGDG
Trigger: ACCATCTCCGCCGTGAGATCACGGAGCGGGAGATGC...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGCAGATTCTAAGGCGGTaGCCCAGCGCTGCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGQILRR*PSAACR
Trigger: CCGACAAGCAGCGCTGGGTCACCGCCTTAGAATCTG...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGACAGCTGCAGGGCTCTaGGGTCTCGATCTCCTTGCG +
Preference number: 4 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGTAAGL*GLDLLA
Trigger: CGCAAGGAGATCGAGACCTCAGAGCCCTGCAGCTGT...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGCTGGGCGGACGGGTGCTGGGGTCCCCTGTGGTGGAGACTCAGAGCGCGGTGTTTCTGCAGGTCCATCTaGTGCTGCAATTTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GWADGCWGPLWWRLRARCFCRSI*CCNLAC
Trigger: GCAAGCCAAATTGCAGCAGCAGATGGACCTGCAGAA...ACACCGCGCTCTGAGTCTCCACCACAGGGGACCCCAGCACCCGTCCGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAATGCAGGGCCGTCAGCTaGGACTCGCGCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAECRAVS*DSRSCR
Trigger: CCTGCAGGAGCGCGAGTCCCAGCTGACGGCCCTGCA...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAACGCCAGGCCTCCCACTaGCGCTCCTTCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAERQASH*RSFSSS
Trigger: GCTGCTGGAGAAGGAGCGCCAGTGGGAGGCCTGGCG...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGTCCCAGGCCAGCAGGTaGTGTGTGGGTGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGSQASR*CVGETP
Trigger: TGGAGTCTCACCCACACACCACCTGCTGGCCTGGGA...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGGGGGAGACGTCGGGCTaGGCAGGCAGGTGTGACTGC +
Preference number: 4 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPEGETSG*AGRCDC
Trigger: GCAGTCACACCTGCCTGCCCAGCCCGACGTCTCCCC...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGAGGCTGCTGCGGGAGGTaGAGGGCACCCGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRGCCGR*RAPGAA
Trigger: AGCAGCACCGGGTGCCCTCCACCTCCCGCAGCAGCC...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GCTCCAGAGGGCGGCCTGGAGACTTGTCCCTGCGCAGCTCTGTCCGACCCTCTCCACACCCTTTGCTTCTaGCTGGTGAGCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: APEGGLETCPCAALSDPLHTLCF*LVSCIS
Trigger: GGAGATGCAGCTCACCAGCCAGAAGCAAAGGGTGTG...GAGAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
CDS-3UTR TCA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGTGTCATCGTCAGACTTaGGGGTGGGGACGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAECHRQT*GWGRRG
Trigger: CCCCCTTCGTCCCCACCCTCAAGTCTGACGATGACA...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GGCTGGGCGGACGGGTGCTGGGGTCCCCTGTGGTGGAGACTCAGAGCGCGGTGTGCTGCTGCTCAGCATTaGTCTTCTCCAGTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: GWADGCWGPLWWRLRARCAAAQH*SSPVWN
Trigger: ATTCCAAACTGGAGAAGATCAATGCTGAGCAGCAGC...ACACCGCGCTCTGAGTCTCCACCACAGGGGACCCCAGCACCCGTCCGCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGGCTGGCGTAGACGGGTaGGGGTGGTCCGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPEAGVDG*GWSVAL
Trigger: CAAAGCCACGGACCACCCGCACCCGTCTACGCCAGC...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGACATGGCGATCTaGTGCCTCGCAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQADMAI*CLAVAG
Trigger: GCCAGCCACTGCGAGGCAGCAGATCGCCATGTCTGC...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGTTGTTCTCCAGGGAGTaGCGGCGTTCCTCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAELFSRE*RRSSAS
Trigger: GGAAGCCGAGGAACGCCGCCACTCCCTGGAGAACAA...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGTTGTCCTCGGTGAGCTaGTTCAGCTGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGLSSVS*FSCSSR
Trigger: CCTGGAGGAGCAGCTGAACCAGCTCACCGAGGACAA...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp AGCACATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCGTAGACGGGTGCGGGTaGTCCGTGGCTTTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: STCSYLPCRAPSRVSSSSVDGCG*SVALRW
Trigger: CCACCGCAAAGCCACGGACCACCCGCACCCGTCTAC...GGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCATGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGACTCCAGAGGGCGGCCTaGAGACTTGTCCCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGLQRAA*RLVPAQ
Trigger: CTGCGCAGGGACAAGTCTCCAGGCCGCCCTCTGGAG...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp CTCCGGAGGAAATCGCGGGGCCCAGGTAGCGAGGGTTaGGAATTTCCAGATATGCTCGGGCAGGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LRRKSRGPGSEG*EFPDMLGQGSP
Trigger: TGGGGAGCCCTGCCCGAGCATATCTGGAAATTCCAAACCCTCGCTACCTGGGCCCCGCGATTTCCTCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
CDS-3UTR TCA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGCCTCGTGCTCCAGGCTaGCCTCCCTCAGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQPRAPG*PPSALF
Trigger: AAACAAGGCTGAGGGAGGTCAGCCTGGAGCACGAGG...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp CTGAAGGGCAGGGTGCAGTTCATGTCAAGCCGGTCATCGCCCTCCAGTTTCAGCGCATCTCCCGCTCCGTaGTCTCACGGCGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: LKGRVQFMSSRSSPSSFSASPAP*SHGGDG
Trigger: ACCATCTCCGCCGTGAGATCACGGAGCGGGAGATGC...GCTGAAACTGGAGGGCGATGACCGGCTTGACATGAACTGCACCCTGCCCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
CDS-3UTR TCA 90 bp GGCTGGGCGGACGGGTGCTGGGGTCCCCTGTGGTGGAGACTCAGAGCGCGGTGTCTTCATTGTCATAGATaGGGACTTTTGACCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GWADGCWGPLWWRLRARCLHCHR*GLLTPP
Trigger: TGGAGGGGTCAAAAGTCCTCATCTATGACAATGAAG...ACACCGCGCTCTGAGTCTCCACCACAGGGGACCCCAGCACCCGTCCGCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAATGGCACTGGGCTGGTaGTCGGGCGACCGCACAATG +
Preference number: 4 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGMALGW*SGDRTM
Trigger: CATTGTGCGGTCGCCCGAGCACCAGCCCAGTGCCAT...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGATCCACCCTTCCAGGTaGAAGCTGCTGCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQIHPSR*KLLPGS
Trigger: GGAGCCTGGCAGCAGCTTGCACCTGGAAGGGTGGAT...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGCTGGCAAAGAAAGGGTaGCAGCAGAGACCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGLAKKG*QQRPSN
Trigger: GTTCGAGGGTCTCTGCTGCCACCCTTTCTTTGCCAG...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp CCAGGCTCCTTGCTCTGGAGCCCCGGGGAGTTCATTTaGTCCCGGCAGAAGGCCTCAGTGAAGTGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PGSLLWSPGEFI*SRQKASVKCVA
Trigger: TGCCACACACTTCACTGAGGCCTTCTGCCGGGACAAAATGAACTCCCCGGGGCTCCAGAGCAAGGAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 72 bp GCGAACAAGTGGCAGCCTTTGACGGCTTCGAATATGTaGGGGGAGACGTCGGGCTGGGCAGGCAGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ANKWQPLTASNM*GETSGWAGRCD
Trigger: GTCACACCTGCCTGCCCAGCCCGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGCTGCCACTTGTTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
CDS-3UTR TCA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGTCTGCTGTTGAGTCATaGGGGGCGGTTTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQSAVES*GAVSPG
Trigger: TCCAGGGGAAACCGCCCCTCATGACTCAACAGCAGA...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGACGGCGTTGTCCTCGGTaGGCTGGTTCAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRRRCPR*AGSAAP
Trigger: AGGAGCAGCTGAACCAGCTCACCGAGGACAACGCCG...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGATTTGCTTCTGGCTGGTaGGCTGCATCTCCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGFASGW*AASPAP
Trigger: CGGAGCGGGAGATGCAGCTCACCAGCCAGAAGCAAA...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGGCACCAACGGCACCATaGATAGATACGTCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAEAPTAP*IDTSPS
Trigger: TGACGGGGACGTATCTATTCATGGTGCCGTTGGTGC...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGCTCGGTGGCCTCTGTaGTGGCTTTTACAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVARWPL*WLLQPS
Trigger: AGAAGGCTGTAAAAGCCAGCACAGAGGCCACCGAGC...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTTGACAGGTCATCGGGAGTGGGACTCGCGCTCCTaGAGGGACAGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QCYRLQPVVAGLLTGHREWDSRS*RDSCSS
Trigger: GGAGCTGCAGCTGTCCCTGCAGGAGCGCGAGTCCCA...CTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp TACGATTATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGTGGTCCGTGGCTTTaGGGTGGGCAGCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: YDYFLLASRWSHRRVPHSGGPWL*GGQLPP
Trigger: GGGAGGAAGCTGCCCACCGCAAAGCCACGGACCACC...GGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAATAATCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGCCCGGTGCTGCTCAGTaGCTGACTCCTTCACGAGGT +
Preference number: 4 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPEPGAAQ*LTPSRG
Trigger: ACCTCGTGAAGGAGTCAGGCACTGAGCAGCACCGGG...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGCAGCCGGCCCCTGCTaGTGTCTTCAAACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGAAGPC*CLQTVS
Trigger: GGAGACTGTTTGAAGACAGCAGCAGGGGCCGGCTGC...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTTGACAGGTCATCGGGAGCTCATGGCACTGGGCTaGTGCTCGGGCGACCGCACA +
Preference number: 4 (lower is better)
Translates to: QCYRLQPVVAGLLTGHRELMALG*CSGDRT
Trigger: TGTGCGGTCGCCCGAGCACCAGCCCAGTGCCATGAG...CTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGCCCACCAGCACTACCTaGTCACTGAAGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPEPTSTT*SLKGRV
Trigger: CACCCTGCCCTTCAGTGACCAGGTAGTGCTGGTGGG...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGGCAGGTGCCAAGGAATaGTCGTTCTTGTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGAGAKE*SFLSRN
Trigger: GTTCCTGGACAAGAACGACCATTCCTTGGCACCTGC...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp TCCTTGAGAGCCTGCTGCAGAGCAAGAATCTCGGCCTaGTGTTCCTTCACCGCCAACTCCACCACCTGGCGC +
Preference number: 4 (lower is better)
Translates to: SLRACCRARISA*CSFTANSTTWR
Trigger: GCGCCAGGTGGTGGAGTTGGCGGTGAAGGAACACAAGGCCGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 72 bp GCGCTGTTCGCCTGCACAATGGAGACAGGGAAGCTGTaGGACGAGGAGGCGAACACAGCAGGTGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: ALFACTMETGKL*DEEANTAGAKE
Trigger: TTCCTTGGCACCTGCTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTCCATTGTGCAGGCGAACAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
CDS-3UTR TCA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGCAAAATCCACCAGCTTaGTGTGTCCCGTCCGGTCGA +
Preference number: 4 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQQNPPA*CVPSGR
Trigger: TCGACCGGACGGGACACATCAAGCTGGTGGATTTTG...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACCGGCAGCTCTTCGCCTaGGAAGCCCGAGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDRQLFA*EARGAQ
Trigger: CTGAGCCCCTCGGGCTTCTCAGGCGAAGAGCTGCCG...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGAGCTCCACCTCCTTCTaGCTAAGCACAGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPESSTSF*LSTAST
Trigger: GGTGGAGGCTGTGCTTAGTCAGAAGGAGGTGGAGCT...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAATGGAGCTTCCGGCTCTaGTCTCGGATGTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAEWSFRL*SRMSWR
Trigger: TCTCCACGACATCCGAGAGCAGAGCCGGAAGCTCCA...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAAGAGATCGCTGCGTCTaGGGGCTGACACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGRDRCV*GLTPGL
Trigger: AAGACCTGGTGTCAGCCCGCAGACGCAGCGATCTCT...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAATTCTGGCTGGTGAGCTaGATCTCCCGCTCCGTGATC +
Preference number: 4 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAEFWLVS*ISRSVI
Trigger: GATCACGGAGCGGGAGATGCAGCTCACCAGCCAGAA...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGCTGGGCGGACGGGTGCTGGGGTCCCCTGTGGTGGAGACTCAGAGCGCGGTGTTGGTCCATTTTGGCTTaGAGGAAATCAATGAGTTTG +
Preference number: 4 (lower is better)
Translates to: GWADGCWGPLWWRLRARCWSILA*RKSMSL
Trigger: CAAACTCATTGATTTCCTGCAAGCCAAAATGGACCA...ACACCGCGCTCTGAGTCTCCACCACAGGGGACCCCAGCACCCGTCCGCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGACCGGCGCTGTTCGCCTaGACAATGGAGACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRPALFA*TMETGK
Trigger: CTTCCCTGTCTCCATTGTGCAGGCGAACAGCGCCGG...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGGTCCTCACTGCTCCTaGAGGCAGCCGGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDGPHCS*RQPAPA
Trigger: AGCAGGGGCCGGCTGCCTGCAGGAGCAGTGAGGACC...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCGCCTGGAGGCCCGACTaGCAATGGGCTCGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PKSRGESKAGEALWEIKGAWRPD*QWARRH
Trigger: GTGCCTCCGAGCCCATTGCCAGTCGGGCCTCCAGGC...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGTTCATCAGGGCGGGTTaGCTGCACTCTTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGFIRAG*LHSSKR
Trigger: TCTCTTTGAAGAGTGCAGCCAACCCGCCCTGATGAA...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGTGTTCCAGTCCGTTCTaGCAAAGAAAGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAECSSPF*QRKGGS
Trigger: GCTGCCACCCTTTCTTTGCCAGAACGGACTGGAACA...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGCTTTGTCATCCTCCTaGGACACCTCCATCCGCGCT +
Preference number: 4 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGALSSS*DTSIRA
Trigger: AGCGCGGATGGAGGTGTCCCAGGAGGATGACAAAGC...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTATTCTCCAGCTTCTCCTaGAGCTCCTGGATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVFSSFS*SSWIFS
Trigger: GCTGAAGATCCAGGAGCTCCAGGAGAAGCTGGAGAA...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGCGTTCATCTCCAGCATaGCGTGCTTCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAERSSPA*RASSPG
Trigger: ACCTGGAGAAGAAGCACGCCATGCTGGAGATGAACG...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAGCAGGCTCATGGCACTaGGCTGGTGCTCGGGCGACC +
Preference number: 4 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTAGSWH*AGARAT
Trigger: GGTCGCCCGAGCACCAGCCCAGTGCCATGAGCCTGC...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp AGCACATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCGCAGACATCTGCTGTTaGGTCATGAGGGGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: STCSYLPCRAPSRVSSSSADICC*VMRGGF
Trigger: GAAACCGCCCCTCATGACTCAACAGCAGATGTCTGC...GGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCATGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGTGCACTTCAGCGAAGTaGCCACAGCCCACAAGGCTT +
Preference number: 4 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPECTSAK*PQPTRL
Trigger: AAGCCTTGTGGGCTGTGGTCACTTCGCTGAAGTGCA...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGACTCGGTGATCCGCTaGTCGGCCCTAGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDDSVIR*SALALL
Trigger: GAGCAGGGCTAGGGCCGATCAGCGGATCACCGAGTC...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp AGCACATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCTCTTCTCCAGGTCGTTaGGCTTGTCCGACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: STCSYLPCRAPSRVSSSSSSPGR*ACPTGS
Trigger: AGAGCCTGTCGGACAAGCTCAACGACCTGGAGAAGA...GGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCATGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGTCGATGCGGGTCTTCTaGAGGGCCTCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVSMRVF*RASSSS
Trigger: GGAGCTGGAGGAGGCCCTTCAGAAGACCCGCATCGA...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTGGGGGTGCTGACATTCGTTTaGCTTCCGCTTGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: QYIGRATQGGVRQVGVVGVLTFV*LPLEFL
Trigger: GAGGAATTCAAGCGGAAGGCAAACGAATGTCAGCAC...CCCCACTACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGAGTGAGCTGGTTCAGCTaGTCCTCCAGGTCGGTGATG +
Preference number: 4 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRVSWFS*SSRSVM
Trigger: CATCACCGACCTGGAGGAGCAGCTGAACCAGCTCAC...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAACCTCACTCCGCAGCTaGACAATCTCGTCATTGGCC +
Preference number: 4 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGTSLRS*TISSLA
Trigger: GGCCAATGACGAGATTGTGCAGCTGCGGAGTGAGGT...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAGCTCCTCCAGCATGGTaGATGTCGTCTTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAEAPPAW*MSSSEP
Trigger: AGGCTCTGAAGACGACATGCACCATGCTGGAGGAGC...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp TACGATTATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGACATGGCGATCTGCTaGCTCGCAGTGGCTGGCGTA +
Preference number: 4 (lower is better)
Translates to: YDYFLLASRWSHRRVPHSDMAIC*LAVAGV
Trigger: TACGCCAGCCACTGCGAGGCAGCAGATCGCCATGTC...GGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAATAATCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAGCCTGGCGTCCAAAGTaGACAGTATCCAGACACACG +
Preference number: 4 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAEAWRPK*TVSRHT
Trigger: CGTGTGTCTGGATACTGTGCACTTTGGACGCCAGGC...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCGCGGTGACCCAGCGCTaGTTGTCGGGGAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PKSRGESKAGEALWEIKGAVTQR*LSGKLG
Trigger: ACCCAGCTTCCCCGACAAGCAGCGCTGGGTCACCGC...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGACCTGCTCCTCCAGCATaGTGCATGTCGTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGPAPPA*CMSSSE
Trigger: CTCTGAAGACGACATGCACCATGCTGGAGGAGCAGG...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCGCCAACTCCACCACCTaGCGCGACTCGGTGATCCGC +
Preference number: 4 (lower is better)
Translates to: PKSRGESKAGEALWEIKGANSTT*RDSVIR
Trigger: GCGGATCACCGAGTCGCGCCAGGTGGTGGAGTTGGC...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGAGCAGGTGGAGCATTTaGGGTGACACATCACTTGAC +
Preference number: 4 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAESRWSI*GDTSLD
Trigger: GTCAAGTGATGTGTCACCCCAAATGCTCCACCTGCT...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp AGCACATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCAGACAGGGAAGCTGTTaGACGAGGAGGCGAACACAG +
Preference number: 4 (lower is better)
Translates to: STCSYLPCRAPSRVSSSSRQGSC*TRRRTQ
Trigger: CTGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCT...GGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCATGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp TCCAGGTCGTTGAGCTTGTCCGACAGGCTCTCGGCTTaGAGCTTCTGCTCCTTGAGAGCCTGCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SRSLSLSDRLSA*SFCSLRACCRA
Trigger: TGCTCTGCAGCAGGCTCTCAAGGAGCAGAAGCTCAAAGCCGAGAGCCTGTCGGACAAGCTCAACGACCTGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
CDS-3UTR TCA 90 bp CAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTTGACAGGTCATCGGGAGTCGCCTTCTGCTCGCTaGGGATCTTGCCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: QCYRLQPVVAGLLTGHRESPSAR*GSCPSR
Trigger: ACGAGAAGGGCAAGATCCTCAGCGAGCAGAAGGCGA...CTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGAGAAGTTTTGGTTGTTaGGCTCGGCGTTGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPERSFGC*ARRCPR
Trigger: CCGAGGACAACGCCGAGCTCAACAACCAAAACTTCT...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGACAGGTGGTGTGTGGGTaGGACTCCATCTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRQVVCG*DSIFRM
Trigger: CATCCTGAAGATGGAGTCTCACCCACACACCACCTG...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CTTGCCAGCAGCGAACAAGTGGCAGCCTTTGACGGCTTCGAATATGTTGGGGGATTCTGGCTGGTGAGCTaGATCTCCCGCTCCGTGATC +
Preference number: 4 (lower is better)
Translates to: LASSEQVAAFDGFEYVGGFWLVS*ISRSVI
Trigger: GATCACGGAGCGGGAGATGCAGCTCACCAGCCAGAA...TCCCCCAACATATTCGAAGCCGTCAAAGGCTGCCACTTGTTCGCTGCTGGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
CDS-3UTR GCA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGGCCCTAGCCCTGCTCTaGTTCTCGGTGTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKALALL*FSVSSI
Trigger: GATGCTGGACACCGAGAAGCAGAGCAGGGCTAGGGC...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGTTCCTGTCCCAGCCTTaGTGTCCCCGTTTGTTATTT +
Preference number: 4 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAEFLSQP*CPRLLF
Trigger: AAATAACAAACGGGGACAGCAAGGCTGGGACAGGAA...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGCAGGCAGGTGTGACTaGGCCAGGGACTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDAGRCD*ARDCFT
Trigger: GGTGAAGCAGTCCCTGGCGCAGTCACACCTGCCTGC...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGTTCTCCTGGAGCTCCTaGATCTTCAGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPEFSWSS*IFSCCS
Trigger: TGAGCAGCAGCTGAAGATCCAGGAGCTCCAGGAGAA...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGAGATCATCTCTTCCTaGGCCTTCATGTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQEIISS*AFMFLW
Trigger: CCAGAGGAACATGAAGGCCCAGGAAGAGATGATCTC...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGATCCATCGTTTGCTTCTaGCTGGTGAGCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGSIVCF*LVSCIS
Trigger: GGAGATGCAGCTCACCAGCCAGAAGCAAACGATGGA...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGTCAGTCTGAAGATGTaGTTCTTCTGCAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVVSLKM*FFCRSI
Trigger: GATGGACCTGCAGAAGAACCACATCTTCAGACTGAC...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCTCTGCGGCTGGATGGTaGGGCAAGCAGGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: PKSRGESKAGEALWEIKGSAAGW*GKQAHG
Trigger: GCCATGAGCCTGCTTGCCCCACCATCCAGCCGCAGA...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGCCAGGCTCCTTGCTCTaGAGCCCCGGGGAGTTCATT +
Preference number: 4 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKPGSLL*SPGEFI
Trigger: AATGAACTCCCCGGGGCTCCAGAGCAAGGAGCCTGG...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGCGGCTTCGAATATGTTaGGGGAGACGTCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVRLRIC*GRRRAG
Trigger: CCCAGCCCGACGTCTCCCCCAACATATTCGAAGCCG...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGACTCGTTGTATGTTGGTaGGCCTCGCTTGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRLVVCW*ASLVGA
Trigger: AGCCCCAACAAGCGAGGCCCACCAACATACAACGAG...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp GCCGGTTTGTTGACAGGTCATCGGGAGGGTCTTGATTaGGTGGGGCTATGGGATGGCAGCAGTACATCGGCA +
Preference number: 4 (lower is better)
Translates to: AGLLTGHREGLD*VGLWDGSSTSA
Trigger: TGCCGATGTACTGCTGCCATCCCATAGCCCCACCAAATCAAGACCCTCCCGATGACCTGTCAACAAACCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp TTGTCCGACAGGCTCTCGGCTTTGAGCTTCTGCTCCTaGAGAGCCTGCTGCAGAGCAAGAATCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSDRLSALSFCS*RACCRARISAL
Trigger: CAAGGCCGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGAGCAGAAGCTCAAAGCCGAGAGCCTGTCGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
3UTR CAA 72 bp TTCTCGATCTTGCCAGCAGCGAACAAGTGGCAGCCTTaGACGGCTTCGAATATGTTGGGGGAGACGTCGGGC +
Preference number: 4 (lower is better)
Translates to: FSILPAANKWQP*TASNMLGETSG
Trigger: GCCCGACGTCTCCCCCAACATATTCGAAGCCGTCAAAGGCTGCCACTTGTTCGCTGCTGGCAAGATCGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000123736.2
CDS-3UTR TCA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGATCATGTTCCTCTGGGTaGAGAGACTGCTGTTTGCCG +
Preference number: 4 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRSCSSG*RDCCLP
Trigger: CGGCAAACAGCAGTCTCTTCACCCAGAGGAACATGA...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGAAGGCCACGCGTTTGGTaGTGTGCTCGTTGTATGTTG +
Preference number: 4 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRRPRVW*CARCML
Trigger: CAACATACAACGAGCACATCACCAAACGCGTGGCCT...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAACCACCTCTGACACTCTaGGATGTAACCGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAEPPLTL*DVTGSF
Trigger: AAATGACCCGGTTACATCGCAGAGTGTCAGAGGTGG...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGACCTCCATCCGCGCTTaGTCCAAACTTCGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPETSIRA*SKLRFK
Trigger: CTTAAAGCGAAGTTTGGAGCAAGCGCGGATGGAGGT...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGCCTGGCGGATATTCTaGAGGAGCTCGGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDAWRIF*RSSVAS
Trigger: AGAGGCCACCGAGCTCCTGCAGAATATCCGCCAGGC...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGTCCAGGTCCAGGACCTaGTCCTCCAGCATGGTGCAT +
Preference number: 4 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKSRSRT*SSSMVH
Trigger: ATGCACCATGCTGGAGGAGCAGGTCCTGGACCTGGA...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGGACTGCGCCAGGGACTaGTTCACCTTCTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVDCARD*FTFFTS
Trigger: GGACGTGAAGAAGGTGAAGCAGTCCCTGGCGCAGTC...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCCAGGCAGCCGGCCCCTaGTGCTGTCTTCAAACAGTC +
Preference number: 4 (lower is better)
Translates to: PKSRGESKAGEALWEIKGQAAGP*CCLQTV
Trigger: GACTGTTTGAAGACAGCAGCAGGGGCCGGCTGCCTG...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGTGTCGGAATACTTCTaGACAAAGCTGCTCACGTGC +
Preference number: 4 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGVSEYF*TKLLTC
Trigger: GCACGTGAGCAGCTTTGTCCAGAAGTATTCCGACAC...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCCCCGAGGGGCTCAGCTaGCACACAGAGGATGAAACC +
Preference number: 4 (lower is better)
Translates to: PKSRGESKAGEALWEIKGPEGLS*HTEDET
Trigger: GGTTTCATCCTCTGTGTGCCAGCTGAGCCCCTCGGG...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTTGACAGGTCATCGGGAGTCTGCAGGAGCTCGGTaGCCTCTGTGCTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: QCYRLQPVVAGLLTGHRESAGAR*PLCWLL
Trigger: TAAAAGCCAGCACAGAGGCCACCGAGCTCCTGCAGA...CTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGATCTTGCCCTTCTCGTaGGCCTCCTCCTCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKILPFS*ASSSCL
Trigger: GAGACACGAGGAGGAGGCCCACGAGAAGGGCAAGAT...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGGCACAATGGCAGACATaGCGATCTGCTGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVAQWQT*RSAASQ
Trigger: CTGCGAGGCAGCAGATCGCCATGTCTGCCATTGTGC...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACCGGGCGACCGCACAATaGCAGACATGGCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDRATAQ*QTWRSA
Trigger: AGCAGATCGCCATGTCTGCCATTGTGCGGTCGCCCG...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp AGCACATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCAGGCATTTGGATGCCTaGCGTCCAAAGTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: STCSYLPCRAPSRVSSSSRHLDA*RPKCTV
Trigger: TACTGTGCACTTTGGACGCCAGGCATCCAAATGCCT...GGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCATGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAATGGGACATCTGCTTTaGCGGTATTTGCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVMGHLL*RYLQVL
Trigger: CAGAACTTGCAAATACCGCCAAAGCAGATGTCCCAT...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGGTTAACCTGGGACAGTaGGGTCCTCACTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVVNLGQ*GPHCSC
Trigger: GCAGGAGCAGTGAGGACCCCACTGTCCCAGGTTAAC...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp CAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTaGACAGGTCATCGGGAGGGTCTTGATTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QCYRLQPVVAGL*TGHREGLDLVG
Trigger: CCCCACCAAATCAAGACCCTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp CAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTTGACAGGTCATCGGGAGTCCTGCTCCATCTTGTaGCACTTGTCCTGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: QCYRLQPVVAGLLTGHRESCSIL*HLSWES
Trigger: AGACTCCCAGGACAAGTGTCACAAGATGGAGCAGGA...CTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAATAGATGAGGACTTTTaGCCCCTCCAGAACAATGTA +
Preference number: 4 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVIDEDF*PLQNNV
Trigger: TACATTGTTCTGGAGGGGTCAAAAGTCCTCATCTAT...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp TACGATTATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGTAAGCGACTCCACTTaGGATCATCTGTGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: YDYFLLASRWSHRRVPHSVSDST*DHLCGY
Trigger: GTAGCCGCACAGATGATCTCAAGTGGAGTCGCTTAC...GGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAATAATCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAATGGATCTTCAGCTGCTaGTCAGCATTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAEWIFSC*SALIFS
Trigger: GGAGAAGATCAATGCTGAGCAGCAGCTGAAGATCCA...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGTGCTCCTTGATCTCCTaGAGCTTCCGGCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKCSLIS*SFRLCS
Trigger: AGAGCAGAGCCGGAAGCTCCAGGAGATCAAGGAGCA...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACCTTTCTGCGGCTGGATaGTGGGGCAAGCAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDLSAAG*WGKQAH
Trigger: ATGAGCCTGCTTGCCCCACCATCCAGCCGCAGAAAG...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAGCTTGTCGGGGAAGCTaGGTGCTAGCAAGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTACRGS*VLASRG
Trigger: CCCTCTACTTGCTAGCACCCAGCTTCCCCGACAAGC...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGCAGGTAGCGAGGGTTTaGAATTTCCAGATATGCTCG +
Preference number: 4 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPEQVARV*NFQICS
Trigger: CGAGCATATCTGGAAATTCCAAACCCTCGCTACCTG...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp TACGATTATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCCAGACCTTGTTAACCTaGGACAGTGGGGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: YDYFLLASRWSHRRVPHSQTLLT*DSGVLT
Trigger: AGTGAGGACCCCACTGTCCCAGGTTAACAAGGTCTG...GGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAATAATCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp TACGATTATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCACAAGTGGCAGCCTTTaGCGGCTTCGAATATGTTGG +
Preference number: 4 (lower is better)
Translates to: YDYFLLASRWSHRRVPHSTSGSL*RLRICW
Trigger: CCAACATATTCGAAGCCGTCAAAGGCTGCCACTTGT...GGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAATAATCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGGGCAGGGCTCCCCAGTaGGGATCTGGCCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLGRAPQ*GSGLDL
Trigger: GAGATCCAGGCCAGATCCTCACTGGGGAGCCCTGCC...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGTCCTGCAGGGACAGCTaGAGCTCCGTGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLSCRDS*SSVSCR
Trigger: GCGGCAGCTCACGGAGCTGCAGCTGTCCCTGCAGGA...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGCGGTCCAGCGCCTCCTaGAGCCCTTGCGTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLRSSAS*SPCVSL
Trigger: CAGACTGACGCAAGGGCTGCAGGAGGCGCTGGACCG...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACAATCCGGGGTCCCAATaGGGAGTTTGGCATCCACCT +
Preference number: 4 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDNPGSQ*GVWHPP
Trigger: AGGTGGATGCCAAACTCCCCATTGGGACCCCGGATT...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGTCCGTGGCTTTGCGGTaGGCAGCTTCCTCCCGCGCA +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLSVALR*AASSRA
Trigger: TGCGCGGGAGGAAGCTGCCCACCGCAAAGCCACGGA...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGTGTTCGCCTGCACAATaGAGACAGGGAAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKCSPAQ*RQGSCW
Trigger: CCAACAGCTTCCCTGTCTCCATTGTGCAGGCGAACA...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp ATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCCAGAGAGGTTATTTTTGTCCTaGAAGGCGTACTGTAACTGG +
Preference number: 4 (lower is better)
Translates to: MQLSAMQSSQSGLLLIPERLFLS*KAYCNW
Trigger: CCAGTTACAGTACGCCTTTCAGGACAAAAATAACCT...CTCTGGGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGCAGGCTGATATTCCATaGCCAGGTAAAGGTTATTTT +
Preference number: 4 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQQADIP*PGKGYF
Trigger: AAAATAACCTTTACCTGGTCATGGAATATCAGCCTG...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGAATTCATCTTAGCGGCTaGTCCAAAATCCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRIHLSG*SKIHQL
Trigger: AAGCTGGTGGATTTTGGATCAGCCGCTAAGATGAAT...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGCTGGCACACAGAGGATaGAACCCACGAATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVLAHRG*NPRILL
Trigger: GAGAAGAATTCGTGGGTTTCATCCTCTGTGTGCCAG...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAGGCAGAAGGCCTCAGTaGAGTGTGTGGCATATTCAG +
Preference number: 4 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTGRRPQ*SVWHIQ
Trigger: CTGAATATGCCACACACTTCACTGAGGCCTTCTGCC...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGGGATGCAGTACTTGCTaGGGTTGTCATTGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVGCSTC*GCHCSG
Trigger: TCCGCTACAATGACAACCTCAGCAAGTACTGCATCC...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAGGATGCTGTAGTTGGTaGAGTGGATACAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTGCCSW*SGYSCR
Trigger: CCTGCAGCTGTATCCACTTCACCAACTACAGCATCC...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACATCCTCCTCGTGTCTCTaGATCATGTTCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTSSSCL*IMFSRL
Trigger: GAGCCTGGAGAACATGATGCAGAGACACGAGGAGGA...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAAGGTCCATCTGCTGCTaGAATTTGGCTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTRSICC*NLACSS
Trigger: GGAGGAGCAAGCCAAATTGCAGCAGCAGATGGACCT...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAGGCGAACACAGCAGGTaGCAAGGAATGGTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTGEHSR*QGMVVL
Trigger: AAGAACGACCATTCCTTGGCACCTGCTGTGTTCGCC...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTTGACAGGTCATCGGGAGAATGAAACCTGTTCCTaGGCCAGCAAAGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QCYRLQPVVAGLLTGHRENETCS*ASKAFF
Trigger: GAAGAAGGCTTTGCTGGCCCAGGAACAGGTTTCATT...CTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGGCATCGAATTTGCGCTaGATCTCATCTCGATGTGCC +
Preference number: 4 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKASNLR*ISSRCA
Trigger: GGCACATCGAGATGAGATCCAGCGCAAATTCGATGC...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACATTCAAACAGTCTCCCTaGGGACCGCTCTCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTFKQSP*GPLSPS
Trigger: ACTAGGAGAGAGCGGTCCCCAGGGAGACTGTTTGAA...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAAAAATTTCTGCTGCCTaGGTTCTGAGATCATCTCTT +
Preference number: 4 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGKISAA*VLRSSL
Trigger: AAGAGATGATCTCAGAACTCAGGCAGCAGAAATTTT...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACCGACTCTTGTCACTGTaGTCTTGGTGGCTGATCTTC +
Preference number: 4 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDRLLSL*SWWLIF
Trigger: GAAGATCAGCCACCAAGATCACAGTGACAAGAGTCG...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAGGTATTTGCAAGTTCTaGAGCACCAACGGCACCATG +
Preference number: 4 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTGICKF*STNGTM
Trigger: CATGGTGCCGTTGGTGCTTCAGAACTTGCAAATACC...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGGGATCCAAGGACTCGTaGTCCGAGATAATATGTTCC +
Preference number: 4 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVGSKDS*SEIICS
Trigger: GGAACATATTATCTCGGAGCACGAGTCCTTGGATCC...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCATGTCGTGGAGAAGCTaGAGAGCTTTGTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: PKSRGESKAGEALWEIKGMSWRS*RALSSS
Trigger: GGAGGATGACAAAGCTCTGCAGCTTCTCCACGACAT...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGCTGGAGACTTGTCCCTaGGCAGCTCTGTCCGACCCT +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLLETCP*AALSDP
Trigger: AGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAG...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCATCTGGTGCACGCTGTaGACAGCCAAAATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PKSRGESKAGEALWEIKGIWCTL*TAKISS
Trigger: TGAGCTGATTTTGGCTGTCCACAGCGTGCACCAGAT...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGACTCCTTTCTGCGGCTaGATGGTGGGGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLTPFCG*MVGQAG
Trigger: GCCTGCTTGCCCCACCATCCAGCCGCAGAAAGGAGT...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGACATTCGAGGCATTTaGATGCCTGGCGTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDDIRGI*MPGVQS
Trigger: ACTTTGGACGCCAGGCATCCAAATGCCTCGAATGTC...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp CTTCCAGCCACGGTTCGAGTCCGGGTTGGTTTCCTTTaGATGAACGGGTTCAGGCTGGAGCTAAGTACAAAA +
Preference number: 4 (lower is better)
Translates to: LPATVRVRVGFL*MNGFRLELSTK
Trigger: TTTTGTACTTAGCTCCAGCCTGAACCCGTTCATCAAAAGGAAACCAACCCGGACTCGAACCGTGGCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp CCAAGGCCTATGAATGCTAGGCTTGGAGCAAGTCTATaGCACGCTTTCCTGGCCAAAGCTACGCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PRPMNARLGASL*HAFLAKATQKA
Trigger: AGCTTTCTGCGTAGCTTTGGCCAGGAAAGCGTGCAATAGACTTGCTCCAAGCCTAGCATTCATAGGCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp CAACAACAGAGCCATCCCTCTCAGGTGGATCTGGAATaGCCCATGTGTGCCCATGTGTTCTCCTCGTTCTTA +
Preference number: 4 (lower is better)
Translates to: QQQSHPSQVDLE*PMCAHVFSSFL
Trigger: TAAGAACGAGGAGAACACATGGGCACACATGGGCAATTCCAGATCCACCTGAGAGGGATGGCTCTGTTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAGATACCCCAGTGCCTTaGTGTACGAAAATCCCACAA +
Preference number: 4 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTDTPVP*CTKIPQ
Trigger: TTGTGGGATTTTCGTACAGCAAGGCACTGGGGTATC...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp AGCACATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCAACTTCAAAAACCGCTaGAAGTTCATGATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: STCSYLPCRAPSRVSSSSNFKNR*KFMMLL
Trigger: CAACAACATCATGAACTTCCAGCGGTTTTTGAAGTT...GGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCATGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTTGACAGGTCATCGGGAGCTGGTTCATCAAAATTaGAGGTGTCATCGTCAGACT +
Preference number: 4 (lower is better)
Translates to: QCYRLQPVVAGLLTGHRELVHQN*RCHRQT
Trigger: AGTCTGACGATGACACCTCCAATTTTGATGAACCAG...CTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGTTGTCCTGGGAGTCTTaGAGCTCTTTGCTTTTGATG +
Preference number: 4 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVLSWES*SSLLLM
Trigger: CATCAAAAGCAAAGAGCTCCAAGACTCCCAGGACAA...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGTTCTTTTTAGCAGGCTaGTCCATTTTGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVFFLAG*SILACR
Trigger: CCTGCAAGCCAAAATGGACCAGCCTGCTAAAAAGAA...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGCCCGTTTGTTATTTCTaGGCACTTTCATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVPVCYF*ALSSTL
Trigger: AAGGGTGGATGAAAGTGCCCAGAAATAACAAACGGG...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp AGGAAGCACTTCACAGATGAGACACGCAATATACACTaGTCAGGGCTCAAGGAACCCGTTTCTCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RKHFTDETRNIH*SGLKEPVSRGG
Trigger: ACCTCCACGAGAAACGGGTTCCTTGAGCCCTGACAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp CAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTTGACAGGTCATCGGGAGAGGTCCTTCTTTATCTaGTTGTCCAATACCTTGATC +
Preference number: 4 (lower is better)
Translates to: QCYRLQPVVAGLLTGHRERSFFI*LSNTLI
Trigger: GATCAAGGTATTGGACAATCAGATAAAGAAGGACCT...CTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGTCCTTGAGAGCCTGCTaGAGAGCAAGAATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLSLRAC*RARISA
Trigger: GGCCGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGA...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACTCTCTCTACGCTCCATaGTCTCTAGTCTCTTTACCT +
Preference number: 4 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDSLYAP*SLVSLP
Trigger: AGGTAAAGAGACTAGAGACCATGGAGCGTAGAGAGA...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACATTATCAGCCATCTGCTaGATCTGTTCGGACTTTGTC +
Preference number: 4 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTLSAIC*ICSDFV
Trigger: GACAAAGTCCGAACAGATCCAGCAGATGGCTGATAA...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGGCACAATCTCGTCATTaGCCCCGGAAGCCTCATCGA +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLAQSRH*PRKPHR
Trigger: TCGATGAGGCTTCCGGGGCCAATGACGAGATTGTGC...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACCCAATCCCTGGGATGTaGGTTAAGGAGTTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDPIPGM*VKEFFK
Trigger: CTTGAAAAACTCCTTAACCCACATCCCAGGGATTGG...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAAACACCCCAAATTCGTaGAAGCACAGCAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTNTPNS*KHSRYS
Trigger: AGAATACCTGCTGTGCTTCCACGAATTTGGGGTGTT...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACTCCAGGAGGGATCTCTaGGTCTCAGAGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VSCKYVQSVELALCSRKHSRRDL*VSEAFS
Trigger: GCTGAAGGCCTCTGAGACTCAGAGATCCCTCCTGGA...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGGAATTCCTCTGGAGTTaGCGACTCCTTTCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLEFLWS*RLLSAA
Trigger: AGCCGCAGAAAGGAGTCGTCAACTCCAGAGGAATTC...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGATTTTATCAGCCATCTaGTGGATCTGTTCGGACTTT +
Preference number: 4 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKILSAI*WICSDF
Trigger: AAAGTCCGAACAGATCCAGCAGATGGCTGATAAAAT...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGTGCTCCTTGAGAGCCTaGTGCAGAGCAAGAATCTCG +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLCSLRA*CRARIS
Trigger: CGAGATTCTTGCTCTGCAGCAGGCTCTCAAGGAGCA...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCTCCCAATGGGGAGTTTaGCATCCACCTTATTTGAAT +
Preference number: 4 (lower is better)
Translates to: PKSRGESKAGEALWEIKGSQWGV*HPPYLN
Trigger: ATTCAAATAAGGTGGATGCCAAACTCCCCATTGGGA...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCCCTCATCGAGTTGTTTaGACAGGTAGAAGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: PKSRGESKAGEALWEIKGPHRVV*TGRSFG
Trigger: ACCAAAACTTCTACCTGTCCAAACAACTCGATGAGG...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACTGTGGCATATTCAGCTaGCAGGCCACAGGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: VSCKYVQSVELALCSRKHCGIFS*QATGSG
Trigger: CCCGCTACCTGTGGCCTGCCAGCTGAATATGCCACA...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGGATGACGACTTTGCTTaGCATAGCGGCGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLDDDFA*HSGADA
Trigger: TGCATCTGCGCCGCTATGCCAAGCAAAGTCGTCATC...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACCTCTGCTCGCTCCTTTaGCTGGCGGATATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VSCKYVQSVELALCSRKHLCSLL*LADILQ
Trigger: CTGCAGAATATCCGCCAGGCAAAGGAGCGAGCAGAG...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGTCTGTCTCTAGTTTCTaGTGTAAGCTCCGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLSVSSF*CKLRAF
Trigger: GAACGCCCGGAGCTTACAGCAGAAACTAGAGACAGA...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACGTGCTCGTTGTATGTTaGTGGGCCTCGCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: VSCKYVQSVELALCSRKHVLVVC*WASLVG
Trigger: CCCAACAAGCGAGGCCCACCAACATACAACGAGCAC...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTaGTGGGAGATTAAAGGCAAAGATAAGGCCTATAGT +
Preference number: 4 (lower is better)
Translates to: PKSRGESKAGEA*WEIKGKDKAYS
Trigger: ACTATAGGCCTTATCTTTGCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACTGCAGGTCCATCTGCTaGTGCAATTTGGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VSCKYVQSVELALCSRKHCRSIC*CNLACS
Trigger: GGAGCAAGCCAAATTGCAGCAGCAGATGGACCTGCA...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACAAGATGTGGTTCTTCTaGAGGTCCATCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VSCKYVQSVELALCSRKHKMWFF*RSICCC
Trigger: GCAGCAGCAGATGGACCTGCAGAAGAACCACATCTT...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACTGTGATCTTGGTGGCTaGTCTTCTCCAGTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VSCKYVQSVELALCSRKHCDLGG*SSPVAL
Trigger: AAGAGCAACTGGAGAAGATCAGCCACCAAGATCACA...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACACCAAGATACCCCAGTaGCTTGCTGTACGAAAATCC +
Preference number: 4 (lower is better)
Translates to: VSCKYVQSVELALCSRKHTKIPQ*LAVRKS
Trigger: GGATTTTCGTACAGCAAGGCACTGGGGTATCTTGGT...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGCCACGAATTCTTCTCTaGTTCATCAAAATTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLPRILL*FIKIGG
Trigger: ACCTCCAATTTTGATGAACCAGAGAAGAATTCGTGG...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACTGTTCGGACTTTGTCTaGATGTCATCCTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: VSCKYVQSVELALCSRKHCSDFV*MSSFSL
Trigger: CAGACTGAAGGATGACATCCAGACAAAGTCCGAACA...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
3UTR CAA 72 bp GGGAGATTAAAGGCAAAGATAAGGCCTATAGTTAGCTaGCCAACTGTAAAGCCTCTAGTTGGTTGGTTCTAT +
Preference number: 4 (lower is better)
Translates to: GRLKAKIRPIVS*PTVKPLVGWFY
Trigger: ATAGAACCAACCAACTAGAGGCTTTACAGTTGGCAAGCTAACTATAGGCCTTATCTTTGCCTTTAATCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR TCA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACCTTGCAGGAAATCAATaGGTTTGGTTTGCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: VSCKYVQSVELALCSRKHLAGNQ*VWFAER
Trigger: TCTCTCAGCAAACCAAACTCATTGATTTCCTGCAAG...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR GCA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGTTCAGCTCATTGTACTaGAGAGGAACCTTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LALCSRKHFTDETRNIHLFSSLY*RGTFFF
Trigger: AAAGAAAAAGGTTCCTCTGCAGTACAATGAGCTGAA...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS GCA 90 bp GCTGCCCGGGCGGCCTGCAGGGCCGTCAGCTGGGACTCGCGCTCCTaGAGGGACAGCTGCAGCTCCGTGAGCTGCCGCTTCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AARAACRAVSWDSRS*RDSCSSVSCRFSSS
Trigger: GCTGGAGCTGAAGCGGCAGCTCACGGAGCTGCAGCTGTCCCTGCAGGAGCGCGAGTCCCAGCTGACGGCCCTGCAGGCCGCCCGGGCAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 90 bp CTCCTCCAGCTCTGTCTTCGCCTGGCGGAGCTGGCTCTCCAGCGCTaGCCGGGCGGCCTGCAGGGCCGTCAGCTGGGACTCGCGCTCCTG +
Preference number: 5 (lower is better)
Translates to: LLQLCLRLAELALQR*PGGLQGRQLGLALL
Trigger: CAGGAGCGCGAGTCCCAGCTGACGGCCCTGCAGGCCGCCCGGGCAGCGCTGGAGAGCCAGCTCCGCCAGGCGAAGACAGAGCTGGAGGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 90 bp GGGCCTTCCGGTGGCGCCGGGCTGGAGGCCACGCGTTTGGTGATGTaGTCGTTGTATGTTGGTGGGCCTCGCTTGTTGGGGCTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: GPSGGAGLEATRLVM*SLYVGGPRLLGLLR
Trigger: CCGCAGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCCTCCAGCCCGGCGCCACCGGAAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 90 bp GGGGCGGTTTCCCCTGGAAGAAGAGATTTAGCCTGGAGGCCCGACTaGCAATGGGCTCGGAGGCACTGGCCTCCGGCGGGTTCCGCACAC +
Preference number: 5 (lower is better)
Translates to: GAVSPGRRDLAWRPD*QWARRHWPPAGSAH
Trigger: GTGTGCGGAACCCGCCGGAGGCCAGTGCCTCCGAGCCCATTGCCAGTCGGGCCTCCAGGCTAAATCTCTTCTTCCAGGGGAAACCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS CCA 90 bp CGCCGGGCTGGAGGCCACGCGTTTGGTGATGTGCTCGTTGTATGTTaGTGGGCCTCGCTTGTTGGGGCTGCTGCGGGAGGTGGAGGGCAC +
Preference number: 5 (lower is better)
Translates to: RRAGGHAFGDVLVVC*WASLVGAAAGGGGH
Trigger: GTGCCCTCCACCTCCCGCAGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCCTCCAGCCCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp GGCTGGGCGGACGGGTGCTGGGGTCCCCTGTGGTGGAGACTCAGAGCGCGGTGTCCAAAATCCACCAGCTaGATGTGTCCCGTCCGGTCG +
Preference number: 5 (lower is better)
Translates to: GWADGCWGPLWWRLRARCPKSTS*MCPVRS
Trigger: CGACCGGACGGGACACATCAAGCTGGTGGATTTTGG...ACACCGCGCTCTGAGTCTCCACCACAGGGGACCCCAGCACCCGTCCGCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGCTGCTGCCAGGCTCCTaGCTCTGGAGCCCCGGGGAG +
Preference number: 5 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAELLPGS*LWSPGE
Trigger: CTCCCCGGGGCTCCAGAGCAAGGAGCCTGGCAGCAG...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GTCTGGACCCAGCTGTGCCGAATGCGGGCCGGGCCTGGCCAGGCCAAGCAGGGCCTGGAGGCCACGCGTTaGGTGATGTGCTCGTTGTAT +
Preference number: 5 (lower is better)
Translates to: VWTQLCRMRAGPGQAKQGLEATR*VMCSLY
Trigger: ATACAACGAGCACATCACCAAACGCGTGGCCTCCAG...GCCCTGCTTGGCCTGGCCAGGCCCGGCCCGCATTCGGCACAGCTGGGTCCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGCTGGGCGGACGGGTGCTGGGGTCCCCTGTGGTGGAGACTCAGAGCGCGGTGTCTTCATCAGGGCGGGTaGGCTGCACTCTTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: GWADGCWGPLWWRLRARCLHQGG*AALFKE
Trigger: CTCTTTGAAGAGTGCAGCCAACCCGCCCTGATGAAG...ACACCGCGCTCTGAGTCTCCACCACAGGGGACCCCAGCACCCGTCCGCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS CCA 90 bp TGGCTGGTGAGCTGCATCTCCCGCTCCGTGATCTCACGGCGGAGATaGTCCACCTCACTCCGCAGCTGCACAATCTCGTCATTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: WLVSCISRSVISRRR*STSLRSCTISSLAP
Trigger: CGGGGCCAATGACGAGATTGTGCAGCTGCGGAGTGAGGTGGACCATCTCCGCCGTGAGATCACGGAGCGGGAGATGCAGCTCACCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp GGCTGGGCGGACGGGTGCTGGGGTCCCCTGTGGTGGAGACTCAGAGCGCGGTGTAGCTCACTGCTAACTTaGGGGTCATCTGGGAACTTC +
Preference number: 5 (lower is better)
Translates to: GWADGCWGPLWWRLRARCSSLLT*GSSGNF
Trigger: GAAGTTCCCAGATGACCCCAAAGTTAGCAGTGAGCT...ACACCGCGCTCTGAGTCTCCACCACAGGGGACCCCAGCACCCGTCCGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGCTGGGCGGACGGGTGCTGGGGTCCCCTGTGGTGGAGACTCAGAGCGCGGTGTCTTGTCACTGTGATCTaGGTGGCTGATCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GWADGCWGPLWWRLRARCLVTVI*VADLLQ
Trigger: CTGGAGAAGATCAGCCACCAAGATCACAGTGACAAG...ACACCGCGCTCTGAGTCTCCACCACAGGGGACCCCAGCACCCGTCCGCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTACCTCCGCTTCCGCGGTaGTCTCCTCCAGCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVPPLPR*SPPALS
Trigger: AGACAGAGCTGGAGGAGACAACCGCGGAAGCGGAGG...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGTGACCCAGCGCTGCTaGTCGGGGAAGCTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQVTQRC*SGKLGA
Trigger: AGCACCCAGCTTCCCCGACAAGCAGCGCTGGGTCAC...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS CCA 90 bp GTTTCCCCTGGAAGAAGAGATTTAGCCTGGAGGCCCGACTGGCAATaGGCTCGGAGGCACTGGCCTCCGGCGGGTTCCGCACACCATACT +
Preference number: 5 (lower is better)
Translates to: VSPGRRDLAWRPDWQ*ARRHWPPAGSAHHT
Trigger: AGTATGGTGTGCGGAACCCGCCGGAGGCCAGTGCCTCCGAGCCCATTGCCAGTCGGGCCTCCAGGCTAAATCTCTTCTTCCAGGGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS-3UTR CAA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGCCCGGGGAGTTCATTTaGTCCCGGCAGAAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAEPGEFI*SRQKAS
Trigger: TGAGGCCTTCTGCCGGGACAAAATGAACTCCCCGGG...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS CCA 90 bp GCTCGTCGTTCAGGGCCTCCAGGTCCAGGACCTGCTCCTCCAGCATaGTGCATGTCGTCTTCAGAGCCTCCATCGTTTGCTTCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: ARRSGPPGPGPAPPA*CMSSSEPPSFASGW
Trigger: CCAGCCAGAAGCAAACGATGGAGGCTCTGAAGACGACATGCACCATGCTGGAGGAGCAGGTCCTGGACCTGGAGGCCCTGAACGACGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGTCCATGGAGCTAACCTaGGCAGGGGAGTCCAGACTC +
Preference number: 5 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAESMELT*AGESRL
Trigger: GAGTCTGGACTCCCCTGCCAAGGTTAGCTCCATGGA...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGAGCGGTGCGGTGTGCTaGGCTCTCGGGGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKSGAVC*ALGGGW
Trigger: CCAGCCACCCCCGAGAGCCAAGCACACCGCACCGCT...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS GCA 90 bp ATCTCCTGGAGCTTCCGGCTCTGCTCTCGGATGTCGTGGAGAAGCTaGAGAGCTTTGTCATCCTCCTGGGACACCTCCATCCGCGCTTGC +
Preference number: 5 (lower is better)
Translates to: ISWSFRLCSRMSWRS*RALSSSWDTSIRAC
Trigger: GCAAGCGCGGATGGAGGTGTCCCAGGAGGATGACAAAGCTCTGCAGCTTCTCCACGACATCCGAGAGCAGAGCCGGAAGCTCCAGGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 90 bp CGGCGGCAAGCCGAGACTCCCTCAGCTCAGACTCGTAGAGATCGCTaGGTCTGCGGGCTGACACCAGGTCTTCTTCCAGCTGATTCATCA +
Preference number: 5 (lower is better)
Translates to: RRQAETPSAQTRRDR*VCGLTPGLLPADSS
Trigger: TGATGAATCAGCTGGAAGAAGACCTGGTGTCAGCCCGCAGACGCAGCGATCTCTACGAGTCTGAGCTGAGGGAGTCTCGGCTTGCCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 90 bp CGCTCCGTGATCTCACGGCGGAGATGGTCCACCTCACTCCGCAGCTaGACAATCTCGTCATTGGCCCCGGAAGCCTCATCGAGTTGTTTG +
Preference number: 5 (lower is better)
Translates to: RSVISRRRWSTSLRS*TISSLAPEASSSCL
Trigger: CAAACAACTCGATGAGGCTTCCGGGGCCAATGACGAGATTGTGCAGCTGCGGAGTGAGGTGGACCATCTCCGCCGTGAGATCACGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTACTGCTGCAATTTGGCTaGCTCCTCCAGAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVLLQFG*LLQKPL
Trigger: CAGAGGCTTCTGGAGGAGCAAGCCAAATTGCAGCAG...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGCTGGGCGGACGGGTGCTGGGGTCCCCTGTGGTGGAGACTCAGAGCGCGGTGTCTGGTCCATTTTGGCTaGCAGGAAATCAATGAGTTT +
Preference number: 5 (lower is better)
Translates to: GWADGCWGPLWWRLRARCLVHFG*QEINEF
Trigger: AAACTCATTGATTTCCTGCAAGCCAAAATGGACCAG...ACACCGCGCTCTGAGTCTCCACCACAGGGGACCCCAGCACCCGTCCGCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGGTGGGCCTCGCTTGTaGGGGCTGCTGCGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDGGPRL*GLLREV
Trigger: CACCTCCCGCAGCAGCCCCAACAAGCGAGGCCCACC...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTATTGGTGATGTGCTCGTaGTATGTTGGTGGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVLVMCS*YVGGPR
Trigger: GCGAGGCCCACCAACATACAACGAGCACATCACCAA...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS TCA 90 bp ACGTCCCCGGTCGCCTTCTCTCTAACCACCTGCACTTCAGCGAAGTaGCCACAGCCCACAAGGCTTCGAACTTCGAAGTCTCTCGCCGAC +
Preference number: 5 (lower is better)
Translates to: TSPVAFSLTTCTSAK*PQPTRLRTSKSLAD
Trigger: GTCGGCGAGAGACTTCGAAGTTCGAAGCCTTGTGGGCTGTGGTCACTTCGCTGAAGTGCAGGTGGTTAGAGAGAAGGCGACCGGGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS GCA 90 bp CCACAGCCCACAAGGCTTCGAACTTCGAAGTCTCTCGCCGACGGCTaGAGCTCCCGCAACTCGGCTATGGTGTCGGAATACTTCTGGACA +
Preference number: 5 (lower is better)
Translates to: PQPTRLRTSKSLADG*SSRNSAMVSEYFWT
Trigger: TGTCCAGAAGTATTCCGACACCATAGCCGAGTTGCGGGAGCTGCAGCCGTCGGCGAGAGACTTCGAAGTTCGAAGCCTTGTGGGCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS GCA 90 bp TTCTCTAGCTCCCGCTCTGCTCGCTCCTTTGCCTGGCGGATATTCTaGAGGAGCTCGGTGGCCTCTGTGCTGGCTTTTACAGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FSSSRSARSFAWRIF*RSSVASVLAFTAFS
Trigger: GGAGAAGGCTGTAAAAGCCAGCACAGAGGCCACCGAGCTCCTGCAGAATATCCGCCAGGCAAAGGAGCGAGCAGAGCGGGAGCTAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 90 bp GCTCTGCTCGCTCCTTTGCCTGGCGGATATTCTGCAGGAGCTCGGTaGCCTCTGTGCTGGCTTTTACAGCCTTCTCCAGCTTCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: ALLAPLPGGYSAGAR*PLCWLLQPSPASPG
Trigger: TCCAGGAGAAGCTGGAGAAGGCTGTAAAAGCCAGCACAGAGGCCACCGAGCTCCTGCAGAATATCCGCCAGGCAAAGGAGCGAGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 90 bp CGGTTGTGTAGCTTCTCTAGCTCCCGCTCTGCTCGCTCCTTTGCCTaGCGGATATTCTGCAGGAGCTCGGTGGCCTCTGTGCTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: RLCSFSSSRSARSFA*RIFCRSSVASVLAF
Trigger: AAAAGCCAGCACAGAGGCCACCGAGCTCCTGCAGAATATCCGCCAGGCAAAGGAGCGAGCAGAGCGGGAGCTAGAGAAGCTACACAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 90 bp GCGTTGATCATCGCCTTCTGCTCGCTGAGGATCTTGCCCTTCTCGTaGGCCTCCTCCTCGTGTCTCTGCATCATGTTCTCCAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: ALIIAFCSLRILPFS*ASSSCLCIMFSRLS
Trigger: GGAGAGCCTGGAGAACATGATGCAGAGACACGAGGAGGAGGCCCACGAGAAGGGCAAGATCCTCAGCGAGCAGAAGGCGATGATCAACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp ATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGGCGGAGAGCAGACATCTGCTGTaGAGTCATGAGGGGCGGTTT +
Preference number: 5 (lower is better)
Translates to: ISCWRPGGHTEEFPTPAESRHLL*SHEGRF
Trigger: AAACCGCCCCTCATGACTCAACAGCAGATGTCTGCT...CTCCGCCGGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGAGAAGCTGCAGAGCTTaGTCATCCTCCTGGGACACC +
Preference number: 5 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQRSCRA*SSSWDT
Trigger: GGTGTCCCAGGAGGATGACAAAGCTCTGCAGCTTCT...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAATTTGCCGCAAGCTTGTaGGCTTCCGACAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAEFAASL*ASDSST
Trigger: CGTGGAGCTGTCGGAAGCCAACAAGCTTGCGGCAAA...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGACAGGCTCTCGGCTTaGAGCTTCTGCTCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQDRLSA*SFCSLR
Trigger: TCTCAAGGAGCAGAAGCTCAAAGCCGAGAGCCTGTC...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGTCCAGAAGCCTCTGTTaGAGCTCCCGCTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQSRSLC*SSRSVS
Trigger: AGAGACAGAGCGGGAGCTCAAACAGAGGCTTCTGGA...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAGGGTGGTCCGTGGCTTaGCGGTGGGCAGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTGWSVA*RWAASS
Trigger: GGAGGAAGCTGCCCACCGCAAAGCCACGGACCACCC...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAGAGACAGGGAAGCTGTaGGACGAGGAGGCGAACACA +
Preference number: 5 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAEETGKL*DEEANT
Trigger: TGTGTTCGCCTCCTCGTCCAACAGCTTCCCTGTCTC...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp TGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGGCAGGTCGGGGTAGGTAAGCGACTCCACTaGAGATCATCTGTGCGGCTA +
Preference number: 5 (lower is better)
Translates to: WQQYIGRATQGGVRQVGVGKRLH*RSSVRL
Trigger: TAGCCGCACAGATGATCTCAAGTGGAGTCGCTTACC...TACCCCGACCTGCCTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAGGGCGGCCTGGAGACTaGTCCCTGCGCAGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTGRPGD*SLRSSV
Trigger: GACAGAGCTGCGCAGGGACAAGTCTCCAGGCCGCCC...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS TCA 90 bp TCTCCAGGGAGTGGCGGCGTTCCTCGGCTTCCACCAGCTTCTTTTTaGTGCCCTCGGAGGAGTCTTCCCGGTTGTGTAGCTTCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: SPGSGGVPRLPPASF*CPRRSLPGCVASLA
Trigger: AGCTAGAGAAGCTACACAACCGGGAAGACTCCTCCGAGGGCATCAAAAAGAAGCTGGTGGAAGCCGAGGAACGCCGCCACTCCCTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
CDS GCA 90 bp CAAGCCGAGACTCCCTCAGCTCAGACTCGTAGAGATCGCTGCGTCTaGGGGCTGACACCAGGTCTTCTTCCAGCTGATTCATCATCAGCC +
Preference number: 5 (lower is better)
Translates to: QAETPSAQTRRDRCV*GLTPGLLPADSSSA
Trigger: GGCTGATGATGAATCAGCTGGAAGAAGACCTGGTGTCAGCCCGCAGACGCAGCGATCTCTACGAGTCTGAGCTGAGGGAGTCTCGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 90 bp TCGCTGAGGATCTTGCCCTTCTCGTGGGCCTCCTCCTCGTGTCTCTaGATCATGTTCTCCAGGCTCTCCTTGTCGGCCAGGTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: SLRILPFSWASSSCL*IMFSRLSLSARSFF
Trigger: AAAGAAGGACCTGGCCGACAAGGAGAGCCTGGAGAACATGATGCAGAGACACGAGGAGGAGGCCCACGAGAAGGGCAAGATCCTCAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAATGTGCTCGTTGTATGTaGGTGGGCCTCGCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAECARCM*VGLACW
Trigger: CCAACAAGCGAGGCCCACCAACATACAACGAGCACA...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS GCA 90 bp GGACAAAGCTGCTCACGTGCTTCATCTTCATCAGGGCGGGTTGGCTaGACTCTTCAAAGAGAGCGAAGAGGGCGTCTAGCATCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: GQSCSRASSSSGRVG*TLQRERRGRLASLP
Trigger: GGGAAGGGATGCTAGACGCCCTCTTCGCTCTCTTTGAAGAGTGCAGCCAACCCGCCCTGATGAAGATGAAGCACGTGAGCAGCTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS GCA 90 bp AAGCAACAACTCCGACAGACCACCAGTCACAGTCCAAGCCGTATGTaGCCCTTCGGTCCTCGTTCATCACGGTCAACACTTCCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: KQQLRQTTSHSPSRM*PFGPRSSRSTLPEP
Trigger: TGGCTCCGGAAGTGTTGACCGTGATGAACGAGGACCGAAGGGGCACATACGGCTTGGACTGTGACTGGTGGTCTGTCGGAGTTGTTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 90 bp CTCTTCCTGGGCCTTCATGTTCCTCTGGGTGAAGAGACTGCTGTTTaGCGCAAGCTTGTTGGCTTCCGACAGCTCCACGATCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: LFLGLHVPLGEETAV*RKLVGFRQLHDPLL
Trigger: GAGCAGAGGATCGTGGAGCTGTCGGAAGCCAACAAGCTTGCGGCAAACAGCAGTCTCTTCACCCAGAGGAACATGAAGGCCCAGGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 90 bp CTTCGAAGTCTCTCGCCGACGGCTGCAGCTCCCGCAACTCGGCTATaGTGTCGGAATACTTCTGGACAAAGCTGCTCACGTGCTTCATCT +
Preference number: 5 (lower is better)
Translates to: LRSLSPTAAAPATRL*CRNTSGQSCSRASS
Trigger: AGATGAAGCACGTGAGCAGCTTTGTCCAGAAGTATTCCGACACCATAGCCGAGTTGCGGGAGCTGCAGCCGTCGGCGAGAGACTTCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS CCA 90 bp CCCACAAACGGCAGCTCTTCGCCTGAGAAGCCCGAGGGGCTCAGCTaGCACACAGAGGATGAAACCCACGAATTCTTCTCTGGTTCATCA +
Preference number: 5 (lower is better)
Translates to: PTNGSSSPEKPEGLS*HTEDETHEFFSGSS
Trigger: TGATGAACCAGAGAAGAATTCGTGGGTTTCATCCTCTGTGTGCCAGCTGAGCCCCTCGGGCTTCTCAGGCGAAGAGCTGCCGTTTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp AGCACATGCAGCTATCTGCCATGCAGAGCTCCCAGTCGGGTCTCCTCCTCATCCTGGAAGTTCATGATGTaGTTGAAGGTCCGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: STCSYLPCRAPSRVSSSSWKFMM*LKVRAE
Trigger: CTCCGCCCGGACCTTCAACAACATCATGAACTTCCA...GGATGAGGAGGAGACCCGACTGGGAGCTCTGCATGGCAGATAGCTGCATGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp TACGATTATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGCTCTGCTCGCTCCTTaGCCTGGCGGATATTCTGCA +
Preference number: 5 (lower is better)
Translates to: YDYFLLASRWSHRRVPHSALLAP*PGGYSA
Trigger: TGCAGAATATCCGCCAGGCAAAGGAGCGAGCAGAGC...GGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAATAATCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACTGCTCGCTGAGGATCTaGCCCTTCTCGTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDCSLRI*PFSWAS
Trigger: GGAGGCCCACGAGAAGGGCAAGATCCTCAGCGAGCA...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGGAACTGGAAGGCAGGAGGGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCTGCTGCTGCAATTaGGCTTGCTCCTCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: GNWKAGGKRRDGGVWFAEICCCN*ACSSRS
Trigger: GCTTCTGGAGGAGCAAGCCAAATTGCAGCAGCAGAT...TTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCCCTCCTGCCTTCCAGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS TCA 90 bp AGACTCCCTCAGCTCAGACTCGTAGAGATCGCTGCGTCTGCGGGCTaGCACCAGGTCTTCTTCCAGCTGATTCATCATCAGCCTCATCTC +
Preference number: 5 (lower is better)
Translates to: RLPQLRLVEIAASAG*HQVFFQLIHHQPHL
Trigger: GAGATGAGGCTGATGATGAATCAGCTGGAAGAAGACCTGGTGTCAGCCCGCAGACGCAGCGATCTCTACGAGTCTGAGCTGAGGGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 90 bp CCCGATGTTTCTCCTCCAGCTCCTCGGCTTCCACCAGCTTCTTTTTaGTGCCCTCGGAGGAGTCTTCCCGGTTGTGTAGCTTCTCTAGCT +
Preference number: 5 (lower is better)
Translates to: PDVSPPAPRLPPASF*CPRRSLPGCVASLA
Trigger: AGCTAGAGAAGCTACACAACCGGGAAGACTCCTCCGAGGGCATCAAAAAGAAGCTGGTGGAAGCCGAGGAGCTGGAGGAGAAACATCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 90 bp GGCGGAGATGGTCCACCTCACTCCGCAGCTGCACAATCTCGTCATTaGCCCCGGAAGCCTCATCGAGTTGTTTGGACAGGTAGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: GGDGPPHSAAAQSRH*PRKPHRVVWTGRSF
Trigger: AAAACTTCTACCTGTCCAAACAACTCGATGAGGCTTCCGGGGCCAATGACGAGATTGTGCAGCTGCGGAGTGAGGTGGACCATCTCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAGTGTCATCGTCAGACTaGAGGGTGGGGACGAAGGGG +
Preference number: 5 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTVSSSD*RVGTKG
Trigger: CCCCTTCGTCCCCACCCTCAAGTCTGACGATGACAC...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGTGCACAATCTCGTCATaGGCCCCGGAAGCCTCATCG +
Preference number: 5 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVCTISS*APEASS
Trigger: CGATGAGGCTTCCGGGGCCAATGACGAGATTGTGCA...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp TACGATTATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCTTGAGCTTCTGCTCCTaGAGAGCCTGCTGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: YDYFLLASRWSHRRVPHSLSFCS*RACCRA
Trigger: TGCTCTGCAGCAGGCTCTCAAGGAGCAGAAGCTCAA...GGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAATAATCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp TGGGGCTATGGGATGGCAGCAGTACATCGGCAGAGCAACCCAGGGAGGAGTCAGAACAAGTGGCAGCCTTaGACGGCTTCGAATATGTTG +
Preference number: 5 (lower is better)
Translates to: WGYGMAAVHRQSNPGRSQNKWQP*TASNML
Trigger: CAACATATTCGAAGCCGTCAAAGGCTGCCACTTGTT...CTGACTCCTCCCTGGGTTGCTCTGCCGATGTACTGCTGCCATCCCATAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS TCA 90 bp CCTCCAGCTTTCCGGCCTGCGTCTCCAGGTAAAATTTCTGCTGCCTaGGTTCTGAGATCATCTCTTCCTGGGCCTTCATGTTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: PPAFRPASPGKISAA*VLRSSLPGPSCSSG
Trigger: CCCAGAGGAACATGAAGGCCCAGGAAGAGATGATCTCAGAACTCAGGCAGCAGAAATTTTACCTGGAGACGCAGGCCGGAAAGCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 90 bp TTTCCAGCTCCAGCAGCCGACTCTTGTCACTGTGATCTTGGTGGCTaGTCTTCTCCAGTTGCTCTTCCAGCTTTCGGTTCTGGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: FPAPAADSCHCDLGG*SSPVALPAFGSGPP
Trigger: TGGAGGCCCAGAACCGAAAGCTGGAAGAGCAACTGGAGAAGATCAGCCACCAAGATCACAGTGACAAGAGTCGGCTGCTGGAGCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 90 bp TCCCTCAGCCTTGTTTCCAGCTCCAGCAGCCGACTCTTGTCACTGTaGTCTTGGTGGCTGATCTTCTCCAGTTGCTCTTCCAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: SLSLVSSSSSRLLSL*SWWLIFSSCSSSFR
Trigger: CCGAAAGCTGGAAGAGCAACTGGAGAAGATCAGCCACCAAGATCACAGTGACAAGAGTCGGCTGCTGGAGCTGGAAACAAGGCTGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 90 bp TTCTGGACAAAGCTGCTCACGTGCTTCATCTTCATCAGGGCGGGTTaGCTGCACTCTTCAAAGAGAGCGAAGAGGGCGTCTAGCATCCCT +
Preference number: 5 (lower is better)
Translates to: FWTKLLTCFIFIRAG*LHSSKRAKRASSIP
Trigger: AGGGATGCTAGACGCCCTCTTCGCTCTCTTTGAAGAGTGCAGCCAACCCGCCCTGATGAAGATGAAGCACGTGAGCAGCTTTGTCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS CCA 90 bp TGCTCTCGGATGTCGTGGAGAAGCTGCAGAGCTTTGTCATCCTCCTaGGACACCTCCATCCGCGCTTGCTCCAAACTTCGCTTTAAGCTA +
Preference number: 5 (lower is better)
Translates to: CSRMSWRSCRALSSS*DTSIRACSKLRFKL
Trigger: TAGCTTAAAGCGAAGTTTGGAGCAAGCGCGGATGGAGGTGTCCCAGGAGGATGACAAAGCTCTGCAGCTTCTCCACGACATCCGAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGTTCTCCAGGCTCTCCTaGTCGGCCAGGTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKFSRLS*SARSFF
Trigger: AAAGAAGGACCTGGCCGACAAGGAGAGCCTGGAGAA...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGAGGACAGGTAGAAGTTTaGGTTGTTGAGCTCGGCGTT +
Preference number: 5 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRGQVEV*VVELGV
Trigger: AACGCCGAGCTCAACAACCAAAACTTCTACCTGTCC...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGACTGGTCCCAGACCTaGTTAACCTGGGACAGTGGG +
Preference number: 5 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDDWSQT*LTWDSG
Trigger: CCCACTGTCCCAGGTTAACAAGGTCTGGGACCAGTC...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS GCA 90 bp GACTCGACACGACAGACTCAGATCTACCAAGATACCCCAGTGCCTTaGTGTACGAAAATCCCACAAACGGCAGCTCTTCGCCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: DSTRQTQIYQDTPVP*CTKIPQTAALRLRS
Trigger: GCTTCTCAGGCGAAGAGCTGCCGTTTGTGGGATTTTCGTACAGCAAGGCACTGGGGTATCTTGGTAGATCTGAGTCTGTCGTGTCGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 90 bp TGCCTGAGTTCTGAGATCATCTCTTCCTGGGCCTTCATGTTCCTCTaGGTGAAGAGACTGCTGTTTGCCGCAAGCTTGTTGGCTTCCGAC +
Preference number: 5 (lower is better)
Translates to: CLSSEIISSWAFMFL*VKRLLFAASLLASD
Trigger: GTCGGAAGCCAACAAGCTTGCGGCAAACAGCAGTCTCTTCACCCAGAGGAACATGAAGGCCCAGGAAGAGATGATCTCAGAACTCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp GTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGAGGCACGCCTAAGAAGGATGTTCTCGGGCTaGATGTCTCGATGCACATAT +
Preference number: 5 (lower is better)
Translates to: VYLSAYLGCAFVVEARLRRMFSG*MSRCTY
Trigger: ATATGTGCATCGAGACATCAAGCCCGAGAACATCCT...TCTTAGGCGTGCCTCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS TCA 90 bp CTTTCCGGCCTGCGTCTCCAGGTAAAATTTCTGCTGCCTGAGTTCTaGGATCATCTCTTCCTGGGCCTTCATGTTCCTCTGGGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: LSGLRLQVKFLLPEF*DHLFLGLHVPLGEE
Trigger: CTCTTCACCCAGAGGAACATGAAGGCCCAGGAAGAGATGATCTCAGAACTCAGGCAGCAGAAATTTTACCTGGAGACGCAGGCCGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 90 bp GGAGAGTTACGGATGTTGTTCCAGTCCGTTCTGGCAAAGAAAGGGTaGCAGCAGAGACCCTCGAACTTCAGTCTCTCTTTCTGGACACAC +
Preference number: 5 (lower is better)
Translates to: GELRMLFQSVLAKKG*QQRPSNFSLSFWTH
Trigger: GTGTGTCCAGAAAGAGAGACTGAAGTTCGAGGGTCTCTGCTGCCACCCTTTCTTTGCCAGAACGGACTGGAACAACATCCGTAACTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGAGATACCCCAGTGCCTaGCTGTACGAAAATCCCACA +
Preference number: 5 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVRYPSA*LYENPT
Trigger: TGTGGGATTTTCGTACAGCAAGGCACTGGGGTATCT...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACTCTAGTCTCTTTACCTaGTTCTCCAGGGAGTGGCGG +
Preference number: 5 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDSSLFT*FSREWR
Trigger: CCGCCACTCCCTGGAGAACAAGGTAAAGAGACTAGA...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GTGGTGGGGACAGGTCTACCTTTCAGCCTACCTAGGGTGTGCCTTCGTGGTGGATGGTTTGCTGAGAGATaGTGCCTTCCATTTTCACTT +
Preference number: 5 (lower is better)
Translates to: VVGTGLPFSLPRVCLRGGWFAER*CLPFSL
Trigger: AAGTGAAAATGGAAGGCACAATCTCTCAGCAAACCA...TCCACCACGAAGGCACACCCTAGGTAGGCTGAAAGGTAGACCTGTCCCCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp TACGATTATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCGCTAGCTTCAGCTCATaGTACTGCAGAGGAACCTTT +
Preference number: 5 (lower is better)
Translates to: YDYFLLASRWSHRRVPHSASFSS*YCRGTF
Trigger: AAAGGTTCCTCTGCAGTACAATGAGCTGAAGCTAGC...GGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAATAATCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGAAACGGAGGGACGGAGGAGTGTGGTTTGCTGAAATCCTTCTCTGGTCGTAAGAAGGAATGGTCGTTCTaGTCCAGGAACTCGTCAAGC +
Preference number: 5 (lower is better)
Translates to: GNGGTEECGLLKSFSGRKKEWSF*SRNSSS
Trigger: GCTTGACGAGTTCCTGGACAAGAACGACCATTCCTT...CTTACGACCAGAGAAGGATTTCAGCAAACCACACTCCTCCGTCCCTCCGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS TCA 90 bp AGACCCTCGAACTTCAGTCTCTCTTTCTGGACACACAGCAGACTCTaGAGCAGATCAAGGAGCTCACTGCTAACTTTGGGGTCATCTGGG +
Preference number: 5 (lower is better)
Translates to: RPSNFSLSFWTHSRL*SRSRSSLLTLGSSG
Trigger: CCCAGATGACCCCAAAGTTAGCAGTGAGCTCCTTGATCTGCTTCAGAGTCTGCTGTGTGTCCAGAAAGAGAGACTGAAGTTCGAGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 90 bp AACTCGGCTATGGTGTCGGAATACTTCTGGACAAAGCTGCTCACGTaGTTCATCTTCATCAGGGCGGGTTGGCTGCACTCTTCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: NSAMVSEYFWTKLLT*FIFIRAGWLHSSKR
Trigger: TCTCTTTGAAGAGTGCAGCCAACCCGCCCTGATGAAGATGAAGCACGTGAGCAGCTTTGTCCAGAAGTATTCCGACACCATAGCCGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS-3UTR CAA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGCTTGTCCTGGGAGTCTaGGAGCTCTTTGCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVLVLGV*ELFAFD
Trigger: ATCAAAAGCAAAGAGCTCCAAGACTCCCAGGACAAG...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACAGCTGATCTTCTCCAGTaGCTCTTCCAGCTTTCGGTT +
Preference number: 5 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTADLLQ*LFQLSV
Trigger: AACCGAAAGCTGGAAGAGCAACTGGAGAAGATCAGC...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACGTGGACTGTGGGAAGCCTCATCGAGTaGTTTGGACAGGTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: GRSLHLGQVVIWEATWTVGSLIE*FGQVEV
Trigger: AACTTCTACCTGTCCAAACAACTCGATGAGGCTTCC...CACAGTCCACGTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCGGGGTGACACATCACTaGACATTCGAGGCATTTGGA +
Preference number: 5 (lower is better)
Translates to: PKSRGESKAGEALWEIKGGVTHH*TFEAFG
Trigger: TCCAAATGCCTCGAATGTCAAGTGATGTGTCACCCC...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp AGACAGAGCAGGAAGGAGTCTGCATTTAGGCCAGGTTGTAATCTGGGAAGCGACCATATGACCCTTAACTaGTCCTGGTATGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: RQSRKESAFRPGCNLGSDHMTLN*SWYEEA
Trigger: GGCCTCCTCATACCAGGACAAGTTAAGGGTCATATG...GTCGCTTCCCAGATTACAACCTGGCCTAAATGCAGACTCCTTCCTGCTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp TACGATTATTTCCTGCTGGCGTCCCGGTGGTCACACAGAAGAGTTCCCCACTCCTTCACGAGGTTTCCTTaGCAGCATATGACCCTTAAC +
Preference number: 5 (lower is better)
Translates to: YDYFLLASRWSHRRVPHSFTRFP*QHMTLN
Trigger: GTTAAGGGTCATATGCTGCAAAGGAAACCTCGTGAA...GGAGTGGGGAACTCTTCTGTGTGACCACCGGGACGCCAGCAGGAAATAATCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS CCA 90 bp GTTCATGATGTTGTTGAAGGTCCGGGCGGAGGTTCCCTCTGTGAATaGGGTCTTCCCATAAACCATCTCATAAGCAACAACTCCGACAGA +
Preference number: 5 (lower is better)
Translates to: VHDVVEGPGGGSLCE*GLPINHLISNNSDR
Trigger: TCTGTCGGAGTTGTTGCTTATGAGATGGTTTATGGGAAGACCCCATTCACAGAGGGAACCTCCGCCCGGACCTTCAACAACATCATGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 90 bp ACTTTGTCTGGATGTCATCCTTCAGTCTGTTCTCTCTACGCTCCATaGTCTCTAGTCTCTTTACCTTGTTCTCCAGGGAGTGGCGGCGTT +
Preference number: 5 (lower is better)
Translates to: TLSGCHPSVCSLYAP*SLVSLPCSPGSGGV
Trigger: AACGCCGCCACTCCCTGGAGAACAAGGTAAAGAGACTAGAGACCATGGAGCGTAGAGAGAACAGACTGAAGGATGACATCCAGACAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
CDS-3UTR CAA 90 bp CCTAAGAGTCGAGGAGAATCCAAAGCAGGAGAGGCCTTGTGGGAGATTAAAGGCAGCTGCTGCTCAGCATaGATCTTCTCCAGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: PKSRGESKAGEALWEIKGSCCSA*IFSSLE
Trigger: TTCCAAACTGGAGAAGATCAATGCTGAGCAGCAGCT...GCCTTTAATCTCCCACAAGGCCTCTCCTGCTTTGGATTCTCCTCGACTCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp CAGTGCTACAGATTGCAGCCTGTTGTGGCCGGTTTGTTGACAGGTCATCGGGAGATCAATGAGTTTGGTTaGCTGAGAGATTGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: QCYRLQPVVAGLLTGHREINEFG*LRDCAF
Trigger: GAAGGCACAATCTCTCAGCAAACCAAACTCATTGAT...CTCCCGATGACCTGTCAACAAACCGGCCACAACAGGCTGCAATCTGTAGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGAGACACACGGCGCACTaGGTGGCTCTCATGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LALCSRKHFTDETRNIHLRHTAH*VALMFR
Trigger: CCTGAACATGAGAGCCACCAAGTGCGCCGTGTGTCT...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GGAAGTCACAGTTTCAGTGGGGTAGAACCGTGCTGGGTTTTGTGTGAGCACACATCTGGTTCATCAAAATaGGAGGTGTCATCGTCAGAC +
Preference number: 5 (lower is better)
Translates to: GSHSFSGVEPCWVLCEHTSGSSK*EVSSSD
Trigger: GTCTGACGATGACACCTCCAATTTTGATGAACCAGA...TGTGTGCTCACACAAAACCCAGCACGGTTCTACCCCACTGAAACTGTGACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS GCA 90 bp CGCTGTGGACAGCCAAAATCAGCTCAGCAAGGTAAAACTGGATCATaGTCTCATCTAATTGGTCCTCGTATCTGTTCAGAAGCGACAGCA +
Preference number: 5 (lower is better)
Translates to: RCGQPKSAQQGKTGS*SHLIGPRICSEATA
Trigger: TGCTGTCGCTTCTGAACAGATACGAGGACCAATTAGATGAGAGCATGATCCAGTTTTACCTTGCTGAGCTGATTTTGGCTGTCCACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGTCCACCAGCTTCTTTTaGATGCCCTCGGAGGAGTCT +
Preference number: 5 (lower is better)
Translates to: LALCSRKHFTDETRNIHLSTSFF*MPSEES
Trigger: AGACTCCTCCGAGGGCATCAAAAAGAAGCTGGTGGA...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS CCA 90 bp ACTCTGAAGCAGATCAAGGAGCTCACTGCTAACTTTGGGGTCATCTaGGAACTTCAAAAACCGCTGGAAGTTCATGATGTTGTTGAAGGT +
Preference number: 5 (lower is better)
Translates to: TLKQIKELTANFGVI*ELQKPLEVHDVVEG
Trigger: ACCTTCAACAACATCATGAACTTCCAGCGGTTTTTGAAGTTCCCAGATGACCCCAAAGTTAGCAGTGAGCTCCTTGATCTGCTTCAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS-3UTR CAA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGGGATCTGTTCGGACTTaGTCTGGATGTCATCCTTCA +
Preference number: 5 (lower is better)
Translates to: LALCSRKHFTDETRNIHLGSVRT*SGCHPS
Trigger: TGAAGGATGACATCCAGACAAAGTCCGAACAGATCC...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp GTTTCTTGTAAATATGTACAGTCTGTTGAGCTAGCTCTATGTAGCAGGAAGCACCTTCCTGTCCCAGCCTaGCTGTCCCCGTTTGTTATT +
Preference number: 5 (lower is better)
Translates to: VSCKYVQSVELALCSRKHLPVPA*LSPFVI
Trigger: AATAACAAACGGGGACAGCAAGGCTGGGACAGGAAG...GTGCTTCCTGCTACATAGAGCTAGCTCAACAGACTGTACATATTTACAAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGCTTGATGATGTAAATTaGGAAGACTGCGCCAATCCC +
Preference number: 5 (lower is better)
Translates to: LALCSRKHFTDETRNIHLLDDVN*EDCANP
Trigger: GGGATTGGCGCAGTCTTCCAAATTTACATCATCAAG...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS-3UTR CAA 90 bp CTAGCTCTATGTAGCAGGAAGCACTTCACAGATGAGACACGCAATATACACTTGTTGATCTTCTCCAGTTaGGAATATTCTCCCACTTCA +
Preference number: 5 (lower is better)
Translates to: LALCSRKHFTDETRNIHLLIFSS*EYSPTS
Trigger: TGAAGTGGGAGAATATTCCAAACTGGAGAAGATCAA...CAAGTGTATATTGCGTGTCTCATCTGTGAAGTGCTTCCTGCTACATAGAGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051704.15
CDS GCA 72 bp CTCTGTCTTCGCCTGGCGGAGCTGGCTCTCCAGCGCTaGCCGGGCGGCCTGCAGGGCCGTCAGCTGGGACTC +
Preference number: 6 (lower is better)
Translates to: LCLRLAELALQR*PGGLQGRQLGL
Trigger: GAGTCCCAGCTGACGGCCCTGCAGGCCGCCCGGGCAGCGCTGGAGAGCCAGCTCCGCCAGGCGAAGACAGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp GCGGCCTGCAGGGCCGTCAGCTGGGACTCGCGCTCCTaGAGGGACAGCTGCAGCTCCGTGAGCTGCCGCTTC +
Preference number: 6 (lower is better)
Translates to: AACRAVSWDSRS*RDSCSSVSCRF
Trigger: GAAGCGGCAGCTCACGGAGCTGCAGCTGTCCCTGCAGGAGCGCGAGTCCCAGCTGACGGCCCTGCAGGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp TCCGGTGGCGCCGGGCTGGAGGCCACGCGTTTGGTGATGTGCTCGTaGTATGTTGGTGGGCCTCGCTTGTTGGGGCTGCTGCGGGAGGTG +
Preference number: 6 (lower is better)
Translates to: SGGAGLEATRLVMCS*YVGGPRLLGLLREV
Trigger: CACCTCCCGCAGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCCTCCAGCCCGGCGCCACCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp GGAAGAAGAGATTTAGCCTGGAGGCCCGACTGGCAATaGGCTCGGAGGCACTGGCCTCCGGCGGGTTCCGCA +
Preference number: 6 (lower is better)
Translates to: GRRDLAWRPDWQ*ARRHWPPAGSA
Trigger: TGCGGAACCCGCCGGAGGCCAGTGCCTCCGAGCCCATTGCCAGTCGGGCCTCCAGGCTAAATCTCTTCTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS CCA 72 bp TCCCCTGGAAGAAGAGATTTAGCCTGGAGGCCCGACTaGCAATGGGCTCGGAGGCACTGGCCTCCGGCGGGT +
Preference number: 6 (lower is better)
Translates to: SPGRRDLAWRPD*QWARRHWPPAG
Trigger: ACCCGCCGGAGGCCAGTGCCTCCGAGCCCATTGCCAGTCGGGCCTCCAGGCTAAATCTCTTCTTCCAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS CAA 72 bp GTGATGTGCTCGTTGTATGTTGGTGGGCCTCGCTTGTaGGGGCTGCTGCGGGAGGTGGAGGGCACCCGGTGC +
Preference number: 6 (lower is better)
Translates to: VMCSLYVGGPRL*GLLREVEGTRC
Trigger: GCACCGGGTGCCCTCCACCTCCCGCAGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp TTGGGGCTGCTGCGGGAGGTGGAGGGCACCCGGTGCTaGTCAGTGCCTGACTCCTTCACGAGGTTTCCTTTG +
Preference number: 6 (lower is better)
Translates to: LGLLREVEGTRC*SVPDSFTRFPL
Trigger: CAAAGGAAACCTCGTGAAGGAGTCAGGCACTGAGCAGCACCGGGTGCCCTCCACCTCCCGCAGCAGCCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp GCCGGGCTGGAGGCCACGCGTTTGGTGATGTGCTCGTaGTATGTTGGTGGGCCTCGCTTGTTGGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: AGLEATRLVMCS*YVGGPRLLGLL
Trigger: CAGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCCTCCAGCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp TTGCGCTGGATCTCATCTCGATGTGCCGTGAGCGCCTaGATCTCCTCCTCCGCTTCCGCGGTTGTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LRWISSRCAVSA*ISSSASAVVSS
Trigger: GGAGGAGACAACCGCGGAAGCGGAGGAGGAGATCCAGGCGCTCACGGCACATCGAGATGAGATCCAGCGCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp GGCCACGCGTTTGGTGATGTGCTCGTTGTATGTTGGTaGGCCTCGCTTGTTGGGGCTGCTGCGGGAGGTGGA +
Preference number: 6 (lower is better)
Translates to: GHAFGDVLVVCW*ASLVGAAAGGG
Trigger: TCCACCTCCCGCAGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp GGAGGCCACGCGTTTGGTGATGTGCTCGTTGTATGTTaGTGGGCCTCGCTTGTTGGGGCTGCTGCGGGAGGT +
Preference number: 6 (lower is better)
Translates to: GGHAFGDVLVVC*WASLVGAAAGG
Trigger: ACCTCCCGCAGCAGCCCCAACAAGCGAGGCCCACCAACATACAACGAGCACATCACCAAACGCGTGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp CTTCCCGGTTGTGTAGCTTCTCTAGCTCCCGCTCTGCTCGCTCCTTaGCCTGGCGGATATTCTGCAGGAGCTCGGTGGCCTCTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: LPGCVASLAPALLAP*PGGYSAGARWPLCW
Trigger: CCAGCACAGAGGCCACCGAGCTCCTGCAGAATATCCGCCAGGCAAAGGAGCGAGCAGAGCGGGAGCTAGAGAAGCTACACAACCGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp GCCGAGACTCCCTCAGCTCAGACTCGTAGAGATCGCTaGGTCTGCGGGCTGACACCAGGTCTTCTTCCAGCT +
Preference number: 6 (lower is better)
Translates to: AETPSAQTRRDR*VCGLTPGLLPA
Trigger: AGCTGGAAGAAGACCTGGTGTCAGCCCGCAGACGCAGCGATCTCTACGAGTCTGAGCTGAGGGAGTCTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp ATCTCACGGCGGAGATGGTCCACCTCACTCCGCAGCTaGACAATCTCGTCATTGGCCCCGGAAGCCTCATCG +
Preference number: 6 (lower is better)
Translates to: ISRRRWSTSLRS*TISSLAPEASS
Trigger: CGATGAGGCTTCCGGGGCCAATGACGAGATTGTGCAGCTGCGGAGTGAGGTGGACCATCTCCGCCGTGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp TGCTGCGGGAGGTGGAGGGCACCCGGTGCTGCTCAGTaGCTGACTCCTTCACGAGGTTTCCTTTGCAGCATA +
Preference number: 6 (lower is better)
Translates to: CCGRWRAPGAAQ*LTPSRGFLCSI
Trigger: TATGCTGCAAAGGAAACCTCGTGAAGGAGTCAGGCACTGAGCAGCACCGGGTGCCCTCCACCTCCCGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp AGCTGCATCTCCCGCTCCGTGATCTCACGGCGGAGATaGTCCACCTCACTCCGCAGCTGCACAATCTCGTCA +
Preference number: 6 (lower is better)
Translates to: SCISRSVISRRR*STSLRSCTISS
Trigger: TGACGAGATTGTGCAGCTGCGGAGTGAGGTGGACCATCTCCGCCGTGAGATCACGGAGCGGGAGATGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 72 bp GCTGTACGAAAATCCCACAAACGGCAGCTCTTCGCCTaGGAAGCCCGAGGGGCTCAGCTGGCACACAGAGGA +
Preference number: 6 (lower is better)
Translates to: AVRKSHKRQLFA*EARGAQLAHRG
Trigger: TCCTCTGTGTGCCAGCTGAGCCCCTCGGGCTTCTCAGGCGAAGAGCTGCCGTTTGTGGGATTTTCGTACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 72 bp CATCGAATTTGCGCTGGATCTCATCTCGATGTGCCGTaGGCGCCTGGATCTCCTCCTCCGCTTCCGCGGTTG +
Preference number: 6 (lower is better)
Translates to: HRICAGSHLDVP*APGSPPPLPRL
Trigger: CAACCGCGGAAGCGGAGGAGGAGATCCAGGCGCTCACGGCACATCGAGATGAGATCCAGCGCAAATTCGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp TCCCGCTCTGCTCGCTCCTTTGCCTGGCGGATATTCTaGAGGAGCTCGGTGGCCTCTGTGCTGGCTTTTACA +
Preference number: 6 (lower is better)
Translates to: SRSARSFAWRIF*RSSVASVLAFT
Trigger: TGTAAAAGCCAGCACAGAGGCCACCGAGCTCCTGCAGAATATCCGCCAGGCAAAGGAGCGAGCAGAGCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp ATCTTGCCCTTCTCGTGGGCCTCCTCCTCGTGTCTCTaGATCATGTTCTCCAGGCTCTCCTTGTCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: ILPFSWASSSCL*IMFSRLSLSAR
Trigger: CCTGGCCGACAAGGAGAGCCTGGAGAACATGATGCAGAGACACGAGGAGGAGGCCCACGAGAAGGGCAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp TTCAGAGCCTCCATCGTTTGCTTCTGGCTGGTGAGCTaGATCTCCCGCTCCGTGATCTCACGGCGGAGATGG +
Preference number: 6 (lower is better)
Translates to: FRASIVCFWLVS*ISRSVISRRRW
Trigger: CCATCTCCGCCGTGAGATCACGGAGCGGGAGATGCAGCTCACCAGCCAGAAGCAAACGATGGAGGCTCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp TGTGTAGCTTCTCTAGCTCCCGCTCTGCTCGCTCCTTaGCCTGGCGGATATTCTGCAGGAGCTCGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: CVASLAPALLAP*PGGYSAGARWP
Trigger: AGGCCACCGAGCTCCTGCAGAATATCCGCCAGGCAAAGGAGCGAGCAGAGCGGGAGCTAGAGAAGCTACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp GAGTGGCGGCGTTCCTCGGCTTCCACCAGCTTCTTTTaGATGCCCTCGGAGGAGTCTTCCCGGTTGTGTAGC +
Preference number: 6 (lower is better)
Translates to: EWRRSSASTSFF*MPSEESSRLCS
Trigger: GCTACACAACCGGGAAGACTCCTCCGAGGGCATCAAAAAGAAGCTGGTGGAAGCCGAGGAACGCCGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
CDS CAA 72 bp ATCGCGTTGATCATCGCCTTCTGCTCGCTGAGGATCTaGCCCTTCTCGTGGGCCTCCTCCTCGTGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: IALIIAFCSLRI*PFSWASSSCLC
Trigger: GCAGAGACACGAGGAGGAGGCCCACGAGAAGGGCAAGATCCTCAGCGAGCAGAAGGCGATGATCAACGCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp AGCTTCCGGCTCTGCTCTCGGATGTCGTGGAGAAGCTGCAGAGCTTaGTCATCCTCCTGGGACACCTCCATCCGCGCTTGCTCCAAACTT +
Preference number: 6 (lower is better)
Translates to: SFRLCSRMSWRSCRA*SSSWDTSIRACSKL
Trigger: AAGTTTGGAGCAAGCGCGGATGGAGGTGTCCCAGGAGGATGACAAAGCTCTGCAGCTTCTCCACGACATCCGAGAGCAGAGCCGGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp GCTTCCACCAGCTTCTTTTTGATGCCCTCGGAGGAGTCTTCCCGGTaGTGTAGCTTCTCTAGCTCCCGCTCTGCTCGCTCCTTTGCCTGG +
Preference number: 6 (lower is better)
Translates to: ASTSFFLMPSEESSR*CSFSSSRSARSFAW
Trigger: CCAGGCAAAGGAGCGAGCAGAGCGGGAGCTAGAGAAGCTACACAACCGGGAAGACTCCTCCGAGGGCATCAAAAAGAAGCTGGTGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp TTCTCCAGGGAGTGGCGGCGTTCCTCGGCTTCCACCAGCTTCTTTTaGATGCCCTCGGAGGAGTCTTCCCGGTTGTGTAGCTTCTCTAGC +
Preference number: 6 (lower is better)
Translates to: FSREWRRSSASTSFF*MPSEESSRLCSFSS
Trigger: GCTAGAGAAGCTACACAACCGGGAAGACTCCTCCGAGGGCATCAAAAAGAAGCTGGTGGAAGCCGAGGAACGCCGCCACTCCCTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
CDS TCA 72 bp AGTGGCGGCGTTCCTCGGCTTCCACCAGCTTCTTTTTaGTGCCCTCGGAGGAGTCTTCCCGGTTGTGTAGCT +
Preference number: 6 (lower is better)
Translates to: SGGVPRLPPASF*CPRRSLPGCVA
Trigger: AGCTACACAACCGGGAAGACTCCTCCGAGGGCATCAAAAAGAAGCTGGTGGAAGCCGAGGAACGCCGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
CDS GCA 72 bp ACAAGGCTTCGAACTTCGAAGTCTCTCGCCGACGGCTaGAGCTCCCGCAACTCGGCTATGGTGTCGGAATAC +
Preference number: 6 (lower is better)
Translates to: TRLRTSKSLADG*SSRNSAMVSEY
Trigger: GTATTCCGACACCATAGCCGAGTTGCGGGAGCTGCAGCCGTCGGCGAGAGACTTCGAAGTTCGAAGCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS GCA 72 bp AGCTTCCGGCTCTGCTCTCGGATGTCGTGGAGAAGCTaGAGAGCTTTGTCATCCTCCTGGGACACCTCCATC +
Preference number: 6 (lower is better)
Translates to: SFRLCSRMSWRS*RALSSSWDTSI
Trigger: GATGGAGGTGTCCCAGGAGGATGACAAAGCTCTGCAGCTTCTCCACGACATCCGAGAGCAGAGCCGGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp ATCGCCTTCTGCTCGCTGAGGATCTTGCCCTTCTCGTaGGCCTCCTCCTCGTGTCTCTGCATCATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: IAFCSLRILPFS*ASSSCLCIMFS
Trigger: GGAGAACATGATGCAGAGACACGAGGAGGAGGCCCACGAGAAGGGCAAGATCCTCAGCGAGCAGAAGGCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp ACCGTGCAGCTGTTGCGAAGGGCATCGAATTTGCGCTaGATCTCATCTCGATGTGCCGTGAGCGCCTGGATC +
Preference number: 6 (lower is better)
Translates to: TVQLLRRASNLR*ISSRCAVSAWI
Trigger: GATCCAGGCGCTCACGGCACATCGAGATGAGATCCAGCGCAAATTCGATGCCCTTCGCAACAGCTGCACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp GGTCCACCTCACTCCGCAGCTGCACAATCTCGTCATTaGCCCCGGAAGCCTCATCGAGTTGTTTGGACAGGT +
Preference number: 6 (lower is better)
Translates to: GPPHSAAAQSRH*PRKPHRVVWTG
Trigger: ACCTGTCCAAACAACTCGATGAGGCTTCCGGGGCCAATGACGAGATTGTGCAGCTGCGGAGTGAGGTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp TGGTCCACCTCACTCCGCAGCTGCACAATCTCGTCATaGGCCCCGGAAGCCTCATCGAGTTGTTTGGACAGG +
Preference number: 6 (lower is better)
Translates to: WSTSLRSCTISS*APEASSSCLDR
Trigger: CCTGTCCAAACAACTCGATGAGGCTTCCGGGGCCAATGACGAGATTGTGCAGCTGCGGAGTGAGGTGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp TTGGCTTCCGACAGCTCCACGATCCTCTGCTCCAGGGATCGGATCTaGGAATCCATCGCGTTGATCATCGCCTTCTGCTCGCTGAGGATC +
Preference number: 6 (lower is better)
Translates to: LASDSSTILCSRDRI*ESIALIIAFCSLRI
Trigger: GATCCTCAGCGAGCAGAAGGCGATGATCAACGCGATGGATTCCAAGATCCGATCCCTGGAGCAGAGGATCGTGGAGCTGTCGGAAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp CAGCCGACTCTTGTCACTGTGATCTTGGTGGCTGATCTTCTCCAGTaGCTCTTCCAGCTTTCGGTTCTGGGCCTCCAGCTTTCCGGCCTG +
Preference number: 6 (lower is better)
Translates to: QPTLVTVILVADLLQ*LFQLSVLGLQLSGL
Trigger: CAGGCCGGAAAGCTGGAGGCCCAGAACCGAAAGCTGGAAGAGCAACTGGAGAAGATCAGCCACCAAGATCACAGTGACAAGAGTCGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 72 bp TCTCCTCCAGCTCCTCGGCTTCCACCAGCTTCTTTTTaGTGCCCTCGGAGGAGTCTTCCCGGTTGTGTAGCT +
Preference number: 6 (lower is better)
Translates to: SPPAPRLPPASF*CPRRSLPGCVA
Trigger: AGCTACACAACCGGGAAGACTCCTCCGAGGGCATCAAAAAGAAGCTGGTGGAAGCCGAGGAGCTGGAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp ACTCCCTCAGCTCAGACTCGTAGAGATCGCTGCGTCTaGGGGCTGACACCAGGTCTTCTTCCAGCTGATTCA +
Preference number: 6 (lower is better)
Translates to: TPSAQTRRDRCV*GLTPGLLPADS
Trigger: TGAATCAGCTGGAAGAAGACCTGGTGTCAGCCCGCAGACGCAGCGATCTCTACGAGTCTGAGCTGAGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp ATGTCGTGGAGAAGCTGCAGAGCTTTGTCATCCTCCTaGGACACCTCCATCCGCGCTTGCTCCAAACTTCGC +
Preference number: 6 (lower is better)
Translates to: MSWRSCRALSSS*DTSIRACSKLR
Trigger: GCGAAGTTTGGAGCAAGCGCGGATGGAGGTGTCCCAGGAGGATGACAAAGCTCTGCAGCTTCTCCACGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp CTCTGCTCCAGGGATCGGATCTTGGAATCCATCGCGTaGATCATCGCCTTCTGCTCGCTGAGGATCTTGCCC +
Preference number: 6 (lower is better)
Translates to: LCSRDRILESIA*IIAFCSLRILP
Trigger: GGGCAAGATCCTCAGCGAGCAGAAGGCGATGATCAACGCGATGGATTCCAAGATCCGATCCCTGGAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp GACAGCTCCACGATCCTCTGCTCCAGGGATCGGATCTaGGAATCCATCGCGTTGATCATCGCCTTCTGCTCG +
Preference number: 6 (lower is better)
Translates to: DSSTILCSRDRI*ESIALIIAFCS
Trigger: CGAGCAGAAGGCGATGATCAACGCGATGGATTCCAAGATCCGATCCCTGGAGCAGAGGATCGTGGAGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp TTCCTCTGGGTGAAGAGACTGCTGTTTGCCGCAAGCTaGTTGGCTTCCGACAGCTCCACGATCCTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: FLWVKRLLFAAS*LASDSSTILCS
Trigger: GGAGCAGAGGATCGTGGAGCTGTCGGAAGCCAACAAGCTTGCGGCAAACAGCAGTCTCTTCACCCAGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp TTCTCCTCCAGCTCCTCGGCTTCCACCAGCTTCTTTTaGATGCCCTCGGAGGAGTCTTCCCGGTTGTGTAGC +
Preference number: 6 (lower is better)
Translates to: FSSSSSASTSFF*MPSEESSRLCS
Trigger: GCTACACAACCGGGAAGACTCCTCCGAGGGCATCAAAAAGAAGCTGGTGGAAGCCGAGGAGCTGGAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp TTGGAATCCATCGCGTTGATCATCGCCTTCTGCTCGCTGAGGATCTaGCCCTTCTCGTGGGCCTCCTCCTCGTGTCTCTGCATCATGTTC +
Preference number: 6 (lower is better)
Translates to: LESIALIIAFCSLRI*PFSWASSSCLCIMF
Trigger: GAACATGATGCAGAGACACGAGGAGGAGGCCCACGAGAAGGGCAAGATCCTCAGCGAGCAGAAGGCGATGATCAACGCGATGGATTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp TTCATGTTCCTCTGGGTGAAGAGACTGCTGTTTGCCGCAAGCTTGTaGGCTTCCGACAGCTCCACGATCCTCTGCTCCAGGGATCGGATC +
Preference number: 6 (lower is better)
Translates to: FMFLWVKRLLFAASL*ASDSSTILCSRDRI
Trigger: GATCCGATCCCTGGAGCAGAGGATCGTGGAGCTGTCGGAAGCCAACAAGCTTGCGGCAAACAGCAGTCTCTTCACCCAGAGGAACATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp TCCCGATGTTTCTCCTCCAGCTCCTCGGCTTCCACCAGCTTCTTTTaGATGCCCTCGGAGGAGTCTTCCCGGTTGTGTAGCTTCTCTAGC +
Preference number: 6 (lower is better)
Translates to: SRCFSSSSSASTSFF*MPSEESSRLCSFSS
Trigger: GCTAGAGAAGCTACACAACCGGGAAGACTCCTCCGAGGGCATCAAAAAGAAGCTGGTGGAAGCCGAGGAGCTGGAGGAGAAACATCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 72 bp CAGCTCAGACTCGTAGAGATCGCTGCGTCTGCGGGCTaGCACCAGGTCTTCTTCCAGCTGATTCATCATCAG +
Preference number: 6 (lower is better)
Translates to: QLRLVEIAASAG*HQVFFQLIHHQ
Trigger: CTGATGATGAATCAGCTGGAAGAAGACCTGGTGTCAGCCCGCAGACGCAGCGATCTCTACGAGTCTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp TGCTCACGTGCTTCATCTTCATCAGGGCGGGTTGGCTaGACTCTTCAAAGAGAGCGAAGAGGGCGTCTAGCA +
Preference number: 6 (lower is better)
Translates to: CSRASSSSGRVG*TLQRERRGRLA
Trigger: TGCTAGACGCCCTCTTCGCTCTCTTTGAAGAGTGCAGCCAACCCGCCCTGATGAAGATGAAGCACGTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS CCA 72 bp AAGCTGCTCACGTGCTTCATCTTCATCAGGGCGGGTTaGCTGCACTCTTCAAAGAGAGCGAAGAGGGCGTCT +
Preference number: 6 (lower is better)
Translates to: KLLTCFIFIRAG*LHSSKRAKRAS
Trigger: AGACGCCCTCTTCGCTCTCTTTGAAGAGTGCAGCCAACCCGCCCTGATGAAGATGAAGCACGTGAGCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS CAA 72 bp AAAGCTGCTCACGTGCTTCATCTTCATCAGGGCGGGTaGGCTGCACTCTTCAAAGAGAGCGAAGAGGGCGTC +
Preference number: 6 (lower is better)
Translates to: KAAHVLHLHQGG*AALFKESEEGV
Trigger: GACGCCCTCTTCGCTCTCTTTGAAGAGTGCAGCCAACCCGCCCTGATGAAGATGAAGCACGTGAGCAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS CAA 72 bp ATGTGTCCCGTCCGGTCGATGAGGATGTTCTCGGGCTaGATGTCTCGATGCACATATCCCATCTGGTGCACG +
Preference number: 6 (lower is better)
Translates to: MCPVRSMRMFSG*MSRCTYPIWCT
Trigger: CGTGCACCAGATGGGATATGTGCATCGAGACATCAAGCCCGAGAACATCCTCATCGACCGGACGGGACACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp TTCTCTCTACGCTCCATGGTCTCTAGTCTCTTTACCTaGTTCTCCAGGGAGTGGCGGCGTTCCTCGGCTTCC +
Preference number: 6 (lower is better)
Translates to: FSLRSMVSSLFT*FSREWRRSSAS
Trigger: GGAAGCCGAGGAACGCCGCCACTCCCTGGAGAACAAGGTAAAGAGACTAGAGACCATGGAGCGTAGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
CDS CAA 90 bp TTCAGTCTGTTCTCTCTACGCTCCATGGTCTCTAGTCTCTTTACCTaGTTCTCCAGGGAGTGGCGGCGTTCCTCGGCTTCCACCAGCTTC +
Preference number: 6 (lower is better)
Translates to: FSLFSLRSMVSSLFT*FSREWRRSSASTSF
Trigger: GAAGCTGGTGGAAGCCGAGGAACGCCGCCACTCCCTGGAGAACAAGGTAAAGAGACTAGAGACCATGGAGCGTAGAGAGAACAGACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
CDS CAA 90 bp ATTGGCCCCGGAAGCCTCATCGAGTTGTTTGGACAGGTAGAAGTTTaGGTTGTTGAGCTCGGCGTTGTCCTCGGTGAGCTGGTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: IGPGSLIELFGQVEV*VVELGVVLGELVQL
Trigger: CAGCTGAACCAGCTCACCGAGGACAACGCCGAGCTCAACAACCAAAACTTCTACCTGTCCAAACAACTCGATGAGGCTTCCGGGGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp CCGCAGCTGCACAATCTCGTCATTGGCCCCGGAAGCCTCATCGAGTaGTTTGGACAGGTAGAAGTTTTGGTTGTTGAGCTCGGCGTTGTC +
Preference number: 6 (lower is better)
Translates to: PQLHNLVIGPGSLIE*FGQVEVLVVELGVV
Trigger: GACAACGCCGAGCTCAACAACCAAAACTTCTACCTGTCCAAACAACTCGATGAGGCTTCCGGGGCCAATGACGAGATTGTGCAGCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 72 bp CTTCCCGGGAAAGAGCAGACATCTGCTGTTGAGTCATaGGGGGCGGTTTCCCCTGGAAGAAGAGATTTAGCC +
Preference number: 6 (lower is better)
Translates to: LPGKEQTSAVES*GAVSPGRRDLA
Trigger: GGCTAAATCTCTTCTTCCAGGGGAAACCGCCCCTCATGACTCAACAGCAGATGTCTGCTCTTTCCCGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS TCA 72 bp GTCGCCTTCTCTCTAACCACCTGCACTTCAGCGAAGTaGCCACAGCCCACAAGGCTTCGAACTTCGAAGTCT +
Preference number: 6 (lower is better)
Translates to: VAFSLTTCTSAK*PQPTRLRTSKS
Trigger: AGACTTCGAAGTTCGAAGCCTTGTGGGCTGTGGTCACTTCGCTGAAGTGCAGGTGGTTAGAGAGAAGGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS TCA 72 bp TCATCAGTTTGTGCTGACATTCGTTTGCCTTCCGCTTaGATTCCTCGGCGGCAAGCCGAGACTCCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: SSVCADIRLPSA*IPRRQAETPSA
Trigger: AGCTGAGGGAGTCTCGGCTTGCCGCCGAGGAATTCAAGCGGAAGGCAAACGAATGTCAGCACAAACTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp ACTCGGCTATGGTGTCGGAATACTTCTGGACAAAGCTaGTCACGTGCTTCATCTTCATCAGGGCGGGTTGGC +
Preference number: 6 (lower is better)
Translates to: TRLWCRNTSGQS*SRASSSSGRVG
Trigger: GCCAACCCGCCCTGATGAAGATGAAGCACGTGAGCAGCTTTGTCCAGAAGTATTCCGACACCATAGCCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS CAA 90 bp CAGCCTTGTTTCCAGCTCCAGCAGCCGACTCTTGTCACTGTGATCTaGGTGGCTGATCTTCTCCAGTTGCTCTTCCAGCTTTCGGTTCTG +
Preference number: 6 (lower is better)
Translates to: QPCFQLQQPTLVTVI*VADLLQLLFQLSVL
Trigger: CAGAACCGAAAGCTGGAAGAGCAACTGGAGAAGATCAGCCACCAAGATCACAGTGACAAGAGTCGGCTGCTGGAGCTGGAAACAAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 72 bp CCAGCAGCCGACTCTTGTCACTGTGATCTTGGTGGCTaGTCTTCTCCAGTTGCTCTTCCAGCTTTCGGTTCT +
Preference number: 6 (lower is better)
Translates to: PAADSCHCDLGG*SSPVALPAFGS
Trigger: AGAACCGAAAGCTGGAAGAGCAACTGGAGAAGATCAGCCACCAAGATCACAGTGACAAGAGTCGGCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 72 bp CTTGTTTCCAGCTCCAGCAGCCGACTCTTGTCACTGTaGTCTTGGTGGCTGATCTTCTCCAGTTGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: LVSSSSSRLLSL*SWWLIFSSCSS
Trigger: GGAAGAGCAACTGGAGAAGATCAGCCACCAAGATCACAGTGACAAGAGTCGGCTGCTGGAGCTGGAAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp ATGGTGTCGGAATACTTCTGGACAAAGCTGCTCACGTaGTTCATCTTCATCAGGGCGGGTTGGCTGCACTCT +
Preference number: 6 (lower is better)
Translates to: MVSEYFWTKLLT*FIFIRAGWLHS
Trigger: AGAGTGCAGCCAACCCGCCCTGATGAAGATGAAGCACGTGAGCAGCTTTGTCCAGAAGTATTCCGACACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS GCA 72 bp CGACAGACTCAGATCTACCAAGATACCCCAGTGCCTTaGTGTACGAAAATCCCACAAACGGCAGCTCTTCGC +
Preference number: 6 (lower is better)
Translates to: RQTQIYQDTPVP*CTKIPQTAALR
Trigger: GCGAAGAGCTGCCGTTTGTGGGATTTTCGTACAGCAAGGCACTGGGGTATCTTGGTAGATCTGAGTCTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp CGACACGACAGACTCAGATCTACCAAGATACCCCAGTaGCTTGCTGTACGAAAATCCCACAAACGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: RHDRLRSTKIPQ*LAVRKSHKRQL
Trigger: GAGCTGCCGTTTGTGGGATTTTCGTACAGCAAGGCACTGGGGTATCTTGGTAGATCTGAGTCTGTCGTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp GCTTTGTCATCCTCCTGGGACACCTCCATCCGCGCTTaGTCCAAACTTCGCTTTAAGCTACTGCATTCTGTG +
Preference number: 6 (lower is better)
Translates to: ALSSSWDTSIRA*SKLRFKLLHSV
Trigger: CACAGAATGCAGTAGCTTAAAGCGAAGTTTGGAGCAAGCGCGGATGGAGGTGTCCCAGGAGGATGACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp GTCCTTAGCCTTCATCAGTTTGTGCTGACATTCGTTTaGCTTCCGCTTGAATTCCTCGGCGGCAAGCCGAGA +
Preference number: 6 (lower is better)
Translates to: VLSLHQFVLTFV*LPLEFLGGKPR
Trigger: TCTCGGCTTGCCGCCGAGGAATTCAAGCGGAAGGCAAACGAATGTCAGCACAAACTGATGAAGGCTAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp CGGATGTTGTTCCAGTCCGTTCTGGCAAAGAAAGGGTaGCAGCAGAGACCCTCGAACTTCAGTCTCTCTTTC +
Preference number: 6 (lower is better)
Translates to: RMLFQSVLAKKG*QQRPSNFSLSF
Trigger: GAAAGAGAGACTGAAGTTCGAGGGTCTCTGCTGCCACCCTTTCTTTGCCAGAACGGACTGGAACAACATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp ATGGTCTCTAGTCTCTTTACCTTGTTCTCCAGGGAGTaGCGGCGTTCCTCGGCTTCCACCAGCTTCTTTTTG +
Preference number: 6 (lower is better)
Translates to: MVSSLFTLFSRE*RRSSASTSFFL
Trigger: CAAAAAGAAGCTGGTGGAAGCCGAGGAACGCCGCCACTCCCTGGAGAACAAGGTAAAGAGACTAGAGACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
CDS CAA 72 bp GGGAACTTCAAAAACCGCTGGAAGTTCATGATGTTGTaGAAGGTCCGGGCGGAGGTTCCCTCTGTGAATGGG +
Preference number: 6 (lower is better)
Translates to: GNFKNRWKFMML*KVRAEVPSVNG
Trigger: CCCATTCACAGAGGGAACCTCCGCCCGGACCTTCAACAACATCATGAACTTCCAGCGGTTTTTGAAGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp TTCCAGCTCCAGCAGCCGACTCTTGTCACTGTGATCTaGGTGGCTGATCTTCTCCAGTTGCTCTTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: FQLQQPTLVTVI*VADLLQLLFQL
Trigger: AAGCTGGAAGAGCAACTGGAGAAGATCAGCCACCAAGATCACAGTGACAAGAGTCGGCTGCTGGAGCTGGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp GGAAGCCTCATCGAGTTGTTTGGACAGGTAGAAGTTTaGGTTGTTGAGCTCGGCGTTGTCCTCGGTGAGCTG +
Preference number: 6 (lower is better)
Translates to: GSLIELFGQVEV*VVELGVVLGEL
Trigger: CAGCTCACCGAGGACAACGCCGAGCTCAACAACCAAAACTTCTACCTGTCCAAACAACTCGATGAGGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp AGACTCGACACGACAGACTCAGATCTACCAAGATACCCCAGTGCCTaGCTGTACGAAAATCCCACAAACGGCAGCTCTTCGCCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: RLDTTDSDLPRYPSA*LYENPTNGSSSPEK
Trigger: CTTCTCAGGCGAAGAGCTGCCGTTTGTGGGATTTTCGTACAGCAAGGCACTGGGGTATCTTGGTAGATCTGAGTCTGTCGTGTCGAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 72 bp AGATCATCTCTTCCTGGGCCTTCATGTTCCTCTGGGTaGAGAGACTGCTGTTTGCCGCAAGCTTGTTGGCTT +
Preference number: 6 (lower is better)
Translates to: RSSLPGPSCSSG*RDCCLPQACWL
Trigger: AAGCCAACAAGCTTGCGGCAAACAGCAGTCTCTTCACCCAGAGGAACATGAAGGCCCAGGAAGAGATGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 72 bp TTCCGGCCTGCGTCTCCAGGTAAAATTTCTGCTGCCTaGGTTCTGAGATCATCTCTTCCTGGGCCTTCATGT +
Preference number: 6 (lower is better)
Translates to: FRPASPGKISAA*VLRSSLPGPSC
Trigger: ACATGAAGGCCCAGGAAGAGATGATCTCAGAACTCAGGCAGCAGAAATTTTACCTGGAGACGCAGGCCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp GAATTCATCTTAGCGGCTGATCCAAAATCCACCAGCTaGATGTGTCCCGTCCGGTCGATGAGGATGTTCTCG +
Preference number: 6 (lower is better)
Translates to: EFILAADPKSTS*MCPVRSMRMFS
Trigger: CGAGAACATCCTCATCGACCGGACGGGACACATCAAGCTGGTGGATTTTGGATCAGCCGCTAAGATGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp ACGACAGACTCAGATCTACCAAGATACCCCAGTGCCTaGCTGTACGAAAATCCCACAAACGGCAGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: TTDSDLPRYPSA*LYENPTNGSSS
Trigger: CGAAGAGCTGCCGTTTGTGGGATTTTCGTACAGCAAGGCACTGGGGTATCTTGGTAGATCTGAGTCTGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS GCA 72 bp GAAAGGCGTACTGTAACTGGGGGATCCAAGGACTCGTaGTCCGAGATAATATGTTCCTCTCCTCCTCGAAAA +
Preference number: 6 (lower is better)
Translates to: ERRTVTGGSKDS*SEIICSSPPRK
Trigger: TTTTCGAGGAGGAGAGGAACATATTATCTCGGAGCACGAGTCCTTGGATCCCCCAGTTACAGTACGCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000137952.8
ENSMUST00000141101.5
ENSMUST00000148245.8
CDS CAA 72 bp TCTGGGAACTTCAAAAACCGCTGGAAGTTCATGATGTaGTTGAAGGTCCGGGCGGAGGTTCCCTCTGTGAAT +
Preference number: 6 (lower is better)
Translates to: SGNFKNRWKFMM*LKVRAEVPSVN
Trigger: ATTCACAGAGGGAACCTCCGCCCGGACCTTCAACAACATCATGAACTTCCAGCGGTTTTTGAAGTTCCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp CACAATCTCGTCATTGGCCCCGGAAGCCTCATCGAGTaGTTTGGACAGGTAGAAGTTTTGGTTGTTGAGCTC +
Preference number: 6 (lower is better)
Translates to: HNLVIGPGSLIE*FGQVEVLVVEL
Trigger: GAGCTCAACAACCAAAACTTCTACCTGTCCAAACAACTCGATGAGGCTTCCGGGGCCAATGACGAGATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS TCA 72 bp AACTTCAGTCTCTCTTTCTGGACACACAGCAGACTCTaGAGCAGATCAAGGAGCTCACTGCTAACTTTGGGG +
Preference number: 6 (lower is better)
Translates to: NFSLSFWTHSRL*SRSRSSLLTLG
Trigger: CCCCAAAGTTAGCAGTGAGCTCCTTGATCTGCTTCAGAGTCTGCTGTGTGTCCAGAAAGAGAGACTGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp TCAACACTTCCGGAGCCATGTAATCCGGGGTCCCAATaGGGAGTTTGGCATCCACCTTATTTGAATTCATCT +
Preference number: 6 (lower is better)
Translates to: STLPEPCNPGSQ*GVWHPPYLNSS
Trigger: AGATGAATTCAAATAAGGTGGATGCCAAACTCCCCATTGGGACCCCGGATTACATGGCTCCGGAAGTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CCA 72 bp GGATGTCATCCTTCAGTCTGTTCTCTCTACGCTCCATaGTCTCTAGTCTCTTTACCTTGTTCTCCAGGGAGT +
Preference number: 6 (lower is better)
Translates to: GCHPSVCSLYAP*SLVSLPCSPGS
Trigger: ACTCCCTGGAGAACAAGGTAAAGAGACTAGAGACCATGGAGCGTAGAGAGAACAGACTGAAGGATGACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
CDS CCA 72 bp TTATCAGCCATCTGCTGGATCTGTTCGGACTTTGTCTaGATGTCATCCTTCAGTCTGTTCTCTCTACGCTCC +
Preference number: 6 (lower is better)
Translates to: LSAICWICSDFV*MSSFSLFSLRS
Trigger: GGAGCGTAGAGAGAACAGACTGAAGGATGACATCCAGACAAAGTCCGAACAGATCCAGCAGATGGCTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
CDS CAA 72 bp GATGAAACCCACGAATTCTTCTCTGGTTCATCAAAATaGGAGGTGTCATCGTCAGACTTGAGGGTGGGGACG +
Preference number: 6 (lower is better)
Translates to: DETHEFFSGSSK*EVSSSDLRVGT
Trigger: CGTCCCCACCCTCAAGTCTGACGATGACACCTCCAATTTTGATGAACCAGAGAAGAATTCGTGGGTTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 90 bp CCGGGTCATTTCCTGCTCCATCTTGTGACACTTGTCCTGGGAGTCTaGGAGCTCTTTGCTTTTGATGAGAAGTTTCTTTTCCATGGAGCT +
Preference number: 6 (lower is better)
Translates to: PGHFLLHLVTLVLGV*ELFAFDEKFLFHGA
Trigger: AGCTCCATGGAAAAGAAACTTCTCATCAAAAGCAAAGAGCTCCAAGACTCCCAGGACAAGTGTCACAAGATGGAGCAGGAAATGACCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp TTCCTGCTCCATCTTGTGACACTTGTCCTGGGAGTCTaGGAGCTCTTTGCTTTTGATGAGAAGTTTCTTTTC +
Preference number: 6 (lower is better)
Translates to: FLLHLVTLVLGV*ELFAFDEKFLF
Trigger: GAAAAGAAACTTCTCATCAAAAGCAAAGAGCTCCAAGACTCCCAGGACAAGTGTCACAAGATGGAGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5
CDS CAA 72 bp GAATTTTATCAGCCATCTGCTGGATCTGTTCGGACTTaGTCTGGATGTCATCCTTCAGTCTGTTCTCTCTAC +
Preference number: 6 (lower is better)
Translates to: EFYQPSAGSVRT*SGCHPSVCSLY
Trigger: GTAGAGAGAACAGACTGAAGGATGACATCCAGACAAAGTCCGAACAGATCCAGCAGATGGCTGATAAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
CDS GCA 72 bp CAGCCAAAATCAGCTCAGCAAGGTAAAACTGGATCATaGTCTCATCTAATTGGTCCTCGTATCTGTTCAGAA +
Preference number: 6 (lower is better)
Translates to: QPKSAQQGKTGS*SHLIGPRICSE
Trigger: TTCTGAACAGATACGAGGACCAATTAGATGAGAGCATGATCCAGTTTTACCTTGCTGAGCTGATTTTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051704.15
ENSMUST00000102560.7
ENSMUST00000112008.9
ENSMUST00000141101.5