Pregenerated sensors for CISH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032578Ensembl transcript IDs: ENSMUST00000085102.6, ENSMUST00000167072.2, ENSMUST00000168260.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCGGGCGCTGCTCCTGCGCACAAAGGGCTGCACCAGTTTCAGGTaGACTGCAGTAGCCACGGGGATAGGCAGCACCGAGTCACTAGGT | + |
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Preference number: 1 (lower is better) Translates to: LRALLLRTKGCTSFR*TAVATGIGSTESLG Trigger: ACCTAGTGACTCGGTGCTGCCTATCCCCGTGGCTACTGCAGTGCACCTGAAACTGGTGCAGCCCTTTGTGCGCAGGAGCAGCGCCCGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR GCA 90 bp | GGCGCTGCTCCTGCGCACAAAGGGCTGCACCAGTTTCAGGTGCACTaGAGTAGCCACGGGGATAGGCAGCACCGAGTCACTAGGTGCATC | + |
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Preference number: 1 (lower is better) Translates to: GAAPAHKGLHQFQVH*SSHGDRQHRVTRCI Trigger: GATGCACCTAGTGACTCGGTGCTGCCTATCCCCGTGGCTACTGCAGTGCACCTGAAACTGGTGCAGCCCTTTGTGCGCAGGAGCAGCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR CCA 90 bp | TTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCTTaGATAAGCATCCACTTCCCGACCCAGCACACGCCCCTCGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: FLGRKRTQGSYICGP*ISIHFPTQHTPLGR Trigger: CCTGCCGAGGGGCGTGTGCTGGGTCGGGAAGTGGATGCTTATCCAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR TCA 90 bp | TCCGGGTGTCAGCTGCACAGGAGGCCACATAGTGCTGCACAAGGCTaGCCACATCTGGGAAGGCCAGGATTCGAGGTCTTGACAAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: SGCQLHRRPHSAAQG*PHLGRPGFEVLTSS Trigger: ACTGCTTGTCAAGACCTCGAATCCTGGCCTTCCCAGATGTGGTCAGCCTTGTGCAGCACTATGTGGCCTCCTGTGCAGCTGACACCCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR TCA 90 bp | TCGCTATTCTATACATGGGTAGGGGGCCTGCCCTACTCAGCAGACTaGGAAACCAGGGCTGGGAGAATAGACACAGTTCAGGTGGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: SLFYTWVGGLPYSAD*ETRAGRIDTVQVAR Trigger: CCTTGCCACCTGAACTGTGTCTATTCTCCCAGCCCTGGTTTCTCAGTCTGCTGAGTAGGGCAGGCCCCCTACCCATGTATAGAATAGCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR GCA 90 bp | AGTGAGTGGAGACCTAGGTCCAGCCTCTGTGGAGAGACGAGGTCCTaGCTGTCTCGCTCTGATACATGGCTCACCACAAAGAGCCATATT | + |
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Preference number: 1 (lower is better) Translates to: SEWRPRSSLCGETRS*LSRSDTWLTTKSHI Trigger: AATATGGCTCTTTGTGGTGAGCCATGTATCAGAGCGAGACAGGCAGGACCTCGTCTCTCCACAGAGGCTGGACCTAGGTCTCCACTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR CCA 90 bp | AGCCCAGTCTGCGTCCCCGTAAGGGGCCTTGGCATGATCAACCTCTaGCTGATATTCTCCCAGAAACAGGCTCGCTATTCTATACATGGG | + |
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Preference number: 1 (lower is better) Translates to: SPVCVPVRGLGMINL*LIFSQKQARYSIHG Trigger: CCCATGTATAGAATAGCGAGCCTGTTTCTGGGAGAATATCAGCCAGAGGTTGATCATGCCAAGGCCCCTTACGGGGACGCAGACTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR GCA 90 bp | CTAGAGGCGTTGACCTCAGAGTTGTGTGACAATCCCTCCTCCACCTaGCTTGTTCTTGCTGGCATTCTCTGGTCCAGCTGTCACATGCAT | + |
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Preference number: 1 (lower is better) Translates to: LEALTSELCDNPSST*LVLAGILWSSCHMH Trigger: ATGCATGTGACAGCTGGACCAGAGAATGCCAGCAAGAACAAGGCAGGTGGAGGAGGGATTGTCACACAACTCTGAGGTCAACGCCTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR CCA 90 bp | ACATCCATACACAGGTGGATGGGCCCAGGACATTCAGGACTACTTTaGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGGAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: TSIHRWMGPGHSGLL*AQQCFGMGVSTGKN Trigger: GTTCTTCCCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGAATGTCCTGGGCCCATCCACCTGTGTATGGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR TCA 90 bp | ACAAAGAGCCATATTGTACCTAGAGGCGTTGACCTCAGAGTTGTGTaGCAATCCCTCCTCCACCTGCCTTGTTCTTGCTGGCATTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: TKSHIVPRGVDLRVV*QSLLHLPCSCWHSL Trigger: CAGAGAATGCCAGCAAGAACAAGGCAGGTGGAGGAGGGATTGTCACACAACTCTGAGGTCAACGCCTCTAGGTACAATATGGCTCTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR GCA 90 bp | TCCTCATGGCACTTCAGTACACTTTTATCCACTGTACTTTCTCCTTaGAAGGCCGGCCTGAGTTCTGTGGCTCCTCTTGGCAAGTTACTG | + |
|
Preference number: 1 (lower is better) Translates to: SSWHFSTLLSTVLSP*KAGLSSVAPLGKLL Trigger: CAGTAACTTGCCAAGAGGAGCCACAGAACTCAGGCCGGCCTTGCAAGGAGAAAGTACAGTGGATAAAAGTGTACTGAAGTGCCATGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR TCA 90 bp | CTGGCAAAGCCTATGGAGTCATTGAAGTTTTGGCTTTTCCAGATGTaGCGTGGATCGAGACACGAGAATCAAAGAGGTCAAACCACGCGA | + |
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Preference number: 1 (lower is better) Translates to: LAKPMESLKFWLFQM*RGSRHENQRGQTTR Trigger: TCGCGTGGTTTGACCTCTTTGATTCTCGTGTCTCGATCCACGTCACATCTGGAAAAGCCAAAACTTCAATGACTCCATAGGCTTTGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR TCA 90 bp | CGAGAATCAAAGAGGTCAAACCACGCGAAACTCCAGACACCCCACTaGAGGCTTCATAAGTGGAAGGCATACTTTTATTATCATTACAGA | + |
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Preference number: 1 (lower is better) Translates to: RESKRSNHAKLQTPH*RLHKWKAYFYYHYR Trigger: TCTGTAATGATAATAAAAGTATGCCTTCCACTTATGAAGCCTTCAGTGGGGTGTCTGGAGTTTCGCGTGGTTTGACCTCTTTGATTCTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTGCGGCCCTTGGATAAGCATCCACTTCCCGACCCAGCACACGCCCCTCGGCCATGGTGCTGCCCTGTaGGGAGAAGAGTGGGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: ICGPWISIHFPTQHTPLGHGAAL*GEEWEP Trigger: GGGCTCCCACTCTTCTCCTCACAGGGCAGCACCATG...GCCGAGGGGCGTGTGCTGGGTCGGGAAGTGGATGCTTATCCAAGGGCCGCAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR CAA 90 bp | ATACGCCGGGGCAGGGGTAGGCAGTCCACGTCGGCCACCAGACGGTaGATGACTAGCCGACACAGATGTTGTAAGCTGCGGGCGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: IRRGRGRQSTSATRR*MTSRHRCCKLRALL Trigger: GAGCAGCGCCCGCAGCTTACAACATCTGTGTCGGCTAGTCATCAACCGTCTGGTGGCCGACGTGGACTGCCTACCCCTGCCCCGGCGTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR CAA 90 bp | CTTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCTaGGATAAGCATCCACTTCCCGACCCAGCACACGCCCCTCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LPRQETDTRELHLRP*DKHPLPDPAHAPRQ Trigger: CTGCCGAGGGGCGTGTGCTGGGTCGGGAAGTGGATGCTTATCCAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTGCGGCCCTTGGATAAGCATCCACTTCCCGACCCAGCACACGCCCCTCGGCGGAGAGACGAGGTCCTaGCTGTCTCGCTCTGATACA | + |
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Preference number: 2 (lower is better) Translates to: ICGPWISIHFPTQHTPLGGETRS*LSRSDT Trigger: TGTATCAGAGCGAGACAGGCAGGACCTCGTCTCTCC...GCCGAGGGGCGTGTGCTGGGTCGGGAAGTGGATGCTTATCCAAGGGCCGCAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGCAGAGAAGTGGGATGGCTCACGCCATCATTCCACCCCCAACCCCTGCAAGGCTCCGGGTGTCAGCTaGACAGGAGGCCACATAGTG | + |
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Preference number: 2 (lower is better) Translates to: RAEKWDGSRHHSTPNPCKAPGVS*TGGHIV Trigger: CACTATGTGGCCTCCTGTGCAGCTGACACCCGGAGC...CTTGCAGGGGTTGGGGGTGGAATGATGGCGTGAGCCATCCCACTTCTCTGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCTCTATGAAGCCATGGTGCTGCCCTGTGAGGAGAAGAGTGGGAGCCCTAGACATAGGCAGGGCTaGGGTGGGAGCAGGATCCGG | + |
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Preference number: 2 (lower is better) Translates to: SQLYEAMVLPCEEKSGSPRHRQG*GGSRIR Trigger: CCGGATCCTGCTCCCACCCCAGCCCTGCCTATGTCT...AGGGCTCCCACTCTTCTCCTCACAGGGCAGCACCATGGCTTCATAGAGCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCCTGCGCACAAAGGGCTGCACCAGTTTCAGGTGCACTGCAGTAGCCACGAACCCCAAGTCCAGCTaGGGACTGTGTTCCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LLLRTKGCTSFRCTAVATNPKSS*GLCSLQ Trigger: CTGGAGGGAACACAGTCCCCAGCTGGACTTGGGGTT...CGTGGCTACTGCAGTGCACCTGAAACTGGTGCAGCCCTTTGTGCGCAGGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAACTTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCTTGAGACCTGGGGGTCTCTaGACCACCCAGAGCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: RQLPRQETDTRELHLRPLRPGGL*TTQSTG Trigger: CCCTGTGCTCTGGGTGGTCCAGAGACCCCCAGGTCT...CAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAAGTTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGCAACTTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCGTTCCCTCCAGGATGTaGCTGTGTGAGGCAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CRQLPRQETDTRELHLRPVPSRM*LCEAEQ Trigger: CTGCTCTGCCTCACACAGTCACATCCTGGAGGGAAC...GGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAAGTTGCCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCTCTATGAAGCCATGGTGCTGCCCTGTGAGGAGAAGAGTGGGAGCCCTAACCCCAAGTCCAGCTaGGGACTGTGTTCCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SQLYEAMVLPCEEKSGSPNPKSS*GLCSLQ Trigger: CTGGAGGGAACACAGTCCCCAGCTGGACTTGGGGTT...AGGGCTCCCACTCTTCTCCTCACAGGGCAGCACCATGGCTTCATAGAGCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCCCTTGTGTTTCTGGCTCCTGTCTGTCTGGCCACCCAGCCTCCCAAAAGGGCAGAGAAGTGGGATaGCTCACGCCATCATTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GSPCVSGSCLSGHPASQKGREVG*LTPSFH Trigger: GTGGAATGATGGCGTGAGCCATCCCACTTCTCTGCC...CTTTTGGGAGGCTGGGTGGCCAGACAGACAGGAGCCAGAAACACAAGGGCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGCGGCCCTTGGATAAGCATCCACTTCCCGACCCAGCACACGCCCCTCGGCACATCCATACACAGGTaGATGGGCCCAGGACATTCA | + |
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Preference number: 2 (lower is better) Translates to: ICGPWISIHFPTQHTPLGTSIHR*MGPGHS Trigger: TGAATGTCCTGGGCCCATCCACCTGTGTATGGATGT...GCCGAGGGGCGTGTGCTGGGTCGGGAAGTGGATGCTTATCCAAGGGCCGCAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAGAGTGGGAGCCCTTGTGTTTCTGGCTCCTGTCTGTCTGGCCACCCAGCGAGCCCTTGTGTTTCTaGCTCCTGTCTGTCTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: GEEWEPLCFWLLSVWPPSEPLCF*LLSVWP Trigger: TGGCCAGACAGACAGGAGCCAGAAACACAAGGGCTC...GCTGGGTGGCCAGACAGACAGGAGCCAGAAACACAAGGGCTCCCACTCTTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGAGAAGTGGGATGGCTCACGCCATCATTCCACCCCCAACCCCTGCAAGTGGCTCAGTCAGAGTTaGAAGGGGTACTGTCGGAGG | + |
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Preference number: 2 (lower is better) Translates to: RAEKWDGSRHHSTPNPCKWLSQS*KGYCRR Trigger: CCTCCGACAGTACCCCTTCCAACTCTGACTGAGCCA...CTTGCAGGGGTTGGGGGTGGAATGATGGCGTGAGCCATCCCACTTCTCTGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTTGTGTTTCTGGCTCCTGTCTGTCTGGCCACCCAGCCTCCCAAAAGAGGGCAGAGCAGGGTGCCTaGCTCAGTCAGAGTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SPCVSGSCLSGHPASQKRAEQGA*LSQSWK Trigger: CTTCCAACTCTGACTGAGCCAGGCACCCTGCTCTGC...CCTCTTTTGGGAGGCTGGGTGGCCAGACAGACAGGAGCCAGAAACACAAGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGACCACCCAGAGCACAGGGCAGAGAAGTGGGATGGCTCACGCCATCATTCCCTGCCTGTCTCGCTCTaGTACATGGCTCACCACAAA | + |
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Preference number: 2 (lower is better) Translates to: LDHPEHRAEKWDGSRHHSLPVSL*YMAHHK Trigger: TTTGTGGTGAGCCATGTATCAGAGCGAGACAGGCAG...GGAATGATGGCGTGAGCCATCCCACTTCTCTGCCCTGTGCTCTGGGTGGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAGAGTGGGAGCCCTTGTGTTTCTGGCTCCTGTCTGTCTGGCCACCCAGCATGAAGCCATGGTGCTaGCCTGTGAGGAGAAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: GEEWEPLCFWLLSVWPPSMKPWC*PVRRRV Trigger: CACTCTTCTCCTCACAGGGCAGCACCATGGCTTCAT...GCTGGGTGGCCAGACAGACAGGAGCCAGAAACACAAGGGCTCCCACTCTTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTTGTGTTTCTGGCTCCTGTCTGTCTGGCCACCCAGCCTCCCAAAAGAGGCTGCGCACAAAGGGCTaGACCAGTTTCAGGTGCACT | + |
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Preference number: 2 (lower is better) Translates to: SPCVSGSCLSGHPASQKRLRTKG*TSFRCT Trigger: AGTGCACCTGAAACTGGTGCAGCCCTTTGTGCGCAG...CCTCTTTTGGGAGGCTGGGTGGCCAGACAGACAGGAGCCAGAAACACAAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGGAAGAAGACCTGGGGGTCTCTaGACCACCCAGAGCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: QDYFGPNNVLGWGSPQGRRPGGL*TTQSTG Trigger: CCCTGTGCTCTGGGTGGTCCAGAGACCCCCAGGTCT...TCTTCCCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGAGCACAGGGCAGAGAAGTGGGATGGCTCACGCCATCATTCCACCCCCACATCCATACACAGGTaGATGGGCCCAGGACATTCA | + |
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Preference number: 2 (lower is better) Translates to: HPEHRAEKWDGSRHHSTPTSIHR*MGPGHS Trigger: TGAATGTCCTGGGCCCATCCACCTGTGTATGGATGT...GGGGGTGGAATGATGGCGTGAGCCATCCCACTTCTCTGCCCTGTGCTCTGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCAACTTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCTTGGGAGAGACGAGGTCCTaGCTGTCTCGCTCTGATACA | + |
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Preference number: 2 (lower is better) Translates to: RQLPRQETDTRELHLRPLGETRS*LSRSDT Trigger: TGTATCAGAGCGAGACAGGCAGGACCTCGTCTCTCC...CAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAAGTTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGGAAGGGGCAGGCAAGTGAGTaGAGACCTAGGTCCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SGLLWAQQCFGMGVSTGKGQASE*RPRSSL Trigger: GAGGCTGGACCTAGGTCTCCACTCACTTGCCTGCCC...CTTCCCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGCTCTATGAAGCCATGGTGCTGCCCTGTGAGGAGAAGAGTGGGAGCCCTAATCCCTCCTCCACCTaGCTTGTTCTTGCTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: SQLYEAMVLPCEEKSGSPNPSST*LVLAGI Trigger: AATGCCAGCAAGAACAAGGCAGGTGGAGGAGGGATT...AGGGCTCCCACTCTTCTCCTCACAGGGCAGCACCATGGCTTCATAGAGCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAGGCAACTTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCTCTATGAAGCCATGGTaGTGCCCTGTGAGGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: CRQLPRQETDTRELHLRPSMKPW*CPVRRR Trigger: TCTTCTCCTCACAGGGCAGCACCATGGCTTCATAGA...GGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAAGTTGCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGAGCACAGGGCAGAGAAGTGGGATGGCTCACGCCATCATTCCACCCCCGGCATGATCAACCTCTaGCTGATATTCTCCCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: HPEHRAEKWDGSRHHSTPGMINL*LIFSQK Trigger: TTTCTGGGAGAATATCAGCCAGAGGTTGATCATGCC...GGGGGTGGAATGATGGCGTGAGCCATCCCACTTCTCTGCCCTGTGCTCTGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCACCTGCCTTGTTCTTGCTGGCATTCTCTGGTCCAGCTGTCACATGCAAGGCACCAGGATGACTaGAGAAAGGACAGCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: LLHLPCSCWHSLVQLSHARHQDD*RKDSRT Trigger: GGTTCTGCTGTCCTTTCTTCAGTCATCCTGGTGCCT...TGCATGTGACAGCTGGACCAGAGAATGCCAGCAAGAACAAGGCAGGTGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGACAATCCCTCCTCCACCTGCCTTGTTCTTGCTGGCATTCTCTGGTCCAGCAGGCACCAGGATGACTaGAGAAAGGACAGCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: CDNPSSTCLVLAGILWSSRHQDD*RKDSRT Trigger: GGTTCTGCTGTCCTTTCTTCAGTCATCCTGGTGCCT...GCTGGACCAGAGAATGCCAGCAAGAACAAGGCAGGTGGAGGAGGGATTGTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGTGGGATGGCTCACGCCATCATTCCACCCCCAACCCCTGCAAGGAGAATAATCCCTCCTCCACCTaGCTTGTTCTTGCTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: EKWDGSRHHSTPNPCKENNPSST*LVLAGI Trigger: AATGCCAGCAAGAACAAGGCAGGTGGAGGAGGGATT...ATTCTCCTTGCAGGGGTTGGGGGTGGAATGATGGCGTGAGCCATCCCACTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR-3UTR CCA 90 bp | GACACCCTCATACTTCAGCAGGATCCCAGCAGCCTACATATTCCCGAGTCAGACAAGGCTGACCACATCTaGGAAGGCCAGGATTCGAGG | + |
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Preference number: 2 (lower is better) Translates to: DTLILQQDPSSLHIPESDKADHI*EGQDSR Trigger: CCTCGAATCCTGGCCTTCCCAGATGTGGTCAGCCTT...GTCTGACTCGGGAATATGTAGGCTGCTGGGATCCTGCTGAAGTATGAGGGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR CAA 90 bp | CACATCCATACACAGGTGGATGGGCCCAGGACATTCAGGACTACTTaGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: HIHTQVDGPRTFRTT*GPTMFWDGGLHREE Trigger: TTCTTCCCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGAATGTCCTGGGCCCATCCACCTGTGTATGGATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR CAA 90 bp | CCCGCCCCGCAGCCCTCTGGCAAAGCCTATGGAGTCATTGAAGTTTaGGCTTTTCCAGATGTGACGTGGATCGAGACACGAGAATCAAAG | + |
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Preference number: 2 (lower is better) Translates to: PAPQPSGKAYGVIEV*AFPDVTWIETRESK Trigger: CTTTGATTCTCGTGTCTCGATCCACGTCACATCTGGAAAAGCCAAAACTTCAATGACTCCATAGGCTTTGCCAGAGGGCTGCGGGGCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTTGTAGATCCTCTGCTGCCTGCTTCTCACATATCCACAGCACAATGGATGTTCCCTCCAGGATGTaGCTGTGTGAGGCAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: WACRSSAACFSHIHSTMDVPSRM*LCEAEQ Trigger: CTGCTCTGCCTCACACAGTCACATCCTGGAGGGAAC...ATCCATTGTGCTGTGGATATGTGAGAAGCAGGCAGCAGAGGATCTACAAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGACATTCAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCAGACCTCAGAGTTGTGTaGCAATCCCTCCTCCACCTG | + |
|
Preference number: 2 (lower is better) Translates to: QDIQDYFGPNNVLGWGSPDLRVV*QSLLHL Trigger: CAGGTGGAGGAGGGATTGTCACACAACTCTGAGGTC...TGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGAATGTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGGAAGCTGCCTGTCTCGCTCTaGTACATGGCTCACCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: SGLLWAQQCFGMGVSTGKLPVSL*YMAHHK Trigger: TTTGTGGTGAGCCATGTATCAGAGCGAGACAGGCAG...CTTCCCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCAACTTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCTTGCTGAGAAACCAGGGCTaGGAGAATAGACACAGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RQLPRQETDTRELHLRPLLRNQG*ENRHSS Trigger: TGAACTGTGTCTATTCTCCCAGCCCTGGTTTCTCAG...CAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAAGTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAGCTCTATGAAGCCATGGTGCTGCCCTGTGAGGAGAAGAGTGGGAGCCCTGGCATGATCAACCTCTaGCTGATATTCTCCCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SQLYEAMVLPCEEKSGSPGMINL*LIFSQK Trigger: TTTCTGGGAGAATATCAGCCAGAGGTTGATCATGCC...AGGGCTCCCACTCTTCTCCTCACAGGGCAGCACCATGGCTTCATAGAGCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCAACTTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCTTGAACAATGTTTTGGGATaGGGGTCTCCACAGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RQLPRQETDTRELHLRPLNNVLG*GSPQGR Trigger: TCTTCCCTGTGGAGACCCCCATCCCAAAACATTGTT...CAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAAGTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CCA 90 bp | CCGCAGCCCTCTGGCAAAGCCTATGGAGTCATTGAAGTTTTGGCTTTTCCAGATTGGCTCCTGTCTGTCTaGCCACCCAGCCTCCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: PQPSGKAYGVIEVLAFPDWLLSV*PPSLPK Trigger: TTTTGGGAGGCTGGGTGGCCAGACAGACAGGAGCCA...ATCTGGAAAAGCCAAAACTTCAATGACTCCATAGGCTTTGCCAGAGGGCTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGGAAGATCACTAGGTGCATCTTaGTTAGACATAGGCAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: QDYFGPNNVLGWGSPQGRSLGAS*LDIGRA Trigger: AGCCCTGCCTATGTCTAAGCAAGATGCACCTAGTGA...TCTTCCCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR-3UTR GCA 90 bp | GACACCCTCATACTTCAGCAGGATCCCAGCAGCCTACATATTCCCGAGTCAGACCACCGAGTCACTAGGTaGATCTTGCTTAGACATAGG | + |
|
Preference number: 2 (lower is better) Translates to: DTLILQQDPSSLHIPESDHRVTR*ILLRHR Trigger: CCTATGTCTAAGCAAGATGCACCTAGTGACTCGGTG...GTCTGACTCGGGAATATGTAGGCTGCTGGGATCCTGCTGAAGTATGAGGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGACATTCAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACTTGCTGGCATTCTCTaGTCCAGCTGTCACATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: QDIQDYFGPNNVLGWGSPLAGIL*SSCHMH Trigger: ATGCATGTGACAGCTGGACCAGAGAATGCCAGCAAG...TGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGAATGTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGGAAGCTGAGAAACCAGGGCTaGGAGAATAGACACAGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SGLLWAQQCFGMGVSTGKLRNQG*ENRHSS Trigger: TGAACTGTGTCTATTCTCCCAGCCCTGGTTTCTCAG...CTTCCCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR CAA 90 bp | TCACCACAAAGAGCCATATTGTACCTAGAGGCGTTGACCTCAGAGTaGTGTGACAATCCCTCCTCCACCTGCCTTGTTCTTGCTGGCATT | + |
|
Preference number: 2 (lower is better) Translates to: SPQRAILYLEALTSE*CDNPSSTCLVLAGI Trigger: AATGCCAGCAAGAACAAGGCAGGTGGAGGAGGGATTGTCACACAACTCTGAGGTCAACGCCTCTAGGTACAATATGGCTCTTTGTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAACTTTGCTGTGACACCCTCATACTTCAGCAGGATCCCAGCAGCCTACATACTTGCTGGCATTCTCTaGTCCAGCTGTCACATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: RNFAVTPSYFSRIPAAYILAGIL*SSCHMH Trigger: ATGCATGTGACAGCTGGACCAGAGAATGCCAGCAAG...TATGTAGGCTGCTGGGATCCTGCTGAAGTATGAGGGTGTCACAGCAAAGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR CAA 90 bp | ATCCTCATGGCACTTCAGTACACTTTTATCCACTGTACTTTCTCCTaGCAAGGCCGGCCTGAGTTCTGTGGCTCCTCTTGGCAAGTTACT | + |
|
Preference number: 2 (lower is better) Translates to: ILMALQYTFIHCTFS*QGRPEFCGSSWQVT Trigger: AGTAACTTGCCAAGAGGAGCCACAGAACTCAGGCCGGCCTTGCAAGGAGAAAGTACAGTGGATAAAAGTGTACTGAAGTGCCATGAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR CAA 90 bp | CTTGTATTTCTGATGTTCAAGATCTCGACTAAGAGAAGAGTCCTCTaGACTCCAAACGGCCTGAGCCAGAATTTTGACACTACCAGACCT | + |
|
Preference number: 2 (lower is better) Translates to: LVFLMFKISTKRRVL*TPNGLSQNFDTTRP Trigger: AGGTCTGGTAGTGTCAAAATTCTGGCTCAGGCCGTTTGGAGTCAAGAGGACTCTTCTCTTAGTCGAGATCTTGAACATCAGAAATACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR GCA 72 bp | GGGAGCAGGATCCGGGCTGTCGCTCCGGGTGTCAGCTaGACAGGAGGCCACATAGTGCTGCACAAGGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GSRIRAVAPGVS*TGGHIVLHKAD Trigger: GTCAGCCTTGTGCAGCACTATGTGGCCTCCTGTGCAGCTGACACCCGGAGCGACAGCCCGGATCCTGCTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGCGGCCCTTGGATAAGCATCCACTTCCCGACCCAGCACACGCCCCTCGGCGGGCCCAACAATGTTTaGGGATGGGGGTCTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: ICGPWISIHFPTQHTPLGGPNNV*GWGSPQ Trigger: CTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCC...GCCGAGGGGCGTGTGCTGGGTCGGGAAGTGGATGCTTATCCAAGGGCCGCAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR GCA 72 bp | CTGCTCCTGCGCACAAAGGGCTGCACCAGTTTCAGGTaGACTGCAGTAGCCACGGGGATAGGCAGCACCGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLLRTKGCTSFR*TAVATGIGSTE Trigger: CTCGGTGCTGCCTATCCCCGTGGCTACTGCAGTGCACCTGAAACTGGTGCAGCCCTTTGTGCGCAGGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR GCA 72 bp | CCTGCGCACAAAGGGCTGCACCAGTTTCAGGTGCACTaGAGTAGCCACGGGGATAGGCAGCACCGAGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: PAHKGLHQFQVH*SSHGDRQHRVT Trigger: AGTGACTCGGTGCTGCCTATCCCCGTGGCTACTGCAGTGCACCTGAAACTGGTGCAGCCCTTTGTGCGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR CCA 72 bp | TCTGGACCACCCAGAGCACAGGGCAGAGAAGTGGGATaGCTCACGCCATCATTCCACCCCCAACCCCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SGPPRAQGREVG*LTPSFHPQPLQ Trigger: TTGCAGGGGTTGGGGGTGGAATGATGGCGTGAGCCATCCCACTTCTCTGCCCTGTGCTCTGGGTGGTCCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR CCA 72 bp | AGGAAACGGACACAAGGGAGCTACATCTGCGGCCCTTaGATAAGCATCCACTTCCCGACCCAGCACACGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RKRTQGSYICGP*ISIHFPTQHTP Trigger: GGGCGTGTGCTGGGTCGGGAAGTGGATGCTTATCCAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGACCACCCAGAGCACAGGGCAGAGAAGTGGGATGGCTCACGCCATCATTCCCCTCCTCCACCTGCCTaGTTCTTGCTGGCATTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LDHPEHRAEKWDGSRHHSPPPPA*FLLAFS Trigger: AGAGAATGCCAGCAAGAACAAGGCAGGTGGAGGAGG...GGAATGATGGCGTGAGCCATCCCACTTCTCTGCCCTGTGCTCTGGGTGGTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCCTGCGCACAAAGGGCTGCACCAGTTTCAGGTGCACTGCAGTAGCCACGGTCACTAGGTGCATCTaGCTTAGACATAGGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLLRTKGCTSFRCTAVATVTRCI*LRHRQG Trigger: GCCCTGCCTATGTCTAAGCAAGATGCACCTAGTGAC...CGTGGCTACTGCAGTGCACCTGAAACTGGTGCAGCCCTTTGTGCGCAGGAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR GCA 72 bp | TTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTaGGGCCCTTGGATAAGCATCCACTTCCCGACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLGRKRTQGSYI*GPWISIHFPTQ Trigger: CTGGGTCGGGAAGTGGATGCTTATCCAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR CCA 72 bp | TCCTTGCAAGGCCGGCCTGAGTTCTGTGGCTCCTCTTaGCAAGTTACTGCCCTCCGTGCCCACTTGTACTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLQGRPEFCGSS*QVTALRAHLYF Trigger: AAAGTACAAGTGGGCACGGAGGGCAGTAACTTGCCAAGAGGAGCCACAGAACTCAGGCCGGCCTTGCAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCCTTGTTCTTGCTGGCATTCTCTGGTCCAGCTGTCACATGCATGCAGGCACCTCCTCCACCTGCCTaGTTCTTGCTGGCATTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PALFLLAFSGPAVTCMQAPPPPA*FLLAFS Trigger: AGAGAATGCCAGCAAGAACAAGGCAGGTGGAGGAGG...TGCCTGCATGCATGTGACAGCTGGACCAGAGAATGCCAGCAAGAACAAGGCAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCCACCTGCCTTGTTCTTGCTGGCATTCTCTGGTCCAGCTGTCACATGCAGCGTTGACCTCAGAGTaGTGTGACAATCCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLHLPCSCWHSLVQLSHAALTSE*CDNPSS Trigger: GGAGGAGGGATTGTCACACAACTCTGAGGTCAACGC...TGCATGTGACAGCTGGACCAGAGAATGCCAGCAAGAACAAGGCAGGTGGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTGGAGGAACTTTGCTGTGACACCCTCATACTTCAGCAGGATCCCAGCAGCCCTGGCTCAGTCAGAGTaGGAAGGGGTACTGTCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VWRNFAVTPSYFSRIPAALAQSE*EGVLSE Trigger: CTCCGACAGTACCCCTTCCAACTCTGACTGAGCCAG...GGCTGCTGGGATCCTGCTGAAGTATGAGGGTGTCACAGCAAAGTTCCTCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR CCA 72 bp | CACAGGTGGATGGGCCCAGGACATTCAGGACTACTTTaGGCCCAACAATGTTTTGGGATGGGGGTCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: HRWMGPGHSGLL*AQQCFGMGVST Trigger: TGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGAATGTCCTGGGCCCATCCACCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR CCA 72 bp | CCTCTGCTGCCTGCTTCTCACATATCCACAGCACAATaGATAGCACCCCAGAAGGCATGCCAATGGGCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PLLPASHISTAQ*IAPQKACQWAF Trigger: GAACGCCCATTGGCATGCCTTCTGGGGTGCTATCCATTGTGCTGTGGATATGTGAGAAGCAGGCAGCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATTCAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGTCGGCCACCAGACGGTaGATGACTAGCCGACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: TFRTTLGPTMFWDGGLHRSATRR*MTSRHR Trigger: TCTGTGTCGGCTAGTCATCAACCGTCTGGTGGCCGA...CCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGAATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR TCA 72 bp | TATACATGGGTAGGGGGCCTGCCCTACTCAGCAGACTaGGAAACCAGGGCTGGGAGAATAGACACAGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: YTWVGGLPYSAD*ETRAGRIDTVQ Trigger: CTGAACTGTGTCTATTCTCCCAGCCCTGGTTTCTCAGTCTGCTGAGTAGGGCAGGCCCCCTACCCATGTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR CCA 72 bp | TGCGTCCCCGTAAGGGGCCTTGGCATGATCAACCTCTaGCTGATATTCTCCCAGAAACAGGCTCGCTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: CVPVRGLGMINL*LIFSQKQARYS Trigger: AGAATAGCGAGCCTGTTTCTGGGAGAATATCAGCCAGAGGTTGATCATGCCAAGGCCCCTTACGGGGACGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATTCAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGGAAGAGTGGGAGCCCTaGTGTTTCTGGCTCCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TFRTTLGPTMFWDGGLHREEWEP*CFWLLS Trigger: AGACAGGAGCCAGAAACACAAGGGCTCCCACTCTTC...CCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAACTTTGCTGTGACACCCTCATACTTCAGCAGGATCCCAGCAGCCTACATAATGGGCGTTCACCCCTaGTCTCTCATCTCCCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RNFAVTPSYFSRIPAAYIMGVHP*SLISQG Trigger: CCCTTGGGAGATGAGAGACAAGGGGTGAACGCCCAT...TATGTAGGCTGCTGGGATCCTGCTGAAGTATGAGGGTGTCACAGCAAAGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR GCA 72 bp | TTGACCTCAGAGTTGTGTGACAATCCCTCCTCCACCTaGCTTGTTCTTGCTGGCATTCTCTGGTCCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LTSELCDNPSST*LVLAGILWSSC Trigger: ACAGCTGGACCAGAGAATGCCAGCAAGAACAAGGCAGGTGGAGGAGGGATTGTCACACAACTCTGAGGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR CCA 72 bp | AGGACATTCAGGACTACTTTGGGCCCAACAATGTTTTaGGATGGGGGTCTCCACAGGGAAGAACCAGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: RTFRTTLGPTMF*DGGLHREEPDL Trigger: CAGGTCTGGTTCTTCCCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGAATGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGGCAACTTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCCTCCCAAACTGGTTCTaGTGTTCTAACACTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CRQLPRQETDTRELHLRPLPNWF*CSNTCF Trigger: AAAACAAGTGTTAGAACACAAGAACCAGTTTGGGAG...GGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAAGTTGCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR TCA 72 bp | CATATTGTACCTAGAGGCGTTGACCTCAGAGTTGTGTaGCAATCCCTCCTCCACCTGCCTTGTTCTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: HIVPRGVDLRVV*QSLLHLPCSCW Trigger: CCAGCAAGAACAAGGCAGGTGGAGGAGGGATTGTCACACAACTCTGAGGTCAACGCCTCTAGGTACAATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR GCA 72 bp | CACTTCAGTACACTTTTATCCACTGTACTTTCTCCTTaGAAGGCCGGCCTGAGTTCTGTGGCTCCTCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: HFSTLLSTVLSP*KAGLSSVAPLG Trigger: GCCAAGAGGAGCCACAGAACTCAGGCCGGCCTTGCAAGGAGAAAGTACAGTGGATAAAAGTGTACTGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTGGAGGAACTTTGCTGTGACACCCTCATACTTCAGCAGGATCCCAGCAGCCGGAGTCATTGAAGTTTaGGCTTTTCCAGATGTGACG | + |
|
Preference number: 3 (lower is better) Translates to: VWRNFAVTPSYFSRIPAAGVIEV*AFPDVT Trigger: CGTCACATCTGGAAAAGCCAAAACTTCAATGACTCC...GGCTGCTGGGATCCTGCTGAAGTATGAGGGTGTCACAGCAAAGTTCCTCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR GCA 72 bp | CTTGTTAGGTGTGTATGTATTTCTCCCTCTCTCACGTaGAGGCAACTTCCTAGGCAGGAAACGGACACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LVRCVCISPSLT*RQLPRQETDTR Trigger: CCTTGTGTCCGTTTCCTGCCTAGGAAGTTGCCTGCACGTGAGAGAGGGAGAAATACATACACACCTAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCTTGTAGATCCTCTGCTGCCTGCTTCTCACATATCCACAGCACAATGGATCTCCCAAACTGGTTCTaGTGTTCTAACACTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: WACRSSAACFSHIHSTMDLPNWF*CSNTCF Trigger: AAAACAAGTGTTAGAACACAAGAACCAGTTTGGGAG...ATCCATTGTGCTGTGGATATGTGAGAAGCAGGCAGCAGAGGATCTACAAGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR TCA 72 bp | AAGAGGTCAAACCACGCGAAACTCCAGACACCCCACTaGAGGCTTCATAAGTGGAAGGCATACTTTTATTAT | + |
|
Preference number: 3 (lower is better) Translates to: KRSNHAKLQTPH*RLHKWKAYFYY Trigger: ATAATAAAAGTATGCCTTCCACTTATGAAGCCTTCAGTGGGGTGTCTGGAGTTTCGCGTGGTTTGACCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| 3UTR TCA 72 bp | AACTTTCGACTTGGTCTGAGGACTAGGAACCCATTCTaGATTGTCTCTAAAACACGATGTAAAAGGCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NFRLGLRTRNPF*IVSKTRCKRLG Trigger: TCCTAGCCTTTTACATCGTGTTTTAGAGACAATTCAGAATGGGTTCCTAGTCCTCAGACCAAGTCGAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| CDS-3UTR GCA 90 bp | CACCCAGAGCACAGGGCAGAGAAGTGGGATGGCTCACGCCATCATTCCACCCCCGGCATCTTCTGTAGGTaGTGCCGGGCCTCGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPEHRAEKWDGSRHHSTPGIFCR*CRASLA Trigger: AGCCAGCGAGGCCCGGCAGCACCTACAGAAGATGCC...GGGGGTGGAATGATGGCGTGAGCCATCCCACTTCTCTGCCCTGTGCTCTGGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| CDS-3UTR GCA 90 bp | CACCCAGAGCACAGGGCAGAGAAGTGGGATGGCTCACGCCATCATTCCACCCCCGCTCCGGGTGTCAGCTaGACAGGAGGCCACATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HPEHRAEKWDGSRHHSTPAPGVS*TGGHIV Trigger: CACTATGTGGCCTCCTGTGCAGCTGACACCCGGAGC...GGGGGTGGAATGATGGCGTGAGCCATCCCACTTCTCTGCCCTGTGCTCTGGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| CDS-3UTR CCA 90 bp | CAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGGAAGAGGCAGCTCCAGGGACTaGGCCCACAGAGGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QDYFGPNNVLGWGSPQGRGSSRD*AHRGRR Trigger: GCGGCGGCCTCTGTGGGCCCAGTCCCTGGAGCTGCC...TCTTCCCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| CDS-3UTR GCA 90 bp | CACCCAGAGCACAGGGCAGAGAAGTGGGATGGCTCACGCCATCATTCCACCCCCATCTTCTGTAGGTGCTaGCGGGCCTCGCTGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HPEHRAEKWDGSRHHSTPIFCRC*RASLAV Trigger: TACAGCCAGCGAGGCCCGGCAGCACCTACAGAAGAT...GGGGGTGGAATGATGGCGTGAGCCATCCCACTTCTCTGCCCTGTGCTCTGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR CAA 72 bp | GGCAGGGGTAGGCAGTCCACGTCGGCCACCAGACGGTaGATGACTAGCCGACACAGATGTTGTAAGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGRQSTSATRR*MTSRHRCCKLR Trigger: CCGCAGCTTACAACATCTGTGTCGGCTAGTCATCAACCGTCTGGTGGCCGACGTGGACTGCCTACCCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAACTTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCTTGAGACATAGGCAGGGCTaGGGTGGGAGCAGGATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RQLPRQETDTRELHLRPLRHRQG*GGSRIR Trigger: CCGGATCCTGCTCCCACCCCAGCCCTGCCTATGTCT...CAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAAGTTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| 3UTR CAA 72 bp | CAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCTaGGATAAGCATCCACTTCCCGACCCAGCACACGCC | + |
|
Preference number: 4 (lower is better) Translates to: QETDTRELHLRP*DKHPLPDPAHA Trigger: GGCGTGTGCTGGGTCGGGAAGTGGATGCTTATCCAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAGTGGGATGGCTCACGCCATCATTCCACCCCCAACCCCTGCAAGGAGAATGGCCGCCGCCCAATTTaGTCCACAGCCAGCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EKWDGSRHHSTPNPCKENGRRPI*STASKG Trigger: TCCTTTGCTGGCTGTGGAGCAAATTGGGCGGCGGCC...ATTCTCCTTGCAGGGGTTGGGGGTGGAATGATGGCGTGAGCCATCCCACTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTTGTTCTTGCTGGCATTCTCTGGTCCAGCTGTCACATGCATGCAGGCAGGCATCTTCTGTAGGTaGTGCCGGGCCTCGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PALFLLAFSGPAVTCMQAGIFCR*CRASLA Trigger: AGCCAGCGAGGCCCGGCAGCACCTACAGAAGATGCC...TGCCTGCATGCATGTGACAGCTGGACCAGAGAATGCCAGCAAGAACAAGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGCCCTTGTGTTTCTGGCTCCTGTCTGTCTGGCCACCCAGCCTCCCAAAAGGGTAGCTGGGGTGGGTaGTGTCTCGAACTAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: GSPCVSGSCLSGHPASQKGSWGG*CLELGM Trigger: CATTCCTAGTTCGAGACAGCACCCACCCCAGCTACC...CTTTTGGGAGGCTGGGTGGCCAGACAGACAGGAGCCAGAAACACAAGGGCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAGTGGGATGGCTCACGCCATCATTCCACCCCCAACCCCTGCAAGGAGAATATCTTCTGTAGGTGCTaGCGGGCCTCGCTGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EKWDGSRHHSTPNPCKENIFCRC*RASLAV Trigger: TACAGCCAGCGAGGCCCGGCAGCACCTACAGAAGAT...ATTCTCCTTGCAGGGGTTGGGGGTGGAATGATGGCGTGAGCCATCCCACTTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGGCAACTTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCGGTAGCTGGGGTGGGTaGTGTCTCGAACTAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: CRQLPRQETDTRELHLRPGSWGG*CLELGM Trigger: CATTCCTAGTTCGAGACAGCACCCACCCCAGCTACC...GGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAAGTTGCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| CDS-3UTR CCA 90 bp | TGTGACAATCCCTCCTCCACCTGCCTTGTTCTTGCTGGCATTCTCTGGTCCAGCCTGGGAATGCCCCAGTaGGTAAGGGCTGCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CDNPSSTCLVLAGILWSSLGMPQ*VRAAWL Trigger: CAGCCATGCAGCCCTTACCCACTGGGGCATTCCCAG...GCTGGACCAGAGAATGCCAGCAAGAACAAGGCAGGTGGAGGAGGGATTGTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTTGTTCTTGCTGGCATTCTCTGGTCCAGCTGTCACATGCATGCAGGCAACTCGATCCGCACGTTaGTGGGGCCACGGGTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PALFLLAFSGPAVTCMQATRSAR*WGHGWF Trigger: AAACCACCCGTGGCCCCACCAACGTGCGGATCGAGT...TGCCTGCATGCATGTGACAGCTGGACCAGAGAATGCCAGCAAGAACAAGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCTCTATGAAGCCATGGTGCTGCCCTGTGAGGAGAAGAGTGGGAGCCCTGGTAGGAGAACGTCTTaGCTATGCACAGCAGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQLYEAMVLPCEEKSGSPGRRTS*LCTADP Trigger: GGGATCTGCTGTGCATAGCCAAGACGTTCTCCTACC...AGGGCTCCCACTCTTCTCCTCACAGGGCAGCACCATGGCTTCATAGAGCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| CDS-3UTR CCA 90 bp | AGGCAACTTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCTTGAAGGCTGACCACATCTaGGAAGGCCAGGATTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQLPRQETDTRELHLRPLKADHI*EGQDSR Trigger: CCTCGAATCCTGGCCTTCCCAGATGTGGTCAGCCTT...CAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAAGTTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGAGAAGTGGGATGGCTCACGCCATCATTCCACCCCCAACCCCTGCAAGTCACTAGGTGCATCTTaGTTAGACATAGGCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAEKWDGSRHHSTPNPCKSLGAS*LDIGRA Trigger: AGCCCTGCCTATGTCTAAGCAAGATGCACCTAGTGA...CTTGCAGGGGTTGGGGGTGGAATGATGGCGTGAGCCATCCCACTTCTCTGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| 3UTR CAA 72 bp | ACACAGGTGGATGGGCCCAGGACATTCAGGACTACTTaGGGCCCAACAATGTTTTGGGATGGGGGTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQVDGPRTFRTT*GPTMFWDGGLH Trigger: GTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGAATGTCCTGGGCCCATCCACCTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCTCTATGAAGCCATGGTGCTGCCCTGTGAGGAGAAGAGTGGGAGCCCTCACCGAGTCACTAGGTaGATCTTGCTTAGACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLYEAMVLPCEEKSGSPHRVTR*ILLRHR Trigger: CCTATGTCTAAGCAAGATGCACCTAGTGACTCGGTG...AGGGCTCCCACTCTTCTCCTCACAGGGCAGCACCATGGCTTCATAGAGCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
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| CDS-3UTR GCA 90 bp | CAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGGAAGACTGCGCACAAAGGGCTaGACCAGTTTCAGGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QDYFGPNNVLGWGSPQGRLRTKG*TSFRCT Trigger: AGTGCACCTGAAACTGGTGCAGCCCTTTGTGCGCAG...TCTTCCCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGGAAGGGTTCATTCTCTGCCTaGACAGGGGTCTCCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGLLWAQQCFGMGVSTGKGSFSA*TGVSSV Trigger: GACAGAGGAGACCCCTGTCCAGGCAGAGAATGAACC...CTTCCCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| 3UTR CAA 72 bp | CCTCAGAGTTGTGTGACAATCCCTCCTCCACCTGCCTaGTTCTTGCTGGCATTCTCTGGTCCAGCTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PQSCVTIPPPPA*FLLAFSGPAVT Trigger: TGTGACAGCTGGACCAGAGAATGCCAGCAAGAACAAGGCAGGTGGAGGAGGGATTGTCACACAACTCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| CDS-3UTR TCA 90 bp | CAGGACATTCAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCAACGGGTGGTTTTGACTaGCAGTGTGAACAGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QDIQDYFGPNNVLGWGSPTGGFD*QCEQVA Trigger: AGCTACCTGTTCACACTGTCAGTCAAAACCACCCGT...TGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGAATGTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| 3UTR CAA 72 bp | GCACTTCAGTACACTTTTATCCACTGTACTTTCTCCTaGCAAGGCCGGCCTGAGTTCTGTGGCTCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALQYTFIHCTFS*QGRPEFCGSSW Trigger: CCAAGAGGAGCCACAGAACTCAGGCCGGCCTTGCAAGGAGAAAGTACAGTGGATAAAAGTGTACTGAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTGTAGATCCTCTGCTGCCTGCTTCTCACATATCCACAGCACAATGGATACGGGTGGTTTTGACTaGCAGTGTGAACAGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WACRSSAACFSHIHSTMDTGGFD*QCEQVA Trigger: AGCTACCTGTTCACACTGTCAGTCAAAACCACCCGT...ATCCATTGTGCTGTGGATATGTGAGAAGCAGGCAGCAGAGGATCTACAAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR CAA 72 bp | AGAGCCATATTGTACCTAGAGGCGTTGACCTCAGAGTaGTGTGACAATCCCTCCTCCACCTGCCTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAILYLEALTSE*CDNPSSTCLVL Trigger: AAGAACAAGGCAGGTGGAGGAGGGATTGTCACACAACTCTGAGGTCAACGCCTCTAGGTACAATATGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR CAA 72 bp | CTCGCTCTGATACATGGCTCACCACAAAGAGCCATATaGTACCTAGAGGCGTTGACCTCAGAGTTGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LALIHGSPQRAI*YLEALTSELCD Trigger: GTCACACAACTCTGAGGTCAACGCCTCTAGGTACAATATGGCTCTTTGTGGTGAGCCATGTATCAGAGCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| 3UTR CAA 72 bp | CAGCCCTCTGGCAAAGCCTATGGAGTCATTGAAGTTTaGGCTTTTCCAGATGTGACGTGGATCGAGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: QPSGKAYGVIEV*AFPDVTWIETR Trigger: TCGTGTCTCGATCCACGTCACATCTGGAAAAGCCAAAACTTCAATGACTCCATAGGCTTTGCCAGAGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| 3UTR CAA 72 bp | CTGATGTTCAAGATCTCGACTAAGAGAAGAGTCCTCTaGACTCCAAACGGCCTGAGCCAGAATTTTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: LMFKISTKRRVL*TPNGLSQNFDT Trigger: AGTGTCAAAATTCTGGCTCAGGCCGTTTGGAGTCAAGAGGACTCTTCTCTTAGTCGAGATCTTGAACATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| CDS GCA 90 bp | CCGGGCAGCTCCAGGGACTGGGCCCACAGAGGCCGCCGCCCAATTTaGTCCACAGCCAGCAAAGGACAAGATCCCTGTACGCAAAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: PGSSRDWAHRGRRPI*STASKGQDPCTQRT Trigger: GGTCCTTTGCGTACAGGGATCTTGTCCTTTGCTGGCTGTGGAGCAAATTGGGCGGCGGCCTCTGTGGGCCCAGTCCCTGGAGCTGCCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000167072.2 |
||
| CDS-3UTR CAA 90 bp | GGAGAAGAGTGGGAGCCCTTGTGTTTCTGGCTCCTGTCTGTCTGGCCACCCAGCTACTCGATCCGCACGTaGGTGGGGCCACGGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GEEWEPLCFWLLSVWPPSYSIRT*VGPRVV Trigger: AACCACCCGTGGCCCCACCAACGTGCGGATCGAGTA...GCTGGGTGGCCAGACAGACAGGAGCCAGAAACACAAGGGCTCCCACTCTTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| CDS-3UTR CAA 90 bp | ATCTGCGGCCCTTGGATAAGCATCCACTTCCCGACCCAGCACACGCCCCTCGGCTCGGCCACCAGACGGTaGATGACTAGCCGACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ICGPWISIHFPTQHTPLGSATRR*MTSRHR Trigger: TCTGTGTCGGCTAGTCATCAACCGTCTGGTGGCCGA...GCCGAGGGGCGTGTGCTGGGTCGGGAAGTGGATGCTTATCCAAGGGCCGCAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| CDS-3UTR CAA 90 bp | AGGCAACTTCCTAGGCAGGAAACGGACACAAGGGAGCTACATCTGCGGCCCTTGAGGCCGCCGCCCAATTaGCTCCACAGCCAGCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RQLPRQETDTRELHLRPLRPPPN*LHSQQR Trigger: CCTTTGCTGGCTGTGGAGCAAATTGGGCGGCGGCCT...CAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGCCTAGGAAGTTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCACCGAGTCACTAGGTGCATCTTGCTTAGACATAGGCAGGGCTGGGGTTACTCGATCCGCACGTaGGTGGGGCCACGGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RQHRVTRCILLRHRQGWGYSIRT*VGPRVV Trigger: AACCACCCGTGGCCCCACCAACGTGCGGATCGAGTA...ACCCCAGCCCTGCCTATGTCTAAGCAAGATGCACCTAGTGACTCGGTGCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
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| CDS GCA 90 bp | CTGTCTCGAACTAGGAATGTACCCTCCGGCATCTTCTGTAGGTGCTaGCGGGCCTCGCTGGCTGTAATAGAACCCCAGTACCACCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSRTRNVPSGIFCRC*RASLAVIEPQYHPL Trigger: CAGGGGGTGGTACTGGGGTTCTATTACAGCCAGCGAGGCCCGGCAGCACCTACAGAAGATGCCGGAGGGTACATTCCTAGTTCGAGACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| CDS GCA 90 bp | GTGCTGTCTCGAACTAGGAATGTACCCTCCGGCATCTTCTGTAGGTaGTGCCGGGCCTCGCTGGCTGTAATAGAACCCCAGTACCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLSRTRNVPSGIFCR*CRASLAVIEPQYHP Trigger: GGGGTGGTACTGGGGTTCTATTACAGCCAGCGAGGCCCGGCAGCACCTACAGAAGATGCCGGAGGGTACATTCCTAGTTCGAGACAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| CDS GCA 90 bp | GTGCTGTCTCGAACTAGGAATGTACCCTCCGGCATCTTCTGTAGGTaGTGCCGGGCCTCGCTGGCTGTAATAGAACCCCAGTACCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLSRTRNVPSGIFCR*CRASLAVIEPQYHP Trigger: TGGGTGGTACTGGGGTTCTATTACAGCCAGCGAGGCCCGGCAGCACCTACAGAAGATGCCGGAGGGTACATTCCTAGTTCGAGACAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| CDS GCA 90 bp | CTGTCTCGAACTAGGAATGTACCCTCCGGCATCTTCTGTAGGTGCTaGCGGGCCTCGCTGGCTGTAATAGAACCCCAGTACCACCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSRTRNVPSGIFCRC*RASLAVIEPQYHPD Trigger: ATCTGGGTGGTACTGGGGTTCTATTACAGCCAGCGAGGCCCGGCAGCACCTACAGAAGATGCCGGAGGGTACATTCCTAGTTCGAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
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| CDS CCA 90 bp | CGAACTAGGAATGTACCCTCCGGCATCTTCGGTTCATTCTCTGCCTaGACAGGGGTCTCCTCTGTCACTTCCTCTGGGAATGCCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RTRNVPSGIFGSFSA*TGVSSVTSSGNAPV Trigger: CACTGGGGCATTCCCAGAGGAAGTGACAGAGGAGACCCCTGTCCAGGCAGAGAATGAACCGAAGATGCCGGAGGGTACATTCCTAGTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167072.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGCTCTATGAAGCCATGGTGCTGCCCTGTGAGGAGAAGAGTGGGAGCCCTGTCACTAGGTGCATCTaGCTTAGACATAGGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQLYEAMVLPCEEKSGSPVTRCI*LRHRQG Trigger: GCCCTGCCTATGTCTAAGCAAGATGCACCTAGTGAC...AGGGCTCCCACTCTTCTCCTCACAGGGCAGCACCATGGCTTCATAGAGCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| CDS GCA 90 bp | CCCAGTACCACCCAGATTCCCGAAGGTAGGAGAACGTCTTGGCTATaGACAGCAGATCCCCCTCAGGGTCTAGCACCTTCGGTTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSTTQIPEGRRTSWL*TADPPQGLAPSVHS Trigger: AGAATGAACCGAAGGTGCTAGACCCTGAGGGGGATCTGCTGTGCATAGCCAAGACGTTCTCCTACCTTCGGGAATCTGGGTGGTACTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
||
| CDS-3UTR CAA 90 bp | TCAGGACTACTTTGGGCCCAACAATGTTTTGGGATGGGGGTCTCCACAGGGAAGGGGCCACGGGTGGTTTaGACTGACAGTGTGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGLLWAQQCFGMGVSTGKGPRVV*TDSVNR Trigger: CCTGTTCACACTGTCAGTCAAAACCACCCGTGGCCC...CTTCCCTGTGGAGACCCCCATCCCAAAACATTGTTGGGCCCAAAGTAGTCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| CDS-3UTR CAA 90 bp | GTTACTGCCCTCCGTGCCCACTTGTACTTTGAATGGACCCTTCCTTTTGGGCTTGGGCCACGGGTGGTTTaGACTGACAGTGTGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VTALRAHLYFEWTLPFGLGPRVV*TDSVNR Trigger: CCTGTTCACACTGTCAGTCAAAACCACCCGTGGCCC...AAGCCCAAAAGGAAGGGTCCATTCAAAGTACAAGTGGGCACGGAGGGCAGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168260.2 |
||
| CDS GCA 72 bp | GTCACTTCCTCTGGGAATGCCCCAGTGGGTAAGGGCTaGATGGCTGGCCCGGGCAGCTCCAGGGACTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VTSSGNAPVGKG*MAGPGSSRDWA Trigger: GGCCCAGTCCCTGGAGCTGCCCGGGCCAGCCATGCAGCCCTTACCCACTGGGGCATTCCCAGAGGAAGTGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000167072.2 |
||
| CDS CAA 90 bp | CCCGGGCAGCTCCAGGGACTGGGCCCACAGAGGCCGCCGCCCAATTaGCTCCACAGCCAGCAAAGGACAAGATCCCTGTACGCAAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PGQLQGLGPQRPPPN*LHSQQRTRSLYAKD Trigger: GTCCTTTGCGTACAGGGATCTTGTCCTTTGCTGGCTGTGGAGCAAATTGGGCGGCGGCCTCTGTGGGCCCAGTCCCTGGAGCTGCCCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000167072.2 |
||
| CDS CAA 72 bp | AGCCGGAAGCTAGAATCGGCGTACTCGATCCGCACGTaGGTGGGGCCACGGGTGGTTTTGACTGACAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SRKLESAYSIRT*VGPRVVLTDSV Trigger: CACACTGTCAGTCAAAACCACCCGTGGCCCCACCAACGTGCGGATCGAGTACGCCGATTCTAGCTTCCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000167072.2 |
||
| CDS GCA 72 bp | CGAACTAGGAATGTACCCTCCGGCATCTTCTGTAGGTaGTGCCGGGCCTCGCTGGCTGTAATAGAACCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RTRNVPSGIFCR*CRASLAVIEPQ Trigger: CTGGGGTTCTATTACAGCCAGCGAGGCCCGGCAGCACCTACAGAAGATGCCGGAGGGTACATTCCTAGTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
||
| CDS GCA 72 bp | ACCCAGATTCCCGAAGGTAGGAGAACGTCTTGGCTATaGACAGCAGATCCCCCTCAGGGTCTAGCACCTTCG | + |
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Preference number: 6 (lower is better) Translates to: TQIPEGRRTSWL*TADPPQGLAPS Trigger: CGAAGGTGCTAGACCCTGAGGGGGATCTGCTGTGCATAGCCAAGACGTTCTCCTACCTTCGGGAATCTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
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| CDS GCA 72 bp | ACTAGGAATGTACCCTCCGGCATCTTCTGTAGGTGCTaGCGGGCCTCGCTGGCTGTAATAGAACCCCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: TRNVPSGIFCRC*RASLAVIEPQY Trigger: GTACTGGGGTTCTATTACAGCCAGCGAGGCCCGGCAGCACCTACAGAAGATGCCGGAGGGTACATTCCTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085102.6 ENSMUST00000168260.2 |
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| CDS CCA 72 bp | CCCTCAGGGTCTAGCACCTTCGGTTCATTCTCTGCCTaGACAGGGGTCTCCTCTGTCACTTCCTCTGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PSGSSTFGSFSA*TGVSSVTSSGN Trigger: ATTCCCAGAGGAAGTGACAGAGGAGACCCCTGTCCAGGCAGAGAATGAACCGAAGGTGCTAGACCCTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
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| CDS CCA 72 bp | AGTACCACCCAGATTCCCGAAGGTAGGAGAACGTCTTaGCTATGCACAGCAGATCCCCCTCAGGGTCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: STTQIPEGRRTS*LCTADPPQGLA Trigger: TGCTAGACCCTGAGGGGGATCTGCTGTGCATAGCCAAGACGTTCTCCTACCTTCGGGAATCTGGGTGGTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
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| CDS TCA 72 bp | GCTGACCACATCTGGGAAGGCCAGGATTCGAGGTCTTaGCAAGCAGTTAGAGTCCAGCCGGAAGCTAGAATC | + |
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Preference number: 6 (lower is better) Translates to: ADHIWEGQDSRS*QAVRVQPEARI Trigger: GATTCTAGCTTCCGGCTGGACTCTAACTGCTTGTCAAGACCTCGAATCCTGGCCTTCCCAGATGTGGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085102.6 |
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| CDS CCA 72 bp | AATGTACCCTCCGGCATCTTCGGTTCATTCTCTGCCTaGACAGGGGTCTCCTCTGTCACTTCCTCTGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: NVPSGIFGSFSA*TGVSSVTSSGN Trigger: ATTCCCAGAGGAAGTGACAGAGGAGACCCCTGTCCAGGCAGAGAATGAACCGAAGATGCCGGAGGGTACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167072.2 |
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