Pregenerated sensors for CISD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028165Ensembl transcript IDs: ENSMUST00000029815.8, ENSMUST00000120988.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAATTCTAGGCCATTTAGGGTGGGACATGAGACCCTGGTATGTGTaGGAAAGGGAGGAAGGAGGGAGAAGGAGAGGGGAGGGGCCCAAT | + |
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Preference number: 1 (lower is better) Translates to: PILGHLGWDMRPWYV*EREEGGRRRGEGPN Trigger: ATTGGGCCCCTCCCCTCTCCTTCTCCCTCCTTCCTCCCTTTCTCACACATACCAGGGTCTCATGTCCCACCCTAAATGGCCTAGAATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| 3UTR TCA 90 bp | TGGTTTATGCTATTGAAAAGATACAACTCAAGACGGAGCTCAGTGTaGAGGGCTCTTGCCAGGGTGTGGGAGGCCCTGGGTTCCATCCTC | + |
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Preference number: 1 (lower is better) Translates to: WFMLLKRYNSRRSSV*RALARVWEALGSIL Trigger: GAGGATGGAACCCAGGGCCTCCCACACCCTGGCAAGAGCCCTTCACACTGAGCTCCGTCTTGAGTTGTATCTTTTCAATAGCATAAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR GCA 90 bp | CCAACACTCAGGGGAAGAGCCCTAAGTTTCTCCGAGTTCCAGCGTTaGCTGGTAAATACCACCAATTCTAGGCCATTTAGGGTGGGACAT | + |
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Preference number: 1 (lower is better) Translates to: PTLRGRALSFSEFQR*LVNTTNSRPFRVGH Trigger: ATGTCCCACCCTAAATGGCCTAGAATTGGTGGTATTTACCAGGCAACGCTGGAACTCGGAGAAACTTAGGGCTCTTCCCCTGAGTGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| 3UTR TCA 90 bp | GAAGAAATCCTAGAGATGGTCCATCTACTCCAGCAGGCAGACAGGTaGGTGTCCCCAGATTTAACTGTCTTGCTTTTACCCTGCTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: EEILEMVHLLQQADR*VSPDLTVLLLPCFW Trigger: CCAGAAGCAGGGTAAAAGCAAGACAGTTAAATCTGGGGACACTCACCTGTCTGCCTGCTGGAGTAGATGGACCATCTCTAGGATTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR TCA 90 bp | AGTATGGAGAAATTCCTAATCTCACAGAATTTCAAAACCGAGGACTaGAGGAGCATCGTAACCGCACAGTCTTACCCTATGTCTTACCGT | + |
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Preference number: 1 (lower is better) Translates to: SMEKFLISQNFKTED*RSIVTAQSYPMSYR Trigger: ACGGTAAGACATAGGGTAAGACTGTGCGGTTACGATGCTCCTTCAGTCCTCGGTTTTGAAATTCTGTGAGATTAGGAATTTCTCCATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| 3UTR TCA 90 bp | TCAATCAGGTCTTATCACTCGGGCCTAAAGAGCTTAACTGTGCTATaGCGATTCTATTCAAAGCCTCAATTAAGAAAAGATCAATTAAAA | + |
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Preference number: 1 (lower is better) Translates to: SIRSYHSGLKSLTVL*RFYSKPQLRKDQLK Trigger: TTTTAATTGATCTTTTCTTAATTGAGGCTTTGAATAGAATCGTCATAGCACAGTTAAGCTCTTTAGGCCCGAGTGATAAGACCTGATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAGAGATGGTCCATCTACTCCAGCAGGCAGACAGGTGAGTGTCCCCAGATTTGCTGTAACACGTGTGTaGCTTCCTCTCCTCGAACAG | + |
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Preference number: 2 (lower is better) Translates to: PRDGPSTPAGRQVSVPRFAVTRV*LPLLEQ Trigger: CTGTTCGAGGAGAGGAAGCCACACACGTGTTACAGC...AAATCTGGGGACACTCACCTGTCTGCCTGCTGGAGTAGATGGACCATCTCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAGAGATGGTCCATCTACTCCAGCAGGCAGACAGGTGAGTGTCCCCAGATTTAGCCTACCTTGCCCTTaGCGTGTCATTTCACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: PRDGPSTPAGRQVSVPRFSLPCP*RVISLR Trigger: CCTAAGTGAAATGACACGTCAAGGGCAAGGTAGGCT...AAATCTGGGGACACTCACCTGTCTGCCTGCTGGAGTAGATGGACCATCTCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCGTGCAAGTGGACCATGCTGTGTCATAGTCATAGTCCTTGGTCCTTCCAGAGTTCATGAGTGCTCTTaGCACCCAGCAGTCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: IRASGPCCVIVIVLGPSRVHECS*HPAVSK Trigger: CTTGGAGACTGCTGGGTGGCAAGAGCACTCATGAAC...TCTGGAAGGACCAAGGACTATGACTATGACACAGCATGGTCCACTTGCACGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTCAGTTGTTAATAGCACTGGATGTTCTTGTAGGAGACCAGGTTCAGTTCCCCAGCAGGCAGACAGGTaGGTGTCCCCAGATTTAACT | + |
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Preference number: 2 (lower is better) Translates to: GSVVNSTGCSCRRPGSVPQQADR*VSPDLT Trigger: AGTTAAATCTGGGGACACTCACCTGTCTGCCTGCTG...GGGAACTGAACCTGGTCTCCTACAAGAACATCCAGTGCTATTAACAACTGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTGTACCACTTCTGCCTTTCGGAATACTTCCTTCCACATTTCAGTTGCTACACCAGGCATGTGCATaGTGCACAGACAGACACACA | + |
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Preference number: 2 (lower is better) Translates to: GFVPLLPFGILPSTFQLLHQACA*CTDRHT Trigger: TGTGTGTCTGTCTGTGCACCATGCACATGCCTGGTG...TAGCAACTGAAATGTGGAAGGAAGTATTCCGAAAGGCAGAAGTGGTACAAAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAGAGATGGTCCATCTACTCCAGCAGGCAGACAGGTGAGTGTCCCCAGATTTATGCCCACAAGTGTTTaGTCTATATTTTGTGACGTT | + |
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Preference number: 2 (lower is better) Translates to: PRDGPSTPAGRQVSVPRFMPTSV*SIFCDV Trigger: AACGTCACAAAATATAGATCAAACACTTGTGGGCAT...AAATCTGGGGACACTCACCTGTCTGCCTGCTGGAGTAGATGGACCATCTCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCGTTGCCTGGTAAATACCACCAATTCTAGGCCATTTAGGGTGGGACATGAGTGGGACTATCGGCTCTaGATATTAAACAGTATGGAG | + |
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Preference number: 2 (lower is better) Translates to: QRCLVNTTNSRPFRVGHEWDYRL*ILNSME Trigger: CTCCATACTGTTTAATATTCAGAGCCGATAGTCCCA...CTCATGTCCCACCCTAAATGGCCTAGAATTGGTGGTATTTACCAGGCAACGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTTTCGGAATACTTCCTTCCACATTTCAGTTGCTACTTCAAACCAATCATTGTGATGATGCTTCCTaGCCTGCTGGCTCCACCCTA | + |
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Preference number: 2 (lower is better) Translates to: LPFGILPSTFQLLLQTNHCDDAS*PAGSTL Trigger: TAGGGTGGAGCCAGCAGGGCAGGAAGCATCATCACA...ATGATTGGTTTGAAGTAGCAACTGAAATGTGGAAGGAAGTATTCCGAAAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR GCA 90 bp | TTCGGAATACTTCCTTCCACATTTCAGTTGCTACTTCAAACCAATCATAACCTCCGGGCACCAGGCATGTaGATGGTGCACAGACAGACA | + |
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Preference number: 2 (lower is better) Translates to: FGILPSTFQLLLQTNHNLRAPGM*MVHRQT Trigger: TGTCTGTCTGTGCACCATGCACATGCCTGGTGCCCG...GAGGTTATGATTGGTTTGAAGTAGCAACTGAAATGTGGAAGGAAGTATTCCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTGTACCACTTCTGCCTTTCGGAATACTTCCTTCCACATTTCAGTTGCTACCTTATCCGTGCAAGTaGACCATGCTGTGTCATAGT | + |
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Preference number: 2 (lower is better) Translates to: GFVPLLPFGILPSTFQLLPYPCK*TMLCHS Trigger: ACTATGACACAGCATGGTCCACTTGCACGGATAAGG...TAGCAACTGAAATGTGGAAGGAAGTATTCCGAAAGGCAGAAGTGGTACAAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTCAGTTGTTAATAGCACTGGATGTTCTTGTAGGAGACCAGGTTCAGTTCCCCAAACAGAATTCATGTaGTACCAGGCATACTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GSVVNSTGCSCRRPGSVPQTEFM*YQAYCV Trigger: CACACAGTATGCCTGGTACCACATGAATTCTGTTTG...GGGAACTGAACCTGGTCTCCTACAAGAACATCCAGTGCTATTAACAACTGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCGTGCAAGTGGACCATGCTGTGTCATAGTCATAGTCCTTGGTCCTTCCAGACCAAAGACTTTTCTATaGACAACACACATGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: IRASGPCCVIVIVLGPSRPKTFL*TTHMET Trigger: TGTTTCCATGTGTGTTGTGCATAGAAAAGTCTTTGG...TCTGGAAGGACCAAGGACTATGACTATGACACAGCATGGTCCACTTGCACGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAACAAACAGAATTCATGTGGTACCAGGCATACTGTGTGCTCATTTAATATGCTTCCTGCCCTGCTaGCTCCACCCTATCCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: KRTNRIHVVPGILCAHLICFLPC*LHPILR Trigger: TCTAAGGATAGGGTGGAGCCAGCAGGGCAGGAAGCA...TATTAAATGAGCACACAGTATGCCTGGTACCACATGAATTCTGTTTGTTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAACAAACAGAATTCATGTGGTACCAGGCATACTGTGTGCTCATTTAATATCAAACTCTAGTTCATaGGTGCTCTTGCCACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: KRTNRIHVVPGILCAHLISNSSS*VLLPPS Trigger: GCTGGGTGGCAAGAGCACTCATGAACTAGAGTTTGA...TATTAAATGAGCACACAGTATGCCTGGTACCACATGAATTCTGTTTGTTCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAACAAACAGAATTCATGTGGTACCAGGCATACTGTGTGCTCATTTAATACTTAGGAGCCAGACGTaGAAGGACTGTTGGTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: KRTNRIHVVPGILCAHLILRSQT*KDCWCF Trigger: AAAACACCAACAGTCCTTTCACGTCTGGCTCCTAAG...TATTAAATGAGCACACAGTATGCCTGGTACCACATGAATTCTGTTTGTTCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR GCA 72 bp | ATACAACTCAAGACGGAGCTCAGTGTGAAGGGCTCTTaGCAGGGTGTGGGAGGCCCTGGGTTCCATCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: IQLKTELSVKGS*QGVGGPGFHPQ Trigger: CTGAGGATGGAACCCAGGGCCTCCCACACCCTGGCAAGAGCCCTTCACACTGAGCTCCGTCTTGAGTTGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR CCA 72 bp | GTGGGAGGCCCTGGGTTCCATCCTCAGTACCATGAGTaGAGTGAGCAGACACGGCTTTGTACCACTTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: VGGPGFHPQYHE*SEQTRLCTTSA Trigger: GGCAGAAGTGGTACAAAGCCGTGTCTGCTCACTCCACTCATGGTACTGAGGATGGAACCCAGGGCCTCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR TCA 72 bp | GGCCATTTAGGGTGGGACATGAGACCCTGGTATGTGTaGGAAAGGGAGGAAGGAGGGAGAAGGAGAGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: GHLGWDMRPWYV*EREEGGRRRGE Trigger: CTCCCCTCTCCTTCTCCCTCCTTCCTCCCTTTCTCACACATACCAGGGTCTCATGTCCCACCCTAAATGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| 3UTR TCA 72 bp | CTATTGAAAAGATACAACTCAAGACGGAGCTCAGTGTaGAGGGCTCTTGCCAGGGTGTGGGAGGCCCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: LLKRYNSRRSSV*RALARVWEALG Trigger: ACCCAGGGCCTCCCACACCCTGGCAAGAGCCCTTCACACTGAGCTCCGTCTTGAGTTGTATCTTTTCAATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR TCA 72 bp | CTAGAGATGGTCCATCTACTCCAGCAGGCAGACAGGTaGGTGTCCCCAGATTTAACTGTCTTGCTTTTACCC | + |
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Preference number: 3 (lower is better) Translates to: LEMVHLLQQADR*VSPDLTVLLLP Trigger: GGGTAAAAGCAAGACAGTTAAATCTGGGGACACTCACCTGTCTGCCTGCTGGAGTAGATGGACCATCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR GCA 72 bp | AGGGGAAGAGCCCTAAGTTTCTCCGAGTTCCAGCGTTaGCTGGTAAATACCACCAATTCTAGGCCATTTAGG | + |
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Preference number: 3 (lower is better) Translates to: RGRALSFSEFQR*LVNTTNSRPFR Trigger: CCTAAATGGCCTAGAATTGGTGGTATTTACCAGGCAACGCTGGAACTCGGAGAAACTTAGGGCTCTTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| 3UTR TCA 72 bp | AAATTCCTAATCTCACAGAATTTCAAAACCGAGGACTaGAGGAGCATCGTAACCGCACAGTCTTACCCTATG | + |
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Preference number: 3 (lower is better) Translates to: KFLISQNFKTED*RSIVTAQSYPM Trigger: CATAGGGTAAGACTGTGCGGTTACGATGCTCCTTCAGTCCTCGGTTTTGAAATTCTGTGAGATTAGGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| 3UTR TCA 72 bp | TCTTATCACTCGGGCCTAAAGAGCTTAACTGTGCTATaGCGATTCTATTCAAAGCCTCAATTAAGAAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: SYHSGLKSLTVL*RFYSKPQLRKD Trigger: ATCTTTTCTTAATTGAGGCTTTGAATAGAATCGTCATAGCACAGTTAAGCTCTTTAGGCCCGAGTGATAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR GCA 72 bp | AACAAACAGAATTCATGTGGTACCAGGCATACTGTGTaGTCATTTAATAAAGAAGAAATCCTAGAGATGGTC | + |
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Preference number: 3 (lower is better) Translates to: NKQNSCGTRHTV*SFNKEEILEMV Trigger: GACCATCTCTAGGATTTCTTCTTTATTAAATGAGCACACAGTATGCCTGGTACCACATGAATTCTGTTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR GCA 72 bp | TTCTGCCTTTCGGAATACTTCCTTCCACATTTCAGTTaGTACTTCAAACCAATCATAACCTCTTTTATTAAA | + |
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Preference number: 3 (lower is better) Translates to: FCLSEYFLPHFS*YFKPIITSFIK Trigger: TTTAATAAAAGAGGTTATGATTGGTTTGAAGTAGCAACTGAAATGTGGAAGGAAGTATTCCGAAAGGCAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| 3UTR CAA 72 bp | GATACAACTCAAGACGGAGCTCAGTGTGAAGGGCTCTaGCCAGGGTGTGGGAGGCCCTGGGTTCCATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: DTTQDGAQCEGL*PGCGRPWVPSS Trigger: TGAGGATGGAACCCAGGGCCTCCCACACCCTGGCAAGAGCCCTTCACACTGAGCTCCGTCTTGAGTTGTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| CDS-3UTR TCA 90 bp | ATTCCTAATCTCACAGAATTTCAAAACCGAGGACTGAAGGAGCATCGTAACCGCGGCGGGCGAACCCGGTaGTGCTGTCGGGGACCGGGA | + |
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Preference number: 4 (lower is better) Translates to: IPNLTEFQNRGLKEHRNRGGRTR*CCRGPG Trigger: TCCCGGTCCCCGACAGCATCACCGGGTTCGCCCGCC...GCGGTTACGATGCTCCTTCAGTCCTCGGTTTTGAAATTCTGTGAGATTAGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| CDS-3UTR TCA 90 bp | TTCGGAATACTTCCTTCCACATTTCAGTTGCTACTTCAAACCAATCATAACCTCGGCGGGCGAACCCGGTaGTGCTGTCGGGGACCGGGA | + |
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Preference number: 4 (lower is better) Translates to: FGILPSTFQLLLQTNHNLGGRTR*CCRGPG Trigger: TCCCGGTCCCCGACAGCATCACCGGGTTCGCCCGCC...GAGGTTATGATTGGTTTGAAGTAGCAACTGAAATGTGGAAGGAAGTATTCCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| CDS-3UTR GCA 90 bp | GTAAATACCACCAATTCTAGGCCATTTAGGGTGGGACATGAGACCCTGGTATGTGCTGCACCTTCACGATaGGGGCCACGCTGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VNTTNSRPFRVGHETLVCAAPSR*GPRCPG Trigger: TCCTGGACAGCGTGGCCCGCATCGTGAAGGTGCAGC...ACATACCAGGGTCTCATGTCCCACCCTAAATGGCCTAGAATTGGTGGTATTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| CDS-3UTR GCA 90 bp | GCTTTGTACCACTTCTGCCTTTCGGAATACTTCCTTCCACATTTCAGTTGCTACGCTGCACCTTCACGATaGGGGCCACGCTGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ALYHFCLSEYFLPHFSCYAAPSR*GPRCPG Trigger: TCCTGGACAGCGTGGCCCGCATCGTGAAGGTGCAGC...GTAGCAACTGAAATGTGGAAGGAAGTATTCCGAAAGGCAGAAGTGGTACAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| CDS-3UTR GCA 90 bp | TCTACTCCAGCAGGCAGACAGGTGAGTGTCCCCAGATTTAACTGTCTTGCTTTTGCACCTACAATAAGCTaGTTTGGTGAGACACAGATC | + |
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Preference number: 4 (lower is better) Translates to: STPAGRQVSVPRFNCLAFAPTIS*FGETQI Trigger: GATCTGTGTCTCACCAAAGCAGCTTATTGTAGGTGC...AAAAGCAAGACAGTTAAATCTGGGGACACTCACCTGTCTGCCTGCTGGAGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| CDS-3UTR CCA 90 bp | ATTCCTAATCTCACAGAATTTCAAAACCGAGGACTGAAGGAGCATCGTAACCGCCTGTTGCTTCTTCTTTaGGAAGAATGGGCGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: IPNLTEFQNRGLKEHRNRLLLLL*EEWAHC Trigger: GCAGTGCGCCCATTCTTCCCAAAGAAGAAGCAACAG...GCGGTTACGATGCTCCTTCAGTCCTCGGTTTTGAAATTCTGTGAGATTAGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| CDS-3UTR CCA 90 bp | AAAACTTCCAAAGACTTTTCTATGCACAACACACATGGAAACACTCTGTCAGAGCTGTTGCTTCTTCTTTaGGAAGAATGGGCGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: KTSKDFSMHNTHGNTLSELLLLL*EEWAHC Trigger: GCAGTGCGCCCATTCTTCCCAAAGAAGAAGCAACAG...CTCTGACAGAGTGTTTCCATGTGTGTTGTGCATAGAAAAGTCTTTGGAAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| CDS-3UTR GCA 90 bp | GGCTTTGTACCACTTCTGCCTTTCGGAATACTTCCTTCCACATTTCAGTTGCTAAAGCTATCCTTCTGTTaGTTCTTCTTTGGGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: GFVPLLPFGILPSTFQLLKLSFC*FFFGKN Trigger: ATTCTTCCCAAAGAAGAAGCAACAGAAGGATAGCTT...TAGCAACTGAAATGTGGAAGGAAGTATTCCGAAAGGCAGAAGTGGTACAAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| CDS-3UTR GCA 90 bp | ATTCCTAATCTCACAGAATTTCAAAACCGAGGACTGAAGGAGCATCGTAACCGCAAGCTATCCTTCTGTTaGTTCTTCTTTGGGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: IPNLTEFQNRGLKEHRNRKLSFC*FFFGKN Trigger: ATTCTTCCCAAAGAAGAAGCAACAGAAGGATAGCTT...GCGGTTACGATGCTCCTTCAGTCCTCGGTTTTGAAATTCTGTGAGATTAGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| CDS CCA 90 bp | AAGATTGATCAAGCTATCCTTCTGTTGCTTCTTCTTTGGGAAGAATaGGCGCACTGCGAGGTAGCCCAGAAGCGCAAGTACCCCGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: KIDQAILLLLLLWEE*AHCEVAQKRKYPEE Trigger: TTCCTCGGGGTACTTGCGCTTCTGGGCTACCTCGCAGTGCGCCCATTCTTCCCAAAGAAGAAGCAACAGAAGGATAGCTTGATCAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029815.8 ENSMUST00000120988.2 |
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| CDS CCA 90 bp | TTGTATCTTAAGATTGATCAAGCTATCCTTCTGTTGCTTCTTCTTTaGGAAGAATGGGCGCACTGCGAGGTAGCCCAGAAGCGCAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: LYLKIDQAILLLLLL*EEWAHCEVAQKRKY Trigger: GTACTTGCGCTTCTGGGCTACCTCGCAGTGCGCCCATTCTTCCCAAAGAAGAAGCAACAGAAGGATAGCTTGATCAATCTTAAGATACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029815.8 ENSMUST00000120988.2 |
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| CDS-3UTR CAA 90 bp | ATTCCTAATCTCACAGAATTTCAAAACCGAGGACTGAAGGAGCATCGTAACCGCTCTGTTGCTTCTTCTTaGGGAAGAATGGGCGCACTG | + |
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Preference number: 5 (lower is better) Translates to: IPNLTEFQNRGLKEHRNRSVASS*GRMGAL Trigger: CAGTGCGCCCATTCTTCCCAAAGAAGAAGCAACAGA...GCGGTTACGATGCTCCTTCAGTCCTCGGTTTTGAAATTCTGTGAGATTAGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| CDS-3UTR CAA 90 bp | ATCCGTGCAAGTGGACCATGCTGTGTCATAGTCATAGTCCTTGGTCCTTCCAGACAAGCTATCCTTCTGTaGCTTCTTCTTTGGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: IRASGPCCVIVIVLGPSRQAILL*LLLWEE Trigger: TTCTTCCCAAAGAAGAAGCAACAGAAGGATAGCTTG...TCTGGAAGGACCAAGGACTATGACTATGACACAGCATGGTCCACTTGCACGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| CDS-3UTR CAA 90 bp | CTGCCTTTCGGAATACTTCCTTCCACATTTCAGTTGCTACTTCAAACCAATCATTCTGTTGCTTCTTCTTaGGGAAGAATGGGCGCACTG | + |
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Preference number: 5 (lower is better) Translates to: LPFGILPSTFQLLLQTNHSVASS*GRMGAL Trigger: CAGTGCGCCCATTCTTCCCAAAGAAGAAGCAACAGA...ATGATTGGTTTGAAGTAGCAACTGAAATGTGGAAGGAAGTATTCCGAAAGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029815.8 |
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| CDS-3UTR CAA 90 bp | ATTCCTAATCTCACAGAATTTCAAAACCGAGGACTGAAGGAGCATCGTAACCGCCAAGCTATCCTTCTGTaGCTTCTTCTTTGGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: IPNLTEFQNRGLKEHRNRQAILL*LLLWEE Trigger: TTCTTCCCAAAGAAGAAGCAACAGAAGGATAGCTTG...GCGGTTACGATGCTCCTTCAGTCCTCGGTTTTGAAATTCTGTGAGATTAGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120988.2 |
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| CDS GCA 72 bp | CTTCTGTTGCTTCTTCTTTGGGAAGAATGGGCGCACTaGGAGGTAGCCCAGAAGCGCAAGTACCCCGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LLLLLLWEEWAH*EVAQKRKYPEE Trigger: TTCCTCGGGGTACTTGCGCTTCTGGGCTACCTCGCAGTGCGCCCATTCTTCCCAAAGAAGAAGCAACAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029815.8 ENSMUST00000120988.2 |
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| CDS CCA 72 bp | CAAGCTATCCTTCTGTTGCTTCTTCTTTGGGAAGAATaGGCGCACTGCGAGGTAGCCCAGAAGCGCAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: QAILLLLLLWEE*AHCEVAQKRKY Trigger: GTACTTGCGCTTCTGGGCTACCTCGCAGTGCGCCCATTCTTCCCAAAGAAGAAGCAACAGAAGGATAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029815.8 ENSMUST00000120988.2 |
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| CDS CAA 90 bp | GGGATTTTCCTTTTGTATCTTAAGATTGATCAAGCTATCCTTCTGTaGCTTCTTCTTTGGGAAGAATGGGCGCACTGCGAGGTAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GIFLLYLKIDQAILL*LLLWEEWAHCEVAQ Trigger: CTGGGCTACCTCGCAGTGCGCCCATTCTTCCCAAAGAAGAAGCAACAGAAGGATAGCTTGATCAATCTTAAGATACAAAAGGAAAATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029815.8 ENSMUST00000120988.2 |
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| CDS GCA 72 bp | TTTTGTATCTTAAGATTGATCAAGCTATCCTTCTGTTaGTTCTTCTTTGGGAAGAATGGGCGCACTGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: FCILRLIKLSFC*FFFGKNGRTAR Trigger: CCTCGCAGTGCGCCCATTCTTCCCAAAGAAGAAGCAACAGAAGGATAGCTTGATCAATCTTAAGATACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029815.8 ENSMUST00000120988.2 |
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| CDS CAA 72 bp | CTTTTGTATCTTAAGATTGATCAAGCTATCCTTCTGTaGCTTCTTCTTTGGGAAGAATGGGCGCACTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: LLYLKIDQAILL*LLLWEEWAHCE Trigger: CTCGCAGTGCGCCCATTCTTCCCAAAGAAGAAGCAACAGAAGGATAGCTTGATCAATCTTAAGATACAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029815.8 ENSMUST00000120988.2 |
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