Pregenerated sensors for CIP2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033031Ensembl transcript IDs: ENSMUST00000048374.6, ENSMUST00000117994.8
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATATTTATACTGATATAGTAGAAACCACTTGTAATCCTAGTGCCTaGATTACAAGAGGAGATCACTGGGAGTTAAGACACATGAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: YIYTDIVETTCNPSA*ITRGDHWELRHMRS Trigger: GGACCTCATGTGTCTTAACTCCCAGTGATCTCCTCTTGTAATCCAGGCACTAGGATTACAAGTGGTTTCTACTATATCAGTATAAATATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCATAGTTGCAAAAGATaGTACAGCCTAAAGACCCTG | + |
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Preference number: 2 (lower is better) Translates to: RRSLGVKTHEVHSKLKISHSCKR*YSLKTL Trigger: CAGGGTCTTTAGGCTGTATCATCTTTTGCAACTATG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCAACAAAAGTATTCATaGACAAATTCCCCAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RRSLGVKTHEVHSKLKISQQKYS*TNSPKP Trigger: TGGCTTTGGGGAATTTGTGCATGAATACTTTTGTTG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| 3UTR CCA 72 bp | ACTGATATAGTAGAAACCACTTGTAATCCTAGTGCCTaGATTACAAGAGGAGATCACTGGGAGTTAAGACAC | + |
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Preference number: 3 (lower is better) Translates to: TDIVETTCNPSA*ITRGDHWELRH Trigger: GTGTCTTAACTCCCAGTGATCTCCTCTTGTAATCCAGGCACTAGGATTACAAGTGGTTTCTACTATATCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| 3UTR GCA 72 bp | GATAACTGTTTTGAAGTCACGATTTCCTCCGTTTACTaGCACTTCCAACATATAAATACAACAAAAGTATTC | + |
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Preference number: 3 (lower is better) Translates to: DNCFEVTISSVY*HFQHINTTKVF Trigger: GAATACTTTTGTTGTATTTATATGTTGGAAGTGGCAGTAAACGGAGGAAATCGTGACTTCAAAACAGTTATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAAGTGCCTCAGCAGCTaGGTGGCGTTCGCCTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISKCLSS*VAFASD Trigger: GTCGGAGGCGAACGCCACTCAGCTGCTGAGGCACTT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAGTACATGGCGCAGCTaGGTCACTGCACAGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISSTWRS*VTAQKA Trigger: TGCCTTCTGTGCAGTGACTCAGCTGCGCCATGTACT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCAGTCTGTCAGCCTGTaGAAGAGCCAGGGCTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISQSVSL*KSQGFC Trigger: GCAAAAGCCCTGGCTCTTGCACAGGCTGACAGACTG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTCGTGCCTCTGTCTCTaGTTGCGTTCTCTGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISSCLCL*LRSLTA Trigger: CGCTGTCAGAGAACGCAAGCAGAGACAGAGGCACGA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCACCCGCAAGTGTTCGTaGCTCTGTCTCTGCTTGCGT | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISTRKCS*LCLCLR Trigger: ACGCAAGCAGAGACAGAGGCACGAACACTTGCGGGT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCAAACATCATCTGACTaGGTACATGGCGCAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISQTSSD*VHGAAE Trigger: CTCAGCTGCGCCATGTACTCAGTCAGATGATGTTTG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR CCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCGCTCCATCCAAGGGTTaGCTTAACCAGCGAAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISAPSKG*LNQRSR Trigger: TCTACTTCGCTGGTTAAGCCAACCCTTGGATGGAGC...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCCGACAAACCACTCCTaGCAGCACACTATTCAGATT | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISPTNHS*QHTIQI Trigger: AATCTGAATAGTGTGCTGTCAGGAGTGGTTTGTCGG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTGTTCAAACATCATCTaGCTGAGTACATGGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISCSNII*LSTWRS Trigger: GCTGCGCCATGTACTCAGTCAGATGATGTTTGAACA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCCTGCAGTTTCTCTATaGGGTCCTCAATGTTCAACG | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISPAVSL*GPQCST Trigger: CGTTGAACATTGAGGACCTCATAGAGAAACTGCAGG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCAACCACAGTCAGACTaGTGTGTGCTAGGAAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISQPQSD*CVLGSL Trigger: TAAGCTTCCTAGCACACAGCAGTCTGACTGTGGTTG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCGGCTTCCCAGAATGTTaGCAGATGGAGACTGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISGFPEC*QMETVQ Trigger: TTGAACAGTCTCCATCTGGCAACATTCTGGGAAGCC...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR CCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTCTCGGTCTGCTAACTaGCTCTGGACTTCTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISSRSAN*LWTSFL Trigger: GAGAAAAGAAGTCCAGAGCCAGTTAGCAGACCGAGA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCCATATGTAAACTGCTaGTCTATAAGCGTGGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISPYVNC*SISVVH Trigger: GTGCACCACGCTTATAGAGCAGCAGTTTACATATGG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCATCAGCAGCAAGTTTaGACAACTCAGAATCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISHQQQV*TTQNRL Trigger: TAGCCGATTCTGAGTTGTGCAAACTTGCTGCTGATG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCATTTTCCTGGGCAGATaGTCAGTTTCTTGCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISIFLGR*SVSCCL Trigger: CAGACAGCAAGAAACTGAGCATCTGCCCAGGAAAAT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCCTCGAAGATTTCCTTaGACAACTCCAATGCTAACA | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISPRRFP*TTPMLT Trigger: TGTTAGCATTGGAGTTGTTCAAGGAAATCTTCGAGG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAAACGACCTTCTAATTaGGCCTTGTGCATTTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISKRPSN*ALCISR Trigger: CCTAGAAATGCACAAGGCTCAATTAGAAGGTCGTTT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTTGCCATATGTAAACTaGTGCTCTATAAGCGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISLPYVN*CSISVV Trigger: CACCACGCTTATAGAGCAGCAGTTTACATATGGCAA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR CCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCGGAAAGTCATTTTCCTaGGCAGATGCTCAGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISGKSFS*ADAQFL Trigger: AAGAAACTGAGCATCTGCCCAGGAAAATGACTTTCC...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR CCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTGCTCAATATCATTTTaGGCTCTTTCTGACTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISCSISF*ALSDSS Trigger: GCTCGAGTCAGAAAGAGCCCAAAATGATATTGAGCA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCGATGTTGAAAAACCATaGTTTAAGGGCTGGAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISDVEKP*FKGWKV Trigger: GACTTTCCAGCCCTTAAATCATGGTTTTTCAACATC...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAATCCAGACTGGACTTaGTCTCTATTATCTGACGTT | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISNPDWT*SLLSDV Trigger: AACGTCAGATAATAGAGAGCAAGTCCAGTCTGGATT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCAGTATTTCATGTTCTaGAGCTACAGATTCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISQYFMF*SYRFQL Trigger: AAGCTGGAATCTGTAGCTGCAGAACATGAAATACTG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR CCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAGAAGGGTCACAAAATaGTCAGTTGAGGAACAGTTA | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISRRVTK*SVEEQL Trigger: TAACTGTTCCTCAACTGACCATTTTGTGACCCTTCT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR CCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCATTCCCAATCCAGACTaGACTTGCTCTCTATTATCT | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISIPNPD*TCSLLS Trigger: AGATAATAGAGAGCAAGTCCAGTCTGGATTGGGAAT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR CCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAAGGTTCACAGTTTCTaGGCTTATTTTTCCACCACT | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISKVHSF*AYFSTT Trigger: AGTGGTGGAAAAATAAGCCCAGAAACTGTGAACCTT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTCACTTGGTAATATCTaGTGTGATGTAAACAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISSLGNI*CDVNSR Trigger: ACGACTGTTTACATCACATCAGATATTACCAAGTGA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAGATTGTATATATTCTaGAGACAGTCTCGGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISRLYIF*RQSRVS Trigger: TGAAACCCGAGACTGTCTTCAGAATATATACAATCT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTACTTGACTAAGACATaGAGAAAAGTGCTCATACCT | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISYLTKT*RKVLIP Trigger: AGGTATGAGCACTTTTCTTCATGTCTTAGTCAAGTA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAGAAGTCCTAGTACTTaGCTAAGACATGAAGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISRSPST*LRHEEK Trigger: CTTTTCTTCATGTCTTAGTCAAGTACTAGGACTTCT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAAACTTCAATGGCTTTaGCCATCCTTTCACACTTAT | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISKLQWL*PSFHTY Trigger: ATAAGTGTGAAAGGATGGTCAAAGCCATTGAAGTTT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048374.6 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAGCTTCTTACTGTGTTaGAAGAGATGCTCAATATCA | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISSFLLC*KRCSIS Trigger: TGATATTGAGCATCTCTTTCAACACAGTAAGAAGCT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCATCATTGCTATCATGTaGGAATGTTTGTTCAACTCC | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISIIAIM*ECLFNS Trigger: GGAGTTGAACAAACATTCTCACATGATAGCAATGAT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTTACTTCAATGGCTTTaGCCATCCTTTCACACTTAT | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISLLQWL*PSFHTY Trigger: ATAAGTGTGAAAGGATGGTCAAAGCCATTGAAGTAA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCGTATACATTGTTTGCTaGTATACTTTCTCCAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISVYIVC*YTFSKY Trigger: GTACTTGGAGAAAGTATAGCAGCAAACAATGTATAC...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTCTGTATACATTGTTTaGTGCTATACTTTCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISSVYIV*CYTFSK Trigger: CTTGGAGAAAGTATAGCAGCAAACAATGTATACAGA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAGATGCTCAGTTTCTTaGTGTCTGTATACATTGTTT | + |
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Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISRCSVS*CLYTLF Trigger: AAACAATGTATACAGACAGCAAGAAACTGAGCATCT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS-3UTR CCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAAAAGTGCTCATACCTaGTCAGATAATCAGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISKSAHT*SDNQQF Trigger: AAATTGCTGATTATCTGACCAGGTATGAGCACTTTT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCGTAATTCTAAAACCTTaGAAGAAGAATCAGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRSLGVKTHEVHSKLKISVILKP*KKNQGL Trigger: AAGACCCTGATTCTTCTTCCAAGGTTTTAGAATTAC...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS GCA 90 bp | CCTGGGCAGATGCTCAGTTTCTTGCTGTCTGTATACATTGTTTGCTaGTATACTTTCTCCAAGTACGAAGGCAGGGAAATCGGGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGQMLSFLLSVYIVC*YTFSKYEGREIGQG Trigger: CCCCTGCCCGATTTCCCTGCCTTCGTACTTGGAGAAAGTATAGCAGCAAACAATGTATACAGACAGCAAGAAACTGAGCATCTGCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCGGCTTCCCAGAATGTaGCCAGATGGAGACTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISRLPRM*PDGDCS Trigger: TGAACAGTCTCCATCTGGCAACATTCTGGGAAGCCG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTGCCTCTGTCTCTGCTaGCGTTCTCTGACAGCGATA | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISCLCLC*RSLTAI Trigger: TATCGCTGTCAGAGAACGCAAGCAGAGACAGAGGCA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS TCA 90 bp | TTCCCAGAATGTTGCCAGATGGAGACTGTTCAAACATCATCTGACTaGGTACATGGCGCAGCTGAGTCACTGCACAGAAGGCAAGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FPECCQMETVQTSSD*VHGAAESLHRRQEV Trigger: TACTTCTTGCCTTCTGTGCAGTGACTCAGCTGCGCCATGTACTCAGTCAGATGATGTTTGAACAGTCTCCATCTGGCAACATTCTGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS CCA 90 bp | AACTCCAATGCTAACACAGAACAGTTTTCAGCTCCATCCAAGGGTTaGCTTAACCAGCGAAGTAGAGCCGCAGTAGGCTCTAAGCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: NSNANTEQFSAPSKG*LNQRSRAAVGSKLL Trigger: TAAGAGCTTAGAGCCTACTGCGGCTCTACTTCGCTGGTTAAGCCAACCCTTGGATGGAGCTGAAAACTGTTCTGTGTTAGCATTGGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCAGAATCGGCTACCTTaGTTCCAAACCCCAGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISQNRLP*FQTPGQ Trigger: TTGACCTGGGGTTTGGAACAAAGGTAGCCGATTCTG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCAAGAGCCAGGGCTTTaGCTTCCAGGAGATCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISQEPGL*LPGDLV Trigger: TACAAGATCTCCTGGAAGCAAAAGCCCTGGCTCTTG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS GCA 90 bp | TTTCCTGGGCAGATGCTCAGTTTCTTGCTGTCTGTATACATTGTTTaGTGCTATACTTTCTCCAAGTACGAAGGCAGGGAAATCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FPGQMLSFLLSVYIV*CYTFSKYEGREIGQ Trigger: CTGCCCGATTTCCCTGCCTTCGTACTTGGAGAAAGTATAGCAGCAAACAATGTATACAGACAGCAAGAAACTGAGCATCTGCCCAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCAGTCGTGTGAGCTTTaGTCCAGAAACTACCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISQSCEL*SRNYLQ Trigger: TTGGAGGTAGTTTCTGGACAAAAGCTCACACGACTG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS TCA 90 bp | AAACACGGAATCATTGTGGCAAGCGCTGCTCCGACAAACCACTCCTaGCAGCACACTATTCAGATTGTATATATTCTGAAGACAGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KHGIIVASAAPTNHS*QHTIQIVYILKTVS Trigger: CGAGACTGTCTTCAGAATATATACAATCTGAATAGTGTGCTGTCAGGAGTGGTTTGTCGGAGCAGCGCTTGCCACAATGATTCCGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS GCA 90 bp | GCAGTTGAATGCACTGTAAAAACACGGAATCATTGTGGCAAGCGCTaGTCCGACAAACCACTCCTGACAGCACACTATTCAGATTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: AVECTVKTRNHCGKR*SDKPLLTAHYSDCI Trigger: TATACAATCTGAATAGTGTGCTGTCAGGAGTGGTTTGTCGGAGCAGCGCTTGCCACAATGATTCCGTGTTTTTACAGTGCATTCAACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS GCA 90 bp | GGCAGGGGAGAGGCTTCAAGCAGTATTCCCAATCCAGACTGGACTTaGTCTCTATTATCTGACGTTAAAGCAAAAGCTAAAGGAGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: GRGEASSSIPNPDWT*SLLSDVKAKAKGVI Trigger: GATTACTCCTTTAGCTTTTGCTTTAACGTCAGATAATAGAGAGCAAGTCCAGTCTGGATTGGGAATACTGCTTGAAGCCTCTCCCCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCGTCCTAGACAAGGCATaGTTAGCTCATCTTCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISVLDKA*LAHLQK Trigger: CTTCTGAAGATGAGCTAACAATGCCTTGTCTAGGAC...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTGTGCCGACAAAGATTaGCCAATAGTCCTAGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISCADKD*PIVLDK Trigger: CTTGTCTAGGACTATTGGCAAATCTTTGTCGGCACA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCGTGAAGCACTTATGTTaGGGTCTTCGAGAAGTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISVKHLC*GLREVL Trigger: TAGAACTTCTCGAAGACCCAAACATAAGTGCTTCAC...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCAACTGAGTACTTTCTaGTTAGGGTACCATCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISQLSTF*LGYHHH Trigger: ATGGTGATGGTACCCTAACAAGAAAGTACTCAGTTG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTCCTCGAAGATTTCCTaGAACAACTCCAATGCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISSSKIS*NNSNAN Trigger: GTTAGCATTGGAGTTGTTCAAGGAAATCTTCGAGGA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCGGTCTCATCCAGATTTaGTTCTTTGAACTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISGLIQI*FFELKL Trigger: CAGCTTCAGTTCAAAGAACAAAATCTGGATGAGACC...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCGAGGCGTTAAGCACTTaGCTGATGTTGAAAAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISEALST*LMLKNH Trigger: ATGGTTTTTCAACATCAGCAAAGTGCTTAACGCCTC...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAGCTCAAGCATTCACTaGGTAATATCTGATGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISSSSIH*VISDVM Trigger: CATCACATCAGATATTACCAAGTGAATGCTTGAGCT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTCACAAAATGGTCAGTaGAGGAACAGTTACCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISSQNGQ*RNSYQY Trigger: ATACTGGTAACTGTTCCTCAACTGACCATTTTGTGA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCAGATGCTCAGTTTCTaGCTGTCTGTATACATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISQMLSF*LSVYIV Trigger: AACAATGTATACAGACAGCAAGAAACTGAGCATCTG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCCAGCTTCTTACTGTGTaGAAAGAGATGCTCAATATC | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISQLLTV*KEMLNI Trigger: GATATTGAGCATCTCTTTCAACACAGTAAGAAGCTG...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCGTTCCATGTAGGACTTaGTCAGTATTTCATGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISVPCRT*SVFHVL Trigger: CAGAACATGAAATACTGACAAAGTCCTACATGGAAC...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS TCA 90 bp | TCGAGAAGTTCTACAAGGCAGCTCAAGCATTCACTTGGTAATATCTaGTGTGATGTAAACAGTCGTGTGAGCTTTTGTCCAGAAACTACC | + |
|
Preference number: 5 (lower is better) Translates to: SRSSTRQLKHSLGNI*CDVNSRVSFCPETT Trigger: GGTAGTTTCTGGACAAAAGCTCACACGACTGTTTACATCACATCAGATATTACCAAGTGAATGCTTGAGCTGCCTTGTAGAACTTCTCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAGTAATTCTAAAACCTaGGAAGAAGAATCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISSNSKT*EEESGS Trigger: AGACCCTGATTCTTCTTCCAAGGTTTTAGAATTACT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCGTCTGTATACATTGTTaGCTGCTATACTTTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISVCIHC*LLYFLQ Trigger: TTGGAGAAAGTATAGCAGCAAACAATGTATACAGAC...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTGCTGTCTGTATACATaGTTTGCTGCTATACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISCCLYT*FAAILS Trigger: AGAAAGTATAGCAGCAAACAATGTATACAGACAGCA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCAGCACTTTGCTGATGTaGAAAAACCATGATTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISSTLLM*KNHDLR Trigger: CCTTAAATCATGGTTTTTCAACATCAGCAAAGTGCT...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTTTTCATTTTGTTGCTaGAGCGCCTCGTTCAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISFSFCC*SASFNF Trigger: AAAATTGAACGAGGCGCTCAAGCAACAAAATGAAAA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATCACTGGGAGTTAAGACACATGAGGTCCACAGTAAGCTCAAGATTAGCTTTGTTCAACTCCTCTaGCTGAAGTTTCAACAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGVKTHEVHSKLKISFVQLL*LKFQQR Trigger: TCTTTGTTGAAACTTCAGCAAGAGGAGTTGAACAAA...GCTAATCTTGAGCTTACTGTGGACCTCATGTGTCTTAACTCCCAGTGATCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS TCA 90 bp | CTGATCAAGAATTGTAGGAAGCAGAAGGGTCACAAAATGGTCAGTTaGGGAACAGTTACCAGTATCAATGACATCCTCGAAGATTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIKNCRKQKGHKMVS*GTVTSINDILEDFL Trigger: AAGGAAATCTTCGAGGATGTCATTGATACTGGTAACTGTTCCTCAACTGACCATTTTGTGACCCTTCTGCTTCCTACAATTCTTGATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS GCA 90 bp | GCTACCTTTGTTCCAAACCCCAGGTCAATCTTGCCATATGTAAACTaGTGCTCTATAAGCGTGGTGCACTTTAGAGTAGTCAATATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ATFVPNPRSILPYVN*CSISVVHFRVVNIF Trigger: AAAAATATTGACTACTCTAAAGTGCACCACGCTTATAGAGCAGCAGTTTACATATGGCAAGATTGACCTGGGGTTTGGAACAAAGGTAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS CCA 90 bp | CTGATGTTGAAAAACCATGATTTAAGGGCTGGAAAGTCATTTTCCTaGGCAGATGCTCAGTTTCTTGCTGTCTGTATACATTGTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LMLKNHDLRAGKSFS*ADAQFLAVCIHCLL Trigger: CAGCAAACAATGTATACAGACAGCAAGAAACTGAGCATCTGCCCAGGAAAATGACTTTCCAGCCCTTAAATCATGGTTTTTCAACATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS GCA 90 bp | ACCTTTGTTCCAAACCCCAGGTCAATCTTGCCATATGTAAACTGCTaGTCTATAAGCGTGGTGCACTTTAGAGTAGTCAATATTTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: TFVPNPRSILPYVNC*SISVVHFRVVNIFT Trigger: TGTAAAAATATTGACTACTCTAAAGTGCACCACGCTTATAGAGCAGCAGTTTACATATGGCAAGATTGACCTGGGGTTTGGAACAAAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS GCA 90 bp | TCTTTGAACAAGTTCCATGTAGGACTTTGTCAGTATTTCATGTTCTaGAGCTACAGATTCCAGCTTCTTACTGTGTTGAAAGAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLNKFHVGLCQYFMF*SYRFQLLTVLKEML Trigger: GAGCATCTCTTTCAACACAGTAAGAAGCTGGAATCTGTAGCTGCAGAACATGAAATACTGACAAAGTCCTACATGGAACTTGTTCAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS TCA 72 bp | TTTTGTCCAGAAACTACCTCCAAGTGCCTCAGCAGCTaGGTGGCGTTCGCCTCCGACTTAACGGCCTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: FCPETTSKCLSS*VAFASDLTALY Trigger: GTACAAGGCCGTTAAGTCGGAGGCGAACGCCACTCAGCTGCTGAGGCACTTGGAGGTAGTTTCTGGACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS GCA 72 bp | CTGACAGCGATACTGAGCGATCAGTCTGTCAGCCTGTaGAAGAGCCAGGGCTTTTGCTTCCAGGAGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LTAILSDQSVSL*KSQGFCFQEIL Trigger: CAAGATCTCCTGGAAGCAAAAGCCCTGGCTCTTGCACAGGCTGACAGACTGATCGCTCAGTATCGCTGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS CCA 72 bp | GCTAACACAGAACAGTTTTCAGCTCCATCCAAGGGTTaGCTTAACCAGCGAAGTAGAGCCGCAGTAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ANTEQFSAPSKG*LNQRSRAAVGS Trigger: AGAGCCTACTGCGGCTCTACTTCGCTGGTTAAGCCAACCCTTGGATGGAGCTGAAAACTGTTCTGTGTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS TCA 72 bp | TGTTGCCAGATGGAGACTGTTCAAACATCATCTGACTaGGTACATGGCGCAGCTGAGTCACTGCACAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: CCQMETVQTSSD*VHGAAESLHRR Trigger: CCTTCTGTGCAGTGACTCAGCTGCGCCATGTACTCAGTCAGATGATGTTTGAACAGTCTCCATCTGGCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS GCA 72 bp | TGCACTGTAAAAACACGGAATCATTGTGGCAAGCGCTaGTCCGACAAACCACTCCTGACAGCACACTATTCA | + |
|
Preference number: 6 (lower is better) Translates to: CTVKTRNHCGKR*SDKPLLTAHYS Trigger: TGAATAGTGTGCTGTCAGGAGTGGTTTGTCGGAGCAGCGCTTGCCACAATGATTCCGTGTTTTTACAGTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
||
| CDS TCA 72 bp | GATCCTTTACCATCACTCCAGCCTGCAGTTTCTCTATaGGGTCCTCAATGTTCAACGCAGGAGCATTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: DPLPSLQPAVSL*GPQCSTQEHYL Trigger: AAGATAATGCTCCTGCGTTGAACATTGAGGACCTCATAGAGAAACTGCAGGCTGGAGTGATGGTAAAGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS GCA 72 bp | GTTCCAAACCCCAGGTCAATCTTGCCATATGTAAACTaGTGCTCTATAAGCGTGGTGCACTTTAGAGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: VPNPRSILPYVN*CSISVVHFRVV Trigger: GACTACTCTAAAGTGCACCACGCTTATAGAGCAGCAGTTTACATATGGCAAGATTGACCTGGGGTTTGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS TCA 72 bp | ATCATTGTGGCAAGCGCTGCTCCGACAAACCACTCCTaGCAGCACACTATTCAGATTGTATATATTCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: IIVASAAPTNHS*QHTIQIVYILK Trigger: CTTCAGAATATATACAATCTGAATAGTGTGCTGTCAGGAGTGGTTTGTCGGAGCAGCGCTTGCCACAATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS GCA 72 bp | CCAAACCCCAGGTCAATCTTGCCATATGTAAACTGCTaGTCTATAAGCGTGGTGCACTTTAGAGTAGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: PNPRSILPYVNC*SISVVHFRVVN Trigger: ATTGACTACTCTAAAGTGCACCACGCTTATAGAGCAGCAGTTTACATATGGCAAGATTGACCTGGGGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS TCA 72 bp | AACAAAGACTCCTTCTCTTCCAAACGACCTTCTAATTaGGCCTTGTGCATTTCTAGGGAGGAAGCCTTAATG | + |
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Preference number: 6 (lower is better) Translates to: NKDSFSSKRPSN*ALCISREEALM Trigger: CATTAAGGCTTCCTCCCTAGAAATGCACAAGGCTCAATTAGAAGGTCGTTTGGAAGAGAAGGAGTCTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS TCA 72 bp | CGTAAGCCCTCACCACCATGCTTACTTCAATGGCTTTaGCCATCCTTTCACACTTATTTCTTACTAAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: RKPSPPCLLQWL*PSFHTYFLLRS Trigger: AGACCTTAGTAAGAAATAAGTGTGAAAGGATGGTCAAAGCCATTGAAGTAAGCATGGTGGTGAGGGCTTACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117994.8 |
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| CDS CAA 72 bp | GCCGACAAAGATTTGCCAATAGTCCTAGACAAGGCATaGTTAGCTCATCTTCAGAAGACTGAACATGACCAA | + |
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Preference number: 6 (lower is better) Translates to: ADKDLPIVLDKA*LAHLQKTEHDQ Trigger: TTGGTCATGTTCAGTCTTCTGAAGATGAGCTAACAATGCCTTGTCTAGGACTATTGGCAAATCTTTGTCGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS GCA 72 bp | GAGGCTTCAAGCAGTATTCCCAATCCAGACTGGACTTaGTCTCTATTATCTGACGTTAAAGCAAAAGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: EASSSIPNPDWT*SLLSDVKAKAK Trigger: TTTAGCTTTTGCTTTAACGTCAGATAATAGAGAGCAAGTCCAGTCTGGATTGGGAATACTGCTTGAAGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS CAA 72 bp | GAGCATTATCTTTTGAAGGAGGAGGCGTTAAGCACTTaGCTGATGTTGAAAAACCATGATTTAAGGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: EHYLLKEEALST*LMLKNHDLRAG Trigger: TCCAGCCCTTAAATCATGGTTTTTCAACATCAGCAAAGTGCTTAACGCCTCCTCCTTCAAAAGATAATGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS CAA 90 bp | ACTGTGGATCATTGCTATCATGTGAGAATGTTTGTTCAACTCCTCTaGCTGAAGTTTCAACAAAGACTCCTTCTCTTCCAAACGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: TVDHCYHVRMFVQLL*LKFQQRLLLFQTTF Trigger: GAAGGTCGTTTGGAAGAGAAGGAGTCTTTGTTGAAACTTCAGCAAGAGGAGTTGAACAAACATTCTCACATGATAGCAATGATCCACAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS CAA 90 bp | AAAGATTGTGCCGACAAAGATTTGCCAATAGTCCTAGACAAGGCATaGTTAGCTCATCTTCAGAAGACTGAACATGACCAATCAAGAATG | + |
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Preference number: 6 (lower is better) Translates to: KDCADKDLPIVLDKA*LAHLQKTEHDQSRM Trigger: CATTCTTGATTGGTCATGTTCAGTCTTCTGAAGATGAGCTAACAATGCCTTGTCTAGGACTATTGGCAAATCTTTGTCGGCACAATCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS TCA 72 bp | GAATCAGGGTCTTTTGCATTTAGAAGTCCTAGTACTTaGCTAAGACATGAAGAAAAGTGCTCATACCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: ESGSFAFRSPST*LRHEEKCSYLV Trigger: GACCAGGTATGAGCACTTTTCTTCATGTCTTAGTCAAGTACTAGGACTTCTAAATGCAAAAGACCCTGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS CCA 72 bp | AAAAACCATGATTTAAGGGCTGGAAAGTCATTTTCCTaGGCAGATGCTCAGTTTCTTGCTGTCTGTATACAT | + |
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Preference number: 6 (lower is better) Translates to: KNHDLRAGKSFS*ADAQFLAVCIH Trigger: ATGTATACAGACAGCAAGAAACTGAGCATCTGCCCAGGAAAATGACTTTCCAGCCCTTAAATCATGGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS CCA 72 bp | TGCAAATTTGATAGTTTACATTCTCGGTCTGCTAACTaGCTCTGGACTTCTTTTCTCTGCTCTTCTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CKFDSLHSRSAN*LWTSFLCSSFS Trigger: AGAGAAAGAAGAGCAGAGAAAAGAAGTCCAGAGCCAGTTAGCAGACCGAGAATGTAAACTATCAAATTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS CAA 72 bp | CTTTTGAAGGAGGAGGCGTTAAGCACTTTGCTGATGTaGAAAAACCATGATTTAAGGGCTGGAAAGTCATTT | + |
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Preference number: 6 (lower is better) Translates to: LLKEEALSTLLM*KNHDLRAGKSF Trigger: AAATGACTTTCCAGCCCTTAAATCATGGTTTTTCAACATCAGCAAAGTGCTTAACGCCTCCTCCTTCAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS CAA 90 bp | TCACAGTTTCTGGGCTTATTTTTCCACCACTTAAACTGTGGATCATaGCTATCATGTGAGAATGTTTGTTCAACTCCTCTTGCTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SQFLGLFFHHLNCGS*LSCENVCSTPLAEV Trigger: AACTTCAGCAAGAGGAGTTGAACAAACATTCTCACATGATAGCAATGATCCACAGTTTAAGTGGTGGAAAAATAAGCCCAGAAACTGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS TCA 72 bp | ACTCCTGACAGCACACTATTCAGATTGTATATATTCTaGAGACAGTCTCGGGTTTCATTATCTATAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: TPDSTLFRLYIF*RQSRVSLSIAS Trigger: ACTGGCTATAGATAATGAAACCCGAGACTGTCTTCAGAATATATACAATCTGAATAGTGTGCTGTCAGGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS TCA 72 bp | ACATCCATGATGTCAGATATTCTTATATCACTAATCTaGTCCTTTACCATCACTCCAGCCTGCAGTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TSMMSDILISLI*SFTITPACSFS Trigger: AGAGAAACTGCAGGCTGGAGTGATGGTAAAGGATCAGATTAGTGATATAAGAATATCTGACATCATGGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS CAA 72 bp | TTTGTGTTTGAACAGAAAGATTGTGCCGACAAAGATTaGCCAATAGTCCTAGACAAGGCATTGTTAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: FVFEQKDCADKD*PIVLDKALLAH Trigger: ATGAGCTAACAATGCCTTGTCTAGGACTATTGGCAAATCTTTGTCGGCACAATCTTTCTGTTCAAACACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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| CDS TCA 72 bp | CGTCTCCACACAGAGTTAATAAAACTTCAATGGCTTTaGCCATCCTTTCACACTTATTTCTTACTAAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: RLHTELIKLQWL*PSFHTYFLLRS Trigger: AGACCTTAGTAAGAAATAAGTGTGAAAGGATGGTCAAAGCCATTGAAGTTTTATTAACTCTGTGTGGAGACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048374.6 |
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| CDS CAA 90 bp | AAGTTTTTATTTGTGTTTGAACAGAAAGATTGTGCCGACAAAGATTaGCCAATAGTCCTAGACAAGGCATTGTTAGCTCATCTTCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: KFLFVFEQKDCADKD*PIVLDKALLAHLQK Trigger: CTTCTGAAGATGAGCTAACAATGCCTTGTCTAGGACTATTGGCAAATCTTTGTCGGCACAATCTTTCTGTTCAAACACAAATAAAAACTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048374.6 ENSMUST00000117994.8 |
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