Pregenerated sensors for CINP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021276Ensembl transcript IDs: ENSMUST00000043716.9, ENSMUST00000220607.2, ENSMUST00000221102.2, ENSMUST00000221182.2, ENSMUST00000221414.2, ENSMUST00000222457.2, ENSMUST00000223079.2, ENSMUST00000223170.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCTATGTAGGGCTGGTGCAGCCACATGGACAGGTAGGTCAGGCTaGGGTTGCGATCTGCAGTATGGGCCAGCTCTGCGCCAATGGTGT | + |
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Preference number: 1 (lower is better) Translates to: SLCRAGAATWTGRSG*GCDLQYGPALRQWC Trigger: ACACCATTGGCGCAGAGCTGGCCCATACTGCAGATCGCAACCTCAGCCTGACCTACCTGTCCATGTGGCTGCACCAGCCCTACATAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
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| 3UTR TCA 90 bp | TATGTCAAGGCAGAAGGCAAGGACCCACAACCCAAAGCTGTCCTCTaGCCTGCACACATGCAACGTAGCTCAAGTGTGCCTATACAGACA | + |
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Preference number: 1 (lower is better) Translates to: YVKAEGKDPQPKAVL*PAHMQRSSSVPIQT Trigger: TGTCTGTATAGGCACACTTGAGCTACGTTGCATGTGTGCAGGTCAGAGGACAGCTTTGGGTTGTGGGTCCTTGCCTTCTGCCTTGACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
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| 3UTR CCA 90 bp | ACATCTAGCACGGCCAGGCCCCAGATACAAACAGTCTGCAACTGCTaGTCTTTGTATTGGCTTGTCCATTTTCTCAGGCAAGCAGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: TSSTARPQIQTVCNC*SLYWLVHFLRQAAA Trigger: TGCTGCTGCTTGCCTGAGAAAATGGACAAGCCAATACAAAGACCAGCAGTTGCAGACTGTTTGTATCTGGGGCCTGGCCGTGCTAGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
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| 3UTR CCA 90 bp | TTCCAGAGGACTGACTGGAGTTTGGTTTCTAACACCCAAATCAGGTaGCTGACAACCTCTTGTAGTTCTAACTCCAAGGAGCCCACTCCC | + |
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Preference number: 1 (lower is better) Translates to: FQRTDWSLVSNTQIR*LTTSCSSNSKEPTP Trigger: GGGAGTGGGCTCCTTGGAGTTAGAACTACAAGAGGTTGTCAGCCACCTGATTTGGGTGTTAGAAACCAAACTCCAGTCAGTCCTCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR TCA 90 bp | AGAGGACTGACTGGAGTTTGGTTTCTAACACCCAAATCAGGTGGCTaGCAACCTCTTGTAGTTCTAACTCCAAGGAGCCCACTCCCATTT | + |
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Preference number: 1 (lower is better) Translates to: RGLTGVWFLTPKSGG*QPLVVLTPRSPLPF Trigger: AAATGGGAGTGGGCTCCTTGGAGTTAGAACTACAAGAGGTTGTCAGCCACCTGATTTGGGTGTTAGAAACCAAACTCCAGTCAGTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR GCA 90 bp | CGTAGTCCAGATTTGTCTTTTCTTCCTCTTCCATGGAAGCTGGGCTaGTGCTCTCTAACTCAACCTTCTCTTTACTCTAGTCACTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: RSPDLSFLPLPWKLG*CSLTQPSLYSSHCP Trigger: TGGGCAGTGACTAGAGTAAAGAGAAGGTTGAGTTAGAGAGCAGCAGCCCAGCTTCCATGGAAGAGGAAGAAAAGACAAATCTGGACTACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223079.2 |
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| 3UTR GCA 90 bp | ACCTCTTGTAGTTCTAACTCCAAGGAGCCCACTCCCATTTACAGTTaGCCTGGTCATCTATACATTCGGCCGATACACAGATACCTAAGT | + |
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Preference number: 1 (lower is better) Translates to: TSCSSNSKEPTPIYS*PGHLYIRPIHRYLS Trigger: ACTTAGGTATCTGTGTATCGGCCGAATGTATAGATGACCAGGGCAACTGTAAATGGGAGTGGGCTCCTTGGAGTTAGAACTACAAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCAGCAGTGCCTGTGTCTGGAGAGGCTGCAGCAGCGGGAAGAGTGATCCCGTCCAGCCAGTGGCCTaGAGCTCCAAGCTGTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: QLSSACVWRGCSSGKSDPVQPVA*SSKLWS Trigger: TGACCACAGCTTGGAGCTCCAGGCCACTGGCTGGAC...GGGATCACTCTTCCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCTGAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGAGTGATCCCAGGACCCTCAAAGTATCTGGCCTTGAGGCACAACAGGTTGTCCAGCCAGTGGCCTaGAGCTCCAAGCTGTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: GKSDPRTLKVSGLEAQQVVQPVA*SSKLWS Trigger: TGACCACAGCTTGGAGCTCCAGGCCACTGGCTGGAC...AACCTGTTGTGCCTCAAGGCCAGATACTTTGAGGGTCCTGGGATCACTCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTCAGTCAGTTTTCTATGCAGCAGCAGTGCTTTAGCTCCAAAGAGCCGGCGGCTTATGGCGCCTCTGTaGGCCTGGGCTTTCTTACTC | + |
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Preference number: 2 (lower is better) Translates to: VSVSFLCSSSALAPKSRRLMAPL*AWAFLL Trigger: GAGTAAGAAAGCCCAGGCTCACAGAGGCGCCATAAG...CCGCCGGCTCTTTGGAGCTAAAGCACTGCTGCTGCATAGAAAACTGACTGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTGGCTGACAACCTCTTGTAGTTCTAACTCCAAGGAGCCCACTCCCATTTACAGGACAGCTCAGCAGTaGCTGTGTCTGGAGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: RWLTTSCSSNSKEPTPIYRTAQQ*LCLERL Trigger: CAGCCTCTCCAGACACAGGCACTGCTGAGCTGTCCT...GTAAATGGGAGTGGGCTCCTTGGAGTTAGAACTACAAGAGGTTGTCAGCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCACAGATTTATAAAACTGCCCTCAGCTGTTCTTGTTTCTGTCACTCAGTGAGCAGTGCCTGTGTCTaGAGAGGCTGCAGCAGCGGG | + |
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Preference number: 2 (lower is better) Translates to: SPQIYKTALSCSCFCHSVSSACV*RGCSSG Trigger: CCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCT...CACTGAGTGACAGAAACAAGAACAGCTGAGGGCAGTTTTATAAATCTGTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCTATGTCAAGGCAGAAGGCAAGGACCCACAACCCAAAGCTGTCCTCTGACCACTCCCATTTACAGTTaGCCTGGTCATCTATACATT | + |
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Preference number: 2 (lower is better) Translates to: ALCQGRRQGPTTQSCPLTTPIYS*PGHLYI Trigger: AATGTATAGATGACCAGGGCAACTGTAAATGGGAGT...GGTCAGAGGACAGCTTTGGGTTGTGGGTCCTTGCCTTCTGCCTTGACATAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
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| 3UTR-3UTR CCA 90 bp | CAACCTCTTGTAGTTCTAACTCCAAGGAGCCCACTCCCATTTACAGTTGCCCTGGGCAGTGTGGACCAGTaGTTGAATATTCAGCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: QPLVVLTPRSPLPFTVALGSVDQ*LNIQLV Trigger: CACAAGCTGAATATTCAACCACTGGTCCACACTGCC...CAGGGCAACTGTAAATGGGAGTGGGCTCCTTGGAGTTAGAACTACAAGAGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR-3UTR GCA 90 bp | AAAACATTCTCTTCAAAGCACAGGGTTGGCAGTGTGGACCAGTGGTTGAATATTTGTGTCTGGAGAGGCTaGAGCAGCGGGAAGAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: KTFSSKHRVGSVDQWLNICVWRG*SSGKSD Trigger: ATCACTCTTCCCGCTGCTGCAGCCTCTCCAGACACA...AATATTCAACCACTGGTCCACACTGCCAACCCTGTGCTTTGAAGAGAATGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTATAGCAGTGAACAAGAGGCCCTATGTCAAGGCAGAAGGCAAGGACCCACATTTACAGTTGCCCTaGTCATCTATACATTCGGCC | + |
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Preference number: 2 (lower is better) Translates to: VFIAVNKRPYVKAEGKDPHLQLP*SSIHSA Trigger: GGCCGAATGTATAGATGACCAGGGCAACTGTAAATG...TGGGTCCTTGCCTTCTGCCTTGACATAGGGCCTCTTGTTCACTGCTATAAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
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| 3UTR-3UTR TCA 90 bp | AAAACATTCTCTTCAAAGCACAGGGTTGGCAGTGTGGACCAGTGGTTGAATATTTGTGAAGTCTTGATTTaGTTTGATTTCCAGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: KTFSSKHRVGSVDQWLNICEVLI*FDFQHH Trigger: GTGGTGCTGGAAATCAAATCAAATCAAGACTTCACA...AATATTCAACCACTGGTCCACACTGCCAACCCTGTGCTTTGAAGAGAATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR-3UTR TCA 90 bp | AAAACATTCTCTTCAAAGCACAGGGTTGGCAGTGTGGACCAGTGGTTGAATATTGCTTGTGTGAAGTCTTaGTTTGATTTGATTTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: KTFSSKHRVGSVDQWLNIACVKS*FDLISS Trigger: GCTGGAAATCAAATCAAATCAAGACTTCACACAAGC...AATATTCAACCACTGGTCCACACTGCCAACCCTGTGCTTTGAAGAGAATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR CCA 72 bp | GAAGCAGCGGGAGGACAGCTCAGCAGTGCCTGTGTCTaGAGAGGCTGCAGCAGCGGGAAGAGTGATCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: EAAGGQLSSACV*RGCSSGKSDPR Trigger: CCTGGGATCACTCTTCCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCTGAGCTGTCCTCCCGCTGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| 3UTR TCA 72 bp | AGGGCTGGTGCAGCCACATGGACAGGTAGGTCAGGCTaGGGTTGCGATCTGCAGTATGGGCCAGCTCTGCGC | + |
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Preference number: 3 (lower is better) Translates to: RAGAATWTGRSG*GCDLQYGPALR Trigger: GCGCAGAGCTGGCCCATACTGCAGATCGCAACCTCAGCCTGACCTACCTGTCCATGTGGCTGCACCAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
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| 3UTR GCA 72 bp | GGAGGACAGCTCAGCAGTGCCTGTGTCTGGAGAGGCTaGAGCAGCGGGAAGAGTGATCCCAGGACCCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: GGQLSSACVWRG*SSGKSDPRTLK Trigger: TTTGAGGGTCCTGGGATCACTCTTCCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCTGAGCTGTCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| 3UTR TCA 72 bp | CAGGAAGGAGTGAAAGGAGGAAGTGCAAGCGGCCCCTaGCCTAACTGTGAGGGCCAGCTGACCTCACTATGC | + |
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Preference number: 3 (lower is better) Translates to: QEGVKGGSASGP*PNCEGQLTSLC Trigger: GCATAGTGAGGTCAGCTGGCCCTCACAGTTAGGTCAGGGGCCGCTTGCACTTCCTCCTTTCACTCCTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
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| 3UTR-3UTR CAA 90 bp | AGCTCAGCAGTGCCTGTGTCTGGAGAGGCTGCAGCAGCGGGAAGAGTGATCCCATCAAAGTATCTGGCCTaGAGGCACAACAGGTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: SSAVPVSGEAAAAGRVIPSKYLA*RHNRFH Trigger: GTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGA...TGGGATCACTCTTCCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCTATGTCAAGGCAGAAGGCAAGGACCCACAACCCAAAGCTGTCCTCTGACCCTTCAAAGCACAGGGTaGGCAGTGTGGACCAGTGGT | + |
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Preference number: 3 (lower is better) Translates to: ALCQGRRQGPTTQSCPLTLQSTG*AVWTSG Trigger: ACCACTGGTCCACACTGCCAACCCTGTGCTTTGAAG...GGTCAGAGGACAGCTTTGGGTTGTGGGTCCTTGCCTTCTGCCTTGACATAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
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| 3UTR GCA 72 bp | TGTGTGTTGCTGCCAGGGGAGGCCAGAAGTCCACAGTaGTCTCAACTGCTAACTCACCACTCTGTCCCTACT | + |
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Preference number: 3 (lower is better) Translates to: CVLLPGEARSPQ*SQLLTHHSVPT Trigger: AGTAGGGACAGAGTGGTGAGTTAGCAGTTGAGAGCACTGTGGACTTCTGGCCTCCCCTGGCAGCAACACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR TCA 72 bp | CCCAGTGGTCTTAGTGTGTTCCCTATCAGGAAGGAGTaGAAGGAGGAAGTGCAAGCGGCCCCTGACCTAACT | + |
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Preference number: 3 (lower is better) Translates to: PSGLSVFPIRKE*KEEVQAAPDLT Trigger: AGTTAGGTCAGGGGCCGCTTGCACTTCCTCCTTTCACTCCTTCCTGATAGGGAACACACTAAGACCACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
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| 3UTR GCA 72 bp | AGCACGGCCAGGCCCCAGATACAAACAGTCTGCAACTaGTGGTCTTTGTATTGGCTTGTCCATTTTCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: STARPQIQTVCN*WSLYWLVHFLR Trigger: CCTGAGAAAATGGACAAGCCAATACAAAGACCAGCAGTTGCAGACTGTTTGTATCTGGGGCCTGGCCGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
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| 3UTR-3UTR CAA 90 bp | CCGATACACAGATACCTAAGTAATTTGTGTGTTGCTGCCAGGGGAGGCCAGAAGTGCCCTCAGCTGTTCTaGTTTCTGTCACTCAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: PIHRYLSNLCVAARGGQKCPQLF*FLSLSG Trigger: TCCACTGAGTGACAGAAACAAGAACAGCTGAGGGCA...CTTCTGGCCTCCCCTGGCAGCAACACACAAATTACTTAGGTATCTGTGTATCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR CCA 72 bp | ACGGCCAGGCCCCAGATACAAACAGTCTGCAACTGCTaGTCTTTGTATTGGCTTGTCCATTTTCTCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: TARPQIQTVCNC*SLYWLVHFLRQ Trigger: TTGCCTGAGAAAATGGACAAGCCAATACAAAGACCAGCAGTTGCAGACTGTTTGTATCTGGGGCCTGGCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
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| 3UTR GCA 72 bp | AGTTCTAACTCCAAGGAGCCCACTCCCATTTACAGTTaGCCTGGTCATCTATACATTCGGCCGATACACAGA | + |
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Preference number: 3 (lower is better) Translates to: SSNSKEPTPIYS*PGHLYIRPIHR Trigger: TCTGTGTATCGGCCGAATGTATAGATGACCAGGGCAACTGTAAATGGGAGTGGGCTCCTTGGAGTTAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR GCA 72 bp | ACATCTAGCACGGCCAGGCCCCAGATACAAACAGTCTaGAACTGCTGGTCTTTGTATTGGCTTGTCCATTTT | + |
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Preference number: 3 (lower is better) Translates to: TSSTARPQIQTV*NCWSLYWLVHF Trigger: AAAATGGACAAGCCAATACAAAGACCAGCAGTTGCAGACTGTTTGTATCTGGGGCCTGGCCGTGCTAGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
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| 3UTR GCA 72 bp | TATTTTAGTCTCAGTCAGTTTTCTATGCAGCAGCAGTaGTTTAGCTCCAAAGAGCCGGCGGAATCCCAATGG | + |
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Preference number: 3 (lower is better) Translates to: YFSLSQFSMQQQ*FSSKEPAESQW Trigger: CCATTGGGATTCCGCCGGCTCTTTGGAGCTAAAGCACTGCTGCTGCATAGAAAACTGACTGAGACTAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
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| 3UTR-3UTR CAA 90 bp | AAAACATTCTCTTCAAAGCACAGGGTTGGCAGTGTGGACCAGTGGTTGAATATTTGCCCTCAGCTGTTCTaGTTTCTGTCACTCAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: KTFSSKHRVGSVDQWLNICPQLF*FLSLSG Trigger: TCCACTGAGTGACAGAAACAAGAACAGCTGAGGGCA...AATATTCAACCACTGGTCCACACTGCCAACCCTGTGCTTTGAAGAGAATGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR TCA 72 bp | TATACAGACACATACACAGAAGGTAGCAATGTGGTCTaGGTATTCCTTCCCCTAAAGATGGGAGCAGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: YTDTYTEGSNVV*VFLPLKMGAVV Trigger: GACCACTGCTCCCATCTTTAGGGGAAGGAATACTCAGACCACATTGCTACCTTCTGTGTATGTGTCTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
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| 3UTR CCA 72 bp | ACTGACTGGAGTTTGGTTTCTAACACCCAAATCAGGTaGCTGACAACCTCTTGTAGTTCTAACTCCAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: TDWSLVSNTQIR*LTTSCSSNSKE Trigger: CTCCTTGGAGTTAGAACTACAAGAGGTTGTCAGCCACCTGATTTGGGTGTTAGAAACCAAACTCCAGTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR-3UTR CAA 90 bp | CCGATACACAGATACCTAAGTAATTTGTGTGTTGCTGCCAGGGGAGGCCAGAAGAATGGGAAACTCAGGTaGTCTCCACAGATTTATAAA | + |
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Preference number: 3 (lower is better) Translates to: PIHRYLSNLCVAARGGQKNGKLR*SPQIYK Trigger: TTTATAAATCTGTGGAGACAACCTGAGTTTCCCATT...CTTCTGGCCTCCCCTGGCAGCAACACACAAATTACTTAGGTATCTGTGTATCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| 3UTR GCA 72 bp | GATTTGTCTTTTCTTCCTCTTCCATGGAAGCTGGGCTaGTGCTCTCTAACTCAACCTTCTCTTTACTCTAGT | + |
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Preference number: 3 (lower is better) Translates to: DLSFLPLPWKLG*CSLTQPSLYSS Trigger: ACTAGAGTAAAGAGAAGGTTGAGTTAGAGAGCAGCAGCCCAGCTTCCATGGAAGAGGAAGAAAAGACAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223079.2 |
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| 3UTR CCA 72 bp | CAGATACAAACAGTCTGCAACTGCTGGTCTTTGTATTaGCTTGTCCATTTTCTCAGGCAAGCAGCAGCAATT | + |
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Preference number: 3 (lower is better) Translates to: QIQTVCNCWSLY*LVHFLRQAAAI Trigger: AATTGCTGCTGCTTGCCTGAGAAAATGGACAAGCCAATACAAAGACCAGCAGTTGCAGACTGTTTGTATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
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| 3UTR-3UTR CAA 90 bp | TACAAAATAGAAATGGGAAACTCAGGTTGTCTCCACAGATTTATAAAACTGCCCTCAAAGTATCTGGCCTaGAGGCACAACAGGTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: YKIEMGNSGCLHRFIKLPSKYLA*RHNRFH Trigger: GTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGA...GGGCAGTTTTATAAATCTGTGGAGACAACCTGAGTTTCCCATTTCTATTTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS-3UTR GCA 90 bp | CCCAAGGGACTGACTGTCCAGCCAGTGGCCTGGAGCTCCAAGCTGTGGTCACAGCCGTCCAAGATGGCCTaGAGCTCCTCACACAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: PKGLTVQPVAWSSKLWSQPSKMA*SSSHSA Trigger: AGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGG...CTGTGACCACAGCTTGGAGCTCCAGGCCACTGGCTGGACAGTCAGTCCCTTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS-3UTR GCA 90 bp | GAGGACAGCTCAGCAGTGCCTGTGTCTGGAGAGGCTGCAGCAGCGGGAAGAGTGCCGTCCAAGATGGCCTaGAGCTCCTCACACAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: EDSSAVPVSGEAAAAGRVPSKMA*SSSHSA Trigger: AGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGG...CACTCTTCCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCTGAGCTGTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS-3UTR GCA 90 bp | CAGCTCAGCAGTGCCTGTGTCTGGAGAGGCTGCAGCAGCGGGAAGAGTGATCCCCTGTCTCGAGCAGCATaGTCTCCAGCTGCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: QLSSACVWRGCSSGKSDPLSRAA*SPAAAC Trigger: GCAAGCTGCAGCTGGAGAGCATGCTGCTCGAGACAG...GGGATCACTCTTCCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCTGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS-3UTR TCA 90 bp | GAGGACAGCTCAGCAGTGCCTGTGTCTGGAGAGGCTGCAGCAGCGGGAAGAGTGCTTATGGCGCCTCTGTaGGCCTGGGCTTTCTTACTC | + |
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Preference number: 4 (lower is better) Translates to: EDSSAVPVSGEAAAAGRVLMAPL*AWAFLL Trigger: GAGTAAGAAAGCCCAGGCTCACAGAGGCGCCATAAG...CACTCTTCCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCTGAGCTGTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220607.2 |
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| CDS-3UTR GCA 90 bp | GGAGGACAGCTCAGCAGTGCCTGTGTCTGGAGAGGCTGCAGCAGCGGGAAGAGTATAGAGGGGGCCGGCTaGTTTCTTCCCTGTAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GGQLSSACVWRGCSSGKSIEGAG*FLPCSG Trigger: ACCACTACAGGGAAGAAAGCAGCCGGCCCCCTCTAT...ACTCTTCCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCTGAGCTGTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS-3UTR GCA 90 bp | GTGCAGCCACATGGACAGGTAGGTCAGGCTGAGGTTGCGATCTGCAGTATGGGCCCGTCCAAGATGGCCTaGAGCTCCTCACACAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQPHGQVGQAEVAICSMGPSKMA*SSSHSA Trigger: AGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGG...GCCCATACTGCAGATCGCAACCTCAGCCTGACCTACCTGTCCATGTGGCTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
||
| CDS-3UTR GCA 90 bp | GGCACAACAGGTTCCACCCAAGGGACTGACTGTCCAGCCAGTGGCCTGGAGCTCGCTGCAGCTTGCTGTTaGTCTCTATGTAGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTTGSTQGTDCPASGLELAAACC*SLCRAG Trigger: ACCAGCCCTACATAGAGAGCAACAGCAAGCTGCAGC...GAGCTCCAGGCCACTGGCTGGACAGTCAGTCCCTTGGGTGGAACCTGTTGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGTTCCACCCAAGGGACTGACTGTCCAGCCAGTGGCCTGGAGCTCCAAGCTACAGGTAGGTCAGGCTaGGGTTGCGATCTGCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TGSTQGTDCPASGLELQATGRSG*GCDLQY Trigger: ATACTGCAGATCGCAACCTCAGCCTGACCTACCTGT...AGCTTGGAGCTCCAGGCCACTGGCTGGACAGTCAGTCCCTTGGGTGGAACCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTCAGCAGTGCCTGTGTCTGGAGAGGCTGCAGCAGCGGGAAGAGTGATCCCTTTCTTCCTCTTCCATaGAAGCTGGGCTGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLSSACVWRGCSSGKSDPFLPLP*KLGCCS Trigger: AGAGCAGCAGCCCAGCTTCCATGGAAGAGGAAGAAA...GGGATCACTCTTCCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCTGAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR GCA 90 bp | GGGTCTCTCTGTATAGCCCAGGCTGGCCTCGAACTCAGAAATCCGTCTGCATCTCCGTCCAAGATGGCCTaGAGCTCCTCACACAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLCIAQAGLELRNPSASPSKMA*SSSHSA Trigger: AGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGG...AGATGCAGACGGATTTCTGAGTTCGAGGCCAGCCTGGGCTATACAGAGAGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222457.2 |
||
| CDS-3UTR GCA 90 bp | TCTATGCAGCAGCAGTGCTTTAGCTCCAAAGAGCCGGCGGAATCCCAATGGGCTCCGTCCAAGATGGCCTaGAGCTCCTCACACAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SMQQQCFSSKEPAESQWAPSKMA*SSSHSA Trigger: AGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGG...AGCCCATTGGGATTCCGCCGGCTCTTTGGAGCTAAAGCACTGCTGCTGCATAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTCAGCAGTGCCTGTGTCTGGAGAGGCTGCAGCAGCGGGAAGAGTGATCCCCTTTACTCAGCAAGCTaGCTTTCAGGTTGGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: QLSSACVWRGCSSGKSDPLYSAS*LSGWQY Trigger: GTATTGCCAACCTGAAAGTCAGCTTGCTGAGTAAAG...GGGATCACTCTTCCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCTGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGACCCTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAAGGGAAGTATGGGCCAGCTCTaGGCCAATGGTGTGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PRTLKVSGLEAQQVPPKGSMGQL*ANGVLQ Trigger: TTGAAGCACACCATTGGCGCAGAGCTGGCCCATACT...TCCCTTGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAGGGTCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCTGTCACTCAGTGGAGCTTCATGACACCCGGGAAGCAGCGGGAGGACAGGCTGCAGCTTGCTGTTaGTCTCTATGTAGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFCHSVELHDTREAAGGQAAACC*SLCRAG Trigger: ACCAGCCCTACATAGAGAGCAACAGCAAGCTGCAGC...CTGTCCTCCCGCTGCTTCCCGGGTGTCATGAAGCTCCACTGAGTGACAGAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR CCA 90 bp | GGCACAACAGGTTCCACCCAAGGGACTGACTGTCCAGCCAGTGGCCTGGAGCTCCATAAAAGAAGGCTGTaGGCCACGTGTGAAATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTTGSTQGTDCPASGLELHKRRL*ATCEIE Trigger: CTCTATTTCACACGTGGCCCACAGCCTTCTTTTATG...GAGCTCCAGGCCACTGGCTGGACAGTCAGTCCCTTGGGTGGAACCTGTTGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGGCTGGTGCAGCCACATGGACAGGTAGGTCAGGCTGAGGTTGCGATCTGCAGGTTTTCTTGGTGTTaGGATCCCAAGAGTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGLVQPHGQVGQAEVAICRFSWC*DPKSLC Trigger: GCAAAGACTCTTGGGATCGCAACACCAAGAAAACCT...GCAGATCGCAACCTCAGCCTGACCTACCTGTCCATGTGGCTGCACCAGCCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCTGCAGCTTGCTGTTGCTCTCTATGTAGGGCTGGTGCAGCCACATGGATGGAAGCTGGGCTGCTaGTCTCTAACTCAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQLQLAVALYVGLVQPHGWKLGC*SLTQPS Trigger: AGAAGGTTGAGTTAGAGAGCAGCAGCCCAGCTTCCA...TCCATGTGGCTGCACCAGCCCTACATAGAGAGCAACAGCAAGCTGCAGCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGCTGCAGCTTGCTGTTGCTCTCTATGTAGGGCTGGTGCAGCCACATGGTTTCTTCCTCTTCCATaGAAGCTGGGCTGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPAAACCCSLCRAGAATWFLPLP*KLGCCS Trigger: AGAGCAGCAGCCCAGCTTCCATGGAAGAGGAAGAAA...CCATGTGGCTGCACCAGCCCTACATAGAGAGCAACAGCAAGCTGCAGCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTTCCACCCAAGGGACTGACTGTCCAGCCAGTGGCCTGGAGCTCCAAGCTGCACAAATTCCCTTGGTaGTTGAAGACAGCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVPPKGLTVQPVAWSSKLHKFPW*LKTAFP Trigger: TGGAAAAGCTGTCTTCAACCACCAAGGGAATTTGTG...CAGCTTGGAGCTCCAGGCCACTGGCTGGACAGTCAGTCCCTTGGGTGGAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGACAGCTCAGCAGTGCCTGTGTCTGGAGAGGCTGCAGCAGCGGGAAGAGTGCTCACAAATTCCCTTaGTGGTTGAAGACAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGQLSSACVWRGCSSGKSAHKFP*WLKTAF Trigger: AAAAGCTGTCTTCAACCACCAAGGGAATTTGTGAGC...ACTCTTCCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCTGAGCTGTCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS-3UTR CCA 90 bp | GGCACAACAGGTTCCACCCAAGGGACTGACTGTCCAGCCAGTGGCCTGGAGCTCGCTCACAAATTCCCTTaGTGGTTGAAGACAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTTGSTQGTDCPASGLELAHKFP*WLKTAF Trigger: AAAAGCTGTCTTCAACCACCAAGGGAATTTGTGAGC...GAGCTCCAGGCCACTGGCTGGACAGTCAGTCCCTTGGGTGGAACCTGTTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTTTCTATGCAGCAGCAGTGCTTTAGCTCCAAAGAGCCGGCGGAATCCCAATGTGCAGACCAGAACTaGGTGCTGGATCCCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QFSMQQQCFSSKEPAESQCADQN*VLDPQA Trigger: GGCTTGGGGATCCAGCACCCAGTTCTGGTCTGCACA...TTGGGATTCCGCCGGCTCTTTGGAGCTAAAGCACTGCTGCTGCATAGAAAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTAGGTCAGGCTGAGGTTGCGATCTGCAGTATGGGCCAGCTCTGCGCCAATCTTTACTCAGCAAGCTaGCTTTCAGGTTGGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: QVGQAEVAICSMGQLCANLYSAS*LSGWQY Trigger: GTATTGCCAACCTGAAAGTCAGCTTGCTGAGTAAAG...ATTGGCGCAGAGCTGGCCCATACTGCAGATCGCAACCTCAGCCTGACCTACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGGACCCTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAAGTGGAAGCTGGGCTGCTaGTCTCTAACTCAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DPRTLKVSGLEAQQVPPKWKLGC*SLTQPS Trigger: AGAAGGTTGAGTTAGAGAGCAGCAGCCCAGCTTCCA...CTTGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAGGGTCCTGGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTTGCTGCCAGGGGAGGCCAGAAGTCCACAGTGCTCTCAACTGCTAACTTGGAAGCTGGGCTGCTaGTCTCTAACTCAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CVLLPGEARSPQCSQLLTWKLGC*SLTQPS Trigger: AGAAGGTTGAGTTAGAGAGCAGCAGCCCAGCTTCCA...AGTTAGCAGTTGAGAGCACTGTGGACTTCTGGCCTCCCCTGGCAGCAACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR GCA 90 bp | ACATGTGCCACCACTGCCCGGCTCAGACAGCAACTTTTAGACACTGGTTTGTTCATAGAGGGGGCCGGCTaGTTTCTTCCCTGTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TCATTARLRQQLLDTGLFIEGAG*FLPCSG Trigger: ACCACTACAGGGAAGAAAGCAGCCGGCCCCCTCTAT...GAACAAACCAGTGTCTAAAAGTTGCTGTCTGAGCCGGGCAGTGGTGGCACATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000221414.2 ENSMUST00000222457.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAAGGGACTGACTGTCAGTATGGGCCAGCTCTaGGCCAATGGTGTGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKVSGLEAQQVPPKGLTVSMGQL*ANGVLQ Trigger: TTGAAGCACACCATTGGCGCAGAGCTGGCCCATACT...GACAGTCAGTCCCTTGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS-3UTR CCA 90 bp | TGTATAGCCCAGGCTGGCCTCGAACTCAGAAATCCGTCTGCATCTGCCTCCCAATTTCTTCCTCTTCCATaGAAGCTGGGCTGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CIAQAGLELRNPSASASQFLPLP*KLGCCS Trigger: AGAGCAGCAGCCCAGCTTCCATGGAAGAGGAAGAAA...TTGGGAGGCAGATGCAGACGGATTTCTGAGTTCGAGGCCAGCCTGGGCTATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222457.2 |
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| CDS-3UTR CCA 90 bp | AGCAGCAGTGCTTTAGCTCCAAAGAGCCGGCGGAATCCCAATGGGCTGCTGTTATTTCTTCCTCTTCCATaGAAGCTGGGCTGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSALAPKSRRNPNGLLLFLPLP*KLGCCS Trigger: AGAGCAGCAGCCCAGCTTCCATGGAAGAGGAAGAAA...TAACAGCAGCCCATTGGGATTCCGCCGGCTCTTTGGAGCTAAAGCACTGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCTATGCAGCAGCAGTGCTTTAGCTCCAAAGAGCCGGCGGAATCCCAATGGTATGTGTGGGTGCTGTaGAGACCAGAACTGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSMQQQCFSSKEPAESQWYVWVL*RPELGA Trigger: AGCACCCAGTTCTGGTCTGCACAGCACCCACACATA...CCATTGGGATTCCGCCGGCTCTTTGGAGCTAAAGCACTGCTGCTGCATAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
||
| CDS-3UTR TCA 90 bp | GATCCCAGGACCCTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAAGCTTTACTCAGCAAGCTaGCTTTCAGGTTGGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: DPRTLKVSGLEAQQVPPKLYSAS*LSGWQY Trigger: GTATTGCCAACCTGAAAGTCAGCTTGCTGAGTAAAG...CTTGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAGGGTCCTGGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR TCA 90 bp | TCTATGCAGCAGCAGTGCTTTAGCTCCAAAGAGCCGGCGGAATCCCAATGGGCTCTTTACTCAGCAAGCTaGCTTTCAGGTTGGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SMQQQCFSSKEPAESQWALYSAS*LSGWQY Trigger: GTATTGCCAACCTGAAAGTCAGCTTGCTGAGTAAAG...AGCCCATTGGGATTCCGCCGGCTCTTTGGAGCTAAAGCACTGCTGCTGCATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCTTGCTGTTGCTCTCTATGTAGGGCTGGTGCAGCCACATGGACAGGTAGGTTCAGGATTAAGTTATaGCAGTCAGCAGCATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AACCCSLCRAGAATWTGRFRIKL*QSAALS Trigger: GGACAATGCTGCTGACTGGCATAACTTAATCCTGAA...CCTACCTGTCCATGTGGCTGCACCAGCCCTACATAGAGAGCAACAGCAAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
||
| CDS-3UTR GCA 90 bp | ATAGCCCAGGCTGGCCTCGAACTCAGAAATCCGTCTGCATCTGCCTCCCAAGTGTTCAGGATTAAGTTATaGCAGTCAGCAGCATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IAQAGLELRNPSASASQVFRIKL*QSAALS Trigger: GGACAATGCTGCTGACTGGCATAACTTAATCCTGAA...CACTTGGGAGGCAGATGCAGACGGATTTCTGAGTTCGAGGCCAGCCTGGGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222457.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCTATGCAGCAGCAGTGCTTTAGCTCCAAAGAGCCGGCGGAATCCCAATGGTGGAAGCTGGGCTGCTaGTCTCTAACTCAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSMQQQCFSSKEPAESQWWKLGC*SLTQPS Trigger: AGAAGGTTGAGTTAGAGAGCAGCAGCCCAGCTTCCA...CCATTGGGATTCCGCCGGCTCTTTGGAGCTAAAGCACTGCTGCTGCATAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
||
| CDS-3UTR GCA 90 bp | AGATACCTAAGTAATTTGTGTGTTGCTGCCAGGGGAGGCCAGAAGTCCACAGTGGCTGCAGCTTGCTGTTaGTCTCTATGTAGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RYLSNLCVAARGGQKSTVAAACC*SLCRAG Trigger: ACCAGCCCTACATAGAGAGCAACAGCAAGCTGCAGC...CACTGTGGACTTCTGGCCTCCCCTGGCAGCAACACACAAATTACTTAGGTATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGGACCCTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAAGGGAAATTCCCTTGGTGGTTaGAGACAGCTTTTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRTLKVSGLEAQQVPPKGNSLGG*RQLFHF Trigger: AAAATGGAAAAGCTGTCTTCAACCACCAAGGGAATT...TCCCTTGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAGGGTCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTGACAACCTCTTGTAGTTCTAACTCCAAGGAGCCCACTCCCATTTACAGTACAGGTAGGTCAGGCTaGGGTTGCGATCTGCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: WLTTSCSSNSKEPTPIYSTGRSG*GCDLQY Trigger: ATACTGCAGATCGCAACCTCAGCCTGACCTACCTGT...ACTGTAAATGGGAGTGGGCTCCTTGGAGTTAGAACTACAAGAGGTTGTCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTTGCTGCCAGGGGAGGCCAGAAGTCCACAGTGCTCTCAACTGCTAACTTTCAGGATTAAGTTATaGCAGTCAGCAGCATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVLLPGEARSPQCSQLLTFRIKL*QSAALS Trigger: GGACAATGCTGCTGACTGGCATAACTTAATCCTGAA...AGTTAGCAGTTGAGAGCACTGTGGACTTCTGGCCTCCCCTGGCAGCAACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGGACCCTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAAGTTCAGGATTAAGTTATaGCAGTCAGCAGCATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPRTLKVSGLEAQQVPPKFRIKL*QSAALS Trigger: GGACAATGCTGCTGACTGGCATAACTTAATCCTGAA...CTTGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAGGGTCCTGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAGTGCTTTAGCTCCAAAGAGCCGGCGGAATCCCAATGGGCTGCTGTTATTCAGGATTAAGTTATaGCAGTCAGCAGCATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSALAPKSRRNPNGLLLFRIKL*QSAALS Trigger: GGACAATGCTGCTGACTGGCATAACTTAATCCTGAA...TAACAGCAGCCCATTGGGATTCCGCCGGCTCTTTGGAGCTAAAGCACTGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTTGCTGCCAGGGGAGGCCAGAAGTCCACAGTGCTCTCAACTGCTAACTCACAAATTCCCTTGGTaGTTGAAGACAGCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVLLPGEARSPQCSQLLTHKFPW*LKTAFP Trigger: TGGAAAAGCTGTCTTCAACCACCAAGGGAATTTGTG...AGTTAGCAGTTGAGAGCACTGTGGACTTCTGGCCTCCCCTGGCAGCAACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTGTATAGCCCAGGCTGGCCTCGAACTCAGAAATCCGTCTGCATCTGCCGCTCACAAATTCCCTTaGTGGTTGAAGACAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCIAQAGLELRNPSASAAHKFP*WLKTAF Trigger: AAAAGCTGTCTTCAACCACCAAGGGAATTTGTGAGC...GGCAGATGCAGACGGATTTCTGAGTTCGAGGCCAGCCTGGGCTATACAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221414.2 ENSMUST00000222457.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTGTATAGCCCAGGCTGGCCTCGAACTCAGAAATCCGTCTGCATCTGCCTCAATTCCCTTGGTGGTTaGAGACAGCTTTTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLYSPGWPRTQKSVCICLNSLGG*RQLFHF Trigger: AAAATGGAAAAGCTGTCTTCAACCACCAAGGGAATT...GAGGCAGATGCAGACGGATTTCTGAGTTCGAGGCCAGCCTGGGCTATACAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221414.2 ENSMUST00000222457.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGTTTGGTTTCTAACACCCAAATCAGGTGGCTGACAACCTCTTGTAGTTCTATAGAGGGGGCCGGCTaGTTTCTTCCCTGTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WSLVSNTQIRWLTTSCSSIEGAG*FLPCSG Trigger: ACCACTACAGGGAAGAAAGCAGCCGGCCCCCTCTAT...AGAACTACAAGAGGTTGTCAGCCACCTGATTTGGGTGTTAGAAACCAAACTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAAGGGACTGACTGTCGCTCACAAATTCCCTTaGTGGTTGAAGACAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKVSGLEAQQVPPKGLTVAHKFP*WLKTAF Trigger: AAAAGCTGTCTTCAACCACCAAGGGAATTTGTGAGC...GACAGTCAGTCCCTTGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| 3UTR CAA 72 bp | CTATACATTCGGCCGATACACAGATACCTAAGTAATTaGTGTGTTGCTGCCAGGGGAGGCCAGAAGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LYIRPIHRYLSN*CVAARGGQKST Trigger: TGTGGACTTCTGGCCTCCCCTGGCAGCAACACACAAATTACTTAGGTATCTGTGTATCGGCCGAATGTATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| 3UTR CAA 72 bp | AGGCCCCAGATACAAACAGTCTGCAACTGCTGGTCTTaGTATTGGCTTGTCCATTTTCTCAGGCAAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPQIQTVCNCWS*YWLVHFLRQAA Trigger: TGCTGCTTGCCTGAGAAAATGGACAAGCCAATACAAAGACCAGCAGTTGCAGACTGTTTGTATCTGGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
||
| CDS-3UTR GCA 90 bp | TTGTCTCCACAGATTTATAAAACTGCCCTCAGCTGTTCTTGTTTCTGTCACTCACCGTCCAAGATGGCCTaGAGCTCCTCACACAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPQIYKTALSCSCFCHSPSKMA*SSSHSA Trigger: AGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGG...TGAGTGACAGAAACAAGAACAGCTGAGGGCAGTTTTATAAATCTGTGGAGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTCCACAGATTTATAAAACTGCCCTCAGCTGTTCTTGTTTCTGTCACTCAGATAGAGGGGGCCGGCTaGTTTCTTCCCTGTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLHRFIKLPSAVLVSVTQIEGAG*FLPCSG Trigger: ACCACTACAGGGAAGAAAGCAGCCGGCCCCCTCTAT...CTGAGTGACAGAAACAAGAACAGCTGAGGGCAGTTTTATAAATCTGTGGAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR CCA 90 bp | AGAACTAAAACATTCTCTTCAAAGCACAGGGTTGGCAGTGTGGACCAGTGGTTGTTTCTTCCTCTTCCATaGAAGCTGGGCTGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTKTFSSKHRVGSVDQWLFLPLP*KLGCCS Trigger: AGAGCAGCAGCCCAGCTTCCATGGAAGAGGAAGAAA...CAACCACTGGTCCACACTGCCAACCCTGTGCTTTGAAGAGAATGTTTTAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR CCA 90 bp | ACATGTGCCACCACTGCCCGGCTCAGACAGCAACTTTTAGACACTGGTTTGTTCCACAAATTCCCTTGGTaGTTGAAGACAGCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TCATTARLRQQLLDTGLFHKFPW*LKTAFP Trigger: TGGAAAAGCTGTCTTCAACCACCAAGGGAATTTGTG...GAACAAACCAGTGTCTAAAAGTTGCTGTCTGAGCCGGGCAGTGGTGGCACATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221414.2 ENSMUST00000222457.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGGCTGACAACCTCTTGTAGTTCTAACTCCAAGGAGCCCACTCCCATTTACCATAAAAGAAGGCTGTaGGCCACGTGTGAAATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RWLTTSCSSNSKEPTPIYHKRRL*ATCEIE Trigger: CTCTATTTCACACGTGGCCCACAGCCTTCTTTTATG...GTAAATGGGAGTGGGCTCCTTGGAGTTAGAACTACAAGAGGTTGTCAGCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR TCA 90 bp | AAGACATGTGCCACCACTGCCCGGCTCAGACAGCAACTTTTAGACACTGGTTTGAATTCCCTTGGTGGTTaGAGACAGCTTTTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTCATTARLRQQLLDTGLNSLGG*RQLFHF Trigger: AAAATGGAAAAGCTGTCTTCAACCACCAAGGGAATT...CAAACCAGTGTCTAAAAGTTGCTGTCTGAGCCGGGCAGTGGTGGCACATGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221414.2 ENSMUST00000222457.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTCCACAGATTTATAAAACTGCCCTCAGCTGTTCTTGTTTCTGTCACTCAGACAGGTAGGTCAGGCTaGGGTTGCGATCTGCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLHRFIKLPSAVLVSVTQTGRSG*GCDLQY Trigger: ATACTGCAGATCGCAACCTCAGCCTGACCTACCTGT...CTGAGTGACAGAAACAAGAACAGCTGAGGGCAGTTTTATAAATCTGTGGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR GCA 90 bp | CAAAATAGAAATGGGAAACTCAGGTTGTCTCCACAGATTTATAAAACTGCCCTCCTGTCTCGAGCAGCATaGTCTCCAGCTGCAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNRNGKLRLSPQIYKTALLSRAA*SPAAAC Trigger: GCAAGCTGCAGCTGGAGAGCATGCTGCTCGAGACAG...GAGGGCAGTTTTATAAATCTGTGGAGACAACCTGAGTTTCCCATTTCTATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR CCA 90 bp | AGATACCTAAGTAATTTGTGTGTTGCTGCCAGGGGAGGCCAGAAGTCCACAGTGCACAAATTCCCTTGGTaGTTGAAGACAGCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RYLSNLCVAARGGQKSTVHKFPW*LKTAFP Trigger: TGGAAAAGCTGTCTTCAACCACCAAGGGAATTTGTG...CACTGTGGACTTCTGGCCTCCCCTGGCAGCAACACACAAATTACTTAGGTATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR GCA 90 bp | CACTGCCCGGCTCAGACAGCAACTTTTAGACACTGGTTTGTTCTATTATTATGTTGGAAGCTGGGCTGCTaGTCTCTAACTCAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HCPAQTATFRHWFVLLLCWKLGC*SLTQPS Trigger: AGAAGGTTGAGTTAGAGAGCAGCAGCCCAGCTTCCA...ACATAATAATAGAACAAACCAGTGTCTAAAAGTTGCTGTCTGAGCCGGGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222457.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTGCAACTGCTGGTCTTTGTATTGGCTTGTCCATTTTCTCAGGCAAGCAGCAATTCCCTTGGTGGTTaGAGACAGCTTTTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLQLLVFVLACPFSQASSNSLGG*RQLFHF Trigger: AAAATGGAAAAGCTGTCTTCAACCACCAAGGGAATT...GCTGCTTGCCTGAGAAAATGGACAAGCCAATACAAAGACCAGCAGTTGCAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAAGCACAGGGTTGGCAGTGTGGACCAGTGGTTGAATATTCAGCTTGTGAATTCCCTTGGTGGTTaGAGACAGCTTTTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKHRVGSVDQWLNIQLVNSLGG*RQLFHF Trigger: AAAATGGAAAAGCTGTCTTCAACCACCAAGGGAATT...CACAAGCTGAATATTCAACCACTGGTCCACACTGCCAACCCTGTGCTTTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTCGAGTCCCTTATCGTAGTCCAGATTTGTCTTTTCTTCCTCTTCCATGGAAGGTTTTCTTGGTGTTaGGATCCCAAGAGTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CFESLIVVQICLFFLFHGRFSWC*DPKSLC Trigger: GCAAAGACTCTTGGGATCGCAACACCAAGAAAACCT...TCCATGGAAGAGGAAGAAAAGACAAATCTGGACTACGATAAGGGACTCGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223079.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCACAGATTTATAAAACTGCCCTCAGCTGTTCTTGTTTCTGTCACTCAGTGAGGTTTTCTTGGTGTTaGGATCCCAAGAGTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPQIYKTALSCSCFCHSVRFSWC*DPKSLC Trigger: GCAAAGACTCTTGGGATCGCAACACCAAGAAAACCT...CACTGAGTGACAGAAACAAGAACAGCTGAGGGCAGTTTTATAAATCTGTGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCTTCGAGTCCCTTATCGTAGTCCAGATTTGTCTTTTCTTCCTCTTCCATTCAGGATTAAGTTATaGCAGTCAGCAGCATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLRVPYRSPDLSFLPLPFRIKL*QSAALS Trigger: GGACAATGCTGCTGACTGGCATAACTTAATCCTGAA...TGGAAGAGGAAGAAAAGACAAATCTGGACTACGATAAGGGACTCGAAGCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223079.2 |
||
| CDS-3UTR GCA 90 bp | TCTTGCATTTTATTCTGTCAGAATGCATGTATATCCCATGGTGTACACAATGTAATAGAGGGGGCCGGCTaGTTTCTTCCCTGTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SCILFCQNACISHGVHNVIEGAG*FLPCSG Trigger: ACCACTACAGGGAAGAAAGCAGCCGGCCCCCTCTAT...TACATTGTGTACACCATGGGATATACATGCATTCTGACAGAATAAAATGCAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221414.2 |
||
| CDS-3UTR GCA 90 bp | TACAAAATAGAAATGGGAAACTCAGGTTGTCTCCACAGATTTATAAAACTGCCCAGTATGGGCCAGCTCTaGGCCAATGGTGTGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YKIEMGNSGCLHRFIKLPSMGQL*ANGVLQ Trigger: TTGAAGCACACCATTGGCGCAGAGCTGGCCCATACT...GGGCAGTTTTATAAATCTGTGGAGACAACCTGAGTTTCCCATTTCTATTTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGAATGCATGTATATCCCATGGTGTACACAATGTAGTCAAACAGCAACTAGGTTTTCTTGGTGTTaGGATCCCAAGAGTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSECMYIPWCTQCSQTATRFSWC*DPKSLC Trigger: GCAAAGACTCTTGGGATCGCAACACCAAGAAAACCT...AGTTGCTGTTTGACTACATTGTGTACACCATGGGATATACATGCATTCTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222457.2 |
||
| CDS-3UTR CCA 90 bp | CACTGCCCGGCTCAGACAGCAACTTTTAGACACTGGTTTGTTCTATTATTATGTGCTCACAAATTCCCTTaGTGGTTGAAGACAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HCPAQTATFRHWFVLLLCAHKFP*WLKTAF Trigger: AAAAGCTGTCTTCAACCACCAAGGGAATTTGTGAGC...ACATAATAATAGAACAAACCAGTGTCTAAAAGTTGCTGTCTGAGCCGGGCAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221414.2 ENSMUST00000222457.2 |
||
| CDS-3UTR TCA 90 bp | TTATTCTGTCAGAATGCATGTATATCCCATGGTGTACACAATGTAGTCAAACAGCTTTACTCAGCAAGCTaGCTTTCAGGTTGGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LFCQNACISHGVHNVVKQLYSAS*LSGWQY Trigger: GTATTGCCAACCTGAAAGTCAGCTTGCTGAGTAAAG...CTGTTTGACTACATTGTGTACACCATGGGATATACATGCATTCTGACAGAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222457.2 |
||
| CDS-3UTR GCA 90 bp | GTACAAAATAGAAATGGGAAACTCAGGTTGTCTCCACAGATTTATAAAACTGCCAGGTTTTCTTGGTGTTaGGATCCCAAGAGTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQNRNGKLRLSPQIYKTARFSWC*DPKSLC Trigger: GCAAAGACTCTTGGGATCGCAACACCAAGAAAACCT...GGCAGTTTTATAAATCTGTGGAGACAACCTGAGTTTCCCATTTCTATTTTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR CCA 90 bp | AAAATAGAAATGGGAAACTCAGGTTGTCTCCACAGATTTATAAAACTGCCCTCACATAAAAGAAGGCTGTaGGCCACGTGTGAAATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KIEMGNSGCLHRFIKLPSHKRRL*ATCEIE Trigger: CTCTATTTCACACGTGGCCCACAGCCTTCTTTTATG...TGAGGGCAGTTTTATAAATCTGTGGAGACAACCTGAGTTTCCCATTTCTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR CCA 90 bp | TTATTCTGTCAGAATGCATGTATATCCCATGGTGTACACAATGTAGTCAAACAGCACAAATTCCCTTGGTaGTTGAAGACAGCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFCQNACISHGVHNVVKQHKFPW*LKTAFP Trigger: TGGAAAAGCTGTCTTCAACCACCAAGGGAATTTGTG...CTGTTTGACTACATTGTGTACACCATGGGATATACATGCATTCTGACAGAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221414.2 ENSMUST00000222457.2 |
||
| 3UTR CAA 72 bp | TGGCTTGTCCATTTTCTCAGGCAAGCAGCAGCAATTTaGGGTGATTTTCATTTCTGTGATACTAAACTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: WLVHFLRQAAAI*GDFHFCDTKLY Trigger: ATAGAGTTTAGTATCACAGAAATGAAAATCACCCAAAATTGCTGCTGCTTGCCTGAGAAAATGGACAAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043716.9 |
||
| CDS GCA 90 bp | GGGCCCGGTGACCTGTCTCGAGCAGCATGCTCTCCAGCTGCAGCTTaGTGTTGCTCTCTATGTAGGGCTGGTGCAGCCACATGGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GPGDLSRAACSPAAA*CCSLCRAGAATWTG Trigger: ACCTGTCCATGTGGCTGCACCAGCCCTACATAGAGAGCAACAGCAAGCTGCAGCTGGAGAGCATGCTGCTCGAGACAGGTCACCGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGCTCAGCAGTGCCTGTGTCTGGAGAGGCTGCAGCAGCGGGAAGAGTGGCTGTGGTGAAGCCCTaGTCACTGAGGCTGTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EDSSAVPVSGEAAAAGRVAVVKP*SLRLSH Trigger: ATGGGACAGCCTCAGTGACAAGGGCTTCACCACAGC...CACTCTTCCCGCTGCTGCAGCCTCTCCAGACACAGGCACTGCTGAGCTGTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS TCA 90 bp | ACAGGCACAACGGCACCCGCGCTTCTGACTCTTATGGCGCCTCTGTaGGCCTGGGCTTTCTTACTCATCAAGCCGTCCAAGATGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TGTTAPALLTLMAPL*AWAFLLIKPSKMAC Trigger: GCAGGCCATCTTGGACGGCTTGATGAGTAAGAAAGCCCAGGCTCACAGAGGCGCCATAAGAGTCAGAAGCGCGGGTGCCGTTGTGCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220607.2 |
||
| CDS-3UTR CAA 90 bp | CATGGACAGGTAGGTCAGGCTGAGGTTGCGATCTGCAGTATGGGCCAGCTCTGCGCTGTGGTGAAGCCCTaGTCACTGAGGCTGTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HGQVGQAEVAICSMGQLCAVVKP*SLRLSH Trigger: ATGGGACAGCCTCAGTGACAAGGGCTTCACCACAGC...GCAGAGCTGGCCCATACTGCAGATCGCAACCTCAGCCTGACCTACCTGTCCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
||
| CDS GCA 90 bp | CTGGTGCAGCCACATGGACAGGTAGGTCAGGCTGAGGTTGCGATCTaGAGTATGGGCCAGCTCTGCGCCAATGGTGTGCTTCAAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVQPHGQVGQAEVAI*SMGQLCANGVLQKE Trigger: CTCCTTTTGAAGCACACCATTGGCGCAGAGCTGGCCCATACTGCAGATCGCAACCTCAGCCTGACCTACCTGTCCATGTGGCTGCACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS CCA 90 bp | CTGTGCAGACCAGAACTGGGTGCTGGATCCCCAAGCCGTCCAAGATaGCCTGCAGCTCCTCACACAGTGCTTCGAGTCCCTTATCGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LCRPELGAGSPSRPR*PAAPHTVLRVPYRS Trigger: ACTACGATAAGGGACTCGAAGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGGCTTGGGGATCCAGCACCCAGTTCTGGTCTGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
||
| CDS-3UTR CAA 90 bp | GGACAGGTAGGTCAGGCTGAGGTTGCGATCTGCAGTATGGGCCAGCTCTGCGCCAAAAGGAGCTCCTTCTaGTATGCTTCAGAGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GQVGQAEVAICSMGQLCAKRSSF*YASESR Trigger: CCGGCTCTCTGAAGCATACAAGAAGGAGCTCCTTTT...GGCGCAGAGCTGGCCCATACTGCAGATCGCAACCTCAGCCTGACCTACCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
||
| CDS GCA 90 bp | CTGAGGTTGCGATCTGCAGTATGGGCCAGCTCTGCGCCAATGGTGTaGTTCAAAAGGAGCTCCTTCTTGTATGCTTCAGAGAGCCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRLRSAVWASSAPMV*FKRSSFLYASESRR Trigger: CCGCCGGCTCTCTGAAGCATACAAGAAGGAGCTCCTTTTGAAGCACACCATTGGCGCAGAGCTGGCCCATACTGCAGATCGCAACCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS CCA 90 bp | TGTATGCTTCAGAGAGCCGGCGGGAGACCTCATAAAAGAAGGCTGTaGGCCACGTGTGAAATAGAGGGGGCCGGCTGCTTTCTTCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CMLQRAGGRPHKRRL*ATCEIEGAGCFLPC Trigger: ACAGGGAAGAAAGCAGCCGGCCCCCTCTATTTCACACGTGGCCCACAGCCTTCTTTTATGAGGTCTCCCGCCGGCTCTCTGAAGCATACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS CCA 90 bp | TATGCTTCAGAGAGCCGGCGGGAGACCTCATCAAGCCGTCCAAGATaGCCTGCAGCTCCTCACACAGTGCTTCGAGTCCCTTATCGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: YASESRRETSSSRPR*PAAPHTVLRVPYRS Trigger: ACTACGATAAGGGACTCGAAGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGGCTTGATGAGGTCTCCCGCCGGCTCTCTGAAGCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
||
| CDS-3UTR CAA 90 bp | GTGATCCCAGGACCCTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAGCTGTGGTGAAGCCCTaGTCACTGAGGCTGTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VIPGPSKYLALRHNRFHPAVVKP*SLRLSH Trigger: ATGGGACAGCCTCAGTGACAAGGGCTTCACCACAGC...TGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAGGGTCCTGGGATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS CCA 90 bp | CGCCTCTGTGAGCCTGGGCTTTCTTACTCATCAAGCCGTCCAAGATaGCCTGCAGCTCCTCACACAGTGCTTCGAGTCCCTTATCGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: RLCEPGLSYSSSRPR*PAAPHTVLRVPYRS Trigger: ACTACGATAAGGGACTCGAAGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGGCTTGATGAGTAAGAAAGCCCAGGCTCACAGAGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220607.2 |
||
| CDS GCA 90 bp | CAGCTCTGCGCCAATGGTGTGCTTCAAAAGGAGCTCCTTCTTGTATaGTTCAGAGAGCCGGCGGGAGACCTCATAAAAGAAGGCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLCANGVLQKELLLV*FREPAGDLIKEGCG Trigger: CCCACAGCCTTCTTTTATGAGGTCTCCCGCCGGCTCTCTGAAGCATACAAGAAGGAGCTCCTTTTGAAGCACACCATTGGCGCAGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR CAA 90 bp | ACATGTGCCACCACTGCCCGGCTCAGACAGCAACTTTTAGACACTGGTTTGTTCGCTGTGGTGAAGCCCTaGTCACTGAGGCTGTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TCATTARLRQQLLDTGLFAVVKP*SLRLSH Trigger: ATGGGACAGCCTCAGTGACAAGGGCTTCACCACAGC...GAACAAACCAGTGTCTAAAAGTTGCTGTCTGAGCCGGGCAGTGGTGGCACATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222457.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCTATGCAGCAGCAGTGCTTTAGCTCCAAAGAGCCGGCGGAATCCCAATGGGCTGTGGTGAAGCCCTaGTCACTGAGGCTGTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FSMQQQCFSSKEPAESQWAVVKP*SLRLSH Trigger: ATGGGACAGCCTCAGTGACAAGGGCTTCACCACAGC...CCATTGGGATTCCGCCGGCTCTTTGGAGCTAAAGCACTGCTGCTGCATAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGTTGCTCTCTATGTAGGGCTGGTGCAGCCACATGGACAGGTAGGTCAGGCAAGCTGACTTTCAGGTaGGCAATACTGCTCGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CCCSLCRAGAATWTGRSGKLTFR*AILLAV Trigger: CACAGCGAGCAGTATTGCCAACCTGAAAGTCAGCTT...GCCTGACCTACCTGTCCATGTGGCTGCACCAGCCCTACATAGAGAGCAACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGACCCTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAAGGGAAAAAGGAGCTCCTTCTaGTATGCTTCAGAGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PRTLKVSGLEAQQVPPKGKRSSF*YASESR Trigger: CCGGCTCTCTGAAGCATACAAGAAGGAGCTCCTTTT...TCCCTTGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAGGGTCCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTTGCTGCCAGGGGAGGCCAGAAGTCCACAGTGCTCTCAACTGCTAACTAAGCTGACTTTCAGGTaGGCAATACTGCTCGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CVLLPGEARSPQCSQLLTKLTFR*AILLAV Trigger: CACAGCGAGCAGTATTGCCAACCTGAAAGTCAGCTT...AGTTAGCAGTTGAGAGCACTGTGGACTTCTGGCCTCCCCTGGCAGCAACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTGCAGCCACATGGACAGGTAGGTCAGGCTGAGGTTGCGATCTGCAGTATGATAAGACAGGTTTTCTaGGTGTTGCGATCCCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVQPHGQVGQAEVAICSMIRQVF*VLRSQE Trigger: CTCTTGGGATCGCAACACCAAGAAAACCTGTCTTAT...CATACTGCAGATCGCAACCTCAGCCTGACCTACCTGTCCATGTGGCTGCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGACCCTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAAGGGACAGCTCACAAATTCCCTaGGTGGTTGAAGACAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGPSKYLALRHNRFHPRDSSQIP*VVEDSF Trigger: AAAGCTGTCTTCAACCACCAAGGGAATTTGTGAGCT...GTCCCTTGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAGGGTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
||
| CDS-3UTR CAA 90 bp | ATAGCCCAGGCTGGCCTCGAACTCAGAAATCCGTCTGCATCTGCCTCCCAAGTGAGCTCACAAATTCCCTaGGTGGTTGAAGACAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IAQAGLELRNPSASASQVSSQIP*VVEDSF Trigger: AAAGCTGTCTTCAACCACCAAGGGAATTTGTGAGCT...CACTTGGGAGGCAGATGCAGACGGATTTCTGAGTTCGAGGCCAGCCTGGGCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221414.2 ENSMUST00000222457.2 |
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| CDS-3UTR CAA 90 bp | AGTCTCAGTCAGTTTTCTATGCAGCAGCAGTGCTTTAGCTCCAAAGAGCCGGCGAAGCTGACTTTCAGGTaGGCAATACTGCTCGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: SLSQFSMQQQCFSSKEPAKLTFR*AILLAV Trigger: CACAGCGAGCAGTATTGCCAACCTGAAAGTCAGCTT...CGCCGGCTCTTTGGAGCTAAAGCACTGCTGCTGCATAGAAAACTGACTGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
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| CDS-3UTR CAA 90 bp | TGCTTCGAGTCCCTTATCGTAGTCCAGATTTGTCTTTTCTTCCTCTTCCATGGAGCTGTGGTGAAGCCCTaGTCACTGAGGCTGTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: CFESLIVVQICLFFLFHGAVVKP*SLRLSH Trigger: ATGGGACAGCCTCAGTGACAAGGGCTTCACCACAGC...TCCATGGAAGAGGAAGAAAAGACAAATCTGGACTACGATAAGGGACTCGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223079.2 |
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| CDS-3UTR CAA 90 bp | CCAGGACCCTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAAGGGACAAATTCCCTTGGTGGTaGAAGACAGCTTTTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: PGPSKYLALRHNRFHPRDKFPWW*KTAFPF Trigger: AAATGGAAAAGCTGTCTTCAACCACCAAGGGAATTT...GTCCCTTGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAGGGTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS-3UTR CAA 90 bp | ACCCTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAAGGGACTGACTAGCTCACAAATTCCCTaGGTGGTTGAAGACAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: TLKVSGLEAQQVPPKGLTSSQIP*VVEDSF Trigger: AAAGCTGTCTTCAACCACCAAGGGAATTTGTGAGCT...AGTCAGTCCCTTGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS-3UTR CAA 90 bp | CTAACTCAACCTTCTCTTTACTCTAGTCACTGCCCATCTCGCGGCGTAGTAATGAAGCTGACTTTCAGGTaGGCAATACTGCTCGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LTQPSLYSSHCPSRGVVMKLTFR*AILLAV Trigger: CACAGCGAGCAGTATTGCCAACCTGAAAGTCAGCTT...CATTACTACGCCGCGAGATGGGCAGTGACTAGAGTAAAGAGAAGGTTGAGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223079.2 |
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| CDS-3UTR CAA 90 bp | TGTGTGTTGCTGCCAGGGGAGGCCAGAAGTCCACAGTGCTCTCAACTGCTAACTAAATTCCCTTGGTGGTaGAAGACAGCTTTTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: CVLLPGEARSPQCSQLLTKFPWW*KTAFPF Trigger: AAATGGAAAAGCTGTCTTCAACCACCAAGGGAATTT...AGTTAGCAGTTGAGAGCACTGTGGACTTCTGGCCTCCCCTGGCAGCAACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| CDS-3UTR CAA 90 bp | GATCCCAGGACCCTCAAAGTATCTGGCCTTGAGGCACAACAGGTTCCACCCAAGAAATTCCCTTGGTGGTaGAAGACAGCTTTTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: DPRTLKVSGLEAQQVPPKKFPWW*KTAFPF Trigger: AAATGGAAAAGCTGTCTTCAACCACCAAGGGAATTT...CTTGGGTGGAACCTGTTGTGCCTCAAGGCCAGATACTTTGAGGGTCCTGGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS-3UTR CAA 90 bp | TTAAAGACATGTGCCACCACTGCCCGGCTCAGACAGCAACTTTTAGACACTGGTATAAGACAGGTTTTCTaGGTGTTGCGATCCCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: LKTCATTARLRQQLLDTGIRQVF*VLRSQE Trigger: CTCTTGGGATCGCAACACCAAGAAAACCTGTCTTAT...ACCAGTGTCTAAAAGTTGCTGTCTGAGCCGGGCAGTGGTGGCACATGTCTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222457.2 |
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| CDS-3UTR CAA 90 bp | AGAACTAAAACATTCTCTTCAAAGCACAGGGTTGGCAGTGTGGACCAGTGGTTGAAGCTGACTTTCAGGTaGGCAATACTGCTCGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: RTKTFSSKHRVGSVDQWLKLTFR*AILLAV Trigger: CACAGCGAGCAGTATTGCCAACCTGAAAGTCAGCTT...CAACCACTGGTCCACACTGCCAACCCTGTGCTTTGAAGAGAATGTTTTAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| CDS-3UTR CAA 90 bp | CCGATACACAGATACCTAAGTAATTTGTGTGTTGCTGCCAGGGGAGGCCAGAAGAGCTCACAAATTCCCTaGGTGGTTGAAGACAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: PIHRYLSNLCVAARGGQKSSQIP*VVEDSF Trigger: AAAGCTGTCTTCAACCACCAAGGGAATTTGTGAGCT...CTTCTGGCCTCCCCTGGCAGCAACACACAAATTACTTAGGTATCTGTGTATCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| CDS-3UTR CAA 90 bp | CTAACTCAACCTTCTCTTTACTCTAGTCACTGCCCATCTCGCGGCGTAGTAATGATAAGACAGGTTTTCTaGGTGTTGCGATCCCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: LTQPSLYSSHCPSRGVVMIRQVF*VLRSQE Trigger: CTCTTGGGATCGCAACACCAAGAAAACCTGTCTTAT...CATTACTACGCCGCGAGATGGGCAGTGACTAGAGTAAAGAGAAGGTTGAGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223079.2 |
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| CDS-3UTR CAA 90 bp | AAGACATGTGCCACCACTGCCCGGCTCAGACAGCAACTTTTAGACACTGGTTTGAAATTCCCTTGGTGGTaGAAGACAGCTTTTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: KTCATTARLRQQLLDTGLKFPWW*KTAFPF Trigger: AAATGGAAAAGCTGTCTTCAACCACCAAGGGAATTT...CAAACCAGTGTCTAAAAGTTGCTGTCTGAGCCGGGCAGTGGTGGCACATGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221414.2 ENSMUST00000222457.2 |
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| CDS-3UTR CAA 90 bp | TGTCTCCACAGATTTATAAAACTGCCCTCAGCTGTTCTTGTTTCTGTCACTCAGAAAAGGAGCTCCTTCTaGTATGCTTCAGAGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: CLHRFIKLPSAVLVSVTQKRSSF*YASESR Trigger: CCGGCTCTCTGAAGCATACAAGAAGGAGCTCCTTTT...CTGAGTGACAGAAACAAGAACAGCTGAGGGCAGTTTTATAAATCTGTGGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS-3UTR CAA 90 bp | TGGAGTTTGGTTTCTAACACCCAAATCAGGTGGCTGACAACCTCTTGTAGTTCTATAAGACAGGTTTTCTaGGTGTTGCGATCCCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: WSLVSNTQIRWLTTSCSSIRQVF*VLRSQE Trigger: CTCTTGGGATCGCAACACCAAGAAAACCTGTCTTAT...AGAACTACAAGAGGTTGTCAGCCACCTGATTTGGGTGTTAGAAACCAAACTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| CDS-3UTR CAA 90 bp | CTGTCAGAATGCATGTATATCCCATGGTGTACACAATGTAGTCAAACAGCAACTAAGCTGACTTTCAGGTaGGCAATACTGCTCGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LSECMYIPWCTQCSQTATKLTFR*AILLAV Trigger: CACAGCGAGCAGTATTGCCAACCTGAAAGTCAGCTT...AGTTGCTGTTTGACTACATTGTGTACACCATGGGATATACATGCATTCTGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222457.2 |
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| CDS-3UTR CAA 90 bp | CACTGCCCGGCTCAGACAGCAACTTTTAGACACTGGTTTGTTCTATTATTATGTAGCTCACAAATTCCCTaGGTGGTTGAAGACAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: HCPAQTATFRHWFVLLLCSSQIP*VVEDSF Trigger: AAAGCTGTCTTCAACCACCAAGGGAATTTGTGAGCT...ACATAATAATAGAACAAACCAGTGTCTAAAAGTTGCTGTCTGAGCCGGGCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221414.2 ENSMUST00000222457.2 |
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| CDS-3UTR CAA 90 bp | GTACAAAATAGAAATGGGAAACTCAGGTTGTCTCCACAGATTTATAAAACTGCCATAAGACAGGTTTTCTaGGTGTTGCGATCCCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: VQNRNGKLRLSPQIYKTAIRQVF*VLRSQE Trigger: CTCTTGGGATCGCAACACCAAGAAAACCTGTCTTAT...GGCAGTTTTATAAATCTGTGGAGACAACCTGAGTTTCCCATTTCTATTTTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 |
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| CDS-3UTR CAA 90 bp | CTGTCAGAATGCATGTATATCCCATGGTGTACACAATGTAGTCAAACAGCAACTAAATTCCCTTGGTGGTaGAAGACAGCTTTTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: LSECMYIPWCTQCSQTATKFPWW*KTAFPF Trigger: AAATGGAAAAGCTGTCTTCAACCACCAAGGGAATTT...AGTTGCTGTTTGACTACATTGTGTACACCATGGGATATACATGCATTCTGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221414.2 ENSMUST00000222457.2 |
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| CDS CCA 72 bp | GAGAGCCGGCGGGAGACCTCATCAAGCCGTCCAAGATaGCCTGCAGCTCCTCACACAGTGCTTCGAGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: ESRRETSSSRPR*PAAPHTVLRVP Trigger: AGGGACTCGAAGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGGCTTGATGAGGTCTCCCGCCGGCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
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| CDS GCA 72 bp | CCGGCGGGAGACCTCATCAAGCCGTCCAAGATGGCCTaGAGCTCCTCACACAGTGCTTCGAGTCCCTTATCG | + |
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Preference number: 6 (lower is better) Translates to: PAGDLIKPSKMA*SSSHSASSPLS Trigger: CGATAAGGGACTCGAAGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGGCTTGATGAGGTCTCCCGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221102.2 |
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| CDS CCA 72 bp | CCAGAACTGGGTGCTGGATCCCCAAGCCGTCCAAGATaGCCTGCAGCTCCTCACACAGTGCTTCGAGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: PELGAGSPSRPR*PAAPHTVLRVP Trigger: AGGGACTCGAAGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGGCTTGGGGATCCAGCACCCAGTTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
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| CDS GCA 72 bp | ACTGGGTGCTGGATCCCCAAGCCGTCCAAGATGGCCTaGAGCTCCTCACACAGTGCTTCGAGTCCCTTATCG | + |
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Preference number: 6 (lower is better) Translates to: TGCWIPKPSKMA*SSSHSASSPLS Trigger: CGATAAGGGACTCGAAGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGGCTTGGGGATCCAGCACCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
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| CDS CCA 72 bp | CAGAGAGCCGGCGGGAGACCTCATAAAAGAAGGCTGTaGGCCACGTGTGAAATAGAGGGGGCCGGCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: QRAGGRPHKRRL*ATCEIEGAGCF Trigger: AAAGCAGCCGGCCCCCTCTATTTCACACGTGGCCCACAGCCTTCTTTTATGAGGTCTCCCGCCGGCTCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS CCA 72 bp | TTATGTGTGGGTGCTGTGCAGACCAGAACTGGGTGCTaGATCCCCAAGCCGTCCAAGATGGCCTGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LCVGAVQTRTGC*IPKPSKMACSS Trigger: GGAGCTGCAGGCCATCTTGGACGGCTTGGGGATCCAGCACCCAGTTCTGGTCTGCACAGCACCCACACATAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
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| CDS TCA 72 bp | ACGGCACCCGCGCTTCTGACTCTTATGGCGCCTCTGTaGGCCTGGGCTTTCTTACTCATCAAGCCGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: TAPALLTLMAPL*AWAFLLIKPSK Trigger: CTTGGACGGCTTGATGAGTAAGAAAGCCCAGGCTCACAGAGGCGCCATAAGAGTCAGAAGCGCGGGTGCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220607.2 |
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| CDS GCA 72 bp | CCACATGGACAGGTAGGTCAGGCTGAGGTTGCGATCTaGAGTATGGGCCAGCTCTGCGCCAATGGTGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PHGQVGQAEVAI*SMGQLCANGVL Trigger: AAGCACACCATTGGCGCAGAGCTGGCCCATACTGCAGATCGCAACCTCAGCCTGACCTACCTGTCCATGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS GCA 72 bp | GACCTGTCTCGAGCAGCATGCTCTCCAGCTGCAGCTTaGTGTTGCTCTCTATGTAGGGCTGGTGCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: DLSRAACSPAAA*CCSLCRAGAAT Trigger: TGTGGCTGCACCAGCCCTACATAGAGAGCAACAGCAAGCTGCAGCTGGAGAGCATGCTGCTCGAGACAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS GCA 72 bp | TACTTATGTGTGGGTGCTGTGCAGACCAGAACTGGGTaGTGGATCCCCAAGCCGTCCAAGATGGCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: YLCVGAVQTRTG*WIPKPSKMACS Trigger: GCTGCAGGCCATCTTGGACGGCTTGGGGATCCAGCACCCAGTTCTGGTCTGCACAGCACCCACACATAAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223170.2 |
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| CDS CCA 72 bp | GAGCCTGGGCTTTCTTACTCATCAAGCCGTCCAAGATaGCCTGCAGCTCCTCACACAGTGCTTCGAGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: EPGLSYSSSRPR*PAAPHTVLRVP Trigger: AGGGACTCGAAGCACTGTGTGAGGAGCTGCAGGCCATCTTGGACGGCTTGATGAGTAAGAAAGCCCAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220607.2 |
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| CDS GCA 72 bp | CAGGCTGAGGTTGCGATCTGCAGTATGGGCCAGCTCTaGGCCAATGGTGTGCTTCAAAAGGAGCTCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: QAEVAICSMGQL*ANGVLQKELLL Trigger: AAGAAGGAGCTCCTTTTGAAGCACACCATTGGCGCAGAGCTGGCCCATACTGCAGATCGCAACCTCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS CAA 72 bp | GGTTCGGGGTCTTCCCTCAGCAAGCTGACTTTCAGGTaGGCAATACTGCTCGCTGTGGTGAAGCCCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GSGSSLSKLTFR*AILLAVVKPLS Trigger: TGACAAGGGCTTCACCACAGCGAGCAGTATTGCCAACCTGAAAGTCAGCTTGCTGAGGGAAGACCCCGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223079.2 |
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| CDS GCA 72 bp | CGATCTGCAGTATGGGCCAGCTCTGCGCCAATGGTGTaGTTCAAAAGGAGCTCCTTCTTGTATGCTTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RSAVWASSAPMV*FKRSSFLYASE Trigger: CTCTGAAGCATACAAGAAGGAGCTCCTTTTGAAGCACACCATTGGCGCAGAGCTGGCCCATACTGCAGATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS CCA 72 bp | GGTTGCGATCTGCAGTATGGGCCAGCTCTGCGCCAATaGTGTGCTTCAAAAGGAGCTCCTTCTTGTATGCTT | + |
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Preference number: 6 (lower is better) Translates to: GCDLQYGPALRQ*CASKGAPSCML Trigger: AAGCATACAAGAAGGAGCTCCTTTTGAAGCACACCATTGGCGCAGAGCTGGCCCATACTGCAGATCGCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS GCA 72 bp | GCCAATGGTGTGCTTCAAAAGGAGCTCCTTCTTGTATaGTTCAGAGAGCCGGCGGGAGACCTCATAAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: ANGVLQKELLLV*FREPAGDLIKE Trigger: TTCTTTTATGAGGTCTCCCGCCGGCTCTCTGAAGCATACAAGAAGGAGCTCCTTTTGAAGCACACCATTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221182.2 |
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| CDS GCA 72 bp | GATTTGTCTTTTCTTCCTCTTCCATGGAAGCTGGGCTaGTGCTCTCTAACTCAACCTTCTCTTTACTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: DLSFLPLPWKLG*CSLTQPSLYSA Trigger: TGCTGAGTAAAGAGAAGGTTGAGTTAGAGAGCAGCAGCCCAGCTTCCATGGAAGAGGAAGAAAAGACAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221102.2 ENSMUST00000222457.2 ENSMUST00000223170.2 |
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| CDS CAA 90 bp | CTGAGGCTGTCCCATTTCAGGATTAAGTTATGCCAGTCAGCAGCATaGTCCTTAAGTTTCCTCGCACTGACTGATAAGACAGGTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LRLSHFRIKLCQSAA*SLSFLALTDKTGFL Trigger: AAGAAAACCTGTCTTATCAGTCAGTGCGAGGAAACTTAAGGACAATGCTGCTGACTGGCATAACTTAATCCTGAAATGGGACAGCCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221102.2 ENSMUST00000222457.2 ENSMUST00000223079.2 ENSMUST00000223170.2 |
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| CDS CAA 72 bp | TCCCATTTCAGGATTAAGTTATGCCAGTCAGCAGCATaGTCCTTAAGTTTCCTCGCACTGACTGATAAGACA | + |
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Preference number: 6 (lower is better) Translates to: SHFRIKLCQSAA*SLSFLALTDKT Trigger: TGTCTTATCAGTCAGTGCGAGGAAACTTAAGGACAATGCTGCTGACTGGCATAACTTAATCCTGAAATGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043716.9 ENSMUST00000220607.2 ENSMUST00000221102.2 ENSMUST00000222457.2 ENSMUST00000223079.2 ENSMUST00000223170.2 |
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