RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CILP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042254

Ensembl transcript IDs: ENSMUST00000048762.8, ENSMUST00000141382.2

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCGTGGACCACCTGGCCAGTGCTGCCCGCAGGCATCCAGTCAGTaGTCCGGGCCTCTAGCCGCAGGGGACGGGCACACACACGCTCCC +
Preference number: 1 (lower is better)
Translates to: CRGPPGQCCPQASSQ*SGPLAAGDGHTHAP
Trigger: GGGAGCGTGTGTGTGCCCGTCCCCTGCGGCTAGAGGCCCGGACCACTGACTGGATGCCTGCGGGCAGCACTGGCCAGGTGGTCCACGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp ACCAGAAGCCCTCACGGGGACTGCCGTGGACCACCTGGCCAGTGCTaGCCGCAGGCATCCAGTCAGTGGTCCGGGCCTCTAGCCGCAGGG +
Preference number: 1 (lower is better)
Translates to: TRSPHGDCRGPPGQC*PQASSQWSGPLAAG
Trigger: CCCTGCGGCTAGAGGCCCGGACCACTGACTGGATGCCTGCGGGCAGCACTGGCCAGGTGGTCCACGGCAGTCCCCGTGAGGGCTTCTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp GGCACCAGAAGCCCTCACGGGGACTGCCGTGGACCACCTGGCCAGTaGTGCCCGCAGGCATCCAGTCAGTGGTCCGGGCCTCTAGCCGCA +
Preference number: 1 (lower is better)
Translates to: GTRSPHGDCRGPPGQ*CPQASSQWSGPLAA
Trigger: TGCGGCTAGAGGCCCGGACCACTGACTGGATGCCTGCGGGCAGCACTGGCCAGGTGGTCCACGGCAGTCCCCGTGAGGGCTTCTGGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp CTGTTGAGGCACCAGAAGCCCTCACGGGGACTGCCGTGGACCACCTaGCCAGTGCTGCCCGCAGGCATCCAGTCAGTGGTCCGGGCCTCT +
Preference number: 1 (lower is better)
Translates to: LLRHQKPSRGLPWTT*PVLPAGIQSVVRAS
Trigger: AGAGGCCCGGACCACTGACTGGATGCCTGCGGGCAGCACTGGCCAGGTGGTCCACGGCAGTCCCCGTGAGGGCTTCTGGTGCCTCAACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp CTCTGCTCCCTGTTGAGGCACCAGAAGCCCTCACGGGGACTGCCGTaGACCACCTGGCCAGTGCTGCCCGCAGGCATCCAGTCAGTGGTC +
Preference number: 1 (lower is better)
Translates to: LCSLLRHQKPSRGLP*TTWPVLPAGIQSVV
Trigger: GACCACTGACTGGATGCCTGCGGGCAGCACTGGCCAGGTGGTCCACGGCAGTCCCCGTGAGGGCTTCTGGTGCCTCAACAGGGAGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp CCTCGGTCGCCTCACTGCACAGTGACACTGTCTGTGCCAAGCAGGTaGGGGTACGGGTCTGCACCCCAGTGTGACCGCAGGCAGCTGAGC +
Preference number: 1 (lower is better)
Translates to: PRSPHCTVTLSVPSR*GYGSAPQCDRRQLS
Trigger: GCTCAGCTGCCTGCGGTCACACTGGGGTGCAGACCCGTACCCGCACCTGCTTGGCACAGACAGTGTCACTGTGCAGTGAGGCGACCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp TGCAGGCCTGGCTCATGCAGAGCTGGCCCTCCTCGGTCGCCTCACTaGACAGTGACACTGTCTGTGCCAAGCAGGTGCGGGTACGGGTCT +
Preference number: 1 (lower is better)
Translates to: CRPGSCRAGPPRSPH*TVTLSVPSRCGYGS
Trigger: AGACCCGTACCCGCACCTGCTTGGCACAGACAGTGTCACTGTGCAGTGAGGCGACCGAGGAGGGCCAGCTCTGCATGAGCCAGGCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp CTCGGCCCCGGACGATGCTCCGTGTCTCTGCGCATCGTTGGCAGCTaGACTCCACAGCCACCTTGGTGGGCAGTGTGTACCCACTGCACT +
Preference number: 1 (lower is better)
Translates to: LGPGRCSVSLRIVGS*TPQPPWWAVCTHCT
Trigger: AGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAGCATCGTCCGGGGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp GTTGTCAGCAGCAGTGACTCGGCCCCGGACGATGCTCCGTGTCTCTaGGCATCGTTGGCAGCTGCACTCCACAGCCACCTTGGTGGGCAG +
Preference number: 1 (lower is better)
Translates to: VVSSSDSAPDDAPCL*ASLAAALHSHLGGQ
Trigger: CTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAGCATCGTCCGGGGCCGAGTCACTGCTGCTGACAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp GGGCAGGTCAGGTCACAAGCTGTGCAGGCCTGGCTCATGCAGAGCTaGCCCTCCTCGGTCGCCTCACTGCACAGTGACACTGTCTGTGCC +
Preference number: 1 (lower is better)
Translates to: GQVRSQAVQAWLMQS*PSSVASLHSDTVCA
Trigger: GGCACAGACAGTGTCACTGTGCAGTGAGGCGACCGAGGAGGGCCAGCTCTGCATGAGCCAGGCCTGCACAGCTTGTGACCTGACCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp GGTCAGCATCTTTGGTGCCTTGGCCAGCAGGTAGACAGCGGCTCCTaGAGCTGGGCCACCTCCAGGGAGGGAGATGGCCCCGTGAAGCAT +
Preference number: 1 (lower is better)
Translates to: GQHLWCLGQQVDSGS*SWATSREGDGPVKH
Trigger: ATGCTTCACGGGGCCATCTCCCTCCCTGGAGGTGGCCCAGCTCCAGGAGCCGCTGTCTACCTGCTGGCCAAGGCACCAAAGATGCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp GGAACCTCCCGCTGCTGTCTGTTCGGGTCAGCATCTTTGGTGCCTTaGCCAGCAGGTAGACAGCGGCTCCTGGAGCTGGGCCACCTCCAG +
Preference number: 1 (lower is better)
Translates to: GTSRCCLFGSASLVP*PAGRQRLLELGHLQ
Trigger: CTGGAGGTGGCCCAGCTCCAGGAGCCGCTGTCTACCTGCTGGCCAAGGCACCAAAGATGCTGACCCGAACAGACAGCAGCGGGAGGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp GCAGTGACTCGGCCCCGGACGATGCTCCGTGTCTCTGCGCATCGTTaGCAGCTGCACTCCACAGCCACCTTGGTGGGCAGTGTGTACCCA +
Preference number: 1 (lower is better)
Translates to: AVTRPRTMLRVSAHR*QLHSTATLVGSVYP
Trigger: TGGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAGCATCGTCCGGGGCCGAGTCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 90 bp ACTGTCTGTGCCAAGCAGGTGCGGGTACGGGTCTGCACCCCAGTGTaGCCGCAGGCAGCTGAGCACTTGCTCCAGGGAGACCAGGAACTC +
Preference number: 1 (lower is better)
Translates to: TVCAKQVRVRVCTPV*PQAAEHLLQGDQEL
Trigger: GAGTTCCTGGTCTCCCTGGAGCAAGTGCTCAGCTGCCTGCGGTCACACTGGGGTGCAGACCCGTACCCGCACCTGCTTGGCACAGACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp CCCATGCTTCCACGCCGGCGTAGGCCACCCCTGCTTGCCCGTTGTTaGCTCATGGCTGGTACTCTTCCTTGGACAGTGCCTGTAGCTGGG +
Preference number: 1 (lower is better)
Translates to: PMLPRRRRPPLLARC*LMAGTLPWTVPVAG
Trigger: CCCAGCTACAGGCACTGTCCAAGGAAGAGTACCAGCCATGAGGCAACAACGGGCAAGCAGGGGTGGCCTACGCCGGCGTGGAAGCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp CAGGCAGCTGAGCACTTGCTCCAGGGAGACCAGGAACTCCAGATGTaGTCTGCATCTCCTCGCAAGGACCCTGGTGGGCAGAGGAAGCGC +
Preference number: 1 (lower is better)
Translates to: QAAEHLLQGDQELQM*SASPRKDPGGQRKR
Trigger: GCGCTTCCTCTGCCCACCAGGGTCCTTGCGAGGAGATGCAGAGCACATCTGGAGTTCCTGGTCTCCCTGGAGCAAGTGCTCAGCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp GGGTACGGGTCTGCACCCCAGTGTGACCGCAGGCAGCTGAGCACTTaGTCCAGGGAGACCAGGAACTCCAGATGTGCTCTGCATCTCCTC +
Preference number: 1 (lower is better)
Translates to: GYGSAPQCDRRQLST*SRETRNSRCALHLL
Trigger: GAGGAGATGCAGAGCACATCTGGAGTTCCTGGTCTCCCTGGAGCAAGTGCTCAGCTGCCTGCGGTCACACTGGGGTGCAGACCCGTACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp CCACCCCTGCTTGCCCGTTGTTGCCTCATGGCTGGTACTCTTCCTTaGACAGTGCCTGTAGCTGGGGACCTGGCCGGTGTGCTTTGGAGG +
Preference number: 1 (lower is better)
Translates to: PPLLARCCLMAGTLP*TVPVAGDLAGVLWR
Trigger: CCTCCAAAGCACACCGGCCAGGTCCCCAGCTACAGGCACTGTCCAAGGAAGAGTACCAGCCATGAGGCAACAACGGGCAAGCAGGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp AAATCTCAGAGGGGCCCATGCTTCCACGCCGGCGTAGGCCACCCCTaGTTGCCCGTTGTTGCCTCATGGCTGGTACTCTTCCTTGGACAG +
Preference number: 1 (lower is better)
Translates to: KSQRGPCFHAGVGHP*LPVVASWLVLFLGQ
Trigger: CTGTCCAAGGAAGAGTACCAGCCATGAGGCAACAACGGGCAAGCAGGGGTGGCCTACGCCGGCGTGGAAGCATGGGCCCCTCTGAGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp CTTCCTTGGACAGTGCCTGTAGCTGGGGACCTGGCCGGTGTGCTTTaGAGGTACTGGAAGGCACTCTGGCGGCCTACCTGCCTTTCTGCA +
Preference number: 1 (lower is better)
Translates to: LPWTVPVAGDLAGVL*RYWKALWRPTCLSA
Trigger: TGCAGAAAGGCAGGTAGGCCGCCAGAGTGCCTTCCAGTACCTCCAAAGCACACCGGCCAGGTCCCCAGCTACAGGCACTGTCCAAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 90 bp CATCTCGGCACCGGATCCCATTGTCCTGCTGCCCTGCACAGGTCTTaGTCGGGCAGCGGCCTACGTCGTAGTAGAAGGAATTGCTGGCGT +
Preference number: 1 (lower is better)
Translates to: HLGTGSHCPAALHRS*SGSGLRRSRRNCWR
Trigger: ACGCCAGCAATTCCTTCTACTACGACGTAGGCCGCTGCCCGATCAAGACCTGTGCAGGGCAGCAGGACAATGGGATCCGGTGCCGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp GTTCTCCACAGCATCTCGGCACCGGATCCCATTGTCCTGCTGCCCTaGACAGGTCTTGATCGGGCAGCGGCCTACGTCGTAGTAGAAGGA +
Preference number: 1 (lower is better)
Translates to: VLHSISAPDPIVLLP*TGLDRAAAYVVVEG
Trigger: TCCTTCTACTACGACGTAGGCCGCTGCCCGATCAAGACCTGTGCAGGGCAGCAGGACAATGGGATCCGGTGCCGAGATGCTGTGGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp TCACATCCCGGATCCCATAGAGCTTCCCCACAGTCTGCCGGTGGGTaGCTCCCATGTTACGGGATCGTACATTCACCTCCAGTGGCCCCA +
Preference number: 1 (lower is better)
Translates to: SHPGSHRASPQSAGG*LPCYGIVHSPPVAP
Trigger: TGGGGCCACTGGAGGTGAATGTACGATCCCGTAACATGGGAGGCACCCACCGGCAGACTGTGGGGAAGCTCTATGGGATCCGGGATGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp TCCGTGTCTCTGCGCATCGTTGGCAGCTGCACTCCACAGCCACCTTaGTGGGCAGTGTGTACCCACTGCACTGGATCTCCCTCTCTTCTG +
Preference number: 1 (lower is better)
Translates to: SVSLRIVGSCTPQPP*WAVCTHCTGSPSLL
Trigger: CAGAAGAGAGGGAGATCCAGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp GCTGGGGACCTGGCCGGTGTGCTTTGGAGGTACTGGAAGGCACTCTaGCGGCCTACCTGCCTTTCTGCACAGTTAAAGGTCAGGGCAACT +
Preference number: 1 (lower is better)
Translates to: AGDLAGVLWRYWKAL*RPTCLSAQLKVRAT
Trigger: AGTTGCCCTGACCTTTAACTGTGCAGAAAGGCAGGTAGGCCGCCAGAGTGCCTTCCAGTACCTCCAAAGCACACCGGCCAGGTCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp GGCAGCTGCACTCCACAGCCACCTTGGTGGGCAGTGTGTACCCACTaGACTGGATCTCCCTCTCTTCTGTTCTGGAAATGCCGCAGCAGT +
Preference number: 1 (lower is better)
Translates to: GSCTPQPPWWAVCTH*TGSPSLLFWKCRSS
Trigger: ACTGCTGCGGCATTTCCAGAACAGAAGAGAGGGAGATCCAGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp AGTCCTGGCACATGCAGGCATCACAGTCAGCATTTACCTGGCCCATaGGGCAGGTCAGGTCACAAGCTGTGCAGGCCTGGCTCATGCAGA +
Preference number: 1 (lower is better)
Translates to: SPGTCRHHSQHLPGP*GRSGHKLCRPGSCR
Trigger: TCTGCATGAGCCAGGCCTGCACAGCTTGTGACCTGACCTGCCCCATGGGCCAGGTAAATGCTGACTGTGATGCCTGCATGTGCCAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp GTGTCTCTGCGCATCGTTGGCAGCTGCACTCCACAGCCACCTTGGTaGGCAGTGTGTACCCACTGCACTGGATCTCCCTCTCTTCTGTTC +
Preference number: 1 (lower is better)
Translates to: VSLRIVGSCTPQPPW*AVCTHCTGSPSLLF
Trigger: GAACAGAAGAGAGGGAGATCCAGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp ACAGTGCCTGTAGCTGGGGACCTGGCCGGTGTGCTTTGGAGGTACTaGAAGGCACTCTGGCGGCCTACCTGCCTTTCTGCACAGTTAAAG +
Preference number: 1 (lower is better)
Translates to: TVPVAGDLAGVLWRY*KALWRPTCLSAQLK
Trigger: CTTTAACTGTGCAGAAAGGCAGGTAGGCCGCCAGAGTGCCTTCCAGTACCTCCAAAGCACACCGGCCAGGTCCCCAGCTACAGGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp GCCGGTGTGCTTTGGAGGTACTGGAAGGCACTCTGGCGGCCTACCTaGCTTTCTGCACAGTTAAAGGTCAGGGCAACTCCCACATTGCTC +
Preference number: 1 (lower is better)
Translates to: AGVLWRYWKALWRPT*LSAQLKVRATPTLL
Trigger: GAGCAATGTGGGAGTTGCCCTGACCTTTAACTGTGCAGAAAGGCAGGTAGGCCGCCAGAGTGCCTTCCAGTACCTCCAAAGCACACCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp CCAGGAACTCCAGATGTGCTCTGCATCTCCTCGCAAGGACCCTGGTaGGCAGAGGAAGCGCACGGTATAATTGGAACAGTTCTGGCCTGG +
Preference number: 1 (lower is better)
Translates to: PGTPDVLCISSQGPW*AEEAHGIIGTVLAW
Trigger: CCAGGCCAGAACTGTTCCAATTATACCGTGCGCTTCCTCTGCCCACCAGGGTCCTTGCGAGGAGATGCAGAGCACATCTGGAGTTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp TGGGCAGTGTGTACCCACTGCACTGGATCTCCCTCTCTTCTGTTCTaGAAATGCCGCAGCAGTTCTCCACAGCATCTCGGCACCGGATCC +
Preference number: 1 (lower is better)
Translates to: WAVCTHCTGSPSLLF*KCRSSSPQHLGTGS
Trigger: GGATCCGGTGCCGAGATGCTGTGGAGAACTGCTGCGGCATTTCCAGAACAGAAGAGAGGGAGATCCAGTGCAGTGGGTACACACTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp CTGCACTCCACAGCCACCTTGGTGGGCAGTGTGTACCCACTGCACTaGATCTCCCTCTCTTCTGTTCTGGAAATGCCGCAGCAGTTCTCC +
Preference number: 1 (lower is better)
Translates to: LHSTATLVGSVYPLH*ISLSSVLEMPQQFS
Trigger: GGAGAACTGCTGCGGCATTTCCAGAACAGAAGAGAGGGAGATCCAGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp CATAGCGATCCCCCTCGATCTGATAGAACCGGAAGTGAGCTGCACTaGGGGGTGCCTCCTCACACGCCCGAAGGTTCTCAAAGGCATAGA +
Preference number: 1 (lower is better)
Translates to: HSDPPRSDRTGSELH*GVPPHTPEGSQRHR
Trigger: TCTATGCCTTTGAGAACCTTCGGGCGTGTGAGGAGGCACCCCCCAGTGCAGCTCACTTCCGGTTCTATCAGATCGAGGGGGATCGCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp TTGTTGCCTCATGGCTGGTACTCTTCCTTGGACAGTGCCTGTAGCTaGGGACCTGGCCGGTGTGCTTTGGAGGTACTGGAAGGCACTCTG +
Preference number: 1 (lower is better)
Translates to: LLPHGWYSSLDSACS*GPGRCALEVLEGTL
Trigger: CAGAGTGCCTTCCAGTACCTCCAAAGCACACCGGCCAGGTCCCCAGCTACAGGCACTGTCCAAGGAAGAGTACCAGCCATGAGGCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 90 bp ACAGTGAGCTGGGTGACCTTGGACTTCACAGCCCCAGCATCACTCTaGGCCTTACAGAAGTACTCCCCTGCTTGGTCCTGCTGCAGGTTC +
Preference number: 1 (lower is better)
Translates to: TVSWVTLDFTAPASL*ALQKYSPAWSCCRF
Trigger: GAACCTGCAGCAGGACCAAGCAGGGGAGTACTTCTGTAAGGCTCAGAGTGATGCTGGGGCTGTGAAGTCCAAGGTCACCCAGCTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp TGTGGTACCAGAAGTACTTGTCCGGACTGGGTTTCCCCGTGGCTTTaGAGCACAGAGACACACTCTGCCCAGCCCGACGTGCTTTCATCT +
Preference number: 1 (lower is better)
Translates to: CGTRSTCPDWVSPWL*STETHSAQPDVLSS
Trigger: AGATGAAAGCACGTCGGGCTGGGCAGAGTGTGTCTCTGTGCTGCAAAGCCACGGGGAAACCCAGTCCGGACAAGTACTTCTGGTACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp GTAGAAGCGAATGGCATCCAGCCGCTCATAGTCACCCTGCCCACCTaGGTGGTCGATGTTAAACCATGTTGTCCACTCTCCGGGACAGTG +
Preference number: 1 (lower is better)
Translates to: VEANGIQPLIVTLPT*VVDVKPCCPLSGTV
Trigger: CACTGTCCCGGAGAGTGGACAACATGGTTTAACATCGACCACCCAGGTGGGCAGGGTGACTATGAGCGGCTGGATGCCATTCGCTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp GTGTGTACCCACTGCACTGGATCTCCCTCTCTTCTGTTCTGGAAATaGCGCAGCAGTTCTCCACAGCATCTCGGCACCGGATCCCATTGT +
Preference number: 1 (lower is better)
Translates to: VCTHCTGSPSLLFWK*RSSSPQHLGTGSHC
Trigger: ACAATGGGATCCGGTGCCGAGATGCTGTGGAGAACTGCTGCGGCATTTCCAGAACAGAAGAGAGGGAGATCCAGTGCAGTGGGTACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp AGTCCTGTGTCTGGGTTGAGCGACCAGAGTTTCATGGCTGGCACATaGTCTGGCATTTTGACCTGGGTCGAGTCAAGGTGGACCTTCACC +
Preference number: 1 (lower is better)
Translates to: SPVSGLSDQSFMAGT*SGILTWVESRWTFT
Trigger: GGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCCATGAAACTCTGGTCGCTCAACCCAGACACAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp GTGTCATTGTTGACTGCCAGGGGAAGGTGGTTGACCAGGTACTCGTaGAACATAGAGTTAACACTAGCTCGATGGCAGCTGCCCTGGGGG +
Preference number: 1 (lower is better)
Translates to: VSLLTARGRWLTRYS*NIELTLARWQLPWG
Trigger: CCCCCAGGGCAGCTGCCATCGAGCTAGTGTTAACTCTATGTTGCACGAGTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp TGTGTCTGGGTTGAGCGACCAGAGTTTCATGGCTGGCACATGCTCTaGCATTTTGACCTGGGTCGAGTCAAGGTGGACCTTCACCTTGCC +
Preference number: 1 (lower is better)
Translates to: CVWVERPEFHGWHML*HFDLGRVKVDLHLA
Trigger: GGCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCCATGAAACTCTGGTCGCTCAACCCAGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp TTCCCACAGTCCTGTGTCTGGGTTGAGCGACCAGAGTTTCATGGCTaGCACATGCTCTGGCATTTTGACCTGGGTCGAGTCAAGGTGGAC +
Preference number: 1 (lower is better)
Translates to: FPQSCVWVERPEFHG*HMLWHFDLGRVKVD
Trigger: GTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCCATGAAACTCTGGTCGCTCAACCCAGACACAGGACTGTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp CTGAAAGCAGTCATGGGGCAGCCGGATAAGGTAGCTCTCTGGGGTTaGGTTGCAAGGAGTCTCATCATGTGCAATGACAGTGAGCTGGGT +
Preference number: 1 (lower is better)
Translates to: LKAVMGQPDKVALWG*VARSLIMCNDSELG
Trigger: ACCCAGCTCACTGTCATTGCACATGATGAGACTCCTTGCAACCCAACCCCAGAGAGCTACCTTATCCGGCTGCCCCATGACTGCTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp GGCGTTCTGAAAGCAGTCATGGGGCAGCCGGATAAGGTAGCTCTCTaGGGTTGGGTTGCAAGGAGTCTCATCATGTGCAATGACAGTGAG +
Preference number: 1 (lower is better)
Translates to: GVLKAVMGQPDKVAL*GWVARSLIMCNDSE
Trigger: CTCACTGTCATTGCACATGATGAGACTCCTTGCAACCCAACCCCAGAGAGCTACCTTATCCGGCTGCCCCATGACTGCTTTCAGAACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp ATGGCTGGCACATGCTCTGGCATTTTGACCTGGGTCGAGTCAAGGTaGACCTTCACCTTGCCAGCATTAAGTGACTCGGAAGTGGCCTCA +
Preference number: 1 (lower is better)
Translates to: MAGTCSGILTWVESR*TFTLPALSDSEVAS
Trigger: TGAGGCCACTTCCGAGTCACTTAATGCTGGCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp CCGGTGGGTGCCTCCCATGTTACGGGATCGTACATTCACCTCCAGTaGCCCCACAATCTTAACCTTGATATAGCAGGCCCTGAACTCCAT +
Preference number: 1 (lower is better)
Translates to: PVGASHVTGSYIHLQ*PHNLNLDIAGPELH
Trigger: ATGGAGTTCAGGGCCTGCTATATCAAGGTTAAGATTGTGGGGCCACTGGAGGTGAATGTACGATCCCGTAACATGGGAGGCACCCACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp CCCTTCTTGTTGAAGGGCAGCACTTTGGTTGTGTTGACAAACTTCTaGAGCCTGTCCACAAATGTGAGCACCAGCCTCTCCGTGTCCTGG +
Preference number: 1 (lower is better)
Translates to: PFLLKGSTLVVLTNF*SLSTNVSTSLSVSW
Trigger: CCAGGACACGGAGAGGCTGGTGCTCACATTTGTGGACAGGCTGCAGAAGTTTGTCAACACAACCAAAGTGCTGCCCTTCAACAAGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp GTCCAGGGGTGCCAGCATAGTATACTCGCTGGTGTCATTGTTGACTaGCAGGGGAAGGTGGTTGACCAGGTACTCGTGCAACATAGAGTT +
Preference number: 1 (lower is better)
Translates to: VQGCQHSILAGVIVD*QGKVVDQVLVQHRV
Trigger: AACTCTATGTTGCACGAGTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTATACTATGCTGGCACCCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp GCTTTGGAGGTACTGGAAGGCACTCTGGCGGCCTACCTGCCTTTCTaGACAGTTAAAGGTCAGGGCAACTCCCACATTGCTCTTCATGAT +
Preference number: 1 (lower is better)
Translates to: ALEVLEGTLAAYLPF*TVKGQGNSHIALHD
Trigger: ATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTTAACTGTGCAGAAAGGCAGGTAGGCCGCCAGAGTGCCTTCCAGTACCTCCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp AGCGACCAGAGTTTCATGGCTGGCACATGCTCTGGCATTTTGACCTaGGTCGAGTCAAGGTGGACCTTCACCTTGCCAGCATTAAGTGAC +
Preference number: 1 (lower is better)
Translates to: SDQSFMAGTCSGILT*VESRWTFTLPALSD
Trigger: GTCACTTAATGCTGGCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCCATGAAACTCTGGTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 90 bp TGTTCCGAGGATCCAGGAAGGTCACGCTGGCCTTTACCTTTCCTGTaGAGGGCTCCCCGTTCTGCCTATAGAAACTTTTGGATGGGATCT +
Preference number: 1 (lower is better)
Translates to: CSEDPGRSRWPLPFL*RAPRSAYRNFWMGS
Trigger: AGATCCCATCCAAAAGTTTCTATAGGCAGAACGGGGAGCCCTTCACAGGAAAGGTAAAGGCCAGCGTGACCTTCCTGGATCCTCGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp CGTGATGGGCTCTTTCTGCCGAAGCATCTTGATCTCGTGGAACACTaGGCTTCCCTTCTTGTTGAAGGGCAGCACTTTGGTTGTGTTGAC +
Preference number: 1 (lower is better)
Translates to: RDGLFLPKHLDLVEH*ASLLVEGQHFGCVD
Trigger: GTCAACACAACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGCAGTGTTCCACGAGATCAAGATGCTTCGGCAGAAAGAGCCCATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 90 bp GGGATAATGTTGGTCTCCATGGCTTCCAACGTGATGGGCTCTTTCTaGCGAAGCATCTTGATCTCGTGGAACACTGCGCTTCCCTTCTTG +
Preference number: 1 (lower is better)
Translates to: GIMLVSMASNVMGSF*RSILISWNTALPFL
Trigger: CAAGAAGGGAAGCGCAGTGTTCCACGAGATCAAGATGCTTCGGCAGAAAGAGCCCATCACGTTGGAAGCCATGGAGACCAACATTATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp GCTTCCAACGTGATGGGCTCTTTCTGCCGAAGCATCTTGATCTCGTaGAACACTGCGCTTCCCTTCTTGTTGAAGGGCAGCACTTTGGTT +
Preference number: 1 (lower is better)
Translates to: ASNVMGSFCRSILIS*NTALPFLLKGSTLV
Trigger: AACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGCAGTGTTCCACGAGATCAAGATGCTTCGGCAGAAAGAGCCCATCACGTTGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp AGGGGAAAAGTGTCTCCTTCATCATTGATGAAGTTGAGGTCACTTTaGGCAGCTGTGGCCGTCGAGATGTTCCGAGGATCCAGGAAGGTC +
Preference number: 1 (lower is better)
Translates to: RGKVSPSSLMKLRSL*AAVAVEMFRGSRKV
Trigger: GACCTTCCTGGATCCTCGGAACATCTCGACGGCCACAGCTGCCCAAAGTGACCTCAACTTCATCAATGATGAAGGAGACACTTTTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp GCTTTCAAACTTGAAATCCCCTTCCTCTTCCCACAGTCCTGTGTCTaGGTTGAGCGACCAGAGTTTCATGGCTGGCACATGCTCTGGCAT +
Preference number: 1 (lower is better)
Translates to: AFKLEIPFLFPQSCV*VERPEFHGWHMLWH
Trigger: ATGCCAGAGCATGTGCCAGCCATGAAACTCTGGTCGCTCAACCCAGACACAGGACTGTGGGAAGAGGAAGGGGATTTCAAGTTTGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 90 bp CCGAAGGTTCTCAAAGGCATAGATAGGCCCATTGCTCTCCTCAGCTaGGTTGGGCCTTGGTTTGGCCATACTGATTTGGAAAGCCGTCTT +
Preference number: 1 (lower is better)
Translates to: PKVLKGIDRPIALLS*VGPWFGHTDLESRL
Trigger: AAGACGGCTTTCCAAATCAGTATGGCCAAACCAAGGCCCAACTCAGCTGAGGAGAGCAATGGGCCTATCTATGCCTTTGAGAACCTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp TTGCTCTCCTCAGCTGAGTTGGGCCTTGGTTTGGCCATACTGATTTaGAAAGCCGTCTTTTTAACCCGTGGATCCTCATGGTCTGTCCGA +
Preference number: 1 (lower is better)
Translates to: LLSSAELGLGLAILI*KAVFLTRGSSWSVR
Trigger: TCGGACAGACCATGAGGATCCACGGGTTAAAAAGACGGCTTTCCAAATCAGTATGGCCAAACCAAGGCCCAACTCAGCTGAGGAGAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp TACTCGTGCAACATAGAGTTAACACTAGCTCGATGGCAGCTGCCCTaGGGGATAACCTTTACTAATGTGCGGTCTACACGGTCTTGGTCA +
Preference number: 1 (lower is better)
Translates to: YSCNIELTLARWQLP*GITFTNVRSTRSWS
Trigger: TGACCAAGACCGTGTAGACCGCACATTAGTAAAGGTTATCCCCCAGGGCAGCTGCCATCGAGCTAGTGTTAACTCTATGTTGCACGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp TGGTTGACCAGGTACTCGTGCAACATAGAGTTAACACTAGCTCGATaGCAGCTGCCCTGGGGGATAACCTTTACTAATGTGCGGTCTACA +
Preference number: 1 (lower is better)
Translates to: WLTRYSCNIELTLAR*QLPWGITFTNVRST
Trigger: TGTAGACCGCACATTAGTAAAGGTTATCCCCCAGGGCAGCTGCCATCGAGCTAGTGTTAACTCTATGTTGCACGAGTACCTGGTCAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 90 bp AATGTATGGGGTCTCTGCCCTCACAAACTCCGCATTGATGGTAGCTaGCTTCAGGCTAGTCTTGGGCATCGTGATCATAATTGGGGCAAA +
Preference number: 1 (lower is better)
Translates to: NVWGLCPHKLRIDGS*LQASLGHRDHNWGK
Trigger: TTTGCCCCAATTATGATCACGATGCCCAAGACTAGCCTGAAGTCAGCTACCATCAATGCGGAGTTTGTGAGGGCAGAGACCCCATACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp AGCATAGTATACTCGCTGGTGTCATTGTTGACTGCCAGGGGAAGGTaGTTGACCAGGTACTCGTGCAACATAGAGTTAACACTAGCTCGA +
Preference number: 1 (lower is better)
Translates to: SIVYSLVSLLTARGR*LTRYSCNIELTLAR
Trigger: TCGAGCTAGTGTTAACTCTATGTTGCACGAGTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTATACTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 90 bp CCTTGGTTTGGCCATACTGATTTGGAAAGCCGTCTTTTTAACCCGTaGATCCTCATGGTCTGTCCGACGGTATTTAAGTTTGTTGAGGTA +
Preference number: 1 (lower is better)
Translates to: PWFGHTDLESRLFNP*ILMVCPTVFKFVEV
Trigger: TACCTCAACAAACTTAAATACCGTCGGACAGACCATGAGGATCCACGGGTTAAAAAGACGGCTTTCCAAATCAGTATGGCCAAACCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 90 bp TTAACAAGTGACAGTCTGTGCATCAGTCTCACGACAGCTGTCACATaGGATGGACAGAAAGGACTAAGAACCACAAGACTTAGTTGCTCA +
Preference number: 1 (lower is better)
Translates to: LTSDSLCISLTTAVT*DGQKGLRTTRLSCS
Trigger: TGAGCAACTAAGTCTTGTGGTTCTTAGTCCTTTCTGTCCATCTCATGTGACAGCTGTCGTGAGACTGATGCACAGACTGTCACTTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp AGCAGTGACTCGGCCCCGGACGATGCTCCGTGTCTCTGCGCATCGTaGGCAGCTGCACTCCACAGCCACCTTGGTGGGCAGTGTGTACCC +
Preference number: 2 (lower is better)
Translates to: SSDSAPDDAPCLCAS*AAALHSHLGGQCVP
Trigger: GGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAGCATCGTCCGGGGCCGAGTCACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp CGATGCTCCGTGTCTCTGCGCATCGTTGGCAGCTGCACTCCACAGCCACCTTGGCCACCTGGCCAGTGCTaGCCGCAGGCATCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: RCSVSLRIVGSCTPQPPWPPGQC*PQASSQ
Trigger: CTGACTGGATGCCTGCGGGCAGCACTGGCCAGGTGG...CCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAGCATCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp TCTCAGAGGGGCCCATGCTTCCACGCCGGCGTAGGCCACCCCTGCTaGCCCGTTGTTGCCTCATGGCTGGTACTCTTCCTTGGACAGTGC +
Preference number: 2 (lower is better)
Translates to: SQRGPCFHAGVGHPC*PVVASWLVLFLGQC
Trigger: GCACTGTCCAAGGAAGAGTACCAGCCATGAGGCAACAACGGGCAAGCAGGGGTGGCCTACGCCGGCGTGGAAGCATGGGCCCCTCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp GAAATGCCGCAGCAGTTCTCCACAGCATCTCGGCACCGGATCCCATaGTCCTGCTGCCCTGCACAGGTCTTGATCGGGCAGCGGCCTACG +
Preference number: 2 (lower is better)
Translates to: EMPQQFSTASRHRIP*SCCPAQVLIGQRPT
Trigger: CGTAGGCCGCTGCCCGATCAAGACCTGTGCAGGGCAGCAGGACAATGGGATCCGGTGCCGAGATGCTGTGGAGAACTGCTGCGGCATTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp GCCACCCCTGCTTGCCCGTTGTTGCCTCATGGCTGGTACTCTTCCTaGGACAGTGCCTGTAGCTGGGGACCTGGCCGGTGTGCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: ATPACPLLPHGWYSS*DSACSWGPGRCALE
Trigger: CTCCAAAGCACACCGGCCAGGTCCCCAGCTACAGGCACTGTCCAAGGAAGAGTACCAGCCATGAGGCAACAACGGGCAAGCAGGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp TCTTCCTTGGACAGTGCCTGTAGCTGGGGACCTGGCCGGTGTGCTTaGGAGGTACTGGAAGGCACTCTGGCGGCCTACCTGCCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: SSLDSACSWGPGRCA*EVLEGTLAAYLPFC
Trigger: GCAGAAAGGCAGGTAGGCCGCCAGAGTGCCTTCCAGTACCTCCAAAGCACACCGGCCAGGTCCCCAGCTACAGGCACTGTCCAAGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR TCA 90 bp GGACGATGCTCCGTGTCTCTGCGCATCGTTGGCAGCTGCACTCCACAGCCACCTCGCCTCACTGCACAGTaGCACTGTCTGTGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: GRCSVSLRIVGSCTPQPPRLTAQ*HCLCQA
Trigger: TGCTTGGCACAGACAGTGTCACTGTGCAGTGAGGCG...AGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAGCATCGTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp CACAGCCCCAGCATCACTCTGAGCCTTACAGAAGTACTCCCCTGCTTGGTCCTGGGACCACCTGGCCAGTaGTGCCCGCAGGCATCCAGT +
Preference number: 2 (lower is better)
Translates to: HSPSITLSLTEVLPCLVLGPPGQ*CPQASS
Trigger: ACTGGATGCCTGCGGGCAGCACTGGCCAGGTGGTCC...CAGGACCAAGCAGGGGAGTACTTCTGTAAGGCTCAGAGTGATGCTGGGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp AACTCCCTGAATTTGCTCACTGGGCAGGAACCTCTCACTCCGGTAAGTCCTCACCTGCCGTGGACCACCTaGCCAGTGCTGCCCGCAGGC +
Preference number: 2 (lower is better)
Translates to: NSLNLLTGQEPLTPVSPHLPWTT*PVLPAG
Trigger: GCCTGCGGGCAGCACTGGCCAGGTGGTCCACGGCAG...GTGAGGACTTACCGGAGTGAGAGGTTCCTGCCCAGTGAGCAAATTCAGGGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp CTCCGTGTCTCTGCGCATCGTTGGCAGCTGCACTCCACAGCCACCTaGGTGGGCAGTGTGTACCCACTGCACTGGATCTCCCTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: LRVSAHRWQLHSTAT*VGSVYPLHWISLSS
Trigger: AGAAGAGAGGGAGATCCAGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR TCA 90 bp CACATGCTCTGGCATTTTGACCTGGGTCGAGTCAAGGTGGACCTTCACCTTGCCGTCTGCACCCCAGTGTaGCCGCAGGCAGCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: HMLWHFDLGRVKVDLHLAVCTPV*PQAAEH
Trigger: GTGCTCAGCTGCCTGCGGTCACACTGGGGTGCAGAC...GGCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR TCA 90 bp CGATGCTCCGTGTCTCTGCGCATCGTTGGCAGCTGCACTCCACAGCCACCTTGGCGCATTGATGGTAGCTaGCTTCAGGCTAGTCTTGGG +
Preference number: 2 (lower is better)
Translates to: RCSVSLRIVGSCTPQPPWRIDGS*LQASLG
Trigger: CCCAAGACTAGCCTGAAGTCAGCTACCATCAATGCG...CCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAGCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR TCA 90 bp AACTCCCTGAATTTGCTCACTGGGCAGGAACCTCTCACTCCGGTAAGTCCTCACCGTTGTCAGCAGCAGTaGCTCGGCCCCGGACGATGC +
Preference number: 2 (lower is better)
Translates to: NSLNLLTGQEPLTPVSPHRCQQQ*LGPGRC
Trigger: GCATCGTCCGGGGCCGAGTCACTGCTGCTGACAACG...GTGAGGACTTACCGGAGTGAGAGGTTCCTGCCCAGTGAGCAAATTCAGGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp CAGCAGTTCTCCACAGCATCTCGGCACCGGATCCCATTGTCCTGCTGCCCTGCAGGTCAGCATCTTTGGTaGCTTGGCCAGCAGGTAGAC +
Preference number: 2 (lower is better)
Translates to: QQFSTASRHRIPLSCCPAGQHLW*LGQQVD
Trigger: GTCTACCTGCTGGCCAAGGCACCAAAGATGCTGACC...TGCAGGGCAGCAGGACAATGGGATCCGGTGCCGAGATGCTGTGGAGAACTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp GGCAGCTGCACTCCACAGCCACCTTGGTGGGCAGTGTGTACCCACTGCACTGGATCCTCAGCACCAGCTTaGTCTCGTGCTTATAGAGGG +
Preference number: 2 (lower is better)
Translates to: GSCTPQPPWWAVCTHCTGSSAPA*SRAYRG
Trigger: CCCTCTATAAGCACGAGAGCAAGCTGGTGCTGAGGA...TCCAGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp TATTCCCCATGTACACATGGCCAAAGCGCATGGGCTCCCCGTTGTCAGCAGCAGCCTGCTTGGTCCTGCTaGAGGTTCCTCAGCACCAGC +
Preference number: 2 (lower is better)
Translates to: YSPCTHGQSAWAPRCQQQPAWSC*RFLSTS
Trigger: GCTGGTGCTGAGGAACCTGCAGCAGGACCAAGCAGG...CTGCTGCTGACAACGGGGAGCCCATGCGCTTTGGCCATGTGTACATGGGGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp CCCAGAGGGTCCAGGGGTGCCAGCATAGTATACTCGCTGGTGTCATaGTTGACTGCCAGGGGAAGGTGGTTGACCAGGTACTCGTGCAAC +
Preference number: 2 (lower is better)
Translates to: PRGSRGASIVYSLVS*LTARGRWLTRYSCN
Trigger: GTTGCACGAGTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTATACTATGCTGGCACCCCTGGACCCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp GGCAGCTGCACTCCACAGCCACCTTGGTGGGCAGTGTGTACCCACTGCACTGGAAGCGCACGGTATAATTaGAACAGTTCTGGCCTGGTC +
Preference number: 2 (lower is better)
Translates to: GSCTPQPPWWAVCTHCTGSARYN*NSSGLV
Trigger: GACCAGGCCAGAACTGTTCCAATTATACCGTGCGCT...TCCAGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp GAAGGAATTGCTGGCGTTCTGAAAGCAGTCATGGGGCAGCCGGATAAGGTAGCTTCGCAAGGACCCTGGTaGGCAGAGGAAGCGCACGGT +
Preference number: 2 (lower is better)
Translates to: EGIAGVLKAVMGQPDKVASQGPW*AEEAHG
Trigger: ACCGTGCGCTTCCTCTGCCCACCAGGGTCCTTGCGA...AGCTACCTTATCCGGCTGCCCCATGACTGCTTTCAGAACGCCAGCAATTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp GTGCCTCCCATGTTACGGGATCGTACATTCACCTCCAGTGGCCCCACAATCTTATCCTCGCAAGGACCCTaGTGGGCAGAGGAAGCGCAC +
Preference number: 2 (lower is better)
Translates to: VPPMLRDRTFTSSGPTILSSQGP*WAEEAH
Trigger: GTGCGCTTCCTCTGCCCACCAGGGTCCTTGCGAGGA...TAAGATTGTGGGGCCACTGGAGGTGAATGTACGATCCCGTAACATGGGAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp TTGTGGTACCAGAAGTACTTGTCCGGACTGGGTTTCCCCGTGGCTTaGCAGCACAGAGACACACTCTGCCCAGCCCGACGTGCTTTCATC +
Preference number: 2 (lower is better)
Translates to: LWYQKYLSGLGFPVA*QHRDTLCPARRAFI
Trigger: GATGAAAGCACGTCGGGCTGGGCAGAGTGTGTCTCTGTGCTGCAAAGCCACGGGGAAACCCAGTCCGGACAAGTACTTCTGGTACCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp TATTCCCCATGTACACATGGCCAAAGCGCATGGGCTCCCCGTTGTCAGCAGCAGACTCCAGATGTGCTCTaGATCTCCTCGCAAGGACCC +
Preference number: 2 (lower is better)
Translates to: YSPCTHGQSAWAPRCQQQTPDVL*ISSQGP
Trigger: GGGTCCTTGCGAGGAGATGCAGAGCACATCTGGAGT...CTGCTGCTGACAACGGGGAGCCCATGCGCTTTGGCCATGTGTACATGGGGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp CGATGCTCCGTGTCTCTGCGCATCGTTGGCAGCTGCACTCCACAGCCACCTTGGAGGAGTCTCATCATGTaGAATGACAGTGAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: RCSVSLRIVGSCTPQPPWRSLIM*NDSELG
Trigger: ACCCAGCTCACTGTCATTGCACATGATGAGACTCCT...CCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAGCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp GAACACTGCGCTTCCCTTCTTGTTGAAGGGCAGCACTTTGGTTGTGTTGACAAAAGCGGCTCCTGGAGCTaGGCCACCTCCAGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: EHCASLLVEGQHFGCVDKSGSWS*ATSREG
Trigger: TCCCTCCCTGGAGGTGGCCCAGCTCCAGGAGCCGCT...TTTGTCAACACAACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGCAGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp CAGCAGTTCTCCACAGCATCTCGGCACCGGATCCCATTGTCCTGCTGCCCTGCAGATAAGGTAGCTCTCTaGGGTTGGGTTGCAAGGAGT +
Preference number: 2 (lower is better)
Translates to: QQFSTASRHRIPLSCCPADKVAL*GWVARS
Trigger: ACTCCTTGCAACCCAACCCCAGAGAGCTACCTTATC...TGCAGGGCAGCAGGACAATGGGATCCGGTGCCGAGATGCTGTGGAGAACTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp GTGCCTCCCATGTTACGGGATCGTACATTCACCTCCAGTGGCCCCACAATCTTACATGGCCAAAGCGCATaGGCTCCCCGTTGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: VPPMLRDRTFTSSGPTILHGQSA*APRCQQ
Trigger: CTGCTGACAACGGGGAGCCCATGCGCTTTGGCCATG...TAAGATTGTGGGGCCACTGGAGGTGAATGTACGATCCCGTAACATGGGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR TCA 90 bp TTTGGATGGGATCTCCAGCTCAGCCACAGGGTCTTCACCAATCACCTCTCCCAGGCCCCAGCATCACTCTaGGCCTTACAGAAGTACTCC +
Preference number: 2 (lower is better)
Translates to: FGWDLQLSHRVFTNHLSQAPASL*ALQKYS
Trigger: GGAGTACTTCTGTAAGGCTCAGAGTGATGCTGGGGC...CTGGGAGAGGTGATTGGTGAAGACCCTGTGGCTGAGCTGGAGATCCCATCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp AAAGGTCAGGGCAACTCCCACATTGCTCTTCATGATTCTGGAGGAGCCATCGGACCACAGCCACCTTGGTaGGCAGTGTGTACCCACTGC +
Preference number: 2 (lower is better)
Translates to: KGQGNSHIALHDSGGAIGPQPPW*AVCTHC
Trigger: GCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGG...TCCGATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp GTCTCCATGGCTTCCAACGTGATGGGCTCTTTCTGCCGAAGCATCTaGATCTCGTGGAACACTGCGCTTCCCTTCTTGTTGAAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: VSMASNVMGSFCRSI*ISWNTALPFLLKGS
Trigger: GCTGCCCTTCAACAAGAAGGGAAGCGCAGTGTTCCACGAGATCAAGATGCTTCGGCAGAAAGAGCCCATCACGTTGGAAGCCATGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp GGGTTGAGCGACCAGAGTTTCATGGCTGGCACATGCTCTGGCATTTaGACCTGGGTCGAGTCAAGGTGGACCTTCACCTTGCCAGCATTA +
Preference number: 2 (lower is better)
Translates to: GLSDQSFMAGTCSGI*TWVESRWTFTLPAL
Trigger: TAATGCTGGCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCCATGAAACTCTGGTCGCTCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp AGAGGGTCCAGGGGTGCCAGCATAGTATACTCGCTGGTGTCATTGTaGACTGCCAGGGGAAGGTGGTTGACCAGGTACTCGTGCAACATA +
Preference number: 2 (lower is better)
Translates to: RGSRGASIVYSLVSL*TARGRWLTRYSCNI
Trigger: TATGTTGCACGAGTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTATACTATGCTGGCACCCCTGGACCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp GTTAAAGGTCAGGGCAACTCCCACATTGCTCTTCATGATTCTGGAGGAGCCATCTCCCCTGCTTGGTCCTaGTGCAGGTTCCTCAGCACC +
Preference number: 2 (lower is better)
Translates to: VKGQGNSHIALHDSGGAISPAWS*CRFLST
Trigger: GGTGCTGAGGAACCTGCAGCAGGACCAAGCAGGGGA...GATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp CACATGCTCTGGCATTTTGACCTGGGTCGAGTCAAGGTGGACCTTCACCTTGCCATCCCATTGTCCTGCTaGCCTGCACAGGTCTTGATC +
Preference number: 2 (lower is better)
Translates to: HMLWHFDLGRVKVDLHLAIPLSC*PAQVLI
Trigger: GATCAAGACCTGTGCAGGGCAGCAGGACAATGGGAT...GGCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp GTATACTCGCTGGTGTCATTGTTGACTGCCAGGGGAAGGTGGTTGACCAGGTACTGGCTTGGGCCACCATaGCAGGTAGTCTTCAGTCCA +
Preference number: 2 (lower is better)
Translates to: VYSLVSLLTARGRWLTRYWLGPP*QVVFSP
Trigger: TGGACTGAAGACTACCTGGCATGGTGGCCCAAGCCA...GTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp CTTTCATCTCAGGGTTCATTACAATGTATGGGGTCTCTGCCCTCACAAACTCCGCAAGCTGTGCAGGCCTaGCTCATGCAGAGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: LSSQGSLQCMGSLPSQTPQAVQA*LMQSWP
Trigger: GGGCCAGCTCTGCATGAGCCAGGCCTGCACAGCTTG...CGGAGTTTGTGAGGGCAGAGACCCCATACATTGTAATGAACCCTGAGATGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp AACTCCCTGAATTTGCTCACTGGGCAGGAACCTCTCACTCCGGTAAGTCCTCACGACTGGGTTTCCCCGTaGCTTTGCAGCACAGAGACA +
Preference number: 2 (lower is better)
Translates to: NSLNLLTGQEPLTPVSPHDWVSP*LCSTET
Trigger: TGTCTCTGTGCTGCAAAGCCACGGGGAAACCCAGTC...GTGAGGACTTACCGGAGTGAGAGGTTCCTGCCCAGTGAGCAAATTCAGGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp GAAGGAATTGCTGGCGTTCTGAAAGCAGTCATGGGGCAGCCGGATAAGGTAGCTAAGTACTCCCCTGCTTaGTCCTGCTGCAGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: EGIAGVLKAVMGQPDKVAKYSPA*SCCRFL
Trigger: GAGGAACCTGCAGCAGGACCAAGCAGGGGAGTACTT...AGCTACCTTATCCGGCTGCCCCATGACTGCTTTCAGAACGCCAGCAATTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp CACATGCTCTGGCATTTTGACCTGGGTCGAGTCAAGGTGGACCTTCACCTTGCCGTAGCTCTCTGGGGTTaGGTTGCAAGGAGTCTCATC +
Preference number: 2 (lower is better)
Translates to: HMLWHFDLGRVKVDLHLAVALWG*VARSLI
Trigger: GATGAGACTCCTTGCAACCCAACCCCAGAGAGCTAC...GGCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp GTATACTCGCTGGTGTCATTGTTGACTGCCAGGGGAAGGTGGTTGACCAGGTACGGCTGGCACATGCTCTaGCATTTTGACCTGGGTCGA +
Preference number: 2 (lower is better)
Translates to: VYSLVSLLTARGRWLTRYGWHML*HFDLGR
Trigger: TCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCC...GTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp GTATACTCGCTGGTGTCATTGTTGACTGCCAGGGGAAGGTGGTTGACCAGGTACCCCTGCCCACCTGGGTaGTCGATGTTAAACCATGTT +
Preference number: 2 (lower is better)
Translates to: VYSLVSLLTARGRWLTRYPCPPG*SMLNHV
Trigger: AACATGGTTTAACATCGACCACCCAGGTGGGCAGGG...GTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp AAAGGTCAGGGCAACTCCCACATTGCTCTTCATGATTCTGGAGGAGCCATCGGACATTTACCTGGCCCATaGGGCAGGTCAGGTCACAAG +
Preference number: 2 (lower is better)
Translates to: KGQGNSHIALHDSGGAIGHLPGP*GRSGHK
Trigger: CTTGTGACCTGACCTGCCCCATGGGCCAGGTAAATG...TCCGATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp AAAGGTCAGGGCAACTCCCACATTGCTCTTCATGATTCTGGAGGAGCCATCGGATGGGTCGAGTCAAGGTaGACCTTCACCTTGCCAGCA +
Preference number: 2 (lower is better)
Translates to: KGQGNSHIALHDSGGAIGWVESR*TFTLPA
Trigger: TGCTGGCAAGGTGAAGGTCCACCTTGACTCGACCCA...TCCGATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp GTATACTCGCTGGTGTCATTGTTGACTGCCAGGGGAAGGTGGTTGACCAGGTACCCACAGTCCTGTGTCTaGGTTGAGCGACCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: VYSLVSLLTARGRWLTRYPQSCV*VERPEF
Trigger: AAACTCTGGTCGCTCAACCCAGACACAGGACTGTGG...GTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp TGCTCTGGCATTTTGACCTGGGTCGAGTCAAGGTGGACCTTCACCTaGCCAGCATTAAGTGACTCGGAAGTGGCCTCATCTCTAAAGTCC +
Preference number: 2 (lower is better)
Translates to: CSGILTWVESRWTFT*PALSDSEVASSLKS
Trigger: GGACTTTAGAGATGAGGCCACTTCCGAGTCACTTAATGCTGGCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR TCA 90 bp CTTTTTAACCCGTGGATCCTCATGGTCTGTCCGACGGTATTTAAGTTTGTTGAGGTGACCGCAGGCAGCTaGGCACTTGCTCCAGGGAGA +
Preference number: 2 (lower is better)
Translates to: LFNPWILMVCPTVFKFVEVTAGS*ALAPGR
Trigger: TCTCCCTGGAGCAAGTGCTCAGCTGCCTGCGGTCAC...CTCAACAAACTTAAATACCGTCGGACAGACCATGAGGATCCACGGGTTAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR TCA 90 bp AAAGGTCAGGGCAACTCCCACATTGCTCTTCATGATTCTGGAGGAGCCATCGGACGCTTCCCTTCTTGTTaGAGGGCAGCACTTTGGTTG +
Preference number: 2 (lower is better)
Translates to: KGQGNSHIALHDSGGAIGRFPSC*RAALWL
Trigger: CAACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCG...TCCGATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR TCA 90 bp GTTAAAGGTCAGGGCAACTCCCACATTGCTCTTCATGATTCTGGAGGAGCCATCATTGCTCTCCTCAGCTaGGTTGGGCCTTGGTTTGGC +
Preference number: 2 (lower is better)
Translates to: VKGQGNSHIALHDSGGAIIALLS*VGPWFG
Trigger: GCCAAACCAAGGCCCAACTCAGCTGAGGAGAGCAAT...GATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp CTTCTTGTTGAAGGGCAGCACTTTGGTTGTGTTGACAAACTTCTGCAGCCTGTCTTCTGGCCTGGTCTCTaGTCCCTGTTGAGGCACCAG +
Preference number: 2 (lower is better)
Translates to: LLVEGQHFGCVDKLLQPVFWPGL*SLLRHQ
Trigger: CTGGTGCCTCAACAGGGAGCAGAGACCAGGCCAGAA...GACAGGCTGCAGAAGTTTGTCAACACAACCAAAGTGCTGCCCTTCAACAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp AAAGGTCAGGGCAACTCCCACATTGCTCTTCATGATTCTGGAGGAGCCATCGGACAGGAACTCCAGATGTaGTCTGCATCTCCTCGCAAG +
Preference number: 2 (lower is better)
Translates to: KGQGNSHIALHDSGGAIGQELQM*SASPRK
Trigger: CTTGCGAGGAGATGCAGAGCACATCTGGAGTTCCTG...TCCGATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp AAAGGTCAGGGCAACTCCCACATTGCTCTTCATGATTCTGGAGGAGCCATCGGAGCAGTGTGTACCCACTaGACTGGATCTCCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: KGQGNSHIALHDSGGAIGAVCTH*TGSPSL
Trigger: AAGAGAGGGAGATCCAGTGCAGTGGGTACACACTGC...TCCGATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp AACTCCCTGAATTTGCTCACTGGGCAGGAACCTCTCACTCCGGTAAGTCCTCACGCAATGACAGTGAGCTaGGTGACCTTGGACTTCACA +
Preference number: 2 (lower is better)
Translates to: NSLNLLTGQEPLTPVSPHAMTVS*VTLDFT
Trigger: TGTGAAGTCCAAGGTCACCCAGCTCACTGTCATTGC...GTGAGGACTTACCGGAGTGAGAGGTTCCTGCCCAGTGAGCAAATTCAGGGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp GTGCCTCCCATGTTACGGGATCGTACATTCACCTCCAGTGGCCCCACAATCTTACCCTCTCTTCTGTTCTaGAAATGCCGCAGCAGTTCT +
Preference number: 2 (lower is better)
Translates to: VPPMLRDRTFTSSGPTILPSLLF*KCRSSS
Trigger: AGAACTGCTGCGGCATTTCCAGAACAGAAGAGAGGG...TAAGATTGTGGGGCCACTGGAGGTGAATGTACGATCCCGTAACATGGGAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp TGCCGAAGCATCTTGATCTCGTGGAACACTGCGCTTCCCTTCTTGTaGAAGGGCAGCACTTTGGTTGTGTTGACAAACTTCTGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: CRSILISWNTALPFL*KGSTLVVLTNFCSL
Trigger: CAGGCTGCAGAAGTTTGTCAACACAACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGCAGTGTTCCACGAGATCAAGATGCTTCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp AAGGGGAAAAGTGTCTCCTTCATCATTGATGAAGTTGAGGTCACTTaGGGCAGCTGTGGCCGTCGAGATGTTCCGAGGATCCAGGAAGGT +
Preference number: 2 (lower is better)
Translates to: KGKSVSFIIDEVEVT*GSCGRRDVPRIQEG
Trigger: ACCTTCCTGGATCCTCGGAACATCTCGACGGCCACAGCTGCCCAAAGTGACCTCAACTTCATCAATGATGAAGGAGACACTTTTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp CCTACCTGCCTTTCTGCACAGTTAAAGGTCAGGGCAACTCCCACATaGCTCTTCATGATTCTGGAGGAGCCATCGGAAGTGCCATCAAAG +
Preference number: 2 (lower is better)
Translates to: PTCLSAQLKVRATPT*LFMILEEPSEVPSK
Trigger: CTTTGATGGCACTTCCGATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTTAACTGTGCAGAAAGGCAGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp AAAGGTCAGGGCAACTCCCACATTGCTCTTCATGATTCTGGAGGAGCCATCGGACTTTGTAGCCAGTCATaGTCACGCGGTTATTCCCCA +
Preference number: 2 (lower is better)
Translates to: KGQGNSHIALHDSGGAIGLCSQS*SRGYSP
Trigger: TGGGGAATAACCGCGTGAGCATGACTGGCTACAAAG...TCCGATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp TTTGGATGGGATCTCCAGCTCAGCCACAGGGTCTTCACCAATCACCTCTCCCAGAGCAGTGTGTTGTTGTaGTACCAGAAGTACTTGTCC +
Preference number: 2 (lower is better)
Translates to: FGWDLQLSHRVFTNHLSQSSVLL*YQKYLS
Trigger: GGACAAGTACTTCTGGTACCACAACAACACACTGCT...CTGGGAGAGGTGATTGGTGAAGACCCTGTGGCTGAGCTGGAGATCCCATCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp TTCTGCCGAAGCATCTTGATCTCGTGGAACACTGCGCTTCCCTTCTaGTTGAAGGGCAGCACTTTGGTTGTGTTGACAAACTTCTGCAGC +
Preference number: 2 (lower is better)
Translates to: FCRSILISWNTALPF*LKGSTLVVLTNFCS
Trigger: GCTGCAGAAGTTTGTCAACACAACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGCAGTGTTCCACGAGATCAAGATGCTTCGGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR GCA 90 bp GTCTTTTTAACCCGTGGATCCTCATGGTCTGTCCGACGGTATTTAAGTTTGTTGAGGCAGCTGAGCACTTaGTCCAGGGAGACCAGGAAC +
Preference number: 2 (lower is better)
Translates to: VFLTRGSSWSVRRYLSLLRQLST*SRETRN
Trigger: GTTCCTGGTCTCCCTGGAGCAAGTGCTCAGCTGCCT...CAACAAACTTAAATACCGTCGGACAGACCATGAGGATCCACGGGTTAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp GTCTTTTTAACCCGTGGATCCTCATGGTCTGTCCGACGGTATTTAAGTTTGTTGCTCTCCGGGACAGTGTaGAGCCCTTCATTCCGGCTT +
Preference number: 2 (lower is better)
Translates to: VFLTRGSSWSVRRYLSLLLSGTV*SPSFRL
Trigger: AAGCCGGAATGAAGGGCTCCACACTGTCCCGGAGAG...CAACAAACTTAAATACCGTCGGACAGACCATGAGGATCCACGGGTTAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp TTCATTGAAAGGAACTGTGTTATAGTCATAGCGATCCCCCTCGATCTGATAGAACAGGCATCCAGTCAGTaGTCCGGGCCTCTAGCCGCA +
Preference number: 2 (lower is better)
Translates to: FIERNCVIVIAIPLDLIEQASSQ*SGPLAA
Trigger: TGCGGCTAGAGGCCCGGACCACTGACTGGATGCCTG...TTCTATCAGATCGAGGGGGATCGCTATGACTATAACACAGTTCCTTTCAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp GCCCTCACAAACTCCGCATTGATGGTAGCTGACTTCAGGCTAGTCTaGGGCATCGTGATCATAATTGGGGCAAACTTGGTCTTGGTGATT +
Preference number: 2 (lower is better)
Translates to: ALTNSALMVADFRLV*GIVIIIGANLVLVI
Trigger: AATCACCAAGACCAAGTTTGCCCCAATTATGATCACGATGCCCAAGACTAGCCTGAAGTCAGCTACCATCAATGCGGAGTTTGTGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp GGGTTCATTACAATGTATGGGGTCTCTGCCCTCACAAACTCCGCATaGATGGTAGCTGACTTCAGGCTAGTCTTGGGCATCGTGATCATA +
Preference number: 2 (lower is better)
Translates to: GFITMYGVSALTNSA*MVADFRLVLGIVII
Trigger: TATGATCACGATGCCCAAGACTAGCCTGAAGTCAGCTACCATCAATGCGGAGTTTGTGAGGGCAGAGACCCCATACATTGTAATGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp CCATATGTTCTAAGGGGAAAAGTGTCTCCTTCATCATTGATGAAGTaGAGGTCACTTTGGGCAGCTGTGGCCGTCGAGATGTTCCGAGGA +
Preference number: 2 (lower is better)
Translates to: PYVLRGKVSPSSLMK*RSLWAAVAVEMFRG
Trigger: TCCTCGGAACATCTCGACGGCCACAGCTGCCCAAAGTGACCTCAACTTCATCAATGATGAAGGAGACACTTTTCCCCTTAGAACATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 90 bp ATAGTATACTCGCTGGTGTCATTGTTGACTGCCAGGGGAAGGTGGTaGACCAGGTACTCGTGCAACATAGAGTTAACACTAGCTCGATGG +
Preference number: 2 (lower is better)
Translates to: IVYSLVSLLTARGRW*TRYSCNIELTLARW
Trigger: CCATCGAGCTAGTGTTAACTCTATGTTGCACGAGTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTATACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp GTGCCTCCCATGTTACGGGATCGTACATTCACCTCCAGTGGCCCCACAATCTTAAGTAGAAGGAATTGCTaGCGTTCTGAAAGCAGTCAT +
Preference number: 2 (lower is better)
Translates to: VPPMLRDRTFTSSGPTILSRRNC*RSESSH
Trigger: ATGACTGCTTTCAGAACGCCAGCAATTCCTTCTACT...TAAGATTGTGGGGCCACTGGAGGTGAATGTACGATCCCGTAACATGGGAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp CTTTTTAACCCGTGGATCCTCATGGTCTGTCCGACGGTATTTAAGTTTGTTGAGAAGTTGAGGTCACTTTaGGCAGCTGTGGCCGTCGAG +
Preference number: 2 (lower is better)
Translates to: LFNPWILMVCPTVFKFVEKLRSL*AAVAVE
Trigger: CTCGACGGCCACAGCTGCCCAAAGTGACCTCAACTT...CTCAACAAACTTAAATACCGTCGGACAGACCATGAGGATCCACGGGTTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp AACATAGAGTTAACACTAGCTCGATGGCAGCTGCCCTGGGGGATAACCTTTACTACCCGTGGATCCTCATaGTCTGTCCGACGGTATTTA +
Preference number: 2 (lower is better)
Translates to: NIELTLARWQLPWGITFTTRGSS*SVRRYL
Trigger: TAAATACCGTCGGACAGACCATGAGGATCCACGGGT...AGTAAAGGTTATCCCCCAGGGCAGCTGCCATCGAGCTAGTGTTAACTCTATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR TCA 90 bp TTCATTGAAAGGAACTGTGTTATAGTCATAGCGATCCCCCTCGATCTGATAGAAGGGGGATGTGGAGTGTaGAGGTGCCTTTGTAGCCAG +
Preference number: 2 (lower is better)
Translates to: FIERNCVIVIAIPLDLIEGGCGV*RCLCSQ
Trigger: CTGGCTACAAAGGCACCTTCACACTCCACATCCCCC...TTCTATCAGATCGAGGGGGATCGCTATGACTATAACACAGTTCCTTTCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp TTCATTGAAAGGAACTGTGTTATAGTCATAGCGATCCCCCTCGATCTGATAGAAAGCCTCTCCGTGTCCTaGGGGATGTGGAGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: FIERNCVIVIAIPLDLIESLSVS*GMWSVK
Trigger: CTTCACACTCCACATCCCCCAGGACACGGAGAGGCT...TTCTATCAGATCGAGGGGGATCGCTATGACTATAACACAGTTCCTTTCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp TTCATTGAAAGGAACTGTGTTATAGTCATAGCGATCCCCCTCGATCTGATAGAATCTGGCATTTTGACCTaGGTCGAGTCAAGGTGGACC +
Preference number: 2 (lower is better)
Translates to: FIERNCVIVIAIPLDLIESGILT*VESRWT
Trigger: GGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGA...TTCTATCAGATCGAGGGGGATCGCTATGACTATAACACAGTTCCTTTCAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CCA 90 bp TTCATTGAAAGGAACTGTGTTATAGTCATAGCGATCCCCCTCGATCTGATAGAAAGCATCTTGATCTCGTaGAACACTGCGCTTCCCTTC +
Preference number: 2 (lower is better)
Translates to: FIERNCVIVIAIPLDLIESILIS*NTALPF
Trigger: GAAGGGAAGCGCAGTGTTCCACGAGATCAAGATGCT...TTCTATCAGATCGAGGGGGATCGCTATGACTATAACACAGTTCCTTTCAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp AGCCCTCACGGGGACTGCCGTGGACCACCTGGCCAGTaGTGCCCGCAGGCATCCAGTCAGTGGTCCGGGCCT +
Preference number: 3 (lower is better)
Translates to: SPHGDCRGPPGQ*CPQASSQWSGP
Trigger: AGGCCCGGACCACTGACTGGATGCCTGCGGGCAGCACTGGCCAGGTGGTCCACGGCAGTCCCCGTGAGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CCACCTGGCCAGTGCTGCCCGCAGGCATCCAGTCAGTaGTCCGGGCCTCTAGCCGCAGGGGACGGGCACACA +
Preference number: 3 (lower is better)
Translates to: PPGQCCPQASSQ*SGPLAAGDGHT
Trigger: TGTGTGCCCGTCCCCTGCGGCTAGAGGCCCGGACCACTGACTGGATGCCTGCGGGCAGCACTGGCCAGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp CCTCACGGGGACTGCCGTGGACCACCTGGCCAGTGCTaGCCGCAGGCATCCAGTCAGTGGTCCGGGCCTCTA +
Preference number: 3 (lower is better)
Translates to: PHGDCRGPPGQC*PQASSQWSGPL
Trigger: TAGAGGCCCGGACCACTGACTGGATGCCTGCGGGCAGCACTGGCCAGGTGGTCCACGGCAGTCCCCGTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CACCAGAAGCCCTCACGGGGACTGCCGTGGACCACCTaGCCAGTGCTGCCCGCAGGCATCCAGTCAGTGGTC +
Preference number: 3 (lower is better)
Translates to: HQKPSRGLPWTT*PVLPAGIQSVV
Trigger: GACCACTGACTGGATGCCTGCGGGCAGCACTGGCCAGGTGGTCCACGGCAGTCCCCGTGAGGGCTTCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp TGCCTTGGCCAGCAGGTAGACAGCGGCTCCTGGAGCTaGGCCACCTCCAGGGAGGGAGATGGCCCCGTGAAG +
Preference number: 3 (lower is better)
Translates to: CLGQQVDSGSWS*ATSREGDGPVK
Trigger: CTTCACGGGGCCATCTCCCTCCCTGGAGGTGGCCCAGCTCCAGGAGCCGCTGTCTACCTGCTGGCCAAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 72 bp GCCAAGCAGGTGCGGGTACGGGTCTGCACCCCAGTGTaGCCGCAGGCAGCTGAGCACTTGCTCCAGGGAGAC +
Preference number: 3 (lower is better)
Translates to: AKQVRVRVCTPV*PQAAEHLLQGD
Trigger: GTCTCCCTGGAGCAAGTGCTCAGCTGCCTGCGGTCACACTGGGGTGCAGACCCGTACCCGCACCTGCTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CCCATGGGGCAGGTCAGGTCACAAGCTGTGCAGGCCTaGCTCATGCAGAGCTGGCCCTCCTCGGTCGCCTCA +
Preference number: 3 (lower is better)
Translates to: PMGQVRSQAVQA*LMQSWPSSVAS
Trigger: TGAGGCGACCGAGGAGGGCCAGCTCTGCATGAGCCAGGCCTGCACAGCTTGTGACCTGACCTGCCCCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CGGCCCCGGACGATGCTCCGTGTCTCTGCGCATCGTTaGCAGCTGCACTCCACAGCCACCTTGGTGGGCAGT +
Preference number: 3 (lower is better)
Translates to: RPRTMLRVSAHR*QLHSTATLVGS
Trigger: ACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAGCATCGTCCGGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 72 bp GCAGAGCTGGCCCTCCTCGGTCGCCTCACTGCACAGTaGCACTGTCTGTGCCAAGCAGGTGCGGGTACGGGT +
Preference number: 3 (lower is better)
Translates to: AELALLGRLTAQ*HCLCQAGAGTG
Trigger: ACCCGTACCCGCACCTGCTTGGCACAGACAGTGTCACTGTGCAGTGAGGCGACCGAGGAGGGCCAGCTCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp GGCTCATGCAGAGCTGGCCCTCCTCGGTCGCCTCACTaGACAGTGACACTGTCTGTGCCAAGCAGGTGCGGG +
Preference number: 3 (lower is better)
Translates to: GSCRAGPPRSPH*TVTLSVPSRCG
Trigger: CCCGCACCTGCTTGGCACAGACAGTGTCACTGTGCAGTGAGGCGACCGAGGAGGGCCAGCTCTGCATGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp CCTCACTGCACAGTGACACTGTCTGTGCCAAGCAGGTaGGGGTACGGGTCTGCACCCCAGTGTGACCGCAGG +
Preference number: 3 (lower is better)
Translates to: PHCTVTLSVPSR*GYGSAPQCDRR
Trigger: CCTGCGGTCACACTGGGGTGCAGACCCGTACCCGCACCTGCTTGGCACAGACAGTGTCACTGTGCAGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp AGCAGTGACTCGGCCCCGGACGATGCTCCGTGTCTCTaGGCATCGTTGGCAGCTGCACTCCACAGCCACCTT +
Preference number: 3 (lower is better)
Translates to: SSDSAPDDAPCL*ASLAAALHSHL
Trigger: AAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAGCATCGTCCGGGGCCGAGTCACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp CCACGCCGGCGTAGGCCACCCCTGCTTGCCCGTTGTTaGCTCATGGCTGGTACTCTTCCTTGGACAGTGCCT +
Preference number: 3 (lower is better)
Translates to: PRRRRPPLLARC*LMAGTLPWTVP
Trigger: AGGCACTGTCCAAGGAAGAGTACCAGCCATGAGGCAACAACGGGCAAGCAGGGGTGGCCTACGCCGGCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CGCTGCTGTCTGTTCGGGTCAGCATCTTTGGTGCCTTaGCCAGCAGGTAGACAGCGGCTCCTGGAGCTGGGC +
Preference number: 3 (lower is better)
Translates to: RCCLFGSASLVP*PAGRQRLLELG
Trigger: GCCCAGCTCCAGGAGCCGCTGTCTACCTGCTGGCCAAGGCACCAAAGATGCTGACCCGAACAGACAGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp ACAGTGCCTGTAGCTGGGGACCTGGCCGGTGTGCTTTaGAGGTACTGGAAGGCACTCTGGCGGCCTACCTGC +
Preference number: 3 (lower is better)
Translates to: TVPVAGDLAGVL*RYWKALWRPTC
Trigger: GCAGGTAGGCCGCCAGAGTGCCTTCCAGTACCTCCAAAGCACACCGGCCAGGTCCCCAGCTACAGGCACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp AGCATCTCGGCACCGGATCCCATTGTCCTGCTGCCCTaGACAGGTCTTGATCGGGCAGCGGCCTACGTCGTA +
Preference number: 3 (lower is better)
Translates to: SISAPDPIVLLP*TGLDRAAAYVV
Trigger: TACGACGTAGGCCGCTGCCCGATCAAGACCTGTGCAGGGCAGCAGGACAATGGGATCCGGTGCCGAGATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp TTCTCCACAGCATCTCGGCACCGGATCCCATTGTCCTaGTGCCCTGCACAGGTCTTGATCGGGCAGCGGCCT +
Preference number: 3 (lower is better)
Translates to: FSTASRHRIPLS*CPAQVLIGQRP
Trigger: AGGCCGCTGCCCGATCAAGACCTGTGCAGGGCAGCAGGACAATGGGATCCGGTGCCGAGATGCTGTGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp GGACGATGCTCCGTGTCTCTGCGCATCGTTGGCAGCTaGACTCCACAGCCACCTTGGTGGGCAGTGTGTACC +
Preference number: 3 (lower is better)
Translates to: GRCSVSLRIVGS*TPQPPWWAVCT
Trigger: GGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAGCATCGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CTGCGCATCGTTGGCAGCTGCACTCCACAGCCACCTTaGTGGGCAGTGTGTACCCACTGCACTGGATCTCCC +
Preference number: 3 (lower is better)
Translates to: LRIVGSCTPQPP*WAVCTHCTGSP
Trigger: GGGAGATCCAGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp GTAGCTGGGGACCTGGCCGGTGTGCTTTGGAGGTACTaGAAGGCACTCTGGCGGCCTACCTGCCTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: VAGDLAGVLWRY*KALWRPTCLSA
Trigger: TGCAGAAAGGCAGGTAGGCCGCCAGAGTGCCTTCCAGTACCTCCAAAGCACACCGGCCAGGTCCCCAGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 72 bp GCACCAGCCTCTCCGTGTCCTGGGGGATGTGGAGTGTaGAGGTGCCTTTGTAGCCAGTCATGCTCACGCGGT +
Preference number: 3 (lower is better)
Translates to: APASPCPGGCGV*RCLCSQSCSRG
Trigger: ACCGCGTGAGCATGACTGGCTACAAAGGCACCTTCACACTCCACATCCCCCAGGACACGGAGAGGCTGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp GAGCACTTGCTCCAGGGAGACCAGGAACTCCAGATGTaGTCTGCATCTCCTCGCAAGGACCCTGGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: EHLLQGDQELQM*SASPRKDPGGQ
Trigger: CTGCCCACCAGGGTCCTTGCGAGGAGATGCAGAGCACATCTGGAGTTCCTGGTCTCCCTGGAGCAAGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CCCCCTCGATCTGATAGAACCGGAAGTGAGCTGCACTaGGGGGTGCCTCCTCACACGCCCGAAGGTTCTCAA +
Preference number: 3 (lower is better)
Translates to: PPRSDRTGSELH*GVPPHTPEGSQ
Trigger: TTGAGAACCTTCGGGCGTGTGAGGAGGCACCCCCCAGTGCAGCTCACTTCCGGTTCTATCAGATCGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CTTGCCCGTTGTTGCCTCATGGCTGGTACTCTTCCTTaGACAGTGCCTGTAGCTGGGGACCTGGCCGGTGTG +
Preference number: 3 (lower is better)
Translates to: LARCCLMAGTLP*TVPVAGDLAGV
Trigger: CACACCGGCCAGGTCCCCAGCTACAGGCACTGTCCAAGGAAGAGTACCAGCCATGAGGCAACAACGGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp GGCAGCTGCACTCCACAGCCACCTTGGTGGGCAGTGTGTACCCACTGCACTGGAGGTAGCTCTCTGGGGTaGGGTTGCAAGGAGTCTCAT +
Preference number: 3 (lower is better)
Translates to: GSCTPQPPWWAVCTHCTGGSSLG*GCKESH
Trigger: ATGAGACTCCTTGCAACCCAACCCCAGAGAGCTACC...TCCAGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp CTTGCTCCAGGGAGACCAGGAACTCCAGATGTGCTCTaGATCTCCTCGCAAGGACCCTGGTGGGCAGAGGAA +
Preference number: 3 (lower is better)
Translates to: LAPGRPGTPDVL*ISSQGPWWAEE
Trigger: TTCCTCTGCCCACCAGGGTCCTTGCGAGGAGATGCAGAGCACATCTGGAGTTCCTGGTCTCCCTGGAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 72 bp ACCGGATCCCATTGTCCTGCTGCCCTGCACAGGTCTTaGTCGGGCAGCGGCCTACGTCGTAGTAGAAGGAAT +
Preference number: 3 (lower is better)
Translates to: TGSHCPAALHRS*SGSGLRRSRRN
Trigger: ATTCCTTCTACTACGACGTAGGCCGCTGCCCGATCAAGACCTGTGCAGGGCAGCAGGACAATGGGATCCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp CATCAGGACACAAGCCAGGAACTCGGAACCTCCCGCTaGTGTCTGTTCGGGTCAGCATCTTTGGTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: HQDTSQELGTSR*CLFGSASLVPW
Trigger: CCAAGGCACCAAAGATGCTGACCCGAACAGACAGCAGCGGGAGGTTCCGAGTTCCTGGCTTGTGTCCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp GGATCCCATAGAGCTTCCCCACAGTCTGCCGGTGGGTaGCTCCCATGTTACGGGATCGTACATTCACCTCCA +
Preference number: 3 (lower is better)
Translates to: GSHRASPQSAGG*LPCYGIVHSPP
Trigger: TGGAGGTGAATGTACGATCCCGTAACATGGGAGGCACCCACCGGCAGACTGTGGGGAAGCTCTATGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CCAGTCATGCTCACGCGGTTATTCCCCATGTACACATaGCCAAAGCGCATGGGCTCCCCGTTGTCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: PVMLTRLFPMYT*PKRMGSPLSAA
Trigger: TGCTGCTGACAACGGGGAGCCCATGCGCTTTGGCCATGTGTACATGGGGAATAACCGCGTGAGCATGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CTGGCCGGTGTGCTTTGGAGGTACTGGAAGGCACTCTaGCGGCCTACCTGCCTTTCTGCACAGTTAAAGGTC +
Preference number: 3 (lower is better)
Translates to: LAGVLWRYWKAL*RPTCLSAQLKV
Trigger: GACCTTTAACTGTGCAGAAAGGCAGGTAGGCCGCCAGAGTGCCTTCCAGTACCTCCAAAGCACACCGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CATGGCTGGTACTCTTCCTTGGACAGTGCCTGTAGCTaGGGACCTGGCCGGTGTGCTTTGGAGGTACTGGAA +
Preference number: 3 (lower is better)
Translates to: HGWYSSLDSACS*GPGRCALEVLE
Trigger: TTCCAGTACCTCCAAAGCACACCGGCCAGGTCCCCAGCTACAGGCACTGTCCAAGGAAGAGTACCAGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 72 bp TGGGTGACCTTGGACTTCACAGCCCCAGCATCACTCTaGGCCTTACAGAAGTACTCCCCTGCTTGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: WVTLDFTAPASL*ALQKYSPAWSC
Trigger: GCAGGACCAAGCAGGGGAGTACTTCTGTAAGGCTCAGAGTGATGCTGGGGCTGTGAAGTCCAAGGTCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp CACTGCACTGGATCTCCCTCTCTTCTGTTCTGGAAATaGCGCAGCAGTTCTCCACAGCATCTCGGCACCGGA +
Preference number: 3 (lower is better)
Translates to: HCTGSPSLLFWK*RSSSPQHLGTG
Trigger: TCCGGTGCCGAGATGCTGTGGAGAACTGCTGCGGCATTTCCAGAACAGAAGAGAGGGAGATCCAGTGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp ACAGCCACCTTGGTGGGCAGTGTGTACCCACTGCACTaGATCTCCCTCTCTTCTGTTCTGGAAATGCCGCAG +
Preference number: 3 (lower is better)
Translates to: TATLVGSVYPLH*ISLSSVLEMPQ
Trigger: CTGCGGCATTTCCAGAACAGAAGAGAGGGAGATCCAGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp ACTCCACAGCCACCTTGGTGGGCAGTGTGTACCCACTaGACTGGATCTCCCTCTCTTCTGTTCTGGAAATGC +
Preference number: 3 (lower is better)
Translates to: TPQPPWWAVCTH*TGSPSLLFWKC
Trigger: GCATTTCCAGAACAGAAGAGAGGGAGATCCAGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp TCTGGGTTGAGCGACCAGAGTTTCATGGCTGGCACATaGTCTGGCATTTTGACCTGGGTCGAGTCAAGGTGG +
Preference number: 3 (lower is better)
Translates to: SGLSDQSFMAGT*SGILTWVESRW
Trigger: CCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCCATGAAACTCTGGTCGCTCAACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp GTACTGGAAGGCACTCTGGCGGCCTACCTGCCTTTCTaGACAGTTAAAGGTCAGGGCAACTCCCACATTGCT +
Preference number: 3 (lower is better)
Translates to: VLEGTLAAYLPF*TVKGQGNSHIA
Trigger: AGCAATGTGGGAGTTGCCCTGACCTTTAACTGTGCAGAAAGGCAGGTAGGCCGCCAGAGTGCCTTCCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp AATGGCATCCAGCCGCTCATAGTCACCCTGCCCACCTaGGTGGTCGATGTTAAACCATGTTGTCCACTCTCC +
Preference number: 3 (lower is better)
Translates to: NGIQPLIVTLPT*VVDVKPCCPLS
Trigger: GGAGAGTGGACAACATGGTTTAACATCGACCACCCAGGTGGGCAGGGTGACTATGAGCGGCTGGATGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CCAGATGTGCTCTGCATCTCCTCGCAAGGACCCTGGTaGGCAGAGGAAGCGCACGGTATAATTGGAACAGTT +
Preference number: 3 (lower is better)
Translates to: PDVLCISSQGPW*AEEAHGIIGTV
Trigger: AACTGTTCCAATTATACCGTGCGCTTCCTCTGCCCACCAGGGTCCTTGCGAGGAGATGCAGAGCACATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp TCCTGTGTCTGGGTTGAGCGACCAGAGTTTCATGGCTaGCACATGCTCTGGCATTTTGACCTGGGTCGAGTC +
Preference number: 3 (lower is better)
Translates to: SCVWVERPEFHG*HMLWHFDLGRV
Trigger: GACTCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCCATGAAACTCTGGTCGCTCAACCCAGACACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp TTTGGATGGGATCTCCAGCTCAGCCACAGGGTCTTCACCAATCACCTCTCCCAGGCGCTTCCCTTCTTGTaGAAGGGCAGCACTTTGGTT +
Preference number: 3 (lower is better)
Translates to: FGWDLQLSHRVFTNHLSQALPFL*KGSTLV
Trigger: AACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGC...CTGGGAGAGGTGATTGGTGAAGACCCTGTGGCTGAGCTGGAGATCCCATCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp GTTAAAGGTCAGGGCAACTCCCACATTGCTCTTCATGATTCTGGAGGAGCCATCGCCAGGGGAAGGTGGTaGACCAGGTACTCGTGCAAC +
Preference number: 3 (lower is better)
Translates to: VKGQGNSHIALHDSGGAIARGRW*TRYSCN
Trigger: GTTGCACGAGTACCTGGTCAACCACCTTCCCCTGGC...GATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 72 bp ACCAGAGTTTCATGGCTGGCACATGCTCTGGCATTTTaGCCTGGGTCGAGTCAAGGTGGACCTTCACCTTGC +
Preference number: 3 (lower is better)
Translates to: TRVSWLAHALAF*PGSSQGGPSPC
Trigger: GCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCCATGAAACTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp GTGTGTTGTTGTGGTACCAGAAGTACTTGTCCGGACTaGGTTTCCCCGTGGCTTTGCAGCACAGAGACACAC +
Preference number: 3 (lower is better)
Translates to: VCCCGTRSTCPD*VSPWLCSTETH
Trigger: GTGTGTCTCTGTGCTGCAAAGCCACGGGGAAACCCAGTCCGGACAAGTACTTCTGGTACCACAACAACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp GTCATGGGGCAGCCGGATAAGGTAGCTCTCTGGGGTTaGGTTGCAAGGAGTCTCATCATGTGCAATGACAGT +
Preference number: 3 (lower is better)
Translates to: VMGQPDKVALWG*VARSLIMCNDS
Trigger: ACTGTCATTGCACATGATGAGACTCCTTGCAACCCAACCCCAGAGAGCTACCTTATCCGGCTGCCCCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp GTGATGGGCTCTTTCTGCCGAAGCATCTTGATCTCGTaGAACACTGCGCTTCCCTTCTTGTTGAAGGGCAGC +
Preference number: 3 (lower is better)
Translates to: VMGSFCRSILIS*NTALPFLLKGS
Trigger: GCTGCCCTTCAACAAGAAGGGAAGCGCAGTGTTCCACGAGATCAAGATGCTTCGGCAGAAAGAGCCCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp AGTTTCATGGCTGGCACATGCTCTGGCATTTTGACCTaGGTCGAGTCAAGGTGGACCTTCACCTTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: SFMAGTCSGILT*VESRWTFTLPA
Trigger: TGCTGGCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCCATGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp GTTGAGCGACCAGAGTTTCATGGCTGGCACATGCTCTaGCATTTTGACCTGGGTCGAGTCAAGGTGGACCTT +
Preference number: 3 (lower is better)
Translates to: VERPEFHGWHML*HFDLGRVKVDL
Trigger: AAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCCATGAAACTCTGGTCGCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp CTTGAAATCCCCTTCCTCTTCCCACAGTCCTGTGTCTaGGTTGAGCGACCAGAGTTTCATGGCTGGCACATG +
Preference number: 3 (lower is better)
Translates to: LEIPFLFPQSCV*VERPEFHGWHM
Trigger: CATGTGCCAGCCATGAAACTCTGGTCGCTCAACCCAGACACAGGACTGTGGGAAGAGGAAGGGGATTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp GTCTTTTTAACCCGTGGATCCTCATGGTCTGTCCGACGGTATTTAAGTTTGTTGCGGCACCGGATCCCATaGTCCTGCTGCCCTGCACAG +
Preference number: 3 (lower is better)
Translates to: VFLTRGSSWSVRRYLSLLRHRIP*SCCPAQ
Trigger: CTGTGCAGGGCAGCAGGACAATGGGATCCGGTGCCG...CAACAAACTTAAATACCGTCGGACAGACCATGAGGATCCACGGGTTAAAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp GTATACTCGCTGGTGTCATTGTTGACTGCCAGGGGAAGGTGGTTGACCAGGTACAGGTGGACCTTCACCTaGCCAGCATTAAGTGACTCG +
Preference number: 3 (lower is better)
Translates to: VYSLVSLLTARGRWLTRYRWTFT*PALSDS
Trigger: CGAGTCACTTAATGCTGGCAAGGTGAAGGTCCACCT...GTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp ATACTCGCTGGTGTCATTGTTGACTGCCAGGGGAAGGTGGTTGACCAGGTACTCCACAACTCCCTGAATTaGCTCACTGGGCAGGAACCT +
Preference number: 3 (lower is better)
Translates to: ILAGVIVDCQGKVVDQVLHNSLN*LTGQEP
Trigger: AGGTTCCTGCCCAGTGAGCAAATTCAGGGAGTTGTG...GAGTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp TTGACTGCCAGGGGAAGGTGGTTGACCAGGTACTCGTaGAACATAGAGTTAACACTAGCTCGATGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: LTARGRWLTRYS*NIELTLARWQL
Trigger: CAGCTGCCATCGAGCTAGTGTTAACTCTATGTTGCACGAGTACCTGGTCAACCACCTTCCCCTGGCAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp TTGCAAGGAGTCTCATCATGTGCAATGACAGTGAGCTaGGTGACCTTGGACTTCACAGCCCCAGCATCACTC +
Preference number: 3 (lower is better)
Translates to: LQGVSSCAMTVS*VTLDFTAPASL
Trigger: GAGTGATGCTGGGGCTGTGAAGTCCAAGGTCACCCAGCTCACTGTCATTGCACATGATGAGACTCCTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp AAAGCAGTCATGGGGCAGCCGGATAAGGTAGCTCTCTaGGGTTGGGTTGCAAGGAGTCTCATCATGTGCAAT +
Preference number: 3 (lower is better)
Translates to: KAVMGQPDKVAL*GWVARSLIMCN
Trigger: ATTGCACATGATGAGACTCCTTGCAACCCAACCCCAGAGAGCTACCTTATCCGGCTGCCCCATGACTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp GTGTCTCCTTCATCATTGATGAAGTTGAGGTCACTTTaGGCAGCTGTGGCCGTCGAGATGTTCCGAGGATCC +
Preference number: 3 (lower is better)
Translates to: VSPSSLMKLRSL*AAVAVEMFRGS
Trigger: GGATCCTCGGAACATCTCGACGGCCACAGCTGCCCAAAGTGACCTCAACTTCATCAATGATGAAGGAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp GCCTCCCATGTTACGGGATCGTACATTCACCTCCAGTaGCCCCACAATCTTAACCTTGATATAGCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: ASHVTGSYIHLQ*PHNLNLDIAGP
Trigger: AGGGCCTGCTATATCAAGGTTAAGATTGTGGGGCCACTGGAGGTGAATGTACGATCCCGTAACATGGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp AAAGGTCAGGGCAACTCCCACATTGCTCTTCATGATTCTGGAGGAGCCATCGGAAGTCCTGTGTCTGGGTaGAGCGACCAGAGTTTCATG +
Preference number: 3 (lower is better)
Translates to: KGQGNSHIALHDSGGAIGSPVSG*SDQSFM
Trigger: CATGAAACTCTGGTCGCTCAACCCAGACACAGGACT...TCCGATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp GAAGGAATTGCTGGCGTTCTGAAAGCAGTCATGGGGCAGCCGGATAAGGTAGCTGGGGCAAACTTGGTCTaGGTGATTTTCAGGATGGTT +
Preference number: 3 (lower is better)
Translates to: EGIAGVLKAVMGQPDKVAGANLV*VIFRMV
Trigger: AACCATCCTGAAAATCACCAAGACCAAGTTTGCCCC...AGCTACCTTATCCGGCTGCCCCATGACTGCTTTCAGAACGCCAGCAATTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp CACATGCTCTGGCATTTTGACCTGGGTCGAGTCAAGGTGGACCTTCACCTTGCCGACTTCAGGCTAGTCTaGGGCATCGTGATCATAATT +
Preference number: 3 (lower is better)
Translates to: HMLWHFDLGRVKVDLHLADFRLV*GIVIII
Trigger: AATTATGATCACGATGCCCAAGACTAGCCTGAAGTC...GGCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp TTGAAGGGCAGCACTTTGGTTGTGTTGACAAACTTCTaGAGCCTGTCCACAAATGTGAGCACCAGCCTCTCC +
Preference number: 3 (lower is better)
Translates to: LKGSTLVVLTNF*SLSTNVSTSLS
Trigger: GGAGAGGCTGGTGCTCACATTTGTGGACAGGCTGCAGAAGTTTGTCAACACAACCAAAGTGCTGCCCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp CTCTTTCTGCCGAAGCATCTTGATCTCGTGGAACACTaGGCTTCCCTTCTTGTTGAAGGGCAGCACTTTGGT +
Preference number: 3 (lower is better)
Translates to: LFLPKHLDLVEH*ASLLVEGQHFG
Trigger: ACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGCAGTGTTCCACGAGATCAAGATGCTTCGGCAGAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp ACATGCTCTGGCATTTTGACCTGGGTCGAGTCAAGGTaGACCTTCACCTTGCCAGCATTAAGTGACTCGGAA +
Preference number: 3 (lower is better)
Translates to: TCSGILTWVESR*TFTLPALSDSE
Trigger: TTCCGAGTCACTTAATGCTGGCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp GTCTTTTTAACCCGTGGATCCTCATGGTCTGTCCGACGGTATTTAAGTTTGTTGGAAGTACTCCCCTGCTaGGTCCTGCTGCAGGTTCCT +
Preference number: 3 (lower is better)
Translates to: VFLTRGSSWSVRRYLSLLEVLPC*VLLQVP
Trigger: AGGAACCTGCAGCAGGACCAAGCAGGGGAGTACTTC...CAACAAACTTAAATACCGTCGGACAGACCATGAGGATCCACGGGTTAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 72 bp GGTCTCTGCCCTCACAAACTCCGCATTGATGGTAGCTaGCTTCAGGCTAGTCTTGGGCATCGTGATCATAAT +
Preference number: 3 (lower is better)
Translates to: GLCPHKLRIDGS*LQASLGHRDHN
Trigger: ATTATGATCACGATGCCCAAGACTAGCCTGAAGTCAGCTACCATCAATGCGGAGTTTGTGAGGGCAGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 72 bp CTCAAAGGCATAGATAGGCCCATTGCTCTCCTCAGCTaGGTTGGGCCTTGGTTTGGCCATACTGATTTGGAA +
Preference number: 3 (lower is better)
Translates to: LKGIDRPIALLS*VGPWFGHTDLE
Trigger: TTCCAAATCAGTATGGCCAAACCAAGGCCCAACTCAGCTGAGGAGAGCAATGGGCCTATCTATGCCTTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp TCAGCTGAGTTGGGCCTTGGTTTGGCCATACTGATTTaGAAAGCCGTCTTTTTAACCCGTGGATCCTCATGG +
Preference number: 3 (lower is better)
Translates to: SAELGLGLAILI*KAVFLTRGSSW
Trigger: CCATGAGGATCCACGGGTTAAAAAGACGGCTTTCCAAATCAGTATGGCCAAACCAAGGCCCAACTCAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp TACTCGCTGGTGTCATTGTTGACTGCCAGGGGAAGGTaGTTGACCAGGTACTCGTGCAACATAGAGTTAACA +
Preference number: 3 (lower is better)
Translates to: YSLVSLLTARGR*LTRYSCNIELT
Trigger: TGTTAACTCTATGTTGCACGAGTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp AACATAGAGTTAACACTAGCTCGATGGCAGCTGCCCTGGGGGATAACCTTTACTCTCACAAACTCCGCATaGATGGTAGCTGACTTCAGG +
Preference number: 3 (lower is better)
Translates to: NIELTLARWQLPWGITFTLTNSA*MVADFR
Trigger: CCTGAAGTCAGCTACCATCAATGCGGAGTTTGTGAG...AGTAAAGGTTATCCCCCAGGGCAGCTGCCATCGAGCTAGTGTTAACTCTATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp GTGCCTCCCATGTTACGGGATCGTACATTCACCTCCAGTGGCCCCACAATCTTAGTGTCTCCTTCATCATaGATGAAGTTGAGGTCACTT +
Preference number: 3 (lower is better)
Translates to: VPPMLRDRTFTSSGPTILVSPSS*MKLRSL
Trigger: AAGTGACCTCAACTTCATCAATGATGAAGGAGACAC...TAAGATTGTGGGGCCACTGGAGGTGAATGTACGATCCCGTAACATGGGAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp AGGTACTCGTGCAACATAGAGTTAACACTAGCTCGATaGCAGCTGCCCTGGGGGATAACCTTTACTAATGTG +
Preference number: 3 (lower is better)
Translates to: RYSCNIELTLAR*QLPWGITFTNV
Trigger: CACATTAGTAAAGGTTATCCCCCAGGGCAGCTGCCATCGAGCTAGTGTTAACTCTATGTTGCACGAGTACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp TTCATTGAAAGGAACTGTGTTATAGTCATAGCGATCCCCCTCGATCTGATAGAAGGTTTCCCCGTGGCTTaGCAGCACAGAGACACACTC +
Preference number: 3 (lower is better)
Translates to: FIERNCVIVIAIPLDLIEGFPVA*QHRDTL
Trigger: GAGTGTGTCTCTGTGCTGCAAAGCCACGGGGAAACC...TTCTATCAGATCGAGGGGGATCGCTATGACTATAACACAGTTCCTTTCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp GTCTTTTTAACCCGTGGATCCTCATGGTCTGTCCGACGGTATTTAAGTTTGTTGACTGCGCTTCCCTTCTaGTTGAAGGGCAGCACTTTG +
Preference number: 3 (lower is better)
Translates to: VFLTRGSSWSVRRYLSLLTALPF*LKGSTL
Trigger: CAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGCAGT...CAACAAACTTAAATACCGTCGGACAGACCATGAGGATCCACGGGTTAAAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp AACATAGAGTTAACACTAGCTCGATGGCAGCTGCCCTGGGGGATAACCTTTACTCTTCTCCAGAAAGGCTaGCCAAGACATAGACAGAGT +
Preference number: 3 (lower is better)
Translates to: NIELTLARWQLPWGITFTLLQKG*PRHRQS
Trigger: ACTCTGTCTATGTCTTGGCAAGCCTTTCTGGAGAAG...AGTAAAGGTTATCCCCCAGGGCAGCTGCCATCGAGCTAGTGTTAACTCTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 72 bp GACAGTCTGTGCATCAGTCTCACGACAGCTGTCACATaGGATGGACAGAAAGGACTAAGAACCACAAGACTT +
Preference number: 3 (lower is better)
Translates to: DSLCISLTTAVT*DGQKGLRTTRL
Trigger: AAGTCTTGTGGTTCTTAGTCCTTTCTGTCCATCTCATGTGACAGCTGTCGTGAGACTGATGCACAGACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR-3UTR CAA 90 bp CTTTCATCTCAGGGTTCATTACAATGTATGGGGTCTCTGCCCTCACAAACTCCGATAATTGGGGCAAACTaGGTCTTGGTGATTTTCAGG +
Preference number: 3 (lower is better)
Translates to: LSSQGSLQCMGSLPSQTPIIGAN*VLVIFR
Trigger: CCTGAAAATCACCAAGACCAAGTTTGCCCCAATTAT...CGGAGTTTGTGAGGGCAGAGACCCCATACATTGTAATGAACCCTGAGATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CCA 72 bp GGCCATACTGATTTGGAAAGCCGTCTTTTTAACCCGTaGATCCTCATGGTCTGTCCGACGGTATTTAAGTTT +
Preference number: 3 (lower is better)
Translates to: GHTDLESRLFNP*ILMVCPTVFKF
Trigger: AAACTTAAATACCGTCGGACAGACCATGAGGATCCACGGGTTAAAAAGACGGCTTTCCAAATCAGTATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR GCA 72 bp GATGGACAGAAAGGACTAAGAACCACAAGACTTAGTTaGTCAGAGGTTGTTGAGCAACACCAGAAAATCTCA +
Preference number: 3 (lower is better)
Translates to: DGQKGLRTTRLS*SEVVEQHQKIS
Trigger: TGAGATTTTCTGGTGTTGCTCAACAACCTCTGAGCAACTAAGTCTTGTGGTTCTTAGTCCTTTCTGTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR TCA 72 bp TTCCTTATTCACCACCATTTATATATATATGGACTGTaGCAGAGACTTTGCTTACATCTTGTGGAACATGGC +
Preference number: 3 (lower is better)
Translates to: FLIHHHLYIYGL*QRLCLHLVEHG
Trigger: GCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGTGAATAAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
3UTR CAA 72 bp TCGGCCCCGGACGATGCTCCGTGTCTCTGCGCATCGTaGGCAGCTGCACTCCACAGCCACCTTGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SAPDDAPCLCAS*AAALHSHLGGQ
Trigger: CTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGAGACACGGAGCATCGTCCGGGGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp GACAGTGCCTGTAGCTGGGGACCTGGCCGGTGTGCTTaGGAGGTACTGGAAGGCACTCTGGCGGCCTACCTG +
Preference number: 4 (lower is better)
Translates to: DSACSWGPGRCA*EVLEGTLAAYL
Trigger: CAGGTAGGCCGCCAGAGTGCCTTCCAGTACCTCCAAAGCACACCGGCCAGGTCCCCAGCTACAGGCACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp GGCCCATGCTTCCACGCCGGCGTAGGCCACCCCTGCTaGCCCGTTGTTGCCTCATGGCTGGTACTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GPCFHAGVGHPC*PVVASWLVLFL
Trigger: AAGGAAGAGTACCAGCCATGAGGCAACAACGGGCAAGCAGGGGTGGCCTACGCCGGCGTGGAAGCATGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp CAGCAGTTCTCCACAGCATCTCGGCACCGGATCCCATaGTCCTGCTGCCCTGCACAGGTCTTGATCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QQFSTASRHRIP*SCCPAQVLIGQ
Trigger: CTGCCCGATCAAGACCTGTGCAGGGCAGCAGGACAATGGGATCCGGTGCCGAGATGCTGTGGAGAACTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp TCTGCGCATCGTTGGCAGCTGCACTCCACAGCCACCTaGGTGGGCAGTGTGTACCCACTGCACTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: SAHRWQLHSTAT*VGSVYPLHWIS
Trigger: GGAGATCCAGTGCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp GGATCCAGCAGTGTGTTGTTGTGGTACCAGAAGTACTaGTCCGGACTGGGTTTCCCCGTGGCTTTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GSSSVLLWYQKY*SGLGFPVALQH
Trigger: GTGCTGCAAAGCCACGGGGAAACCCAGTCCGGACAAGTACTTCTGGTACCACAACAACACACTGCTGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp AGGGGTGCCAGCATAGTATACTCGCTGGTGTCATTGTaGACTGCCAGGGGAAGGTGGTTGACCAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: RGASIVYSLVSL*TARGRWLTRYS
Trigger: CGAGTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTATACTATGCTGGCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp GACCAGAGTTTCATGGCTGGCACATGCTCTGGCATTTaGACCTGGGTCGAGTCAAGGTGGACCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: DQSFMAGTCSGI*TWVESRWTFTL
Trigger: CAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCCATGAAACTCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
CDS-3UTR TCA 90 bp CTTTCATCTCAGGGTTCATTACAATGTATGGGGTCTCTGCCCTCACAAACTCCGTCCCCAGCACGGTGGTaGCCTCAAGGACCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LSSQGSLQCMGSLPSQTPSPARW*PQGPGK
Trigger: CTTTCCTGGTCCTTGAGGTCACCACCGTGCTGGGGA...CGGAGTTTGTGAGGGCAGAGACCCCATACATTGTAATGAACCCTGAGATGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
CDS-3UTR CCA 90 bp GTGCCTCCCATGTTACGGGATCGTACATTCACCTCCAGTGGCCCCACAATCTTAGTCCTCTTCACAGGCTaGACTCTTCTCACTGACTGG +
Preference number: 4 (lower is better)
Translates to: VPPMLRDRTFTSSGPTILVLFTG*TLLTDW
Trigger: CCAGTCAGTGAGAAGAGTCCAGCCTGTGAAGAGGAC...TAAGATTGTGGGGCCACTGGAGGTGAATGTACGATCCCGTAACATGGGAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
CDS-3UTR CCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAACTGCCGTGGACCACCTaGCCAGTGCTGCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKLPWTT*PVLPAG
Trigger: GCCTGCGGGCAGCACTGGCCAGGTGGTCCACGGCAG...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
3UTR CAA 72 bp GCTTCCAACGTGATGGGCTCTTTCTGCCGAAGCATCTaGATCTCGTGGAACACTGCGCTTCCCTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: ASNVMGSFCRSI*ISWNTALPFLL
Trigger: CAACAAGAAGGGAAGCGCAGTGTTCCACGAGATCAAGATGCTTCGGCAGAAAGAGCCCATCACGTTGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
CDS-3UTR CCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAAGCGGCTCCTGGAGCTaGGCCACCTCCAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKSGSWS*ATSREG
Trigger: TCCCTCCCTGGAGGTGGCCCAGCTCCAGGAGCCGCT...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp CTTTCATCTCAGGGTTCATTACAATGTATGGGGTCTCTGCCCTCACAAACTCCGCTGGACTCTTCTCACTaGCTGGGCAAGCATCGTCTG +
Preference number: 4 (lower is better)
Translates to: LSSQGSLQCMGSLPSQTPLDSSH*LGKHRL
Trigger: CAGACGATGCTTGCCCAGTCAGTGAGAAGAGTCCAG...CGGAGTTTGTGAGGGCAGAGACCCCATACATTGTAATGAACCCTGAGATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
CDS-3UTR TCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAGTCTGCACCCCAGTGTaGCCGCAGGCAGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKVCTPV*PQAAEH
Trigger: GTGCTCAGCTGCCTGCGGTCACACTGGGGTGCAGAC...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
3UTR CAA 72 bp ACAATGTATGGGGTCTCTGCCCTCACAAACTCCGCATaGATGGTAGCTGACTTCAGGCTAGTCTTGGGCATC +
Preference number: 4 (lower is better)
Translates to: TMYGVSALTNSA*MVADFRLVLGI
Trigger: GATGCCCAAGACTAGCCTGAAGTCAGCTACCATCAATGCGGAGTTTGTGAGGGCAGAGACCCCATACATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp AGTGTCTCCTTCATCATTGATGAAGTTGAGGTCACTTaGGGCAGCTGTGGCCGTCGAGATGTTCCGAGGATC +
Preference number: 4 (lower is better)
Translates to: SVSFIIDEVEVT*GSCGRRDVPRI
Trigger: GATCCTCGGAACATCTCGACGGCCACAGCTGCCCAAAGTGACCTCAACTTCATCAATGATGAAGGAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp ATTTTGACCTGGGTCGAGTCAAGGTGGACCTTCACCTaGCCAGCATTAAGTGACTCGGAAGTGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: ILTWVESRWTFT*PALSDSEVASS
Trigger: AGATGAGGCCACTTCCGAGTCACTTAATGCTGGCAAGGTGAAGGTCCACCTTGACTCGACCCAGGTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
CDS-3UTR GCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAGCCCTCACGGGGACTaGCGTGGACCACCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWSPHGD*RGPPGQ
Trigger: CTGGCCAGGTGGTCCACGGCAGTCCCCGTGAGGGCT...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAGCTTCCCCACAGTCTaGCGGTGGGTGCCTCCCATG +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKSFPTV*RWVPPM
Trigger: CATGGGAGGCACCCACCGGCAGACTGTGGGGAAGCT...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAATCGCAAGGACCCTGGTaGGCAGAGGAAGCGCACGGT +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKSQGPW*AEEAHG
Trigger: ACCGTGCGCTTCCTCTGCCCACCAGGGTCCTTGCGA...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAATCCTCGCAAGGACCCTaGTGGGCAGAGGAAGCGCAC +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKSSQGP*WAEEAH
Trigger: GTGCGCTTCCTCTGCCCACCAGGGTCCTTGCGAGGA...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp GTCTTTTTAACCCGTGGATCCTCATGGTCTGTCCGACGGTATTTAAGTTTGTTGACAGCATTCCTCTCCTaGGAGTCGGCAGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VFLTRGSSWSVRRYLSLLTAFLS*ESAGLA
Trigger: TGCCAAGCCTGCCGACTCCCAGGAGAGGAATGCTGT...CAACAAACTTAAATACCGTCGGACAGACCATGAGGATCCACGGGTTAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp AACACTGCGCTTCCCTTCTTGTTGAAGGGCAGCACTTaGGTTGTGTTGACAAACTTCTGCAGCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: NTALPFLLKGST*VVLTNFCSLST
Trigger: TGTGGACAGGCTGCAGAAGTTTGTCAACACAACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGCAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp CTAAGGGGAAAAGTGTCTCCTTCATCATTGATGAAGTaGAGGTCACTTTGGGCAGCTGTGGCCGTCGAGATG +
Preference number: 4 (lower is better)
Translates to: LRGKVSPSSLMK*RSLWAAVAVEM
Trigger: CATCTCGACGGCCACAGCTGCCCAAAGTGACCTCAACTTCATCAATGATGAAGGAGACACTTTTCCCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp TCTACACGGTCTTGGTCATACAGCATTCCACTGCACTaGAACTCCAGGCAGGCAGATGAGACATTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: STRSWSYSIPLH*NSRQADETLGW
Trigger: CCAACCTAATGTCTCATCTGCCTGCCTGGAGTTCAAGTGCAGTGGAATGCTGTATGACCAAGACCGTGTAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp TCGCTGGTGTCATTGTTGACTGCCAGGGGAAGGTGGTaGACCAGGTACTCGTGCAACATAGAGTTAACACTA +
Preference number: 4 (lower is better)
Translates to: SLVSLLTARGRW*TRYSCNIELTL
Trigger: TAGTGTTAACTCTATGTTGCACGAGTACCTGGTCAACCACCTTCCCCTGGCAGTCAACAATGACACCAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp CTTTCTGCACAGTTAAAGGTCAGGGCAACTCCCACATaGCTCTTCATGATTCTGGAGGAGCCATCGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LSAQLKVRATPT*LFMILEEPSEV
Trigger: CACTTCCGATGGCTCCTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCTGACCTTTAACTGTGCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
CDS-3UTR TCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGTCCCCAGCACGGTGGTaGCCTCAAGGACCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKSPARW*PQGPGK
Trigger: CTTTCCTGGTCCTTGAGGTCACCACCGTGCTGGGGA...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGGTCTCTGCTCCCTGTTaGGGCACCAGAAGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKVSAPC*GTRSPH
Trigger: GTGAGGGCTTCTGGTGCCTCAACAGGGAGCAGAGAC...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAATGGCCCCGTGAAGCATaGAGTCCTGGCACATGCAGG +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKWPREA*SPGTCR
Trigger: CCTGCATGTGCCAGGACTTCATGCTTCACGGGGCCA...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAGGGAGATGGCCCCGTaGAGCATGAAGTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKREMAP*SMKSWH
Trigger: GTGCCAGGACTTCATGCTTCACGGGGCCATCTCCCT...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGCCTGCTTGGTCCTGCTaGAGGTTCCTCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKPAWSC*RFLSTS
Trigger: GCTGGTGCTGAGGAACCTGCAGCAGGACCAAGCAGG...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAATCCCCTGCTTGGTCCTaGTGCAGGTTCCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKSPAWS*CRFLST
Trigger: GGTGCTGAGGAACCTGCAGCAGGACCAAGCAGGGGA...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp GAACACTGCGCTTCCCTTCTTGTTGAAGGGCAGCACTTTGGTTGTGTTGACAAAACTCTTCTCACTGACTaGGCAAGCATCGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: EHCASLLVEGQHFGCVDKTLLTD*ASIVCL
Trigger: GAGACAGACGATGCTTGCCCAGTCAGTGAGAAGAGT...TTTGTCAACACAACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGCAGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
CDS-3UTR CCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAACATGGCCAAAGCGCATaGGCTCCCCGTTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKHGQSA*APRCQQ
Trigger: CTGCTGACAACGGGGAGCCCATGCGCTTTGGCCATG...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAGGCCCTGAACTCCATTaGCTTGGGCCACCATGCCAG +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKGPELH*LGPPCQ
Trigger: CTGGCATGGTGGCCCAAGCCAATGGAGTTCAGGGCC...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
3UTR CAA 72 bp AACTCCGCATTGATGGTAGCTGACTTCAGGCTAGTCTaGGGCATCGTGATCATAATTGGGGCAAACTTGGTC +
Preference number: 4 (lower is better)
Translates to: NSALMVADFRLV*GIVIIIGANLV
Trigger: GACCAAGTTTGCCCCAATTATGATCACGATGCCCAAGACTAGCCTGAAGTCAGCTACCATCAATGCGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
3UTR CAA 72 bp AGCATCTTGATCTCGTGGAACACTGCGCTTCCCTTCTaGTTGAAGGGCAGCACTTTGGTTGTGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: SILISWNTALPF*LKGSTLVVLTN
Trigger: GTTTGTCAACACAACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGCAGTGTTCCACGAGATCAAGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
CDS-3UTR TCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAACGCCTCACTGCACAGTaGCACTGTCTGTGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKRLTAQ*HCLCQA
Trigger: TGCTTGGCACAGACAGTGTCACTGTGCAGTGAGGCG...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTCGTTGTCAGCAGCAGTaGCTCGGCCCCGGACGATGC +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVRCQQQ*LGPGRC
Trigger: GCATCGTCCGGGGCCGAGTCACTGCTGCTGACAACG...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAGGGGGATGTGGAGTGTaGAGGTGCCTTTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKGGCGV*RCLCSQ
Trigger: CTGGCTACAAAGGCACCTTCACACTCCACATCCCCC...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAGCCTGTCCACAAATGTaGGCACCAGCCTCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKACPQM*APASPC
Trigger: ACACGGAGAGGCTGGTGCTCACATTTGTGGACAGGC...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTCCACCTGGCCAGTGCTaGCCGCAGGCATCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVPPGQC*PQASSQ
Trigger: CTGACTGGATGCCTGCGGGCAGCACTGGCCAGGTGG...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTGGACCACCTGGCCAGTaGTGCCCGCAGGCATCCAGT +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVGPPGQ*CPQASS
Trigger: ACTGGATGCCTGCGGGCAGCACTGGCCAGGTGGTCC...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGTTCTGGCCTGGTCTCTaGTCCCTGTTGAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKFWPGL*SLLRHQ
Trigger: CTGGTGCCTCAACAGGGAGCAGAGACCAGGCCAGAA...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAGGCAGCTGAGCACTTaGTCCAGGGAGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKRQLST*SRETRN
Trigger: GTTCCTGGTCTCCCTGGAGCAAGTGCTCAGCTGCCT...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGCGGATCCCATTGTCCTaGTGCCCTGCACAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKRIPLS*CPAQVL
Trigger: CAAGACCTGTGCAGGGCAGCAGGACAATGGGATCCG...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATCTCCGGGACTCTCCTaGGAGTCGGCAGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLSPGLS*ESAGLA
Trigger: TGCCAAGCCTGCCGACTCCCAGGAGAGTCCCGGAGA...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGCAGGCATCCAGTCAGTaGTCCGGGCCTCTAGCCGCA +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWQASSQ*SGPLAA
Trigger: TGCGGCTAGAGGCCCGGACCACTGACTGGATGCCTG...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTACAAGCTGTGCAGGCCTaGCTCATGCAGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLQAVQA*LMQSWP
Trigger: GGGCCAGCTCTGCATGAGCCAGGCCTGCACAGCTTG...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAGCCTCTCCGTGTCCTaGGGGATGTGGAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKSLSVS*GMWSVK
Trigger: CTTCACACTCCACATCCCCCAGGACACGGAGAGGCT...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAACTGGCCGGTGTGCTTTaGAGGTACTGGAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKLAGVL*RYWKAL
Trigger: GAGTGCCTTCCAGTACCTCCAAAGCACACCGGCCAG...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGGACAGTGCCTGTAGCTaGGGACCTGGCCGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWDSACS*GPGRCA
Trigger: AGCACACCGGCCAGGTCCCCAGCTACAGGCACTGTC...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAACTGGACTCTTCTCACTaGCTGGGCAAGCATCGTCTG +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKLDSSH*LGKHRL
Trigger: CAGACGATGCTTGCCCAGTCAGTGAGAAGAGTCCAG...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTGTGACCGCAGGCAGCTaGGCACTTGCTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVVTAGS*ALAPGR
Trigger: TCTCCCTGGAGCAAGTGCTCAGCTGCCTGCGGTCAC...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAGTCCTGTGTCTGGGTTaGGCGACCAGAGTTTCATGG +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKVLCLG*ATRVSW
Trigger: CCATGAAACTCTGGTCGCTCAACCCAGACACAGGAC...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAATTGCTCTCCTCAGCTaGGTTGGGCCTTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKIALLS*VGPWFG
Trigger: GCCAAACCAAGGCCCAACTCAGCTGAGGAGAGCAAT...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGGCATTCCACTGCACTTaGACTCCAGGCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKAFHCT*TPGRQM
Trigger: CATCTGCCTGCCTGGAGTTCAAGTGCAGTGGAATGC...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAGGTCAGCATCTTTGGTaGCTTGGCCAGCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKGQHLW*LGQQVD
Trigger: GTCTACCTGCTGGCCAAGGCACCAAAGATGCTGACC...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGCGCATCGTTGGCAGCTaGACTCCACAGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWRIVGS*TPQPPW
Trigger: CCAAGGTGGCTGTGGAGTGCAGCTGCCAACGATGCG...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGTGGCTTGGGCCACCATaGCAGGTAGTCTTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKWLGPP*QVVFSP
Trigger: TGGACTGAAGACTACCTGGCATGGTGGCCCAAGCCA...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAGGGACCTGGCCGGTGTaGTTTGGAGGTACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLGTWPV*FGGTGR
Trigger: CCTTCCAGTACCTCCAAAGCACACCGGCCAGGTCCC...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAGACTGGGTTTCCCCGTaGCTTTGCAGCACAGAGACA +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKDWVSP*LCSTET
Trigger: TGTCTCTGTGCTGCAAAGCCACGGGGAAACCCAGTC...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGCCACAGCCACCTTGGTaGGCAGTGTGTACCCACTGC +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWPQPPW*AVCTHC
Trigger: GCAGTGGGTACACACTGCCCACCAAGGTGGCTGTGG...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAATGGGTCGAGTCAAGGTaGACCTTCACCTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKWVESR*TFTLPA
Trigger: TGCTGGCAAGGTGAAGGTCCACCTTGACTCGACCCA...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAATACTGGAAGGCACTCTaGCGGCCTACCTGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKYWKAL*RPTCLS
Trigger: AGAAAGGCAGGTAGGCCGCCAGAGTGCCTTCCAGTA...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGCGCATTGATGGTAGCTaGCTTCAGGCTAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKRIDGS*LQASLG
Trigger: CCCAAGACTAGCCTGAAGTCAGCTACCATCAATGCG...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAACTTGCCAGCATTAAGTaGCTCGGAAGTGGCCTCATC +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKLASIK*LGSGLI
Trigger: GATGAGGCCACTTCCGAGTCACTTAATGCTGGCAAG...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAACATGCTCTGGCATTTTaGCCTGGGTCGAGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKHALAF*PGSSQG
Trigger: ACCTTGACTCGACCCAGGTCAAAATGCCAGAGCATG...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAACTCCAGGCAGGCAGATaGGACATTAGGTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKLQAGR*DIRLVS
Trigger: AGAGACCAACCTAATGTCTCATCTGCCTGCCTGGAG...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAACAGAAGTACTCCCCTaGTTGGTCCTGCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKTEVLP*LVLLQV
Trigger: AACCTGCAGCAGGACCAAGCAGGGGAGTACTTCTGT...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATCCCATTGTCCTGCTaGCCTGCACAGGTCTTGATC +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKIPLSC*PAQVLI
Trigger: GATCAAGACCTGTGCAGGGCAGCAGGACAATGGGAT...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGGGTGTCATTGTTGACTaGCAGGGGAAGGTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKGVIVD*QGKVVD
Trigger: GTCAACCACCTTCCCCTGGCAGTCAACAATGACACC...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAGGAGCCATCGGAAGTaGCATCAAAGCACCGGCCGA +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWRSHRK*HQSTGR
Trigger: TCGGCCGGTGCTTTGATGGCACTTCCGATGGCTCCT...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAACTCTGGCGGCCTACCTaGCTTTCTGCACAGTTAAAG +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKLWRPT*LSAQLK
Trigger: CTTTAACTGTGCAGAAAGGCAGGTAGGCCGCCAGAG...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAACTGCTTGCCCGTTGTTaGCTCATGGCTGGTACTCTT +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKLLARC*LMAGTL
Trigger: AAGAGTACCAGCCATGAGGCAACAACGGGCAAGCAG...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAGCTTGGCAAGGGTCTTaGGGGTCCTCTTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLAWQGS*GSSSQA
Trigger: AGCCTGTGAAGAGGACCCCCAAGACCCTTGCCAAGC...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAACTCCACAGCCACCTTaGTGGGCAGTGTGTACCCAC +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLTPQPP*WAVCTH
Trigger: GTGGGTACACACTGCCCACCAAGGTGGCTGTGGAGT...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAATCTGGCATTTTGACCTaGGTCGAGTCAAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKSGILT*VESRWT
Trigger: GGTCCACCTTGACTCGACCCAGGTCAAAATGCCAGA...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAACCTGAATTTGCTCACTaGGCAGGAACCTCTCACTCC +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKPEFAH*AGTSHS
Trigger: GGAGTGAGAGGTTCCTGCCCAGTGAGCAAATTCAGG...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAATCTCCTCAGCTGAGTTaGGCCTTGGTTTGGCCATAC +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKSPQLS*ALVWPY
Trigger: GTATGGCCAAACCAAGGCCCAACTCAGCTGAGGAGA...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAACTGCCAGGGGAAGGTaGTTGACCAGGTACTCGTGC +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLTARGR*LTRYSC
Trigger: GCACGAGTACCTGGTCAACCACCTTCCCCTGGCAGT...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAGTGCTTTGGAGGTACTaGAAGGCACTCTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLVLWRY*KALWRP
Trigger: AGGCCGCCAGAGTGCCTTCCAGTACCTCCAAAGCAC...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAGAGACCACAACTCCCTaGATTTGCTCACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLETTTP*ICSLGR
Trigger: CCTGCCCAGTGAGCAAATTCAGGGAGTTGTGGTCTC...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAACTCCAGATGTGCTCTaGATCTCCTCGCAAGGACCC +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLTPDVL*ISSQGP
Trigger: GGGTCCTTGCGAGGAGATGCAGAGCACATCTGGAGT...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAGCGCACGGTATAATTaGAACAGTTCTGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKSARYN*NSSGLV
Trigger: GACCAGGCCAGAACTGTTCCAATTATACCGTGCGCT...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAAGTACTCCCCTGCTTaGTCCTGCTGCAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWKYSPA*SCCRFL
Trigger: GAGGAACCTGCAGCAGGACCAAGCAGGGGAGTACTT...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAGATAAGGTAGCTCTCTaGGGTTGGGTTGCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKDKVAL*GWVARS
Trigger: ACTCCTTGCAACCCAACCCCAGAGAGCTACCTTATC...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAACCCTCTCTTCTGTTCTaGAAATGCCGCAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKPSLLF*KCRSSS
Trigger: AGAACTGCTGCGGCATTTCCAGAACAGAAGAGAGGG...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTGCCCCAGCATCACTCTaGGCCTTACAGAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVAPASL*ALQKYS
Trigger: GGAGTACTTCTGTAAGGCTCAGAGTGATGCTGGGGC...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTACGCTTCCCTTCTTGTTaGAGGGCAGCACTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLRFPSC*RAALWL
Trigger: CAACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCG...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGCCACATTGCTCTTCATaGTTCTGGAGGAGCCATCGG +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWPHCSS*FWRSHR
Trigger: CCGATGGCTCCTCCAGAATCATGAAGAGCAATGTGG...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTACAGGAACTCCAGATGTaGTCTGCATCTCCTCGCAAG +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLQELQM*SASPRK
Trigger: CTTGCGAGGAGATGCAGAGCACATCTGGAGTTCCTG...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGGTTTCCCCGTGGCTTTaGAGCACAGAGACACACTCT +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWVSPWL*STETHS
Trigger: AGAGTGTGTCTCTGTGCTGCAAAGCCACGGGGAAAC...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATCCTCAGCACCAGCTTaGTCTCGTGCTTATAGAGGG +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLSSAPA*SRAYRG
Trigger: CCCTCTATAAGCACGAGAGCAAGCTGGTGCTGAGGA...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAGCAGTGTGTACCCACTaGACTGGATCTCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLAVCTH*TGSPSL
Trigger: AAGAGAGGGAGATCCAGTGCAGTGGGTACACACTGC...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGGTCCTCTTCACAGGCTaGACTCTTCTCACTGACTGG +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWVLFTG*TLLTDW
Trigger: CCAGTCAGTGAGAAGAGTCCAGCCTGTGAAGAGGAC...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGCCCTGCCCACCTGGGTaGTCGATGTTAAACCATGTT +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWPCPPG*SMLNHV
Trigger: AACATGGTTTAACATCGACCACCCAGGTGGGCAGGG...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAACATAGTAGAAGCGAATaGCATCCAGCCGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKHSRSE*HPAAHS
Trigger: ACTATGAGCGGCTGGATGCCATTCGCTTCTACTATG...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTCATTTACCTGGCCCATaGGGCAGGTCAGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVHLPGP*GRSGHK
Trigger: CTTGTGACCTGACCTGCCCCATGGGCCAGGTAAATG...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAGTAGCTCTCTGGGGTTaGGTTGCAAGGAGTCTCATC +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLVALWG*VARSLI
Trigger: GATGAGACTCCTTGCAACCCAACCCCAGAGAGCTAC...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTAAGTTGAGGTCACTTTaGGCAGCTGTGGCCGTCGAG +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVKLRSL*AAVAVE
Trigger: CTCGACGGCCACAGCTGCCCAAAGTGACCTCAACTT...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTGGCTGGCACATGCTCTaGCATTTTGACCTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVGWHML*HFDLGR
Trigger: TCGACCCAGGTCAAAATGCCAGAGCATGTGCCAGCC...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGTTAACACTAGCTCGATaGCAGCTGCCCTGGGGGATA +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWLTLAR*QLPWGI
Trigger: TATCCCCCAGGGCAGCTGCCATCGAGCTAGTGTTAA...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTGCTGGTACTCTTCCTTaGACAGTGCCTGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVAGTLP*TVPVAG
Trigger: CCCAGCTACAGGCACTGTCCAAGGAAGAGTACCAGC...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAATTTGGCTTTCAAACTTaGAATCCCCTTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKFGFQT*NPLPLP
Trigger: GGGAAGAGGAAGGGGATTTCAAGTTTGAAAGCCAAA...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTCTGGGCTCCAGATTaGTCACTGAGACCACAACTC +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLFWAPD*SLRPQL
Trigger: GAGTTGTGGTCTCAGTGATCAATCTGGAGCCCAGAA...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGTTGCTCAGAGGTTGTTaGGCAACACCAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKLLRGC*ATPENL
Trigger: GAGATTTTCTGGTGTTGCTCAACAACCTCTGAGCAA...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAACGTAGTAGAAGGAATTaGTGGCGTTCTGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKRSRRN*WRSESS
Trigger: ACTGCTTTCAGAACGCCAGCAATTCCTTCTACTACG...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTACTTTGTAGCCAGTCATaGTCACGCGGTTATTCCCCA +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLLCSQS*SRGYSP
Trigger: TGGGGAATAACCGCGTGAGCATGACTGGCTACAAAG...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAGTGTTGACAAACTTCTaGAGCCTGTCCACAAATGTG +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKVLTNF*SLSTNV
Trigger: CACATTTGTGGACAGGCTGCAGAAGTTTGTCAACAC...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAGTGATGGGCTCTTTCTaGCGAAGCATCTTGATCTCG +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLVMGSF*RSILIS
Trigger: CGAGATCAAGATGCTTCGGCAGAAAGAGCCCATCAC...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAACTGAGGGACACCGATTaGATTTGGGTTGAATTTAGG +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKLRDTD*IWVEFR
Trigger: CCTAAATTCAACCCAAATGCAATCGGTGTCCCTCAG...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAACTCTTCTCACTGACTaGGCAAGCATCGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLTLLTD*ASIVCL
Trigger: GAGACAGACGATGCTTGCCCAGTCAGTGAGAAGAGT...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAGCAGTGTGTTGTTGTaGTACCAGAAGTACTTGTCC +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKSSVLL*YQKYLS
Trigger: GGACAAGTACTTCTGGTACCACAACAACACACTGCT...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAGCATCTTGATCTCGTaGAACACTGCGCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWSILIS*NTALPF
Trigger: GAAGGGAAGCGCAGTGTTCCACGAGATCAAGATGCT...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATAGAAACTTTTGGATaGGATCTCCAGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKIETFG*DLQLSH
Trigger: GTGGCTGAGCTGGAGATCCCATCCAAAAGTTTCTAT...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTCCACAGTCCTGTGTCTaGGTTGAGCGACCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVPQSCV*VERPEF
Trigger: AAACTCTGGTCGCTCAACCCAGACACAGGACTGTGG...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTACGTCTTTTTAACCCGTaGATCCTCATGGTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLRLFNP*ILMVCP
Trigger: CGGACAGACCATGAGGATCCACGGGTTAAAAAGACG...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAATACATTCACCTCCAGTaGCCCCACAATCTTAACCTT +
Preference number: 4 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKYIHLQ*PHNLNL
Trigger: AAGGTTAAGATTGTGGGGCCACTGGAGGTGAATGTA...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTACGATGGCAGCTGCCCTaGGGGATAACCTTTACTAAT +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLRWQLP*GITFTN
Trigger: ATTAGTAAAGGTTATCCCCCAGGGCAGCTGCCATCG...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAACGACAGCTGTCACATaGGATGGACAGAAAGGACTA +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLTTAVT*DGQKGL
Trigger: TAGTCCTTTCTGTCCATCTCATGTGACAGCTGTCGT...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAAGGAGTCTCATCATGTaGAATGACAGTGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLRSLIM*NDSELG
Trigger: ACCCAGCTCACTGTCATTGCACATGATGAGACTCCT...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAATTCTCCAGAAAGGCTTaGCAAGACATAGACAGAGTA +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKFSRKA*QDIDRV
Trigger: TACTCTGTCTATGTCTTGGCAAGCCTTTCTGGAGAA...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTGCAATGACAGTGAGCTaGGTGACCTTGGACTTCACA +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVAMTVS*VTLDFT
Trigger: TGTGAAGTCCAAGGTCACCCAGCTCACTGTCATTGC...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAGTAGAAGGAATTGCTaGCGTTCTGAAAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKSRRNC*RSESSH
Trigger: ATGACTGCTTTCAGAACGCCAGCAATTCCTTCTACT...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTACCCGTGGATCCTCATaGTCTGTCCGACGGTATTTA +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVTRGSS*SVRRYL
Trigger: TAAATACCGTCGGACAGACCATGAGGATCCACGGGT...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTGCACTTTGGTTGTGTTaGCAAACTTCTGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVALWLC*QTSAAC
Trigger: ACAGGCTGCAGAAGTTTGTCAACACAACCAAAGTGC...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAATTGACCAGGTACTCGTaGAACATAGAGTTAACACTA +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKLTRYS*NIELTL
Trigger: TAGTGTTAACTCTATGTTGCACGAGTACCTGGTCAA...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTACAAGTGACAGTCTGTaGATCAGTCTCACGACAGCT +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVTSDSL*ISLTTA
Trigger: AGCTGTCGTGAGACTGATGCACAGACTGTCACTTGT...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAATTGGCCATACTGATTTaGAAAGCCGTCTTTTTAACC +
Preference number: 4 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKLAILI*KAVFLT
Trigger: GGTTAAAAAGACGGCTTTCCAAATCAGTATGGCCAA...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR TCA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTTTGGTTTGGCCATACTaGTTTGGAAAGCCGTCTTTT +
Preference number: 4 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVLVWPY*FGKPSF
Trigger: AAAAGACGGCTTTCCAAATCAGTATGGCCAAACCAA...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGCTCTTGTTCCTCCTTTaGCTTTCAAACTTGAAATCC +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWLLFLL*LSNLKS
Trigger: GGATTTCAAGTTTGAAAGCCAAAGGAGGAACAAGAG...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR GCA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGCACAAAGAAACAAACTaGACCAAACCAGATATGTTT +
Preference number: 4 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWHKETN*TKPDMF
Trigger: AAACATATCTGGTTTGGTGCAGTTTGTTTCTTTGTG...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
3UTR CAA 72 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTaGTGGAACATGGCCAAGAAAAATGTTTTATTGTTG +
Preference number: 4 (lower is better)
Translates to: IYMDCDRDFAYI*WNMAKKNVLLL
Trigger: CAACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS TCA 90 bp GGCAAGGGTCTTGGGGGTCCTCTTCACAGGCTGGACTCTTCTCACTaGCTGGGCAAGCATCGTCTGTCTCCCCAGCACGGTGGTGACCTC +
Preference number: 5 (lower is better)
Translates to: GKGLGGPLHRLDSSH*LGKHRLSPQHGGDL
Trigger: GAGGTCACCACCGTGCTGGGGAGACAGACGATGCTTGCCCAGTCAGTGAGAAGAGTCCAGCCTGTGAAGAGGACCCCCAAGACCCTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048762.8
ENSMUST00000141382.2
CDS CCA 90 bp GAGTCGGCAGGCTTGGCAAGGGTCTTGGGGGTCCTCTTCACAGGCTaGACTCTTCTCACTGACTGGGCAAGCATCGTCTGTCTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: ESAGLARVLGVLFTG*TLLTDWASIVCLPS
Trigger: GCTGGGGAGACAGACGATGCTTGCCCAGTCAGTGAGAAGAGTCCAGCCTGTGAAGAGGACCCCCAAGACCCTTGCCAAGCCTGCCGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048762.8
ENSMUST00000141382.2
CDS CCA 90 bp AGGGTCTTGGGGGTCCTCTTCACAGGCTGGACTCTTCTCACTGACTaGGCAAGCATCGTCTGTCTCCCCAGCACGGTGGTGACCTCAAGG +
Preference number: 5 (lower is better)
Translates to: RVLGVLFTGWTLLTD*ASIVCLPSTVVTSR
Trigger: CCTTGAGGTCACCACCGTGCTGGGGAGACAGACGATGCTTGCCCAGTCAGTGAGAAGAGTCCAGCCTGTGAAGAGGACCCCCAAGACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048762.8
ENSMUST00000141382.2
CDS-3UTR CAA 90 bp GAAGGAATTGCTGGCGTTCTGAAAGCAGTCATGGGGCAGCCGGATAAGGTAGCTTGGGAGTCGGCAGGCTaGGCAAGGGTCTTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: EGIAGVLKAVMGQPDKVAWESAG*ARVLGV
Trigger: GACCCCCAAGACCCTTGCCAAGCCTGCCGACTCCCA...AGCTACCTTATCCGGCTGCCCCATGACTGCTTTCAGAACGCCAGCAATTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141382.2
CDS CCA 90 bp GTAGAAGCGAATGGCATCCAGCCGCTCATAGTCACCCTGCCCACCTaGGTGGTCGATGTTAAACCATGTTGTCCACTCTCCGGGACTCTC +
Preference number: 5 (lower is better)
Translates to: VEANGIQPLIVTLPT*VVDVKPCCPLSGTL
Trigger: GAGAGTCCCGGAGAGTGGACAACATGGTTTAACATCGACCACCCAGGTGGGCAGGGTGACTATGAGCGGCTGGATGCCATTCGCTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGTGGGAGTCGGCAGGCTaGGCAAGGGTCTTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKWESAG*ARVLGV
Trigger: GACCCCCAAGACCCTTGCCAAGCCTGCCGACTCCCA...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAACGCATGGGCTCCCCGTaGTCAGCAGCAGTGACTCGG +
Preference number: 5 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKRMGSP*SAAVTR
Trigger: CCGAGTCACTGCTGCTGACAACGGGGAGCCCATGCG...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAGTAGGCCACCCCTGCTaGCCCGTTGTTGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKVGHPC*PVVASW
Trigger: CCATGAGGCAACAACGGGCAAGCAGGGGTGGCCTAC...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAACAGGCAGCTGAGCACTaGCTCCAGGGAGACCAGGAA +
Preference number: 5 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKQAAEH*LQGDQE
Trigger: TTCCTGGTCTCCCTGGAGCAAGTGCTCAGCTGCCTG...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTACGGCACCGGATCCCATaGTCCTGCTGCCCTGCACAG +
Preference number: 5 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLRHRIP*SCCPAQ
Trigger: CTGTGCAGGGCAGCAGGACAATGGGATCCGGTGCCG...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGCCTGGCCGGTGTGCTTaGGAGGTACTGGAAGGCACT +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKPGRCA*EVLEGT
Trigger: AGTGCCTTCCAGTACCTCCAAAGCACACCGGCCAGG...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAGGTTTCCCCGTGGCTTaGCAGCACAGAGACACACTC +
Preference number: 5 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKGFPVA*QHRDTL
Trigger: GAGTGTGTCTCTGTGCTGCAAAGCCACGGGGAAACC...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGGAAGTTGAGGTCACTTaGGGCAGCTGTGGCCGTCGA +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKEVEVT*GSCGRR
Trigger: TCGACGGCCACAGCTGCCCAAAGTGACCTCAACTTC...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGTCGCTGGTGTCATTGTaGACTGCCAGGGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKSLVSL*TARGRW
Trigger: CCACCTTCCCCTGGCAGTCAACAATGACACCAGCGA...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGCCTGCTTGCCCGTTGTaGCCTCATGGCTGGTACTCT +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKPACPL*PHGWYS
Trigger: AGAGTACCAGCCATGAGGCAACAACGGGCAAGCAGG...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGCTCTCCTCAGCTGAGTaGGGCCTTGGTTTGGCCATA +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKLSSAE*GLGLAI
Trigger: TATGGCCAAACCAAGGCCCAACTCAGCTGAGGAGAG...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAGCCAGGGGAAGGTGGTaGACCAGGTACTCGTGCAAC +
Preference number: 5 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLARGRW*TRYSCN
Trigger: GTTGCACGAGTACCTGGTCAACCACCTTCCCCTGGC...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAATACTCGCTGGTGTCATaGTTGACTGCCAGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKYSLVS*LTARGR
Trigger: CCTTCCCCTGGCAGTCAACAATGACACCAGCGAGTA...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGGAAGTACTCCCCTGCTaGGTCCTGCTGCAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWEVLPC*VLLQVP
Trigger: AGGAACCTGCAGCAGGACCAAGCAGGGGAGTACTTC...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGCTCTCTGGGGTTGGGTaGCAAGGAGTCTCATCATGT +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKLSGVG*QGVSSC
Trigger: ACATGATGAGACTCCTTGCAACCCAACCCCAGAGAG...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAGCGCTTCCCTTCTTGTaGAAGGGCAGCACTTTGGTT +
Preference number: 5 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKALPFL*KGSTLV
Trigger: AACCAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGC...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGACTGCGCTTCCCTTCTaGTTGAAGGGCAGCACTTTG +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKTALPF*LKGSTL
Trigger: CAAAGTGCTGCCCTTCAACAAGAAGGGAAGCGCAGT...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAGGTGGACCTTCACCTaGCCAGCATTAAGTGACTCG +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKRWTFT*PALSDS
Trigger: CGAGTCACTTAATGCTGGCAAGGTGAAGGTCCACCT...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp TATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAACATGCTCTGGCATTTaGACCTGGGTCGAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: YMDCDRDFAYILWNMAKKTCSGI*TWVESR
Trigger: CCTTGACTCGACCCAGGTCAAAATGCCAGAGCATGT...TTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGCACAACTCCCTGAATTaGCTCACTGGGCAGGAACCT +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKHNSLN*LTGQEP
Trigger: AGGTTCCTGCCCAGTGAGCAAATTCAGGGAGTTGTG...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAAGCATTCCACTGCACTaGAACTCCAGGCAGGCAGAT +
Preference number: 5 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKSIPLH*NSRQAD
Trigger: ATCTGCCTGCCTGGAGTTCAAGTGCAGTGGAATGCT...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGGGCTGGTACTCTTCCTaGGACAGTGCCTGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWGWYSS*DSACSW
Trigger: CCAGCTACAGGCACTGTCCAAGGAAGAGTACCAGCC...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGCCCAGGGGGATAATGTaGGTCTCCATGGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWPRGIM*VSMASN
Trigger: GTTGGAAGCCATGGAGACCAACATTATCCCCCTGGG...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTGGTAGCTCTCTGGGGTaGGGTTGCAAGGAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVGSSLG*GCKESH
Trigger: ATGAGACTCCTTGCAACCCAACCCCAGAGAGCTACC...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAAGCACTTTGGTTGTGTaGACAAACTTCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKSTLVV*TNFCSL
Trigger: CAGGCTGCAGAAGTTTGTCAACACAACCAAAGTGCT...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAGTCCTGTGTCTGGGTaGAGCGACCAGAGTTTCATG +
Preference number: 5 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWSPVSG*SDQSFM
Trigger: CATGAAACTCTGGTCGCTCAACCCAGACACAGGACT...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAACTTCTCCAGAAAGGCTaGCCAAGACATAGACAGAGT +
Preference number: 5 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKLLQKG*PRHRQS
Trigger: ACTCTGTCTATGTCTTGGCAAGCCTTTCTGGAGAAG...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGGAGTTGGGCCTTGGTTaGGCCATACTGATTTGGAAA +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKELGLG*AILIWK
Trigger: TTTCCAAATCAGTATGGCCAAACCAAGGCCCAACTC...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAGACTTCAGGCTAGTCTaGGGCATCGTGATCATAATT +
Preference number: 5 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKDFRLV*GIVIII
Trigger: AATTATGATCACGATGCCCAAGACTAGCCTGAAGTC...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGCTCACAAACTCCGCATaGATGGTAGCTGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWLTNSA*MVADFR
Trigger: CCTGAAGTCAGCTACCATCAATGCGGAGTTTGTGAG...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAATTGAAGGGCAGCACTTaGGTTGTGTTGACAAACTTC +
Preference number: 5 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKLKGST*VVLTNF
Trigger: GAAGTTTGTCAACACAACCAAAGTGCTGCCCTTCAA...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGCTTTGGCTTTCAAACTaGAAATCCCCTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKLWLSN*KSPSSS
Trigger: GGAAGAGGAAGGGGATTTCAAGTTTGAAAGCCAAAG...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTAGGGCAACTCCCACATaGCTCTTCATGATTCTGGAG +
Preference number: 5 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVRATPT*LFMILE
Trigger: CTCCAGAATCATGAAGAGCAATGTGGGAGTTGCCCT...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAATTAGTTGCTCAGAGGTaGTTGAGCAACACCAGAAAA +
Preference number: 5 (lower is better)
Translates to: IWTVTETLLTSCGTWPRKLVAQR*LSNTRK
Trigger: TTTTCTGGTGTTGCTCAACAACCTCTGAGCAACTAA...TTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAATTTTCAGGATGGTTTaGCCATCAGGACACAAGCCA +
Preference number: 5 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLIFRMV*PSGHKP
Trigger: TGGCTTGTGTCCTGATGGCAAAACCATCCTGAAAAT...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTGGGGCAAACTTGGTCTaGGTGATTTTCAGGATGGTT +
Preference number: 5 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVGANLV*VIFRMV
Trigger: AACCATCCTGAAAATCACCAAGACCAAGTTTGCCCC...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATCATCATTGATGAAGTaGAGGTCACTTTGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLSSLMK*RSLWAA
Trigger: AGCTGCCCAAAGTGACCTCAACTTCATCAATGATGA...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGTTTGGCCATACTGATTaGGAAAGCCGTCTTTTTAAC +
Preference number: 5 (lower is better)
Translates to: IYMDCDRDFAYILWNMAKFGHTD*ESRLFN
Trigger: GTTAAAAAGACGGCTTTCCAAATCAGTATGGCCAAA...CTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGATAATTGGGGCAAACTaGGTCTTGGTGATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWIIGAN*VLVIFR
Trigger: CCTGAAAATCACCAAGACCAAGTTTGCCCCAATTAT...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp TGTGACAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTAGTGTCTCCTTCATCATaGATGAAGTTGAGGTCACTT +
Preference number: 5 (lower is better)
Translates to: CDRDFAYILWNMAKKNVLVSPSS*MKLRSL
Trigger: AAGTGACCTCAACTTCATCAATGATGAAGGAGACAC...TAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTGTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp ACCACCATTTATATATATATGGACTGTGACAGAGACTTTGCTTACATCTTGTGGCCGATTGCATTTGGGTaGAATTTAGGAGAAGACTCA +
Preference number: 5 (lower is better)
Translates to: TTIYIYMDCDRDFAYILWPIAFG*NLGEDS
Trigger: TGAGTCTTCTCCTAAATTCAACCCAAATGCAATCGG...CCACAAGATGTAAGCAAAGTCTCTGTCACAGTCCATATATATATAAATGGTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS-3UTR CAA 90 bp CAGAGACTTTGCTTACATCTTGTGGAACATGGCCAAGAAAAATGTTTTATTGTTGTTGCTCAGAGGTTGTaGAGCAACACCAGAAAATCT +
Preference number: 5 (lower is better)
Translates to: QRLCLHLVEHGQEKCFIVVAQRL*SNTRKS
Trigger: AGATTTTCTGGTGTTGCTCAACAACCTCTGAGCAAC...AACAATAAAACATTTTTCTTGGCCATGTTCCACAAGATGTAAGCAAAGTCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048762.8
CDS CCA 72 bp GGGGTCCTCTTCACAGGCTGGACTCTTCTCACTGACTaGGCAAGCATCGTCTGTCTCCCCAGCACGGTGGTG +
Preference number: 6 (lower is better)
Translates to: GVLFTGWTLLTD*ASIVCLPSTVV
Trigger: CACCACCGTGCTGGGGAGACAGACGATGCTTGCCCAGTCAGTGAGAAGAGTCCAGCCTGTGAAGAGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000048762.8
ENSMUST00000141382.2
CDS TCA 72 bp CTTGGGGGTCCTCTTCACAGGCTGGACTCTTCTCACTaGCTGGGCAAGCATCGTCTGTCTCCCCAGCACGGT +
Preference number: 6 (lower is better)
Translates to: LGGPLHRLDSSH*LGKHRLSPQHG
Trigger: ACCGTGCTGGGGAGACAGACGATGCTTGCCCAGTCAGTGAGAAGAGTCCAGCCTGTGAAGAGGACCCCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000048762.8
ENSMUST00000141382.2
CDS CCA 72 bp GGCTTGGCAAGGGTCTTGGGGGTCCTCTTCACAGGCTaGACTCTTCTCACTGACTGGGCAAGCATCGTCTGT +
Preference number: 6 (lower is better)
Translates to: GLARVLGVLFTG*TLLTDWASIVC
Trigger: ACAGACGATGCTTGCCCAGTCAGTGAGAAGAGTCCAGCCTGTGAAGAGGACCCCCAAGACCCTTGCCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000048762.8
ENSMUST00000141382.2
CDS TCA 72 bp ACTGGGCAAGCATCGTCTGTCTCCCCAGCACGGTGGTaGCCTCAAGGACCAGGAAAGAGAATACCCAAGTCT +
Preference number: 6 (lower is better)
Translates to: TGQASSVSPARW*PQGPGKRIPKS
Trigger: AGACTTGGGTATTCTCTTTCCTGGTCCTTGAGGTCACCACCGTGCTGGGGAGACAGACGATGCTTGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000048762.8
ENSMUST00000141382.2