Pregenerated sensors for CILK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009828Ensembl transcript IDs: ENSMUST00000009972.6, ENSMUST00000044551.8, ENSMUST00000117330.8, ENSMUST00000118869.8
Found 287 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTCCCCACCCTGCCTCTGTGGCTCGGTGGGGCCTGAGGGAGGCTaGCTGGCAGTTCTGTGGGTAGGTAGGTCCTGGCTGGTAGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: SSPPCLCGSVGPEGG*LAVLWVGRSWLVGP Trigger: GGGGCCTACCAGCCAGGACCTACCTACCCACAGAACTGCCAGCCAGCCTCCCTCAGGCCCCACCGAGCCACAGAGGCAGGGTGGGGAGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR GCA 90 bp | GGGTGCAGGTGGAGACACCTTCGATGGGCTGCAAGCTCCCCACCCTaGCTCTGTGGCTCGGTGGGGCCTGAGGGAGGCTGGCTGGCAGTT | + |
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Preference number: 1 (lower is better) Translates to: GCRWRHLRWAASSPP*LCGSVGPEGGWLAV Trigger: AACTGCCAGCCAGCCTCCCTCAGGCCCCACCGAGCCACAGAGGCAGGGTGGGGAGCTTGCAGCCCATCGAAGGTGTCTCCACCTGCACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR GCA 90 bp | GCATTTGGAAACAGTAACAAAAACGTCCTTTGGGCCCTGGGAGCATaGGAGTGGCTCTGCCATCGGTTGAGGTTGGCTACTGGCCTCGTG | + |
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Preference number: 1 (lower is better) Translates to: AFGNSNKNVLWALGA*EWLCHRLRLATGLV Trigger: CACGAGGCCAGTAGCCAACCTCAACCGATGGCAGAGCCACTCGCATGCTCCCAGGGCCCAAAGGACGTTTTTGTTACTGTTTCCAAATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR GCA 90 bp | AGTAACAAAAACGTCCTTTGGGCCCTGGGAGCATGCGAGTGGCTCTaGCATCGGTTGAGGTTGGCTACTGGCCTCGTGACTCTTCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: SNKNVLWALGACEWL*HRLRLATGLVTLPF Trigger: AAAAGGAAGAGTCACGAGGCCAGTAGCCAACCTCAACCGATGGCAGAGCCACTCGCATGCTCCCAGGGCCCAAAGGACGTTTTTGTTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR GCA 90 bp | CTTGTTAACAGGGAAACATTCCCTCTCAAGCCCTTGCCCGTGATGTaGGTTCTGCACGCCCCTCAGCATCAAAAGGGCTCCATCGAGTGT | + |
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Preference number: 1 (lower is better) Translates to: LVNRETFPLKPLPVM*VLHAPQHQKGSIEC Trigger: ACACTCGATGGAGCCCTTTTGATGCTGAGGGGCGTGCAGAACGCACATCACGGGCAAGGGCTTGAGAGGGAATGTTTCCCTGTTAACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR CCA 90 bp | GCCTGTAAGGTAACCAGGAGAGGAGGTGGCTGCGTCACACAGAGATaGAAGCAAGTGGATCCTCTGTATGCTTCTGTCTCCAGACGAGCT | + |
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Preference number: 1 (lower is better) Translates to: ACKVTRRGGGCVTQR*KQVDPLYASVSRRA Trigger: AGCTCGTCTGGAGACAGAAGCATACAGAGGATCCACTTGCTTCCATCTCTGTGTGACGCAGCCACCTCCTCTCCTGGTTACCTTACAGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR GCA 90 bp | GTCCTTGGAACTGGAACTATAAATGGTTGTGAGCTGTCTCTTTGGTaGTGGGAATCGAACCTGGGCCTTCTGGAGGAGCAGCTGGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: VLGTGTINGCELSLW*WESNLGLLEEQLVL Trigger: GAGCACCAGCTGCTCCTCCAGAAGGCCCAGGTTCGATTCCCAGCACCAAAGAGACAGCTCACAACCATTTATAGTTCCAGTTCCAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR GCA 90 bp | CATGTATGTGTCCCTGTCAGTGGCAATTATATACACGAGTGCATGTaGCCACAGAAGCCAGAAGAGGGCGTCGGATCCCTTGGAACTGGA | + |
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Preference number: 1 (lower is better) Translates to: HVCVPVSGNYIHECM*PQKPEEGVGSLGTG Trigger: TCCAGTTCCAAGGGATCCGACGCCCTCTTCTGGCTTCTGTGGGCACATGCACTCGTGTATATAATTGCCACTGACAGGGACACATACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR TCA 90 bp | CTCAGAAGAGGGCAGAGTCCTTGGAACTGGAACTATAAATGGTTGTaGGCTGTCTCTTTGGTGCTGGGAATCGAACCTGGGCCTTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LRRGQSPWNWNYKWL*AVSLVLGIEPGPSG Trigger: TCCAGAAGGCCCAGGTTCGATTCCCAGCACCAAAGAGACAGCTCACAACCATTTATAGTTCCAGTTCCAAGGACTCTGCCCTCTTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR GCA 90 bp | GTGACTCTTCCTTTTGCCTGTAAGGTAACCAGGAGAGGAGGTGGCTaGGTCACACAGAGATGGAAGCAAGTGGATCCTCTGTATGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: VTLPFACKVTRRGGG*VTQRWKQVDPLYAS Trigger: AGAAGCATACAGAGGATCCACTTGCTTCCATCTCTGTGTGACGCAGCCACCTCCTCTCCTGGTTACCTTACAGGCAAAAGGAAGAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR CCA 90 bp | CTTGGAACTGGAACTATAAATGGTTGTGAGCTGTCTCTTTGGTGCTaGGAATCGAACCTGGGCCTTCTGGAGGAGCAGCTGGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: LGTGTINGCELSLWC*ESNLGLLEEQLVLL Trigger: TAAGAGCACCAGCTGCTCCTCCAGAAGGCCCAGGTTCGATTCCCAGCACCAAAGAGACAGCTCACAACCATTTATAGTTCCAGTTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR CCA 90 bp | ACAGGAAGATCCCAAGTTCAAAGCTATCCTCAGCGACATAGTGAGTaGGAGGCCAGTCTGGGCTACATAGGACCCTGTCTCAAAACAACA | + |
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Preference number: 1 (lower is better) Translates to: TGRSQVQSYPQRHSE*EASLGYIGPCLKTT Trigger: TGTTGTTTTGAGACAGGGTCCTATGTAGCCCAGACTGGCCTCCCACTCACTATGTCGCTGAGGATAGCTTTGAACTTGGGATCTTCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR CCA 90 bp | GCCCACAGAAGCCAGAAGAGGGCGTCGGATCCCTTGGAACTGGAATaGCTGAGTCATCTCTCCAGCCTGGGTATTTTTAAAAATGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: AHRSQKRASDPLELE*LSHLSSLGIFKNGK Trigger: TTTTCCATTTTTAAAAATACCCAGGCTGGAGAGATGACTCAGCCATTCCAGTTCCAAGGGATCCGACGCCCTCTTCTGGCTTCTGTGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR GCA 90 bp | ATTTTACATGTATGTGTCCCTGTCAGTGGCAATTATATACACGAGTaGATGTGCCCACAGAAGCCAGAAGAGGGCGTCGGATCCCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: ILHVCVPVSGNYIHE*MCPQKPEEGVGSLG Trigger: TCCAAGGGATCCGACGCCCTCTTCTGGCTTCTGTGGGCACATGCACTCGTGTATATAATTGCCACTGACAGGGACACATACATGTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR GCA 90 bp | AGGTGGCTGCGTCACACAGAGATGGAAGCAAGTGGATCCTCTGTATaGTTCTGTCTCCAGACGAGCTTTGCTATTTGTAGAACTGCTGTA | + |
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Preference number: 1 (lower is better) Translates to: RWLRHTEMEASGSSV*FCLQTSFAICRTAV Trigger: TACAGCAGTTCTACAAATAGCAAAGCTCGTCTGGAGACAGAAGCATACAGAGGATCCACTTGCTTCCATCTCTGTGTGACGCAGCCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR CCA 90 bp | CTGGTTTGCTCAGCTGCACAGCTGCCGCTCTCATGTAAACTTTCATaGCTAACTTCAGAAGGGAAGCTGTTTGCTAGTCAAGGAAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: LVCSAAQLPLSCKLS*LTSEGKLFASQGRE Trigger: TTCCCTTCCTTGACTAGCAAACAGCTTCCCTTCTGAAGTTAGCCATGAAAGTTTACATGAGAGCGGCAGCTGTGCAGCTGAGCAAACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR TCA 90 bp | ACTTCCACCCCCAGAACAATCAATACAAGCTGTTCAGAAAAGCAGTaGGCAGACCACCTTCCGAAGACCAGTCTAAGAGAGCCTAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: TSTPRTINTSCSEKQ*ADHLPKTSLREPRV Trigger: TACTCTAGGCTCTCTTAGACTGGTCTTCGGAAGGTGGTCTGCTCACTGCTTTTCTGAACAGCTTGTATTGATTGTTCTGGGGGTGGAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR CCA 90 bp | TTGGAATCGAGTCAGTGGAACAGAACTGCATTCTGTACTGAGATGTaGGAGCTGGGAAGGCTTTGTCCAGCTGGTGTTCAAGTCACATAT | + |
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Preference number: 1 (lower is better) Translates to: LESSQWNRTAFCTEM*ELGRLCPAGVQVTY Trigger: ATATGTGACTTGAACACCAGCTGGACAAAGCCTTCCCAGCTCCCACATCTCAGTACAGAATGCAGTTCTGTTCCACTGACTCGATTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR TCA 90 bp | CTCTGGGCATCTCAGCATATCCATGCCAACAAACCAGGCCCAGAATaGGCCACTCTGACTTGCCAGAAAGCTGTTTTGATATTGCTTTTA | + |
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Preference number: 1 (lower is better) Translates to: LWASQHIHANKPGPE*ATLTCQKAVLILLL Trigger: TAAAAGCAATATCAAAACAGCTTTCTGGCAAGTCAGAGTGGCTCATTCTGGGCCTGGTTTGTTGGCATGGATATGCTGAGATGCCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR GCA 90 bp | ATTTCATTCACAGAAAACACAACAGGAATGGAGTCTGCTGGACTGTaGAACATGGCAATACTAGGCGCAAACCAAGCTGAGCTGTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: ISFTENTTGMESAGL*NMAILGANQAELSV Trigger: GACAGACAGCTCAGCTTGGTTTGCGCCTAGTATTGCCATGTTGCACAGTCCAGCAGACTCCATTCCTGTTGTGTTTTCTGTGAATGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
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| 3UTR CCA 90 bp | TCTTTACCCCCTGTGCTTTGCCTTCTAATGGTGCGAAGGTTGCTTTaGAATCGAGTCAGTGGAACAGAACTGCATTCTGTACTGAGATGT | + |
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Preference number: 1 (lower is better) Translates to: SLPPVLCLLMVRRLL*NRVSGTELHSVLRC Trigger: ACATCTCAGTACAGAATGCAGTTCTGTTCCACTGACTCGATTCCAAAGCAACCTTCGCACCATTAGAAGGCAAAGCACAGGGGGTAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR CCA 90 bp | AAAGCAATAAGTATGTCAAATATTTCCTTAGAAACTTATCGCTTCTaGTCATACAGTGACCTGTGTCACCTGCCCCACCATTCCCACCCC | + |
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Preference number: 1 (lower is better) Translates to: KAISMSNISLETYRF*SYSDLCHLPHHSHP Trigger: GGGGTGGGAATGGTGGGGCAGGTGACACAGGTCACTGTATGACCAGAAGCGATAAGTTTCTAAGGAAATATTTGACATACTTATTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR TCA 90 bp | CAACGGTATTTATCCTTGGAACTGAAAGGGAAAGGAGCCTTCACTTaGCACATTTTGCCTTCCTGTACTCAGGTCTTAAGAATTCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: QRYLSLELKGKGAFT*HILPSCTQVLRIQE Trigger: TTCCTGAATTCTTAAGACCTGAGTACAGGAAGGCAAAATGTGTCAAGTGAAGGCTCCTTTCCCTTTCAGTTCCAAGGATAAATACCGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR TCA 90 bp | GGACTGCTCCACTCCCAACCTCCCCTGAGGACAGAACCTTTGGGGAGCTGGCTGGCAGGGCAGGGAAACTaGAGAGATGCCTGCGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: GLLHSQPPLRTEPLGSWLAGQGN*RDACVS Trigger: TGAGACGCAGGCATCTCTTCAGTTTCCCTGCCCTGC...CAGCCAGCTCCCCAAAGGTTCTGTCCTCAGGGGAGGTTGGGAGTGGAGCAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCTGGCTGGCAGTTCTGTGGGTAGGTAGGTCCTGGCTGGTAGGCCCCAGGTGTTCAGAAAAGCAGTaGGCAGACCACCTTCCGAAG | + |
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Preference number: 2 (lower is better) Translates to: GGWLAVLWVGRSWLVGPRCSEKQ*ADHLPK Trigger: CTTCGGAAGGTGGTCTGCTCACTGCTTTTCTGAACA...CCTGGGGCCTACCAGCCAGGACCTACCTACCCACAGAACTGCCAGCCAGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGGCAGTTCTGTGGGTAGGTAGGTCCTGGCTGGTAGGCCCCAGGGAACCACACCAGAGCAACAGGTaGCTACAACTCTGCCATCTC | + |
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Preference number: 2 (lower is better) Translates to: WLAVLWVGRSWLVGPREPHQSNR*LQLCHL Trigger: GAGATGGCAGAGTTGTAGTCACCTGTTGCTCTGGTG...TGGTTCCCTGGGGCCTACCAGCCAGGACCTACCTACCCACAGAACTGCCAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR CAA 90 bp | AACGTCCTTTGGGCCCTGGGAGCATGCGAGTGGCTCTGCCATCGGTaGAGGTTGGCTACTGGCCTCGTGACTCTTCCTTTTGCCTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: NVLWALGACEWLCHR*RLATGLVTLPFACK Trigger: CTTACAGGCAAAAGGAAGAGTCACGAGGCCAGTAGCCAACCTCAACCGATGGCAGAGCCACTCGCATGCTCCCAGGGCCCAAAGGACGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGCCTCGTGACTCTTCCTTTTGCCTGTAAGGTAACCAGGAGAGGAGGTGGCACCGCCTCGTGGTTGTaGGGGTACAATGGAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: TGLVTLPFACKVTRRGGGTASWL*GYNGAS Trigger: GCTGGCTCCATTGTACCCGCACAACCACGAGGCGGT...GCCACCTCCTCTCCTGGTTACCTTACAGGCAAAAGGAAGAGTCACGAGGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR CCA 90 bp | AACCAGGAGAGGAGGTGGCTGCGTCACACAGAGATGGAAGCAAGTGGATCCTCTACACGCCACACAAGATaGGGGCTGAGCCGTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: NQERRWLRHTEMEASGSSTRHTR*GLSRGT Trigger: TGTGCCACGGCTCAGCCCCCATCTTGTGTGGCGTGT...AGAGGATCCACTTGCTTCCATCTCTGTGTGACGCAGCCACCTCCTCTCCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR CCA 90 bp | TATCTACAGCTTGCAGGCAGCTTGGCAGCTAGCCGAGCAGGATTTGAGATTTACCCCCACCCACAGGTGTaGGCTGGTGAAGGCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: YLQLAGSLAASRAGFEIYPHPQV*AGEGRG Trigger: GCCTCTGCCTTCACCAGCCCACACCTGTGGGTGGGG...GTAAATCTCAAATCCTGCTCGGCTAGCTGCCAAGCTGCCTGCAAGCTGTAGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR TCA 90 bp | CGTACGTCTGCGGTTCTTGCTAGTTCTTTAGAATTTGGTTTTCCAGTAAGCTGGTGGCTCGGTGGGGCCTaGGGGAGGCTGGCTGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: RTSAVLASSLEFGFPVSWWLGGA*GRLAGS Trigger: ACTGCCAGCCAGCCTCCCTCAGGCCCCACCGAGCCA...CCAGCTTACTGGAAAACCAAATTCTAAAGAACTAGCAAGAACCGCAGACGTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR GCA 90 bp | TCGGATCCCTTGGAACTGGAATGGCTGAGTCATCTCTCCAGCCTGGGTATTTTTCTCTGGCTAGAGGGGTaGAGGTGGAGACACCTTCGA | + |
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Preference number: 2 (lower is better) Translates to: SDPLELEWLSHLSSLGIFLWLEG*RWRHLR Trigger: TCGAAGGTGTCTCCACCTGCACCCCTCTAGCCAGAG...AAAAATACCCAGGCTGGAGAGATGACTCAGCCATTCCAGTTCCAAGGGATCCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR GCA 90 bp | GAAACTTATCGCTTCTGGTCATACAGTGACCTGTGTCACCTGCCCCACCATTCCTCCAGTAAGCTGGTTTaGTCAGCTGCACAGCTGCCG | + |
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Preference number: 2 (lower is better) Translates to: ETYRFWSYSDLCHLPHHSSSKLV*SAAQLP Trigger: CGGCAGCTGTGCAGCTGAGCAAACCAGCTTACTGGA...GGAATGGTGGGGCAGGTGACACAGGTCACTGTATGACCAGAAGCGATAAGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGATTTGAGGGCAGACAGAGCCCTTTGGAAGTCGCTGTTAATACATCAAAGCAGGGAGCCTCCTCTCTaGCTAGAGGGGTGCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SDLRADRALWKSLLIHQSREPPL*LEGCRW Trigger: CCACCTGCACCCCTCTAGCCAGAGAGGAGGCTCCCT...GCTTTGATGTATTAACAGCGACTTCCAAAGGGCTCTGTCTGCCCTCAAATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR CAA 90 bp | AAGCACAGCAGGGCATCCGAGGTTAGATTTGGTAAGTCTGTAAACTaGGTTTTTGGCTTCCTCCTGGGTCAGGGAGGACTGCTCCACTCC | + |
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Preference number: 2 (lower is better) Translates to: KHSRASEVRFGKSVN*VFGFLLGQGGLLHS Trigger: GGAGTGGAGCAGTCCTCCCTGACCCAGGAGGAAGCCAAAAACCAAGTTTACAGACTTACCAAATCTAACCTCGGATGCCCTGCTGTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCTAACTTCAGAAGGGAAGCTGTTTGCTAGTCAAGGAAGGGAAGCCAAGTTAGGCCTGCGGCGTTTATaGGCTGCTCCTAGTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: WLTSEGKLFASQGREAKLGLRRL*AAPSQV Trigger: CACCTGACTAGGAGCAGCTCATAAACGCCGCAGGCC...TAACTTGGCTTCCCTTCCTTGACTAGCAAACAGCTTCCCTTCTGAAGTTAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCATCTCAGCATATCCATGCCAACAAACCAGGCCCAGAATGAGCCACTCTAGTGGATCCTCTGTATaGTTCTGTCTCCAGACGAGC | + |
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Preference number: 2 (lower is better) Translates to: LGISAYPCQQTRPRMSHSSGSSV*FCLQTS Trigger: GCTCGTCTGGAGACAGAAGCATACAGAGGATCCACT...AGAGTGGCTCATTCTGGGCCTGGTTTGTTGGCATGGATATGCTGAGATGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR CCA 90 bp | ACGAGCTTTGCTATTTGTAGAACTGCTGTAAACATTCCTCTCAATGGGACAGCCCTAGAGGGGTGCAGGTaGAGACACCTTCGATGGGCT | + |
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Preference number: 2 (lower is better) Translates to: TSFAICRTAVNIPLNGTALEGCR*RHLRWA Trigger: AGCCCATCGAAGGTGTCTCCACCTGCACCCCTCTAG...GGCTGTCCCATTGAGAGGAATGTTTACAGCAGTTCTACAAATAGCAAAGCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAACTTATCGCTTCTGGTCATACAGTGACCTGTGTCACCTGCCCCACCATCCCTTGGAACTGGAATaGCTGAGTCATCTCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LETYRFWSYSDLCHLPHHPLELE*LSHLSS Trigger: GCTGGAGAGATGACTCAGCCATTCCAGTTCCAAGGG...ATGGTGGGGCAGGTGACACAGGTCACTGTATGACCAGAAGCGATAAGTTTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR CCA 90 bp | GTAGCTCAGGGCTACAGCGTGTGCCTACTTGCACAAGGCCTGGGTTTGATTTTTAAAACACAACAGGAATaGAGTCTGCTGGACTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VAQGYSVCLLAQGLGLIFKTQQE*SLLDCA Trigger: TGCACAGTCCAGCAGACTCCATTCCTGTTGTGTTTT...AAAAATCAAACCCAGGCCTTGTGCAAGTAGGCACACGCTGTAGCCCTGAGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
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| 3UTR-3UTR TCA 90 bp | GAAACTTATCGCTTCTGGTCATACAGTGACCTGTGTCACCTGCCCCACCATTCCATTTATCCTTGGAACTaGAAGGGAAAGGAGCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: ETYRFWSYSDLCHLPHHSIYPWN*KGKEPS Trigger: TGAAGGCTCCTTTCCCTTTCAGTTCCAAGGATAAAT...GGAATGGTGGGGCAGGTGACACAGGTCACTGTATGACCAGAAGCGATAAGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTAACTTCAGAAGGGAAGCTGTTTGCTAGTCAAGGAAGGGAAGCCAAGTTAATACACGAGTGCATGTaGCCACAGAAGCCAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: WLTSEGKLFASQGREAKLIHECM*PQKPEE Trigger: CTCTTCTGGCTTCTGTGGGCACATGCACTCGTGTAT...TAACTTGGCTTCCCTTCCTTGACTAGCAAACAGCTTCCCTTCTGAAGTTAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTCAGGGCTACAGCGTGTGCCTACTTGCACAAGGCCTGGGTTTGATTTTTAAACAAAACAACCATTaGGCCCACAGTACATGCTTA | + |
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Preference number: 2 (lower is better) Translates to: VAQGYSVCLLAQGLGLIFKQNNH*AHSTCL Trigger: TAAGCATGTACTGTGGGCTCAATGGTTGTTTTGTTT...AAAAATCAAACCCAGGCCTTGTGCAAGTAGGCACACGCTGTAGCCCTGAGCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
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| 3UTR-3UTR TCA 90 bp | TTAGAAACTTATCGCTTCTGGTCATACAGTGACCTGTGTCACCTGCCCCACCATCTGTGCTGTCTCGAATaGTTATGCCTGGGTTTATCT | + |
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Preference number: 2 (lower is better) Translates to: LETYRFWSYSDLCHLPHHLCCLE*LCLGLS Trigger: AGATAAACCCAGGCATAATCATTCGAGACAGCACAG...ATGGTGGGGCAGGTGACACAGGTCACTGTATGACCAGAAGCGATAAGTTTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR TCA 90 bp | GAAACTTATCGCTTCTGGTCATACAGTGACCTGTGTCACCTGCCCCACCATTCCCACAAGACAATGGCTTaGTGTTATGGAAATGTGACT | + |
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Preference number: 2 (lower is better) Translates to: ETYRFWSYSDLCHLPHHSHKTMA*CYGNVT Trigger: AGTCACATTTCCATAACATCAAGCCATTGTCTTGTG...GGAATGGTGGGGCAGGTGACACAGGTCACTGTATGACCAGAAGCGATAAGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| 3UTR-3UTR GCA 90 bp | AGCGTGTGCCTACTTGCACAAGGCCTGGGTTTGATTTTTACAGAATTGCAAATCAACAGGAATGGAGTCTaGTGGACTGTGCAACATGGC | + |
|
Preference number: 2 (lower is better) Translates to: SVCLLAQGLGLIFTELQINRNGV*WTVQHG Trigger: GCCATGTTGCACAGTCCAGCAGACTCCATTCCTGTT...GATTTGCAATTCTGTAAAAATCAAACCCAGGCCTTGTGCAAGTAGGCACACGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
||
| 3UTR-3UTR CCA 90 bp | GAAACTTATCGCTTCTGGTCATACAGTGACCTGTGTCACCTGCCCCACCATTCCAAAGAACGTTTCATATaGTTTGCTTTGCCGCATTTG | + |
|
Preference number: 2 (lower is better) Translates to: ETYRFWSYSDLCHLPHHSKERFI*FALPHL Trigger: CAAATGCGGCAAAGCAAACCATATGAAACGTTCTTT...GGAATGGTGGGGCAGGTGACACAGGTCACTGTATGACCAGAAGCGATAAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CAA 90 bp | CCAACGGTATTTATCCTTGGAACTGAAAGGGAAAGGAGCCTTCACTaGACACATTTTGCCTTCCTGTACTCAGGTCTTAAGAATTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PTVFILGTERERSLH*THFAFLYSGLKNSG Trigger: TCCTGAATTCTTAAGACCTGAGTACAGGAAGGCAAAATGTGTCAAGTGAAGGCTCCTTTCCCTTTCAGTTCCAAGGATAAATACCGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR-3UTR GCA 90 bp | CGTACGTCTGCGGTTCTTGCTAGTTCTTTAGAATTTGGTTTTCCAGTAAGCTGGAACGCTTTCAAGTTGTaGTTGCATGTGCATTTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: RTSAVLASSLEFGFPVSWNAFKL*LHVHFL Trigger: TAGGAAATGCACATGCAAGCACAACTTGAAAGCGTT...CCAGCTTACTGGAAAACCAAATTCTAAAGAACTAGCAAGAACCGCAGACGTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTAACTTCAGAAGGGAAGCTGTTTGCTAGTCAAGGAAGGGAAGCCAAGTTAGTCATCTCTCCAGCCTaGGTATTTTTAAAAATGGAA | + |
|
Preference number: 2 (lower is better) Translates to: WLTSEGKLFASQGREAKLVISPA*VFLKME Trigger: TTCCATTTTTAAAAATACCCAGGCTGGAGAGATGAC...TAACTTGGCTTCCCTTCCTTGACTAGCAAACAGCTTCCCTTCTGAAGTTAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CAA 90 bp | GCATATCCATGCCAACAAACCAGGCCCAGAATGAGCCACTCTGACTaGCCAGAAAGCTGTTTTGATATTGCTTTTAATAATAAATCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: AYPCQQTRPRMSHSD*PESCFDIAFNNKSP Trigger: AGGAGATTTATTATTAAAAGCAATATCAAAACAGCTTTCTGGCAAGTCAGAGTGGCTCATTCTGGGCCTGGTTTGTTGGCATGGATATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR-3UTR CCA 90 bp | CATAATATTCAGAGCAAGTGGATGTACTTCAAGATTTCATGGCATTTCATTCACAGGAATGGAGTCTGCTaGACTGTGCAACATGGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: HNIQSKWMYFKISWHFIHRNGVC*TVQHGN Trigger: ATTGCCATGTTGCACAGTCCAGCAGACTCCATTCCT...GTGAATGAAATGCCATGAAATCTTGAAGTACATCCACTTGCTCTGAATATTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
||
| 3UTR CAA 90 bp | TTTATTTTGATGCAATATAATTTAAACTTTCTCTCTATGGGTGTTTaGTCTGCATTCATATCTGTGCACTGTATGCCCTCAGAAGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: FILMQYNLNFLSMGV*SAFISVHCMPSEEG Trigger: GCCCTCTTCTGAGGGCATACAGTGCACAGATATGAATGCAGACAAAACACCCATAGAGAGAAAGTTTAAATTATATTGCATCAAAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | TGGAGACACCTTCGATGGGCTGCAAGCTCCCCACCCTaGCTCTGTGGCTCGGTGGGGCCTGAGGGAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WRHLRWAASSPP*LCGSVGPEGGW Trigger: CCAGCCTCCCTCAGGCCCCACCGAGCCACAGAGGCAGGGTGGGGAGCTTGCAGCCCATCGAAGGTGTCTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | CCCTGCCTCTGTGGCTCGGTGGGGCCTGAGGGAGGCTaGCTGGCAGTTCTGTGGGTAGGTAGGTCCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PCLCGSVGPEGG*LAVLWVGRSWL Trigger: CAGCCAGGACCTACCTACCCACAGAACTGCCAGCCAGCCTCCCTCAGGCCCCACCGAGCCACAGAGGCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | GCTAGAGGGGTGCAGGTGGAGACACCTTCGATGGGCTaGAAGCTCCCCACCCTGCCTCTGTGGCTCGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ARGVQVETPSMG*KLPTLPLWLGG Trigger: CCCACCGAGCCACAGAGGCAGGGTGGGGAGCTTGCAGCCCATCGAAGGTGTCTCCACCTGCACCCCTCTAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | GGGAGGGAGCCTCCTCTCTGGCTAGAGGGGTGCAGGTaGAGACACCTTCGATGGGCTGCAAGCTCCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: GREPPLWLEGCR*RHLRWAASSPP Trigger: GGGTGGGGAGCTTGCAGCCCATCGAAGGTGTCTCCACCTGCACCCCTCTAGCCAGAGAGGAGGCTCCCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | AGGGGTGGGAGGGAGCCTCCTCTCTGGCTAGAGGGGTaGAGGTGGAGACACCTTCGATGGGCTGCAAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RGGREPPLWLEG*RWRHLRWAASS Trigger: GGAGCTTGCAGCCCATCGAAGGTGTCTCCACCTGCACCCCTCTAGCCAGAGAGGAGGCTCCCTCCCACCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | CTCTGGCTAGAGGGGTGCAGGTGGAGACACCTTCGATaGGCTGCAAGCTCCCCACCCTGCCTCTGTGGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LWLEGCRWRHLR*AASSPPCLCGS Trigger: CGAGCCACAGAGGCAGGGTGGGGAGCTTGCAGCCCATCGAAGGTGTCTCCACCTGCACCCCTCTAGCCAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | AGTATGGACCGCAGGGGTGGGAGGGAGCCTCCTCTCTaGCTAGAGGGGTGCAGGTGGAGACACCTTCGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SMDRRGGREPPL*LEGCRWRHLRW Trigger: CCATCGAAGGTGTCTCCACCTGCACCCCTCTAGCCAGAGAGGAGGCTCCCTCCCACCCCTGCGGTCCATACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | AACGTCCTTTGGGCCCTGGGAGCATGCGAGTGGCTCTaGCATCGGTTGAGGTTGGCTACTGGCCTCGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: NVLWALGACEWL*HRLRLATGLVT Trigger: AGTCACGAGGCCAGTAGCCAACCTCAACCGATGGCAGAGCCACTCGCATGCTCCCAGGGCCCAAAGGACGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGCCTCGTGACTCTTCCTTTTGCCTGTAAGGTAACCAGGAGAGGAGGTGGCTACACCGCCTCGTGGTaGTGCGGGTACAATGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TGLVTLPFACKVTRRGGGYTASW*CGYNGA Trigger: GGCTCCATTGTACCCGCACAACCACGAGGCGGTGTA...GCCACCTCCTCTCCTGGTTACCTTACAGGCAAAAGGAAGAGTCACGAGGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | AGGGAAACATTCCCTCTCAAGCCCTTGCCCGTGATGTaGGTTCTGCACGCCCCTCAGCATCAAAAGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RETFPLKPLPVM*VLHAPQHQKGS Trigger: GGAGCCCTTTTGATGCTGAGGGGCGTGCAGAACGCACATCACGGGCAAGGGCTTGAGAGGGAATGTTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | AAAGCCCAGGGTAAAACCAAGCATGGCTTACACACCTaGGATCCCAGCACTCAGGCAGGTAGACACAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KAQGKTKHGLHT*DPSTQAGRHRK Trigger: CTTCCTGTGTCTACCTGCCTGAGTGCTGGGATCGCAGGTGTGTAAGCCATGCTTGGTTTTACCCTGGGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | GTCCCTGTCAGTGGCAATTATATACACGAGTGCATGTaGCCACAGAAGCCAGAAGAGGGCGTCGGATCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VPVSGNYIHECM*PQKPEEGVGSL Trigger: AAGGGATCCGACGCCCTCTTCTGGCTTCTGTGGGCACATGCACTCGTGTATATAATTGCCACTGACAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | AACAGTAACAAAAACGTCCTTTGGGCCCTGGGAGCATaGGAGTGGCTCTGCCATCGGTTGAGGTTGGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: NSNKNVLWALGA*EWLCHRLRLAT Trigger: AGTAGCCAACCTCAACCGATGGCAGAGCCACTCGCATGCTCCCAGGGCCCAAAGGACGTTTTTGTTACTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | GAGGAGGTGGCTGCGTCACACAGAGATGGAAGCAAGTaGATCCTCTGTATGCTTCTGTCTCCAGACGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EEVAASHRDGSK*ILCMLLSPDEL Trigger: AAGCTCGTCTGGAGACAGAAGCATACAGAGGATCCACTTGCTTCCATCTCTGTGTGACGCAGCCACCTCCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | GTATGTGTCCCTGTCAGTGGCAATTATATACACGAGTaGATGTGCCCACAGAAGCCAGAAGAGGGCGTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: VCVPVSGNYIHE*MCPQKPEEGVG Trigger: TCCGACGCCCTCTTCTGGCTTCTGTGGGCACATGCACTCGTGTATATAATTGCCACTGACAGGGACACATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | TCTGTGAGGCAAACTCTGGGCATCTCAGCATATCCATaGCAACAAACCAGGCCCAGAATGAGCCACTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SVRQTLGISAYP*QQTRPRMSHSD Trigger: GTCAGAGTGGCTCATTCTGGGCCTGGTTTGTTGGCATGGATATGCTGAGATGCCCAGAGTTTGCCTCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | GGAACTATAAATGGTTGTGAGCTGTCTCTTTGGTGCTaGGAATCGAACCTGGGCCTTCTGGAGGAGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GTINGCELSLWC*ESNLGLLEEQL Trigger: CAGCTGCTCCTCCAGAAGGCCCAGGTTCGATTCCCAGCACCAAAGAGACAGCTCACAACCATTTATAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR TCA 72 bp | GGGCAGAGTCCTTGGAACTGGAACTATAAATGGTTGTaGGCTGTCTCTTTGGTGCTGGGAATCGAACCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GQSPWNWNYKWL*AVSLVLGIEPG Trigger: CCCAGGTTCGATTCCCAGCACCAAAGAGACAGCTCACAACCATTTATAGTTCCAGTTCCAAGGACTCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | ACTGGAACTATAAATGGTTGTGAGCTGTCTCTTTGGTaGTGGGAATCGAACCTGGGCCTTCTGGAGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TGTINGCELSLW*WESNLGLLEEQ Trigger: CTGCTCCTCCAGAAGGCCCAGGTTCGATTCCCAGCACCAAAGAGACAGCTCACAACCATTTATAGTTCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | AGCCAGAAGAGGGCGTCGGATCCCTTGGAACTGGAATaGCTGAGTCATCTCTCCAGCCTGGGTATTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SQKRASDPLELE*LSHLSSLGIFK Trigger: TTTAAAAATACCCAGGCTGGAGAGATGACTCAGCCATTCCAGTTCCAAGGGATCCGACGCCCTCTTCTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | GGAACAGAACTGCATTCTGTACTGAGATGTGGGAGCTaGGAAGGCTTTGTCCAGCTGGTGTTCAAGTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: GTELHSVLRCGS*EGFVQLVFKSH Trigger: ATGTGACTTGAACACCAGCTGGACAAAGCCTTCCCAGCTCCCACATCTCAGTACAGAATGCAGTTCTGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | AGTCAGTGGAACAGAACTGCATTCTGTACTGAGATGTaGGAGCTGGGAAGGCTTTGTCCAGCTGGTGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SQWNRTAFCTEM*ELGRLCPAGVQ Trigger: TTGAACACCAGCTGGACAAAGCCTTCCCAGCTCCCACATCTCAGTACAGAATGCAGTTCTGTTCCACTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCTACAGCTTGCAGGCAGCTTGGCAGCTAGCCGAGCAGGATTTGAGATTTACAAACTGCTTTCTGATTaGAGGGCAGACAGAGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: YLQLAGSLAASRAGFEIYKLLSD*RADRAL Trigger: AAGGGCTCTGTCTGCCCTCAAATCAGAAAGCAGTTT...GTAAATCTCAAATCCTGCTCGGCTAGCTGCCAAGCTGCCTGCAAGCTGTAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR TCA 72 bp | AGAAGAGGGCGTCGGATCCCTTGGAACTGGAATGGCTaGGTCATCTCTCCAGCCTGGGTATTTTTAAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: RRGRRIPWNWNG*VISPAWVFLKM Trigger: CATTTTTAAAAATACCCAGGCTGGAGAGATGACTCAGCCATTCCAGTTCCAAGGGATCCGACGCCCTCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | CGCTCATCTAATGATGTAGCTCAGGGCTACAGCGTGTaGCTACTTGCACAAGGCCTGGGTTTGATTTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: RSSNDVAQGYSV*LLAQGLGLIFT Trigger: TGTAAAAATCAAACCCAGGCCTTGTGCAAGTAGGCACACGCTGTAGCCCTGAGCTACATCATTAGATGAGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
||
| 3UTR GCA 72 bp | TGGGTGTTTTGTCTGCATTCATATCTGTGCACTGTATaGCCTCAGAAGAGGGCAGAGTCCTTGGAACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: WVFCLHSYLCTV*PQKRAESLELE Trigger: TTCCAGTTCCAAGGACTCTGCCCTCTTCTGAGGGCATACAGTGCACAGATATGAATGCAGACAAAACACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGCATCTCAGCATATCCATGCCAACAAACCAGGCCCAGAATGAGCCACTCTTTTGCTTTGCCGCATTaGGAAACAGTAACAAAAACG | + |
|
Preference number: 3 (lower is better) Translates to: LGISAYPCQQTRPRMSHSFALPH*ETVTKT Trigger: CGTTTTTGTTACTGTTTCCAAATGCGGCAAAGCAAA...AGAGTGGCTCATTCTGGGCCTGGTTTGTTGGCATGGATATGCTGAGATGCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR TCA 72 bp | CCCAGAACAATCAATACAAGCTGTTCAGAAAAGCAGTaGGCAGACCACCTTCCGAAGACCAGTCTAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PRTINTSCSEKQ*ADHLPKTSLRE Trigger: CTCTCTTAGACTGGTCTTCGGAAGGTGGTCTGCTCACTGCTTTTCTGAACAGCTTGTATTGATTGTTCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | CGTCACACAGAGATGGAAGCAAGTGGATCCTCTGTATaGTTCTGTCTCCAGACGAGCTTTGCTATTTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: RHTEMEASGSSV*FCLQTSFAICR Trigger: TCTACAAATAGCAAAGCTCGTCTGGAGACAGAAGCATACAGAGGATCCACTTGCTTCCATCTCTGTGTGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR GCA 72 bp | TTCTCTCTATGGGTGTTTTGTCTGCATTCATATCTGTaGACTGTATGCCCTCAGAAGAGGGCAGAGTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FSLWVFCLHSYL*TVCPQKRAESL Trigger: CAAGGACTCTGCCCTCTTCTGAGGGCATACAGTGCACAGATATGAATGCAGACAAAACACCCATAGAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | TCAGCTGCACAGCTGCCGCTCTCATGTAAACTTTCATaGCTAACTTCAGAAGGGAAGCTGTTTGCTAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SAAQLPLSCKLS*LTSEGKLFASQ Trigger: TTGACTAGCAAACAGCTTCCCTTCTGAAGTTAGCCATGAAAGTTTACATGAGAGCGGCAGCTGTGCAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | TCTAATGGTGCGAAGGTTGCTTTGGAATCGAGTCAGTaGAACAGAACTGCATTCTGTACTGAGATGTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SNGAKVALESSQ*NRTAFCTEMWE Trigger: CTCCCACATCTCAGTACAGAATGCAGTTCTGTTCCACTGACTCGATTCCAAAGCAACCTTCGCACCATTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | CCTGTGCTTTGCCTTCTAATGGTGCGAAGGTTGCTTTaGAATCGAGTCAGTGGAACAGAACTGCATTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PVLCLLMVRRLL*NRVSGTELHSV Trigger: TACAGAATGCAGTTCTGTTCCACTGACTCGATTCCAAAGCAACCTTCGCACCATTAGAAGGCAAAGCACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAACTTATCGCTTCTGGTCATACAGTGACCTGTGTCACCTGCCCCACCATTCCCTAGCCGAGCAGGATTaGAGATTTACTTTTTATACA | + |
|
Preference number: 3 (lower is better) Translates to: ETYRFWSYSDLCHLPHHSLAEQD*RFTFYT Trigger: TGTATAAAAAGTAAATCTCAAATCCTGCTCGGCTAG...GGAATGGTGGGGCAGGTGACACAGGTCACTGTATGACCAGAAGCGATAAGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR TCA 72 bp | GCTACAGCGTGTGCCTACTTGCACAAGGCCTGGGTTTaGTTTTTACAGAATTGCAAATCAACCAACCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: ATACAYLHKAWV*FLQNCKSTNQP Trigger: TGGTTGGTTGGTTGATTTGCAATTCTGTAAAAATCAAACCCAGGCCTTGTGCAAGTAGGCACACGCTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
||
| 3UTR TCA 72 bp | GTGCCCATTAGCTCCAACGGTATTTATCCTTGGAACTaGAAGGGAAAGGAGCCTTCACTTGACACATTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VPISSNGIYPWN*KGKEPSLDTFC Trigger: GCAAAATGTGTCAAGTGAAGGCTCCTTTCCCTTTCAGTTCCAAGGATAAATACCGTTGGAGCTAATGGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | CTTGCTAGTTCTTTAGAATTTGGTTTTCCAGTAAGCTaGTTTGCTCAGCTGCACAGCTGCCGCTCTCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: LASSLEFGFPVS*FAQLHSCRSHV Trigger: TACATGAGAGCGGCAGCTGTGCAGCTGAGCAAACCAGCTTACTGGAAAACCAAATTCTAAAGAACTAGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | CCCCTCAGCATCAAAAGGGCTCCATCGAGTGTACTTTaGATTCAGATTCTCCAAAGTATAAACTGCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLSIKRAPSSVL*IQILQSINCFL Trigger: CAGAAAGCAGTTTATACTTTGGAGAATCTGAATCCAAAGTACACTCGATGGAGCCCTTTTGATGCTGAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | CTGTATCTTAATGGTATCTACAGCTTGCAGGCAGCTTaGCAGCTAGCCGAGCAGGATTTGAGATTTACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LYLNGIYSLQAA*QLAEQDLRFTF Trigger: AAAAGTAAATCTCAAATCCTGCTCGGCTAGCTGCCAAGCTGCCTGCAAGCTGTAGATACCATTAAGATACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR TCA 72 bp | ATAGCTTGCATACAATTTCCCCTTTACCCATTTGGATaGGAGAAACGTACGTCTGCGGTTCTTGCTAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: IACIQFPLYPFG*EKRTSAVLASS Trigger: AGAACTAGCAAGAACCGCAGACGTACGTTTCTCTCATCCAAATGGGTAAAGGGGAAATTGTATGCAAGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR TCA 72 bp | TTATCCTTGGAACTGAAAGGGAAAGGAGCCTTCACTTaGCACATTTTGCCTTCCTGTACTCAGGTCTTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSLELKGKGAFT*HILPSCTQVLR Trigger: TCTTAAGACCTGAGTACAGGAAGGCAAAATGTGTCAAGTGAAGGCTCCTTTCCCTTTCAGTTCCAAGGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR TCA 72 bp | AATGGCACAAGACAATGGCTTGATGTTATGGAAATGTaGCTTCACAGGAAAAGATGGTGCCCATTAGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: NGTRQWLDVMEM*LHRKRWCPLAP Trigger: TGGAGCTAATGGGCACCATCTTTTCCTGTGAAGTCACATTTCCATAACATCAAGCCATTGTCTTGTGCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| 3UTR CCA 72 bp | AGTATGTCAAATATTTCCTTAGAAACTTATCGCTTCTaGTCATACAGTGACCTGTGTCACCTGCCCCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: SMSNISLETYRF*SYSDLCHLPHH Trigger: ATGGTGGGGCAGGTGACACAGGTCACTGTATGACCAGAAGCGATAAGTTTCTAAGGAAATATTTGACATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTGGCAGTTCTGTGGGTAGGTAGGTCCTGGCTGGTAGGCCCCAGGGAACCAGTAGTGCTGCTTTGCTaGGGACTGCAGGGTCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: WLAVLWVGRSWLVGPREPVVLLC*GLQGRR Trigger: ACGCCGACCCTGCAGTCCTCAGCAAAGCAGCACTAC...TGGTTCCCTGGGGCCTACCAGCCAGGACCTACCTACCCACAGAACTGCCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACGCCTTGGCCGGGGCCTaGGCAGGAGGGGCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QNSCKCGLFYTASWLCGYALAGA*AGGAGL Trigger: CAAGCCAGCCCCTCCTGCCCAGGCCCCGGCCAAGGC...GTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTCTAGGAGACTTCCTCCAGCCCCACAACATCAGGAGAATTGGCCTCTGGGCCTTGGCCGGGGCCTaGGCAGGAGGGGCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLGDFLQPHNIRRIGLWALAGA*AGGAGL Trigger: CAAGCCAGCCCCTCCTGCCCAGGCCCCGGCCAAGGC...CCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGGAGGAAGTCTCCTAGAGAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR TCA 90 bp | AGGACTGCTCCACTCCCAACCTCCCCTGAGGACAGAACCTTTGGGGAGCTGGCTGTAGTGCTGCTTTGCTaGGGACTGCAGGGTCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RTAPLPTSPEDRTFGELAVVLLC*GLQGRR Trigger: ACGCCGACCCTGCAGTCCTCAGCAAAGCAGCACTAC...AGCCAGCTCCCCAAAGGTTCTGTCCTCAGGGGAGGTTGGGAGTGGAGCAGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGCTGCCGTGCACAGGCTaGGCAGCTGGAGGTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQNSCKCGLFYTASWLCGLPCTG*AAGGRG Trigger: CCCCCGACCTCCAGCTGCTCAGCCTGTGCACGGCAG...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | CAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACCTGCCGTGCACAGGCTaGGCAGCTGGAGGTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNSCKCGLFYTASWLCGYLPCTG*AAGGRG Trigger: CCCCCGACCTCCAGCTGCTCAGCCTGTGCACGGCAG...GTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTGGCAGTTCTGTGGGTAGGTAGGTCCTGGCTGGTAGGCCCCAGGGAACCAATGGAGGGCTTGGCTTaGCCTCCTGAACATGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WLAVLWVGRSWLVGPREPMEGLA*PPEHGS Trigger: TGAGCCATGTTCAGGAGGGCAAGCCAAGCCCTCCAT...TGGTTCCCTGGGGCCTACCAGCCAGGACCTACCTACCCACAGAACTGCCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGCTGGCTGGCAGTTCTGTGGGTAGGTAGGTCCTGGCTGGTAGGCCCCAGGATGGAAGAAAGTCCTTaGCTGGATTTGGGAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: GGWLAVLWVGRSWLVGPRMEESP*LDLGAR Trigger: GCGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCAT...CCTGGGGCCTACCAGCCAGGACCTACCTACCCACAGAACTGCCAGCCAGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTGCTCCACTCCCAACCTCCCCTGAGGACAGAACCTTTGGGGAGCTGGCTGAGGGATGGGAAGAATaGAGGGCTTGGCTTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTAPLPTSPEDRTFGELAEGWEE*RAWLAL Trigger: GAGGGCAAGCCAAGCCCTCCATTCTTCCCATCCCTC...AGCCAGCTCCCCAAAGGTTCTGTCCTCAGGGGAGGTTGGGAGTGGAGCAGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| 3UTR CAA 72 bp | TGGGCCCTGGGAGCATGCGAGTGGCTCTGCCATCGGTaGAGGTTGGCTACTGGCCTCGTGACTCTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WALGACEWLCHR*RLATGLVTLPF Trigger: AAAAGGAAGAGTCACGAGGCCAGTAGCCAACCTCAACCGATGGCAGAGCCACTCGCATGCTCCCAGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTTTTGGCTTCCTCCTGGGTCAGGGAGGACTGCTCCACTCCCAACCTCCCCTTGTCGACCTGGAGATaGGACCCCATCTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WFLASSWVREDCSTPNLPLSTWR*DPIFSC Trigger: GCAGGAGAAGATGGGGTCTCATCTCCAGGTCGACAA...GGGGAGGTTGGGAGTGGAGCAGTCCTCCCTGACCCAGGAGGAAGCCAAAAACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTTTTGGCTTCCTCCTGGGTCAGGGAGGACTGCTCCACTCCCAACCTCCCCGGTTCCTGTACCCACTaGCTCAGATGGCTTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WFLASSWVREDCSTPNLPGSCTH*LRWLQV Trigger: GACCTGAAGCCATCTGAGTCAGTGGGTACAGGAACC...GGGGAGGTTGGGAGTGGAGCAGTCCTCCCTGACCCAGGAGGAAGCCAAAAACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGCCTCGTGACTCTTCCTTTTGCCTGTAAGGTAACCAGGAGAGGAGGTGGCGGCGTGTCTCTCCTCTaGGAGGAAGCCTGCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGLVTLPFACKVTRRGGGGVSLL*EEACVE Trigger: CTCCACGCAGGCTTCCTCGCAGAGGAGAGACACGCC...GCCACCTCCTCTCCTGGTTACCTTACAGGCAAAAGGAAGAGTCACGAGGCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGGCGAGGGGCGCCAGCTaGACCCTCTGCATGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VQNSCKCGLFYTASWLCGARGAS*TLCMTE Trigger: TTCTGTCATGCAGAGGGTTCAGCTGGCGCCCCTCGC...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | GAAACTTATCGCTTCTGGTCATACAGTGACCTGTGTCACCTGCCCCACCATTCCCTCCTGGGCTGGGTGTaGAAGAAAGGCCTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETYRFWSYSDLCHLPHHSLLGWV*KKGLPG Trigger: CCCGGGGAGGCCTTTCTTTCACACCCAGCCCAGGAG...GGAATGGTGGGGCAGGTGACACAGGTCACTGTATGACCAGAAGCGATAAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTGCTCCACTCCCAACCTCCCCTGAGGACAGAACCTTTGGGGAGCTGGCTCAAGTTCTGGTCCCATaGAGAGGAGGTTCTCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RTAPLPTSPEDRTFGELAQVLVP*RGGSRV Trigger: AACCCGAGAACCTCCTCTGCATGGGACCAGAACTTG...AGCCAGCTCCCCAAAGGTTCTGTCCTCAGGGGAGGTTGGGAGTGGAGCAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGGGCGTGTCTCTCCTCTaGGAGGAAGCCTGCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VQNSCKCGLFYTASWLCGGVSLL*EEACVE Trigger: CTCCACGCAGGCTTCCTCGCAGAGGAGAGACACGCC...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTGCTCCACTCCCAACCTCCCCTGAGGACAGAACCTTTGGGGAGCTGGCTGGGAGCTGTAGTTGGTaGATCTCAGCAGTACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTAPLPTSPEDRTFGELAGSCSW*ISAVPL Trigger: CAGAGGTACTGCTGAGATCCACCAACTACAGCTCCC...AGCCAGCTCCCCAAAGGTTCTGTCCTCAGGGGAGGTTGGGAGTGGAGCAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | GGACTGCTCCACTCCCAACCTCCCCTGAGGACAGAACCTTTGGGGAGCTGGCTGCGGTTGGTCGTTTCTTaGGATCCCACTGAAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLLHSQPPLRTEPLGSWLRLVVS*DPTEAS Trigger: ACTTGCTTCAGTGGGATCCCAAGAAACGACCAACCG...CAGCCAGCTCCCCAAAGGTTCTGTCCTCAGGGGAGGTTGGGAGTGGAGCAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTTTGGCTTCCTCCTGGGTCAGGGAGGACTGCTCCACTCCCAACCTCCCCGCTGATGATGCCCAGTaGGTGTCCGATCTGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: WFLASSWVREDCSTPNLPADDAQ*VSDLEV Trigger: TACTTCCAGATCGGACACCCACTGGGCATCATCAGC...GGGGAGGTTGGGAGTGGAGCAGTCCTCCCTGACCCAGGAGGAAGCCAAAAACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| 3UTR CAA 72 bp | TGTGCCCACAGAAGCCAGAAGAGGGCGTCGGATCCCTaGGAACTGGAATGGCTGAGTCATCTCTCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CAHRSQKRASDP*ELEWLSHLSSL Trigger: CAGGCTGGAGAGATGACTCAGCCATTCCAGTTCCAAGGGATCCGACGCCCTCTTCTGGCTTCTGTGGGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR TCA 90 bp | GAAACTTATCGCTTCTGGTCATACAGTGACCTGTGTCACCTGCCCCACCATTCCGCGAGGGGCGCCAGCTaGACCCTCTGCATGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETYRFWSYSDLCHLPHHSARGAS*TLCMTE Trigger: TTCTGTCATGCAGAGGGTTCAGCTGGCGCCCCTCGC...GGAATGGTGGGGCAGGTGACACAGGTCACTGTATGACCAGAAGCGATAAGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR GCA 90 bp | GGACTGCTCCACTCCCAACCTCCCCTGAGGACAGAACCTTTGGGGAGCTGGCTGCCTCCCGAAGGTTCATaGATTCTTCCCAGGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLLHSQPPLRTEPLGSWLPPEGS*ILPRSK Trigger: TTTACTCCTGGGAAGAATGCATGAACCTTCGGGAGG...CAGCCAGCTCCCCAAAGGTTCTGTCCTCAGGGGAGGTTGGGAGTGGAGCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGGCCTTGGCCGGGGCCTaGGCAGGAGGGGCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWALAGA*AGGAGL Trigger: CAAGCCAGCCCCTCCTGCCCAGGCCCCGGCCAAGGC...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTGCTCCACTCCCAACCTCCCCTGAGGACAGAACCTTTGGGGAGCTGGCTCTTATTGTGGAGGGATaGGAAGAATGGAGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTAPLPTSPEDRTFGELALIVEG*EEWRAW Trigger: CCAAGCCCTCCATTCTTCCCATCCCTCCACAATAAG...AGCCAGCTCCCCAAAGGTTCTGTCCTCAGGGGAGGTTGGGAGTGGAGCAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCTGGCTGGCAGTTCTGTGGGTAGGTAGGTCCTGGCTGGTAGGCCCCAGGTTTTCTGTTCCAGGCTaGCTAGGATTTTTGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGWLAVLWVGRSWLVGPRFSVPG*LGFLAE Trigger: TTCAGCCAAAAATCCTAGCCAGCCTGGAACAGAAAA...CCTGGGGCCTACCAGCCAGGACCTACCTACCCACAGAACTGCCAGCCAGCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGGACTGCTCCACTCCCAACCTCCCCTGAGGACAGAACCTTTGGGGAGCGTCCTTGCCTGGATTTaGGAGCACGCCATTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QGGLLHSQPPLRTEPLGSVLAWI*EHAISY Trigger: ATAAGAAATGGCGTGCTCCCAAATCCAGGCAAGGAC...GCTCCCCAAAGGTTCTGTCCTCAGGGGAGGTTGGGAGTGGAGCAGTCCTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAGCCGGGCGTGCTCCTaGGCTGGGTGTGAAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QNSCKCGLFYTASWLCGYSRACS*AGCERK Trigger: CTTTCTTTCACACCCAGCCCAGGAGCACGCCCGGCT...GTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAACTGAAGAGATGCCTGCGTCTCAGACAGAAGGGCCCCATGCCATAGTTCTCTGCGAGGAAGCCTaGGTGGAGACAGTGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RETEEMPASQTEGPHAIVLCEEA*VETVVP Trigger: AGGAACCACTGTCTCCACGCAGGCTTCCTCGCAGAG...AACTATGGCATGGGGCCCTTCTGTCTGAGACGCAGGCATCTCTTCAGTTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCCACAACATCAGGAGAATTGGCCTCTGGTCACTCAGGAGTTAATAACTGGCGTGTCTCTCCTCTaGGAGGAAGCCTGCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAPQHQENWPLVTQELITGVSLL*EEACVE Trigger: CTCCACGCAGGCTTCCTCGCAGAGGAGAGACACGCC...AGTTATTAACTCCTGAGTGACCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGGAGGGATGGGAAGAATaGAGGGCTTGGCTTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQNSCKCGLFYTASWLCGEGWEE*RAWLAL Trigger: GAGGGCAAGCCAAGCCCTCCATTCTTCCCATCCCTC...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGCTACAGCGTGTGCCTACTTGCACAAGGCCTGGGTTTGATTTTTACAGAAACAGGATGCTGGAGGTaGAGGAGGTTGGGGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGYSVCLLAQGLGLIFTETGCWR*RRLGSH Trigger: GTGGCTCCCCAACCTCCTTCACCTCCAGCATCCTGT...TTCTGTAAAAATCAAACCCAGGCCTTGTGCAAGTAGGCACACGCTGTAGCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
||
| CDS-3UTR TCA 90 bp | AGGACTGCTCCACTCCCAACCTCCCCTGAGGACAGAACCTTTGGGGAGCTGGCTAAGAAACCGTGTTTGTaGATGAATGCCAGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTAPLPTSPEDRTFGELAKKPCL*MNASPC Trigger: GCAAGGACTGGCATTCATTCACAAACACGGTTTCTT...AGCCAGCTCCCCAAAGGTTCTGTCCTCAGGGGAGGTTGGGAGTGGAGCAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCCTGTAAGGTAACCAGGAGAGGAGGTGGCTGCGTCACACAGAGATGGAAGGGTTCCTGTACCCACTaGCTCAGATGGCTTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FACKVTRRGGGCVTQRWKGSCTH*LRWLQV Trigger: GACCTGAAGCCATCTGAGTCAGTGGGTACAGGAACC...CTTCCATCTCTGTGTGACGCAGCCACCTCCTCTCCTGGTTACCTTACAGGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGCCTCGTGACTCTTCCTTTTGCCTGTAAGGTAACCAGGAGAGGAGGTGGCCAAGTTCTGGTCCCATaGAGAGGAGGTTCTCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGLVTLPFACKVTRRGGGQVLVP*RGGSRV Trigger: AACCCGAGAACCTCCTCTGCATGGGACCAGAACTTG...GCCACCTCCTCTCCTGGTTACCTTACAGGCAAAAGGAAGAGTCACGAGGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR GCA 90 bp | CAGACTAACACTGACTTTAGGAGCCAGGTGTCCAAAGCACAGCAGGGCATCCGAATGGAGGGCTTGGCTTaGCCTCCTGAACATGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTNTDFRSQVSKAQQGIRMEGLA*PPEHGS Trigger: TGAGCCATGTTCAGGAGGGCAAGCCAAGCCCTCCAT...TCGGATGCCCTGCTGTGCTTTGGACACCTGGCTCCTAAAGTCAGTGTTAGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR GCA 90 bp | GAAACTTATCGCTTCTGGTCATACAGTGACCTGTGTCACCTGCCCCACCATTCCCTCTGCGAGGAAGCCTaGGTGGAGACAGTGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ETYRFWSYSDLCHLPHHSLCEEA*VETVVP Trigger: AGGAACCACTGTCTCCACGCAGGCTTCCTCGCAGAG...GGAATGGTGGGGCAGGTGACACAGGTCACTGTATGACCAGAAGCGATAAGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAAGACCAGTCTATCCTaGCGTGCACAGGCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QNSCKCGLFYTASWLCGYKTSLS*RAQAEQ Trigger: CTGCTCAGCCTGTGCACGGCAGGATAGACTGGTCTT...GTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGGAAGTCCAGCAGAGAAGTCCAGACTAACACTGACTTTAGGAGCCAGGCCGCCCAGATGTCAATaGGGGAGCTGTAGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSGSPAEKSRLTLTLGARPPRCQ*GSCSWW Trigger: CCACCAACTACAGCTCCCCCATTGACATCTGGGCGG...CCTGGCTCCTAAAGTCAGTGTTAGTCTGGACTTCTCTGCTGGACTTCCTGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTTTGGCTTCCTCCTGGGTCAGGGAGGACTGCTCCACTCCCAACCTCCCCGAGTCTTTAAGTTATTaGGTATGCACTGGGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WFLASSWVREDCSTPNLPESLSY*VCTGAR Trigger: TCTGGCCCCAGTGCATACCCAATAACTTAAAGACTC...GGGGAGGTTGGGAGTGGAGCAGTCCTCCCTGACCCAGGAGGAAGCCAAAAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | GGACTGCTCCACTCCCAACCTCCCCTGAGGACAGAACCTTTGGGGAGCTGGCTGTTTTCTGTTCCAGGCTaGCTAGGATTTTTGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLLHSQPPLRTEPLGSWLFSVPG*LGFLAE Trigger: TTCAGCCAAAAATCCTAGCCAGCCTGGAACAGAAAA...CAGCCAGCTCCCCAAAGGTTCTGTCCTCAGGGGAGGTTGGGAGTGGAGCAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACCCTGCGTGGAGACAGTaGTTCCTGTACCCACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: QNSCKCGLFYTASWLCGYPAWRQ*FLYPLT Trigger: AGTCAGTGGGTACAGGAACCACTGTCTCCACGCAGG...GTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGGCCGGGATGGGTACTTaGAAGACCAGTCTATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQNSCKCGLFYTASWLCGAGMGT*KTSLSC Trigger: GCAGGATAGACTGGTCTTCCAAGTACCCATCCCGGC...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGAAGTCTCTCAGGAGCTaGATGGCTTCGCTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQNSCKCGLFYTASWLCGKSLRS*MASLLA Trigger: TGCTAGCAGCGAAGCCATTCAGCTCCTGAGAGACTT...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAACTGAAGAGATGCCTGCGTCTCAGACAGAAGGGCCCCATGCCATAGTTAAGTCTCTCAGGAGCTaGATGGCTTCGCTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RETEEMPASQTEGPHAIVKSLRS*MASLLA Trigger: TGCTAGCAGCGAAGCCATTCAGCTCCTGAGAGACTT...AACTATGGCATGGGGCCCTTCTGTCTGAGACGCAGGCATCTCTTCAGTTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTTCTTGGGATCCCACTaGAGCAAGTCTCTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VQNSCKCGLFYTASWLCGFLGSH*SKSLRS Trigger: GCTCCTGAGAGACTTGCTTCAGTGGGATCCCAAGAA...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTGGCAGTTCTGTGGGTAGGTAGGTCCTGGCTGGTAGGCCCCAGGGAACCATCCTGCTCTTTGGCTTaGTTTCACCATTTTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WLAVLWVGRSWLVGPREPSCSLA*FHHFSV Trigger: AACAGAAAAATGGTGAAATCAAGCCAAAGAGCAGGA...TGGTTCCCTGGGGCCTACCAGCCAGGACCTACCTACCCACAGAACTGCCAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGGACTGCTCCACTCCCAACCTCCCCTGAGGACAGAACCTTTGGGGAGCTCCTGCTCTTTGGCTTaGTTTCACCATTTTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGGLLHSQPPLRTEPLGSSCSLA*FHHFSV Trigger: AACAGAAAAATGGTGAAATCAAGCCAAAGAGCAGGA...GCTCCCCAAAGGTTCTGTCCTCAGGGGAGGTTGGGAGTGGAGCAGTCCTCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR TCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGCTCCTGGGCTGGGTGTaGAAGAAAGGCCTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWLLGWV*KKGLPG Trigger: CCCGGGGAGGCCTTTCTTTCACACCCAGCCCAGGAG...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCTCAGGGCTACAGCGTGTGCCTACTTGCACAAGGCCTGGGTTTGATTTTTGGAGGTGAAGGAGGTTaGGGAGCCACAGGATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VAQGYSVCLLAQGLGLIFGGEGG*GATGFS Trigger: GGAAAATCCTGTGGCTCCCCAACCTCCTTCACCTCC...AAAAATCAAACCCAGGCCTTGTGCAAGTAGGCACACGCTGTAGCCCTGAGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
||
| CDS-3UTR CCA 90 bp | AACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAATCCGCCCAGATGTCAATaGGGGAGCTGTAGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSCKCGLFYTASWLCGYNPPRCQ*GSCSWW Trigger: CCACCAACTACAGCTCCCCCATTGACATCTGGGCGG...ATTGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTCTAGGAGACTTCCTCCAGCCCCACAACATCAGGAGAATTGGCCTCTGGAGCCTGACTAGCGGTTaGTCGTTTCTTGGGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLGDFLQPHNIRRIGLWSLTSG*SFLGIP Trigger: TGGGATCCCAAGAAACGACCAACCGCTAGTCAGGCT...CCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGGAGGAAGTCTCCTAGAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAGCCTGACTAGCGGTTaGTCGTTTCTTGGGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNSCKCGLFYTASWLCGYSLTSG*SFLGIP Trigger: TGGGATCCCAAGAAACGACCAACCGCTAGTCAGGCT...GTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAGGAAGTCCAGCAGAGAAGTCCAGACTAACACTGACTTTAGGAGCCAGGTTCTTGGGATCCCACTaGAGCAAGTCTCTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSGSPAEKSRLTLTLGARFLGSH*SKSLRS Trigger: GCTCCTGAGAGACTTGCTTCAGTGGGATCCCAAGAA...CCTGGCTCCTAAAGTCAGTGTTAGTCTGGACTTCTCTGCTGGACTTCCTGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR GCA 90 bp | AGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAGTTCTCCAGACTCAATaGTTCTCCCCAGCAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RTAVSVGCFTPPRGCAGTVLQTQ*FSPAGQ Trigger: CTGTCCTGCTGGGGAGAAGCATTGAGTCTGGAGAAC...TGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGCCTCGTGACTCTTCCTTTTGCCTGTAAGGTAACCAGGAGAGGAGGTGGCCCAGTCAGTCTTCTTTaGTGTTCCCAACACTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGLVTLPFACKVTRRGGGPVSLL*CSQHLA Trigger: TGCCAAGTGTTGGGAACACCAAAGAAGACTGACTGG...GCCACCTCCTCTCCTGGTTACCTTACAGGCAAAAGGAAGAGTCACGAGGCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAGCTGATGATGCCCAGTaGGTGTCCGATCTGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RTAVSVGCFTPPRGCAGTADDAQ*VSDLEV Trigger: TACTTCCAGATCGGACACCCACTGGGCATCATCAGC...TGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCTCACCAGAGCAACAGGTGACTACAACTCTGCCATCTCTCTGTCTGCCCCTGCGTGGAGACAGTaGTTCCTGTACCCACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KKLTRATGDYNSAISLSAPAWRQ*FLYPLT Trigger: AGTCAGTGGGTACAGGAACCACTGTCTCCACGCAGG...GGCAGACAGAGAGATGGCAGAGTTGTAGTCACCTGTTGCTCTGGTGAGCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCCACAACATCAGGAGAATTGGCCTCTGGTCACTCAGGAGTTAATAACTCCTGCGTGGAGACAGTaGTTCCTGTACCCACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PAPQHQENWPLVTQELITPAWRQ*FLYPLT Trigger: AGTCAGTGGGTACAGGAACCACTGTCTCCACGCAGG...AGTTATTAACTCCTGAGTGACCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTAACTTCAGAAGGGAAGCTGTTTGCTAGTCAAGGAAGGGAAGCCAAGTTAAGCCGGGCGTGCTCCTaGGCTGGGTGTGAAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLTSEGKLFASQGREAKLSRACS*AGCERK Trigger: CTTTCTTTCACACCCAGCCCAGGAGCACGCCCGGCT...TAACTTGGCTTCCCTTCCTTGACTAGCAAACAGCTTCCCTTCTGAAGTTAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR TCA 90 bp | CAGACTAACACTGACTTTAGGAGCCAGGTGTCCAAAGCACAGCAGGGCATCCGAGAAATTCATAGCACTTaGCAGCTGGTAGCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTNTDFRSQVSKAQQGIREIHST*QLVAFR Trigger: CCTGAAGGCTACCAGCTGTCAAGTGCTATGAATTTC...TCGGATGCCCTGCTGTGCTTTGGACACCTGGCTCCTAAAGTCAGTGTTAGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGGAAATTCATAGCACTTaGCAGCTGGTAGCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQNSCKCGLFYTASWLCGEIHST*QLVAFR Trigger: CCTGAAGGCTACCAGCTGTCAAGTGCTATGAATTTC...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGGTAGTGCTGCTTTGCTaGGGACTGCAGGGTCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWVVLLC*GLQGRR Trigger: ACGCCGACCCTGCAGTCCTCAGCAAAGCAGCACTAC...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCCTGTAAGGTAACCAGGAGAGGAGGTGGCTGCGTCACACAGAGATGGAAGGCTGAACCCTCTGCATaGCAGAACCGATTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FACKVTRRGGGCVTQRWKAEPSA*QNRFPF Trigger: AAAAGGAAATCGGTTCTGTCATGCAGAGGGTTCAGC...CTTCCATCTCTGTGTGACGCAGCCACCTCCTCTCCTGGTTACCTTACAGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAACTGAAGAGATGCCTGCGTCTCAGACAGAAGGGCCCCATGCCATAGTTGTCCCATCCCCAAGCTaGTTGATCGTTGTGTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: RETEEMPASQTEGPHAIVVPSPS*LIVVYL Trigger: TAGATACACAACGATCAAGCAGCTTGGGGATGGGAC...AACTATGGCATGGGGCCCTTCTGTCTGAGACGCAGGCATCTCTTCAGTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCCACAACATCAGGAGAATTGGCCTCTGGTCACTCAGGAGTTAATAACTGTTCTCCAGACTCAATaGTTCTCCCCAGCAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PAPQHQENWPLVTQELITVLQTQ*FSPAGQ Trigger: CTGTCCTGCTGGGGAGAAGCATTGAGTCTGGAGAAC...AGTTATTAACTCCTGAGTGACCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR GCA 90 bp | GTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGCTCTGCGAGGAAGCCTaGGTGGAGACAGTGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLVQNSCKCGLFYTASWLLCEEA*VETVVP Trigger: AGGAACCACTGTCTCCACGCAGGCTTCCTCGCAGAG...CAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | AGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAATGGAAGAAAGTCCTTaGCTGGATTTGGGAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: RTAVSVGCFTPPRGCAGTMEESP*LDLGAR Trigger: GCGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCAT...TGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
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| CDS-3UTR CCA 90 bp | TATCTACAGCTTGCAGGCAGCTTGGCAGCTAGCCGAGCAGGATTTGAGATTTACGGGAGCTGTAGTTGGTaGATCTCAGCAGTACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YLQLAGSLAASRAGFEIYGSCSW*ISAVPL Trigger: CAGAGGTACTGCTGAGATCCACCAACTACAGCTCCC...GTAAATCTCAAATCCTGCTCGGCTAGCTGCCAAGCTGCCTGCAAGCTGTAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CCA 90 bp | AACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAATTGGGGGAGCTGTAGTTaGTGGATCTCAGCAGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: NSCKCGLFYTASWLCGYNWGSCS*WISAVP Trigger: AGGTACTGCTGAGATCCACCAACTACAGCTCCCCCA...ATTGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
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| CDS-3UTR CCA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGCCAGTCAGTCTTCTTTaGTGTTCCCAACACTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQNSCKCGLFYTASWLCGPVSLL*CSQHLA Trigger: TGCCAAGTGTTGGGAACACCAAAGAAGACTGACTGG...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGCATCTCAGCATATCCATGCCAACAAACCAGGCCCAGAATGAGCCACTCTCATCCCCAAGCTGCTTaGTCGTTGTGTATCTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGISAYPCQQTRPRMSHSHPQAA*SLCIYS Trigger: TGAATAGATACACAACGATCAAGCAGCTTGGGGATG...AGAGTGGCTCATTCTGGGCCTGGTTTGTTGGCATGGATATGCTGAGATGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
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| CDS-3UTR TCA 90 bp | TTTGCCTGTAAGGTAACCAGGAGAGGAGGTGGCTGCGTCACACAGAGATGGAAGAAGAAACCGTGTTTGTaGATGAATGCCAGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FACKVTRRGGGCVTQRWKKKPCL*MNASPC Trigger: GCAAGGACTGGCATTCATTCACAAACACGGTTTCTT...CTTCCATCTCTGTGTGACGCAGCCACCTCCTCTCCTGGTTACCTTACAGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR GCA 90 bp | AGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAGTCCCATCCCCAAGCTaGTTGATCGTTGTGTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: RTAVSVGCFTPPRGCAGTVPSPS*LIVVYL Trigger: TAGATACACAACGATCAAGCAGCTTGGGGATGGGAC...TGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | AGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACACCTCCCGAAGGTTCATaGATTCTTCCCAGGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RTAVSVGCFTPPRGCAGTPPEGS*ILPRSK Trigger: TTTACTCCTGGGAAGAATGCATGAACCTTCGGGAGG...TGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGCCGCCCAGATGTCAATaGGGGAGCTGTAGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWPPRCQ*GSCSWW Trigger: CCACCAACTACAGCTCCCCCATTGACATCTGGGCGG...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGGAGTCTTTAAGTTATTaGGTATGCACTGGGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQNSCKCGLFYTASWLCGESLSY*VCTGAR Trigger: TCTGGCCCCAGTGCATACCCAATAACTTAAAGACTC...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | ACGAGCTTTGCTATTTGTAGAACTGCTGTAAACATTCCTCTCAATGGGACAGCCGAGGGATGGGAAGAATaGAGGGCTTGGCTTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSFAICRTAVNIPLNGTAEGWEE*RAWLAL Trigger: GAGGGCAAGCCAAGCCCTCCATTCTTCCCATCCCTC...GGCTGTCCCATTGAGAGGAATGTTTACAGCAGTTCTACAAATAGCAAAGCTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTCTAGGAGACTTCCTCCAGCCCCACAACATCAGGAGAATTGGCCTCTGGCAGACAAGCCGGAACTaGACCATGAATTTGATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLGDFLQPHNIRRIGLWQTSRN*TMNLME Trigger: TTCCATCAAATTCATGGTCCAGTTCCGGCTTGTCTG...CCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGGAGGAAGTCTCCTAGAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACCAGACAAGCCGGAACTaGACCATGAATTTGATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QNSCKCGLFYTASWLCGYQTSRN*TMNLME Trigger: TTCCATCAAATTCATGGTCCAGTTCCGGCTTGTCTG...GTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | GTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGGCCGGGATGGGTACTTaGAAGACCAGTCTATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLVQNSCKCGLFYTASWLAGMGT*KTSLSC Trigger: GCAGGATAGACTGGTCTTCCAAGTACCCATCCCGGC...CAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| 3UTR CAA 72 bp | AGGGCATCCGAGGTTAGATTTGGTAAGTCTGTAAACTaGGTTTTTGGCTTCCTCCTGGGTCAGGGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: RASEVRFGKSVN*VFGFLLGQGGL Trigger: CAGTCCTCCCTGACCCAGGAGGAAGCCAAAAACCAAGTTTACAGACTTACCAAATCTAACCTCGGATGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGCATCTCAGCATATCCATGCCAACAAACCAGGCCCAGAATGAGCCACTCTAACCGTGTTTGTGAATaGATGCCAGTCCTTGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: LGISAYPCQQTRPRMSHSNRVCE*MPVLAI Trigger: TATTGCAAGGACTGGCATTCATTCACAAACACGGTT...AGAGTGGCTCATTCTGGGCCTGGTTTGTTGGCATGGATATGCTGAGATGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR TCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTCGACCTGGAGATaGGACCCCATCTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWLSTWR*DPIFSC Trigger: GCAGGAGAAGATGGGGTCTCATCTCCAGGTCGACAA...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGGGTTCCTGTACCCACTaGCTCAGATGGCTTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWGSCTH*LRWLQV Trigger: GACCTGAAGCCATCTGAGTCAGTGGGTACAGGAACC...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | TCGGATCCCTTGGAACTGGAATGGCTGAGTCATCTCTCCAGCCTGGGTATTTTTGTCCCATCCCCAAGCTaGTTGATCGTTGTGTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: SDPLELEWLSHLSSLGIFVPSPS*LIVVYL Trigger: TAGATACACAACGATCAAGCAGCTTGGGGATGGGAC...AAAAATACCCAGGCTGGAGAGATGACTCAGCCATTCCAGTTCCAAGGGATCCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR GCA 90 bp | AACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAATCCTCCCGAAGGTTCATaGATTCTTCCCAGGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: NSCKCGLFYTASWLCGYNPPEGS*ILPRSK Trigger: TTTACTCCTGGGAAGAATGCATGAACCTTCGGGAGG...ATTGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTCTAGGAGACTTCCTCCAGCCCCACAACATCAGGAGAATTGGCCTCTGGTTAAGTTATTGGGTATaGACTGGGGCCAGAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLGDFLQPHNIRRIGLWLSYWV*TGARGN Trigger: ATTTCCTCTGGCCCCAGTGCATACCCAATAACTTAA...CCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGGAGGAAGTCTCCTAGAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACTTAAGTTATTGGGTATaGACTGGGGCCAGAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QNSCKCGLFYTASWLCGYLSYWV*TGARGN Trigger: ATTTCCTCTGGCCCCAGTGCATACCCAATAACTTAA...GTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGATGGAGGGCTTGGCTTaGCCTCCTGAACATGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWMEGLA*PPEHGS Trigger: TGAGCCATGTTCAGGAGGGCAAGCCAAGCCCTCCAT...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGAAGACCAGTCTATCCTaGCGTGCACAGGCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWKTSLS*RAQAEQ Trigger: CTGCTCAGCCTGTGCACGGCAGGATAGACTGGTCTT...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTAACTTCAGAAGGGAAGCTGTTTGCTAGTCAAGGAAGGGAAGCCAAGTTAAGCCTGACTAGCGGTTaGTCGTTTCTTGGGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WLTSEGKLFASQGREAKLSLTSG*SFLGIP Trigger: TGGGATCCCAAGAAACGACCAACCGCTAGTCAGGCT...TAACTTGGCTTCCCTTCCTTGACTAGCAAACAGCTTCCCTTCTGAAGTTAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CCA 90 bp | AACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAATGTCCTTGCCTGGATTTaGGAGCACGCCATTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NSCKCGLFYTASWLCGYNVLAWI*EHAISY Trigger: ATAAGAAATGGCGTGCTCCCAAATCCAGGCAAGGAC...ATTGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| 3UTR CAA 72 bp | TTACCCCCTGTGCTTTGCCTTCTAATGGTGCGAAGGTaGCTTTGGAATCGAGTCAGTGGAACAGAACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPPVLCLLMVRR*LWNRVSGTELH Trigger: ATGCAGTTCTGTTCCACTGACTCGATTCCAAAGCAACCTTCGCACCATTAGAAGGCAAAGCACAGGGGGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR TCA 90 bp | AACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAATAAGAAACCGTGTTTGTaGATGAATGCCAGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSCKCGLFYTASWLCGYNKKPCL*MNASPC Trigger: GCAAGGACTGGCATTCATTCACAAACACGGTTTCTT...ATTGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTCTTGGGATCCCACTaGAGCAAGTCTCTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWFLGSH*SKSLRS Trigger: GCTCCTGAGAGACTTGCTTCAGTGGGATCCCAAGAA...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | CAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACTCCTGCTCTTTGGCTTaGTTTCACCATTTTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QNSCKCGLFYTASWLCGYSCSLA*FHHFSV Trigger: AACAGAAAAATGGTGAAATCAAGCCAAAGAGCAGGA...GTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACGTGTTTGTGAATGAATaGCAGTCCTTGCAATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNSCKCGLFYTASWLCGYVFVNE*QSLQYL Trigger: CAGATATTGCAAGGACTGGCATTCATTCACAAACAC...GTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTCTAGGAGACTTCCTCCAGCCCCACAACATCAGGAGAATTGGCCTCTGGGTGTTTGTGAATGAATaGCAGTCCTTGCAATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLGDFLQPHNIRRIGLWVFVNE*QSLQYL Trigger: CAGATATTGCAAGGACTGGCATTCATTCACAAACAC...CCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGGAGGAAGTCTCCTAGAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR GCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGCAAGTTCTGGTCCCATaGAGAGGAGGTTCTCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWQVLVP*RGGSRV Trigger: AACCCGAGAACCTCCTCTGCATGGGACCAGAACTTG...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCAAAGCACAGCAGGGCATCCGAGGTTAGATTTGGTAAGTCTGTAAACTTGATGGAAGAAAGTCCTTaGCTGGATTTGGGAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: CPKHSRASEVRFGKSVNLMEESP*LDLGAR Trigger: GCGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCAT...CAAGTTTACAGACTTACCAAATCTAACCTCGGATGCCCTGCTGTGCTTTGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGGGGAGCTGTAGTTGGTaGATCTCAGCAGTACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWGSCSW*ISAVPL Trigger: CAGAGGTACTGCTGAGATCCACCAACTACAGCTCCC...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | TCGGATCCCTTGGAACTGGAATGGCTGAGTCATCTCTCCAGCCTGGGTATTTTTGAGTCTTTAAGTTATTaGGTATGCACTGGGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDPLELEWLSHLSSLGIFESLSY*VCTGAR Trigger: TCTGGCCCCAGTGCATACCCAATAACTTAAAGACTC...AAAAATACCCAGGCTGGAGAGATGACTCAGCCATTCCAGTTCCAAGGGATCCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CCA 90 bp | GTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGCGGTTGGTCGTTTCTTaGGATCCCACTGAAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLVQNSCKCGLFYTASWLRLVVS*DPTEAS Trigger: ACTTGCTTCAGTGGGATCCCAAGAAACGACCAACCG...CAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGGCTGATGATGCCCAGTaGGTGTCCGATCTGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWADDAQ*VSDLEV Trigger: TACTTCCAGATCGGACACCCACTGGGCATCATCAGC...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTAACTTCAGAAGGGAAGCTGTTTGCTAGTCAAGGAAGGGAAGCCAAGTTACTTATTGTGGAGGGATaGGAAGAATGGAGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLTSEGKLFASQGREAKLLIVEG*EEWRAW Trigger: CCAAGCCCTCCATTCTTCCCATCCCTCCACAATAAG...TAACTTGGCTTCCCTTCCTTGACTAGCAAACAGCTTCCCTTCTGAAGTTAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CCA 90 bp | GTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGCTTATTGTGGAGGGATaGGAAGAATGGAGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLVQNSCKCGLFYTASWLLIVEG*EEWRAW Trigger: CCAAGCCCTCCATTCTTCCCATCCCTCCACAATAAG...CAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | TATCTACAGCTTGCAGGCAGCTTGGCAGCTAGCCGAGCAGGATTTGAGATTTACCAGACAAGCCGGAACTaGACCATGAATTTGATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YLQLAGSLAASRAGFEIYQTSRN*TMNLME Trigger: TTCCATCAAATTCATGGTCCAGTTCCGGCTTGTCTG...GTAAATCTCAAATCCTGCTCGGCTAGCTGCCAAGCTGCCTGCAAGCTGTAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR TCA 90 bp | GTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGGCTGAACCCTCTGCATaGCAGAACCGATTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLVQNSCKCGLFYTASWLAEPSA*QNRFPF Trigger: AAAAGGAAATCGGTTCTGTCATGCAGAGGGTTCAGC...CAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTCTAGGAGACTTCCTCCAGCCCCACAACATCAGGAGAATTGGCCTCTGGTGCCTGAAGTTATTTTaGTCACTACTGATACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLGDFLQPHNIRRIGLWCLKLF*SLLILF Trigger: GAACAGTATCAGTAGTGAGCAAAATAACTTCAGGCA...CCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGGAGGAAGTCTCCTAGAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAAGCACAGCAGGGCATCCGAGGTTAGATTTGGTAAGTCTGTAAACTTGCCAGTCAGTCTTCTTTaGTGTTCCCAACACTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPKHSRASEVRFGKSVNLPVSLL*CSQHLA Trigger: TGCCAAGTGTTGGGAACACCAAAGAAGACTGACTGG...CAAGTTTACAGACTTACCAAATCTAACCTCGGATGCCCTGCTGTGCTTTGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCCAGAACAATCAATACAAGCTGTTCAGAAAAGCAGTGAGCAGACCACCTTATTGGGTATGCACTaGGGCCAGAGGAAATTCATA | + |
|
Preference number: 4 (lower is better) Translates to: PPPEQSIQAVQKSSEQTTLLGMH*GQRKFI Trigger: TATGAATTTCCTCTGGCCCCAGTGCATACCCAATAA...GGTGGTCTGCTCACTGCTTTTCTGAACAGCTTGTATTGATTGTTCTGGGGGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGCGGTTGGTCGTTTCTTaGGATCCCACTGAAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWRLVVS*DPTEAS Trigger: ACTTGCTTCAGTGGGATCCCAAGAAACGACCAACCG...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | AACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAATTTTTCTGTTCCAGGCTaGCTAGGATTTTTGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NSCKCGLFYTASWLCGYNFSVPG*LGFLAE Trigger: TTCAGCCAAAAATCCTAGCCAGCCTGGAACAGAAAA...ATTGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCAAAGCACAGCAGGGCATCCGAGGTTAGATTTGGTAAGTCTGTAAACTTGCATCCCCAAGCTGCTTaGTCGTTGTGTATCTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: CPKHSRASEVRFGKSVNLHPQAA*SLCIYS Trigger: TGAATAGATACACAACGATCAAGCAGCTTGGGGATG...CAAGTTTACAGACTTACCAAATCTAACCTCGGATGCCCTGCTGTGCTTTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR TCA 90 bp | ACGAGCTTTGCTATTTGTAGAACTGCTGTAAACATTCCTCTCAATGGGACAGCCGAAATTCATAGCACTTaGCAGCTGGTAGCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSFAICRTAVNIPLNGTAEIHST*QLVAFR Trigger: CCTGAAGGCTACCAGCTGTCAAGTGCTATGAATTTC...GGCTGTCCCATTGAGAGGAATGTTTACAGCAGTTCTACAAATAGCAAAGCTCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACCAACTGAAGTTATTTTaGTCACTACTGATACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QNSCKCGLFYTASWLCGYQLKLF*SLLILF Trigger: GAACAGTATCAGTAGTGAGCAAAATAACTTCAGTTG...GTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR TCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGCATCCCCAAGCTGCTTaGTCGTTGTGTATCTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWHPQAA*SLCIYS Trigger: TGAATAGATACACAACGATCAAGCAGCTTGGGGATG...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCAAAGCACAGCAGGGCATCCGAGGTTAGATTTGGTAAGTCTGTAAACTTGTTATTGGGTATGCACTaGGGCCAGAGGAAATTCATA | + |
|
Preference number: 4 (lower is better) Translates to: CPKHSRASEVRFGKSVNLLLGMH*GQRKFI Trigger: TATGAATTTCCTCTGGCCCCAGTGCATACCCAATAA...CAAGTTTACAGACTTACCAAATCTAACCTCGGATGCCCTGCTGTGCTTTGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| 3UTR CAA 72 bp | GCCCCTCAGCATCAAAAGGGCTCCATCGAGTGTACTTaGGATTCAGATTCTCCAAAGTATAAACTGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: APQHQKGSIECT*DSDSPKYKLLS Trigger: AGAAAGCAGTTTATACTTTGGAGAATCTGAATCCAAAGTACACTCGATGGAGCCCTTTTGATGCTGAGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR GCA 90 bp | ACGAGCTTTGCTATTTGTAGAACTGCTGTAAACATTCCTCTCAATGGGACAGCCTTAAGTTATTGGGTATaGACTGGGGCCAGAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TSFAICRTAVNIPLNGTALSYWV*TGARGN Trigger: ATTTCCTCTGGCCCCAGTGCATACCCAATAACTTAA...GGCTGTCCCATTGAGAGGAATGTTTACAGCAGTTCTACAAATAGCAAAGCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTATTGGGTATGCACTaGGGCCAGAGGAAATTCATA | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWLLGMH*GQRKFI Trigger: TATGAATTTCCTCTGGCCCCAGTGCATACCCAATAA...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR GCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGGTGTTTGTGAATGAATaGCAGTCCTTGCAATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWVFVNE*QSLQYL Trigger: CAGATATTGCAAGGACTGGCATTCATTCACAAACAC...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| 3UTR CAA 72 bp | CTACTTGCACAAGGCCTGGGTTTGATTTTTACAGAATaGCAAATCAACCAACCAACCAACCAACCAACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGLGLIFTE*QINQPTNQPTN Trigger: GTTAGTTGGTTGGTTGGTTGGTTGGTTGATTTGCAATTCTGTAAAAATCAAACCCAGGCCTTGTGCAAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
||
| 3UTR CAA 72 bp | TGCCAACAAACCAGGCCCAGAATGAGCCACTCTGACTaGCCAGAAAGCTGTTTTGATATTGCTTTTAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: CQQTRPRMSHSD*PESCFDIAFNN Trigger: ATTATTAAAAGCAATATCAAAACAGCTTTCTGGCAAGTCAGAGTGGCTCATTCTGGGCCTGGTTTGTTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR GCA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGCAACTGAAGTTATTTTaGTCACTACTGATACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVLVQNSCKCGLFYTASWQLKLF*SLLILF Trigger: GAACAGTATCAGTAGTGAGCAAAATAACTTCAGTTG...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| 3UTR CAA 72 bp | GACAGCCATGGCTACATAGAAAGATACTTGGCTTTTTaGGTCTTTCATCTTGGCAGGGATATAAGCTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: DSHGYIERYLAF*VFHLGRDISLI Trigger: AATTAAGCTTATATCCCTGCCAAGATGAAAGACCAAAAAAGCCAAGTATCTTTCTATGTAGCCATGGCTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS GCA 90 bp | CCACAATTGTTTTCCACATGGCGGCGATCGCGGCCCGGCGGCGCGTaGACCCGAGAGGGCCCGGCAGGCAAGGGCAGTGGGATCCGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PQLFSTWRRSRPGGA*TREGPAGKGSGIRA Trigger: CGCTCGGATCCCACTGCCCTTGCCTGCCGGGCCCTCTCGGGTGCACGCGCCGCCGGGCCGCGATCGCCGCCATGTGGAAAACAATTGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
||
| CDS GCA 90 bp | CGTGCACAGGCTGAGCAGCTGGAGGTCGGGGGATCAAGCCGGGCGTaGTCCTGGGCTGGGTGTGAAAGAAAGGCCTCCCCGGGTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RAQAEQLEVGGSSRA*SWAGCERKASPGEV Trigger: GACCTCACCCGGGGAGGCCTTTCTTTCACACCCAGCCCAGGAGCACGCCCGGCTTGATCCCCCGACCTCCAGCTGCTCAGCCTGTGCACG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS CCA 90 bp | CAGGCTGAGCAGCTGGAGGTCGGGGGATCAAGCCGGGCGTGCTCCTaGGCTGGGTGTGAAAGAAAGGCCTCCCCGGGTGAGGTCTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: QAEQLEVGGSSRACS*AGCERKASPGEVSR Trigger: CCGTGAGACCTCACCCGGGGAGGCCTTTCTTTCACACCCAGCCCAGGAGCACGCCCGGCTTGATCCCCCGACCTCCAGCTGCTCAGCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS TCA 90 bp | CGGGATGGGTACTTGGAAGACCAGTCTATCCTGCCGTGCACAGGCTaGGCAGCTGGAGGTCGGGGGATCAAGCCGGGCGTGCTCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RDGYLEDQSILPCTG*AAGGRGIKPGVLLG Trigger: GCCCAGGAGCACGCCCGGCTTGATCCCCCGACCTCCAGCTGCTCAGCCTGTGCACGGCAGGATAGACTGGTCTTCCAAGTACCCATCCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS CCA 90 bp | GTACTTGGAAGACCAGTCTATCCTGCCGTGCACAGGCTGAGCAGCTaGAGGTCGGGGGATCAAGCCGGGCGTGCTCCTGGGCTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLGRPVYPAVHRLSS*RSGDQAGRAPGLGV Trigger: CACACCCAGCCCAGGAGCACGCCCGGCTTGATCCCCCGACCTCCAGCTGCTCAGCCTGTGCACGGCAGGATAGACTGGTCTTCCAAGTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS CCA 90 bp | AGAAATCAGCGTATATGCCTTGGCCGGGGCCTGGGCAGGAGGGGCTaGCTTGATGTAAGGAGGAGGGCCTGTCTTGTCCTGGACCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RNQRICLGRGLGRRG*LDVRRRACLVLDLS Trigger: AGAGAGGTCCAGGACAAGACAGGCCCTCCTCCTTACATCAAGCCAGCCCCTCCTGCCCAGGCCCCGGCCAAGGCATATACGCTGATTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS CCA 90 bp | GGGTCGGCGTGTCTCTCCTCTGCGAGGAAGCCTGCGTGGAGACAGTaGTTCCTGTACCCACTGACTCAGATGGCTTCAGGTCCAGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: GSACLSSARKPAWRQ*FLYPLTQMASGPEH Trigger: GTGTTCTGGACCTGAAGCCATCTGAGTCAGTGGGTACAGGAACCACTGTCTCCACGCAGGCTTCCTCGCAGAGGAGAGACACGCCGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS TCA 90 bp | TATTCCAGGCAAGTAGCGAGAGTGCTTCAAGTAGTGCTGCTTTGCTaGGGACTGCAGGGTCGGCGTGTCTCTCCTCTGCGAGGAAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YSRQVARVLQVVLLC*GLQGRRVSPLRGSL Trigger: CAGGCTTCCTCGCAGAGGAGAGACACGCCGACCCTGCAGTCCTCAGCAAAGCAGCACTACTTGAAGCACTCTCGCTACTTGCCTGGAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS TCA 90 bp | AGGAGGAGGGCCTGTCTTGTCCTGGACCTCTCTCTGTGGTTTTCCTaGGTCCTTGCTGATGATGCCCAGTGGGTGTCCGATCTGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RRRACLVLDLSLWFS*VLADDAQWVSDLEV Trigger: TACTTCCAGATCGGACACCCACTGGGCATCATCAGCAAGGACTCAGGAAAACCACAGAGAGAGGTCCAGGACAAGACAGGCCCTCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS TCA 90 bp | CCTCTGCGAGGAAGCCTGCGTGGAGACAGTGGTTCCTGTACCCACTaGCTCAGATGGCTTCAGGTCCAGAACACTTTCAAACCTGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLRGSLRGDSGSCTH*LRWLQVQNTFKPAE Trigger: CTCTGCAGGTTTGAAAGTGTTCTGGACCTGAAGCCATCTGAGTCAGTGGGTACAGGAACCACTGTCTCCACGCAGGCTTCCTCGCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS CCA 90 bp | AGACATCGCCTTTGTAGGGGTGCACAGAATGCTGAGGGGGCTGACTaGCTTGGCTTGGTCGTGAAGAAATCAGCGTATATGCCTTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RHRLCRGAQNAEGAD*LGLVVKKSAYMPWP Trigger: CGGCCAAGGCATATACGCTGATTTCTTCACGACCAAGCCAAGCCAGTCAGCCCCCTCAGCATTCTGTGCACCCCTACAAAGGCGATGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CAA 90 bp | CAGACTAACACTGACTTTAGGAGCCAGGTGTCCAAAGCACAGCAGGGCATCCGAGGTTTTCCTGAGTCCTaGCTGATGATGCCCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QTNTDFRSQVSKAQQGIRGFPES*LMMPSG Trigger: CCCACTGGGCATCATCAGCAAGGACTCAGGAAAACC...TCGGATGCCCTGCTGTGCTTTGGACACCTGGCTCCTAAAGTCAGTGTTAGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CAA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGGGTTTTCCTGAGTCCTaGCTGATGATGCCCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VQNSCKCGLFYTASWLCGGFPES*LMMPSG Trigger: CCCACTGGGCATCATCAGCAAGGACTCAGGAAAACC...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTCTAGGAGACTTCCTCCAGCCCCACAACATCAGGAGAATTGGCCTCTGGGCCAGTCAGTCTTCTTaGGTGTTCCCAACACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLGDFLQPHNIRRIGLWASQSS*VFPTLG Trigger: GCCAAGTGTTGGGAACACCAAAGAAGACTGACTGGC...CCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGGAGGAAGTCTCCTAGAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGCCTCGTGACTCTTCCTTTTGCCTGTAAGGTAACCAGGAGAGGAGGTGGCAGTCCTTGCCTGGATTaGGGAGCACGCCATTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TGLVTLPFACKVTRRGGGSPCLD*GARHFL Trigger: TAAGAAATGGCGTGCTCCCAAATCCAGGCAAGGACT...GCCACCTCCTCTCCTGGTTACCTTACAGGCAAAAGGAAGAGTCACGAGGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGCATCTCAGCATATCCATGCCAACAAACCAGGCCCAGAATGAGCCACTCTGATGGAAGAAAGTCCTaGCCTGGATTTGGGAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LGISAYPCQQTRPRMSHSDGRKS*PGFGST Trigger: CGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCATC...AGAGTGGCTCATTCTGGGCCTGGTTTGTTGGCATGGATATGCTGAGATGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAACTGAAGAGATGCCTGCGTCTCAGACAGAAGGGCCCCATGCCATAGTTGATGGAAGAAAGTCCTaGCCTGGATTTGGGAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: RETEEMPASQTEGPHAIVDGRKS*PGFGST Trigger: CGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCATC...AACTATGGCATGGGGCCCTTCTGTCTGAGACGCAGGCATCTCTTCAGTTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CAA 90 bp | AGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAGCCAGTCAGTCTTCTTaGGTGTTCCCAACACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RTAVSVGCFTPPRGCAGTASQSS*VFPTLG Trigger: GCCAAGTGTTGGGAACACCAAAGAAGACTGACTGGC...TGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CAA 90 bp | TCGGATCCCTTGGAACTGGAATGGCTGAGTCATCTCTCCAGCCTGGGTATTTTTGGTTTTCCTGAGTCCTaGCTGATGATGCCCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SDPLELEWLSHLSSLGIFGFPES*LMMPSG Trigger: CCCACTGGGCATCATCAGCAAGGACTCAGGAAAACC...AAAAATACCCAGGCTGGAGAGATGACTCAGCCATTCCAGTTCCAAGGGATCCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CAA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGAGTCCTTGCCTGGATTaGGGAGCACGCCATTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: VQNSCKCGLFYTASWLCGSPCLD*GARHFL Trigger: TAAGAAATGGCGTGCTCCCAAATCCAGGCAAGGACT...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CAA 90 bp | AGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACAGATGGAAGAAAGTCCTaGCCTGGATTTGGGAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: RTAVSVGCFTPPRGCAGTDGRKS*PGFGST Trigger: CGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCATC...TGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAACTGAAGAGATGCCTGCGTCTCAGACAGAAGGGCCCCATGCCATAGTTCCATCCCCAAGCTGCTaGATCGTTGTGTATCTATTC | + |
|
Preference number: 5 (lower is better) Translates to: RETEEMPASQTEGPHAIVPSPSC*IVVYLF Trigger: GAATAGATACACAACGATCAAGCAGCTTGGGGATGG...AACTATGGCATGGGGCCCTTCTGTCTGAGACGCAGGCATCTCTTCAGTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CAA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGCCATCCCCAAGCTGCTaGATCGTTGTGTATCTATTC | + |
|
Preference number: 5 (lower is better) Translates to: VQNSCKCGLFYTASWLCGPSPSC*IVVYLF Trigger: GAATAGATACACAACGATCAAGCAGCTTGGGGATGG...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCCTGTAAGGTAACCAGGAGAGGAGGTGGCTGCGTCACACAGAGATGGAAGAGAGTCTTTAAGTTATaGGGTATGCACTGGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FACKVTRRGGGCVTQRWKRVFKL*GMHWGQ Trigger: CTGGCCCCAGTGCATACCCAATAACTTAAAGACTCT...CTTCCATCTCTGTGTGACGCAGCCACCTCCTCTCCTGGTTACCTTACAGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTTTTGGCTTCCTCCTGGGTCAGGGAGGACTGCTCCACTCCCAACCTCCCCTTGCCTGAAGTTATTTaGCTCACTACTGATACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: WFLASSWVREDCSTPNLPLPEVI*LTTDTV Trigger: AACAGTATCAGTAGTGAGCAAAATAACTTCAGGCAA...GGGGAGGTTGGGAGTGGAGCAGTCCTCCCTGACCCAGGAGGAAGCCAAAAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCACAACATCAGGAGAATTGGCCTCTGGTCACTCAGGAGTTAATAACTAGTCCTTGCCTGGATTaGGGAGCACGCCATTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PAPQHQENWPLVTQELITSPCLD*GARHFL Trigger: TAAGAAATGGCGTGCTCCCAAATCCAGGCAAGGACT...AGTTATTAACTCCTGAGTGACCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGACTTCCTCCAGCCCCACAACATCAGGAGAATTGGCCTCTGGTCACTCAGAACTGGACCATGAATTaGATGGAAGAAAGTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRLPPAPQHQENWPLVTQNWTMN*MEESPC Trigger: GCAAGGACTTTCTTCCATCAAATTCATGGTCCAGTT...CTGAGTGACCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGGAGGAAGTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTAACTTCAGAAGGGAAGCTGTTTGCTAGTCAAGGAAGGGAAGCCAAGTTAGCCAGTCAGTCTTCTTaGGTGTTCCCAACACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WLTSEGKLFASQGREAKLASQSS*VFPTLG Trigger: GCCAAGTGTTGGGAACACCAAAGAAGACTGACTGGC...TAACTTGGCTTCCCTTCCTTGACTAGCAAACAGCTTCCCTTCTGAAGTTAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCACAACATCAGGAGAATTGGCCTCTGGTCACTCAGGAGTTAATAACTAGAGTCTTTAAGTTATaGGGTATGCACTGGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAPQHQENWPLVTQELITRVFKL*GMHWGQ Trigger: CTGGCCCCAGTGCATACCCAATAACTTAAAGACTCT...AGTTATTAACTCCTGAGTGACCAGAGGCCAATTCTCCTGATGTTGTGGGGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
||
| CDS-3UTR CAA 90 bp | GTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGGGCTGGCTAGGATTTTaGGCTGAAGATTCTTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: VQNSCKCGLFYTASWLCGGWLGF*AEDSYC Trigger: ACAATAAGAATCTTCAGCCAAAAATCCTAGCCAGCC...CCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
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| CDS GCA 90 bp | CAGACAAGCCGGAACTGGACCATGAATTTGATGGAAGAAAGTCCTTaGCTGGATTTGGGAGCACGCCATTTCTTATATTTATTCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTSRNWTMNLMEESP*LDLGARHFLYLFQA Trigger: TGCCTGGAATAAATATAAGAAATGGCGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCATCAAATTCATGGTCCAGTTCCGGCTTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS-3UTR CAA 90 bp | CGTACGTCTGCGGTTCTTGCTAGTTCTTTAGAATTTGGTTTTCCAGTAAGCTGGCCATCCCCAAGCTGCTaGATCGTTGTGTATCTATTC | + |
|
Preference number: 5 (lower is better) Translates to: RTSAVLASSLEFGFPVSWPSPSC*IVVYLF Trigger: GAATAGATACACAACGATCAAGCAGCTTGGGGATGG...CCAGCTTACTGGAAAACCAAATTCTAAAGAACTAGCAAGAACCGCAGACGTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CAA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGAGAGTCTTTAAGTTATaGGGTATGCACTGGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NVLVQNSCKCGLFYTASWRVFKL*GMHWGQ Trigger: CTGGCCCCAGTGCATACCCAATAACTTAAAGACTCT...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
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| CDS-3UTR CAA 90 bp | AGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGTTGTGCGGGTACACCAACTGAAGTTATTTaGCTCACTACTGATACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RTAVSVGCFTPPRGCAGTPTEVI*LTTDTV Trigger: AACAGTATCAGTAGTGAGCAAAATAACTTCAGTTGG...TGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
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| CDS CCA 90 bp | TCACTACTGATACTGTTCCTGAAGATTTTCCAGACAAGCCGGAACTaGACCATGAATTTGATGGAAGAAAGTCCTTGCCTGGATTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLLILFLKIFQTSRN*TMNLMEESPCLDLG Trigger: TCCCAAATCCAGGCAAGGACTTTCTTCCATCAAATTCATGGTCCAGTTCCGGCTTGTCTGGAAAATCTTCAGGAACAGTATCAGTAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCAAAGCACAGCAGGGCATCCGAGGTTAGATTTGGTAAGTCTGTAAACTTGGGCTGGCTAGGATTTTaGGCTGAAGATTCTTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: CPKHSRASEVRFGKSVNLGWLGF*AEDSYC Trigger: ACAATAAGAATCTTCAGCCAAAAATCCTAGCCAGCC...CAAGTTTACAGACTTACCAAATCTAACCTCGGATGCCCTGCTGTGCTTTGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117330.8 |
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| CDS-3UTR CAA 90 bp | TGGCTAACTTCAGAAGGGAAGCTGTTTGCTAGTCAAGGAAGGGAAGCCAAGTTAAACTGGACCATGAATTaGATGGAAGAAAGTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WLTSEGKLFASQGREAKLNWTMN*MEESPC Trigger: GCAAGGACTTTCTTCCATCAAATTCATGGTCCAGTT...TAACTTGGCTTCCCTTCCTTGACTAGCAAACAGCTTCCCTTCTGAAGTTAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGCTCACCAGAGCAACAGGTGACTACAACTCTGCCATCTCTCTGTCTGCCCCAACTGAAGTTATTTaGCTCACTACTGATACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KKLTRATGDYNSAISLSAPTEVI*LTTDTV Trigger: AACAGTATCAGTAGTGAGCAAAATAACTTCAGTTGG...GGCAGACAGAGAGATGGCAGAGTTGTAGTCACCTGTTGCTCTGGTGAGCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CAA 90 bp | AATGTATTAGTTCAGAACAGCTGTAAGTGTGGGTTGTTTTACACCGCCTCGTGGAACTGGACCATGAATTaGATGGAAGAAAGTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NVLVQNSCKCGLFYTASWNWTMN*MEESPC Trigger: GCAAGGACTTTCTTCCATCAAATTCATGGTCCAGTT...CCACGAGGCGGTGTAAAACAACCCACACTTACAGCTGTTCTGAACTAATACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS-3UTR CAA 90 bp | ACGAGCTTTGCTATTTGTAGAACTGCTGTAAACATTCCTCTCAATGGGACAGCCTGGTGTTCCCAACACTaGGCAAATTTTGAAAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSFAICRTAVNIPLNGTAWCSQH*ANFENC Trigger: ACAATTTTCAAAATTTGCCAAGTGTTGGGAACACCA...GGCTGTCCCATTGAGAGGAATGTTTACAGCAGTTCTACAAATAGCAAAGCTCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044551.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGTACATTAGTGGAGCCTTATTTAGAAACATAATATTCAGAGCAAGTGGATTTTCTTCTCCACAATaGTTTTCCACATGGCGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RQYISGALFRNIIFRASGFSSPQ*FSTWRR Trigger: TCGCCGCCATGTGGAAAACAATTGTGGAGAAGAAAA...TCCACTTGCTCTGAATATTATGTTTCTAAATAAGGCTCCACTAATGTACTGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
||
| CDS GCA 72 bp | TTTTCCACATGGCGGCGATCGCGGCCCGGCGGCGCGTaGACCCGAGAGGGCCCGGCAGGCAAGGGCAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FSTWRRSRPGGA*TREGPAGKGSG Trigger: CCCACTGCCCTTGCCTGCCGGGCCCTCTCGGGTGCACGCGCCGCCGGGCCGCGATCGCCGCCATGTGGAAAA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009972.6 |
||
| CDS GCA 72 bp | GCTGAGCAGCTGGAGGTCGGGGGATCAAGCCGGGCGTaGTCCTGGGCTGGGTGTGAAAGAAAGGCCTCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AEQLEVGGSSRA*SWAGCERKASP Trigger: CGGGGAGGCCTTTCTTTCACACCCAGCCCAGGAGCACGCCCGGCTTGATCCCCCGACCTCCAGCTGCTCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS CCA 72 bp | CAGCTGGAGGTCGGGGGATCAAGCCGGGCGTGCTCCTaGGCTGGGTGTGAAAGAAAGGCCTCCCCGGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QLEVGGSSRACS*AGCERKASPGE Trigger: CTCACCCGGGGAGGCCTTTCTTTCACACCCAGCCCAGGAGCACGCCCGGCTTGATCCCCCGACCTCCAGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS GCA 72 bp | ACCGCCGGGATGGGTACTTGGAAGACCAGTCTATCCTaGCGTGCACAGGCTGAGCAGCTGGAGGTCGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TAGMGTWKTSLS*RAQAEQLEVGG Trigger: TCCCCCGACCTCCAGCTGCTCAGCCTGTGCACGGCAGGATAGACTGGTCTTCCAAGTACCCATCCCGGCGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044551.8 ENSMUST00000118869.8 |
||
| CDS CCA 72 bp | CGTATATGCCTTGGCCGGGGCCTGGGCAGGAGGGGCTaGCTTGATGTAAGGAGGAGGGCCTGTCTTGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RICLGRGLGRRG*LDVRRRACLVL Trigger: CAGGACAAGACAGGCCCTCCTCCTTACATCAAGCCAGCCCCTCCTGCCCAGGCCCCGGCCAAGGCATATACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS CCA 72 bp | GGGTCGGCGTGTCTCTCCTCTGCGAGGAAGCCTGCGTaGAGACAGTGGTTCCTGTACCCACTGACTCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: GSACLSSARKPA*RQWFLYPLTQM Trigger: CATCTGAGTCAGTGGGTACAGGAACCACTGTCTCCACGCAGGCTTCCTCGCAGAGGAGAGACACGCCGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS GCA 72 bp | TTTGCTGAGGACTGCAGGGTCGGCGTGTCTCTCCTCTaGGAGGAAGCCTGCGTGGAGACAGTGGTTCCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: FAEDCRVGVSLL*EEACVETVVPV Trigger: TACAGGAACCACTGTCTCCACGCAGGCTTCCTCGCAGAGGAGAGACACGCCGACCCTGCAGTCCTCAGCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS CCA 72 bp | AGCCTACCGCCCAGATGTCAATGGGGGAGCTGTAGTTaGTGGATCTCAGCAGTACCTCTGGAGCCCTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: SLPPRCQWGSCS*WISAVPLEPCT Trigger: GGTACAGGGCTCCAGAGGTACTGCTGAGATCCACCAACTACAGCTCCCCCATTGACATCTGGGCGGTAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS TCA 72 bp | CAAGTAGCGAGAGTGCTTCAAGTAGTGCTGCTTTGCTaGGGACTGCAGGGTCGGCGTGTCTCTCCTCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: QVARVLQVVLLC*GLQGRRVSPLR Trigger: TCGCAGAGGAGAGACACGCCGACCCTGCAGTCCTCAGCAAAGCAGCACTACTTGAAGCACTCTCGCTACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS CCA 72 bp | CTACCGCCCAGATGTCAATGGGGGAGCTGTAGTTGGTaGATCTCAGCAGTACCTCTGGAGCCCTGTACCATC | + |
|
Preference number: 6 (lower is better) Translates to: LPPRCQWGSCSW*ISAVPLEPCTI Trigger: GATGGTACAGGGCTCCAGAGGTACTGCTGAGATCCACCAACTACAGCTCCCCCATTGACATCTGGGCGGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
||
| CDS CAA 72 bp | GGTGCACAGAATGCTGAGGGGGCTGACTGGCTTGGCTaGGTCGTGAAGAAATCAGCGTATATGCCTTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: GAQNAEGADWLG*VVKKSAYMPWP Trigger: CGGCCAAGGCATATACGCTGATTTCTTCACGACCAAGCCAAGCCAGTCAGCCCCCTCAGCATTCTGTGCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS CAA 72 bp | CAGGCAAGTAGCGAGAGTGCTTCAAGTAGTGCTGCTTaGCTGAGGACTGCAGGGTCGGCGTGTCTCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QASSESASSSAA*LRTAGSACLSS Trigger: AGAGGAGAGACACGCCGACCCTGCAGTCCTCAGCAAAGCAGCACTACTTGAAGCACTCTCGCTACTTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS CAA 90 bp | TATTTATTCCAGGCAAGTAGCGAGAGTGCTTCAAGTAGTGCTGCTTaGCTGAGGACTGCAGGGTCGGCGTGTCTCTCCTCTGCGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: YLFQASSESASSSAA*LRTAGSACLSSARK Trigger: CTTCCTCGCAGAGGAGAGACACGCCGACCCTGCAGTCCTCAGCAAAGCAGCACTACTTGAAGCACTCTCGCTACTTGCCTGGAATAAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS TCA 72 bp | GGGTATGCACTGGGGCCAGAGGAAATTCATAGCACTTaGCAGCTGGTAGCCTTCAGGCCAGTCAGTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GYALGPEEIHST*QLVAFRPVSLL Trigger: AAGAAGACTGACTGGCCTGAAGGCTACCAGCTGTCAAGTGCTATGAATTTCCTCTGGCCCCAGTGCATACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS CCA 72 bp | CTTTGTAGGGGTGCACAGAATGCTGAGGGGGCTGACTaGCTTGGCTTGGTCGTGAAGAAATCAGCGTATATG | + |
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Preference number: 6 (lower is better) Translates to: LCRGAQNAEGAD*LGLVVKKSAYM Trigger: CATATACGCTGATTTCTTCACGACCAAGCCAAGCCAGTCAGCCCCCTCAGCATTCTGTGCACCCCTACAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS TCA 72 bp | CCATCTAGTAGACACATAGTCTGTGTACGGAGGTCTTaGTCGGATTTCTCGAGCCAATCCAAAGTCGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: PSSRHIVCVRRS*SDFSSQSKVGD Trigger: ATCGCCGACTTTGGATTGGCTCGAGAAATCCGATCAAGACCTCCGTACACAGACTATGTGTCTACTAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS CAA 90 bp | CCAGACAAGCCGGAACTGGACCATGAATTTGATGGAAGAAAGTCCTaGCCTGGATTTGGGAGCACGCCATTTCTTATATTTATTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PDKPELDHEFDGRKS*PGFGSTPFLIFIPG Trigger: GCCTGGAATAAATATAAGAAATGGCGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCATCAAATTCATGGTCCAGTTCCGGCTTGTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS CAA 90 bp | CGGAACTGGACCATGAATTTGATGGAAGAAAGTCCTTGCCTGGATTaGGGAGCACGCCATTTCTTATATTTATTCCAGGCAAGTAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: RNWTMNLMEESPCLD*GARHFLYLFQASSE Trigger: CTCGCTACTTGCCTGGAATAAATATAAGAAATGGCGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCATCAAATTCATGGTCCAGTTCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS CCA 72 bp | ATACTGTTCCTGAAGATTTTCCAGACAAGCCGGAACTaGACCATGAATTTGATGGAAGAAAGTCCTTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ILFLKIFQTSRN*TMNLMEESPCL Trigger: CAGGCAAGGACTTTCTTCCATCAAATTCATGGTCCAGTTCCGGCTTGTCTGGAAAATCTTCAGGAACAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS CAA 72 bp | TCGCTGCTAGCATTTGGGATTAGAGTCTTTAAGTTATaGGGTATGCACTGGGGCCAGAGGAAATTCATAGCA | + |
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Preference number: 6 (lower is better) Translates to: SLLAFGIRVFKL*GMHWGQRKFIA Trigger: TGCTATGAATTTCCTCTGGCCCCAGTGCATACCCAATAACTTAAAGACTCTAATCCCAAATGCTAGCAGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS CAA 72 bp | ACCATGAATTTGATGGAAGAAAGTCCTTGCCTGGATTaGGGAGCACGCCATTTCTTATATTTATTCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TMNLMEESPCLD*GARHFLYLFQA Trigger: TGCCTGGAATAAATATAAGAAATGGCGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCATCAAATTCATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS CAA 72 bp | GTGGAAGAAACCGTGTTTGTGAATGAATGCCAGTCCTaGCAATATCTGGTACATTATATTCCTTATAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: VEETVFVNECQS*QYLVHYIPYSR Trigger: TCTGCTATAAGGAATATAATGTACCAGATATTGCAAGGACTGGCATTCATTCACAAACACGGTTTCTTCCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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| CDS TCA 72 bp | TCCCTGATAACCTCTTTTAACTTTACGATATTGGCATaGTTAAGCTTCTTTAAAGACTTAACCTCCCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SLITSFNFTILA*LSFFKDLTSRR Trigger: CCTTCGGGAGGTTAAGTCTTTAAAGAAGCTTAATCATGCCAATATCGTAAAGTTAAAAGAGGTTATCAGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044551.8 ENSMUST00000117330.8 ENSMUST00000118869.8 |
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