RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CIC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000005442

Ensembl transcript IDs: ENSMUST00000005578.13, ENSMUST00000163320.8, ENSMUST00000163901.2, ENSMUST00000164820.2, ENSMUST00000165239.3, ENSMUST00000169266.8, ENSMUST00000169392.2

Found 679 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTaGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCC +
Preference number: 1 (lower is better)
Translates to: NRPHSAPNWKGQMAS*GGGNYPTVWPPIPA
Trigger: GGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR GCA 90 bp CTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTaGCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCA +
Preference number: 1 (lower is better)
Translates to: LQVIYKSSVEGICPC*PQHREGIYIQGNRP
Trigger: TGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR GCA 90 bp GGTCACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTaGCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGG +
Preference number: 1 (lower is better)
Translates to: GHTLQVIYKSSVEGI*PCCPQHREGIYIQG
Trigger: CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR GCA 90 bp ACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTaGTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGG +
Preference number: 1 (lower is better)
Translates to: TLQVIYKSSVEGICP*CPQHREGIYIQGNR
Trigger: CCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR-3UTR GCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATGGTATCTGCCCCTGCTaGCCCCAGCACAGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: PKAHTTLQLAALTGAILHGICPC*PQHREG
Trigger: TCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACC...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR-3UTR CCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCAACTATCCCACTGTCTaGCCCCCAATTCCTGCCATC +
Preference number: 2 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGNYPTV*PPIPAI
Trigger: GATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTT...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR-3UTR CCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATTCTACAAGAGCTCAGTaGAGGGTATCTGCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: PKAHTTLQLAALTGAILHSTRAQ*RVSAPA
Trigger: AGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGA...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR-3UTR GCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGGGTATCTGCCCCTGCTaGCCCCAGCACAGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWGICPC*PQHREG
Trigger: TCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACC...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR-3UTR CCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAACTATCCCACTGTCTaGCCCCCAATTCCTGCCATC +
Preference number: 2 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTNYPTV*PPIPAI
Trigger: GATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTT...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR-3UTR CCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACACATTCCGCGCCGAACTaGAAAGGACAAATGGCTTCC +
Preference number: 2 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTHSAPN*KGQMAS
Trigger: GGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATG...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR-3UTR CCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAATGGGAGGGCAGAGGGTaGGGAGAATCCTCCCCATGC +
Preference number: 2 (lower is better)
Translates to: LGMGTMVGGITFLESTTQWEGRG*GESSPC
Trigger: GCATGGGGAGGATTCTCCCCACCCTCTGCCCTCCCA...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR-3UTR CCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGGGACAAATGGCTTCCTaGGGAGGCGGTAACTATCCC +
Preference number: 2 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWGQMAS*GGGNYP
Trigger: GGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCC...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR-3UTR TCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAATGCATAAAGTACAAGTaGAAAGCTCTGAAGGTCACA +
Preference number: 2 (lower is better)
Translates to: LGMGTMVGGITFLESTTQCIKYK*KALKVT
Trigger: TGTGACCTTCAGAGCTTTTCACTTGTACTTTATGCA...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR CCA 72 bp CATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTaGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCA +
Preference number: 3 (lower is better)
Translates to: HSAPNWKGQMAS*GGGNYPTVWPP
Trigger: TGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR CCA 72 bp AAGGTCACACACTTCAGGTTATCTACAAGAGCTCAGTaGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGG +
Preference number: 3 (lower is better)
Translates to: KVTHFRLSTRAQ*RVSAPAAPSTG
Trigger: CCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTGACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR GCA 72 bp ATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTaGCCCCAGCACAGGGAGGGAATATATATACAAGGG +
Preference number: 3 (lower is better)
Translates to: IYKSSVEGICPC*PQHREGIYIQG
Trigger: CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR CCA 72 bp TATATACAAGGGAACAGGCCACATTCCGCGCCGAACTaGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAAC +
Preference number: 3 (lower is better)
Translates to: YIQGNRPHSAPN*KGQMASWGGGN
Trigger: GTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCTTGTATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR-3UTR CAA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGATACTACCCTCCAGCTaGCAGCCCTCACAGGAGCCA +
Preference number: 3 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWILPSS*QPSQEP
Trigger: TGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTAT...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
3UTR GCA 72 bp GTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTaGTGCCCCCAGCACAGGGAGGGAATATATATACAA +
Preference number: 3 (lower is better)
Translates to: VIYKSSVEGICP*CPQHREGIYIQ
Trigger: TTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTGGCTCTGGGTCGGGCTaGGCCAGGTGCCCCAACTGC +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGGSGSG*ARCPNC
Trigger: GCAGTTGGGGCACCTGGCTCAGCCCGACCCAGAGCC...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATAACCAGGGCCCGCCGTTaGTCCAGGGTGCGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNITRARR*SRVRRS
Trigger: ACTGCGGCGCACCCTGGACCAACGGCGGGCCCTGGT...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATCAGCCCCAGGGGGCTaGTCTGTGGGAGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNISAPGG*SVGVAA
Trigger: GGCAGCCACTCCCACAGAGCAGCCCCCTGGGGCTGA...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGAGGCCAGGTCTCTGTaGGGGGTGGGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGEARSL*GVGELG
Trigger: CCCCAGCTCCCCCACCCCCCACAGAGACCTGGCCTC...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGACCAGGGCCCGCCGTTaGTCCAGGGTGCGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGTRARR*SRVRRS
Trigger: ACTGCGGCGCACCCTGGACCAACGGCGGGCCCTGGT...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAACCAGGGGCAGTGGCTaGCCAGCCCCTCCACCTCGA +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGTRGSG*PAPPPR
Trigger: TCGAGGTGGAGGGGCTGGTCAGCCACTGCCCCTGGT...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGACCAGGGGCAGTGGCTaGCCAGCCCCTCCACCTCGA +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGTRGSG*PAPPPR
Trigger: TCGAGGTGGAGGGGCTGGTCAGCCACTGCCCCTGGT...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATGGGCCTCACTAGGCTaGACAGAGGGGTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIWASLG*TEGSGW
Trigger: CCAGCCCGACCCCTCTGTGCAGCCTAGTGAGGCCCA...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTGGGTGGCTGGCAGGTTaGTGGGCCTCACTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGGWLAG*WASLGC
Trigger: GCAGCCTAGTGAGGCCCAGCAACCTGCCAGCCACCC...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTCGCTGCTGCCACTGCTaGTTCCACTGGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGRCCHC*FHWGLW
Trigger: CCACAGGCCCCAGTGGAAGCAGCAGTGGCAGCAGCG...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGTGTGCCTGGTGGGCCTaGATGGGAGCTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGCAWWA*MGAGAR
Trigger: CCTGGCCCCAGCTCCCATGCAGGCCCACCAGGCACA...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGATGGCAGGGCGAAGGCTaGTCACTAGGGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGWQGEG*SLGRPG
Trigger: CCCTGGCCGCCCTAGTGAGCAGCCTTCGCCCTGCCA...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGCTTCCTTCCCGGGCTaGCACACCCGCAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTASFPG*HTRRPP
Trigger: GGGCGGCCTGCGGGTGTGGCAGCCCGGGAAGGAAGC...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTTGGATCCGGGGGCCCTaGAGGCTCAGGGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSWIRGP*RLRVQG
Trigger: ACCCTGGACCCTGAGCCTCCAGGGCCCCCGGATCCA...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGGCTGAAGGCTGCAGGTaGATCCGGGGGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGAEGCR*IRGPWR
Trigger: CCTCCAGGGCCCCCGGATCCACCTGCAGCCTTCAGC...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTCTGCGGCTGCCACCCTaGCTCCCTTCCTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTLRLPP*LPSWQG
Trigger: GCCCTGCCAGGAAGGGAGCCAGGGTGGCAGCCGCAG...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTGTGCTGGCGCTCAGGTaGCGGCTGCGAACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGVLALR*RLRTAV
Trigger: CACTGCTGTTCGCAGCCGCCACCTGAGCGCCAGCAC...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTGTGGGGGCCCAGGTCTaGTGGTGTCAGCACGCCTGC +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSVGAQV*WCQHAC
Trigger: GCAGGCGTGCTGACACCACCAGACCTGGGCCCCCAC...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGGCTCTGGGTCGGGCTaGGCCAGGTGCCCCAACTGC +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTGSGSG*ARCPNC
Trigger: GCAGTTGGGGCACCTGGCTCAGCCCGACCCAGAGCC...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGATGTCTTGCGACTGAGTaGGGGCTCCCAGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGCLATE*GLPAAC
Trigger: GCAGGCCGCTGGGAGCCCTCACTCAGTCGCAAGACA...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGCGGACAATGACAGGTaGGTCCCGCTGCACGGCGGG +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTADNDR*VPLHGG
Trigger: CCCGCCGTGCAGCGGGACTCACCTGTCATTGTCCGC...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGGGGTGGCTGGCAGGTTaGTGGGCCTCACTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGGWLAG*WASLGC
Trigger: GCAGCCTAGTGAGGCCCAGCAACCTGCCAGCCACCC...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCCTCCTTGTGCCCTCCTaGCAGACCCAGGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGLLVPS*QTQARR
Trigger: CCTGCGAGCCTGGGTCTGGCAGGAGGGCACAAGGAG...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTTCCCGCGTCTCCTTGTaGCCTCCTGCCAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSSRVSL*PPARPR
Trigger: CCTGGGTCTGGCAGGAGGGCACAAGGAGACGCGGGA...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTGCCTTTGCTGAAGGCTaGAGGTGGATCCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSAFAEG*RWIRGP
Trigger: GGGCCCCCGGATCCACCTGCAGCCTTCAGCAAAGGC...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATACCCACTGGGAGGTGCTaGAATGACAGAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIPTGRC*NDRGAW
Trigger: CCAGGCCCCTCTGTCATTGCAGCACCTCCCAGTGGG...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTTCCCCCACTGGGAGGTaGTGCAATGACAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGSPTGR*CNDRGA
Trigger: GGCCCCTCTGTCATTGCAGCACCTCCCAGTGGGGGA...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATACACCTGGCTGCAGGATaGCCAGGGGTACTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIHLAAG*PGVLAH
Trigger: ATGGGCCAGTACCCCTGGGCATCCTGCAGCCAGGTG...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGATGGCAGCCAGGACCTTaGCGTTGGTCGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGWQPGP*RWSRCP
Trigger: CGGGCACCTCGACCAACGGCAAGGTCCTGGCTGCCA...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGGGGTGTGTCCCCAGCTaGCCTCCCACTACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGGCVPS*PPTTAL
Trigger: GAGGGCAGTAGTGGGAGGGCAGCTGGGGACACACCC...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGTCAGCCCCAGGGGGCTaGTCTGTGGGAGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGSAPGG*SVGVAA
Trigger: GGCAGCCACTCCCACAGAGCAGCCCCCTGGGGCTGA...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTCACCTGGCGCACGACTaGAGGCAGGAAGAGGCCATC +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGHLAHD*RQEEAI
Trigger: GATGGCCTCTTCCTGCCTGCAGTCGTGCGCCAGGTG...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGCCCAGGGATGGTGGGTaGTTCTCCTCCCCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGPRDGG*FSSPSS
Trigger: CGAGGAGGGGGAGGAGAAGCACCCACCATCCCTGGG...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGAGCAGGACAGGGGTaGCCAGGGATGGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGGAGQG*PGMVGA
Trigger: AGCACCCACCATCCCTGGGCACCCCTGTCCTGCTCC...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGTTGGGGTGCCGCTGGTaGACCAAGGCCCGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: CPQHREGIYIQGNRPHSALGCRW*TKARCR
Trigger: GCGGCACCGGGCCTTGGTCCACCAGCGGCACCCCAA...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATATTGGGGTGCCGCTGGTaGACCAAGGCCCGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCILGCRW*TKARCR
Trigger: GCGGCACCGGGCCTTGGTCCACCAGCGGCACCCCAA...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTTGGATCCGGGGGCCCTaGAGGCTCAGGGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTWIRGP*RLRVQG
Trigger: ACCCTGGACCCTGAGCCTCCAGGGCCCCCGGATCCA...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGCCCTGGCTCCCTTCCTaGCAGGGCGAAGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGPWLPS*QGEGCS
Trigger: TGAGCAGCCTTCGCCCTGCCAGGAAGGGAGCCAGGG...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACACCGCCCAGTCCCACCTaGCCCACTGTCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTPPSPT*PTVCQA
Trigger: GGCCTGGCAGACAGTGGGCCAGGTGGGACTGGGCGG...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCGGCCAGGTTTCCCGCTaGCCACCCCAGGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGGQVSR*PPQGAL
Trigger: CAGTGCCCCCTGGGGTGGCCAGCGGGAAACCTGGCC...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGCCGTACCACATTGGTaGCCATGGTGGCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGAVPHW*PWWQQG
Trigger: GCCCTGCTGCCACCATGGTCACCAATGTGGTACGGC...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTCCCAGTACTTGCTCCTaGGCCTGCAGGGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGPSTCS*ACRGCT
Trigger: AGTGCAACCCCTGCAGGCTCAGGAGCAAGTACTGGG...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATAGGGACTAGGCACAGGTaGCACGCCCACCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIGTRHR*HAHLAR
Trigger: CCTGGCCAGGTGGGCGTGTCACCTGTGCCTAGTCCC...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCGGGACTAGGCACAGGTaGCACGCCCACCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGGTRHR*HAHLAR
Trigger: CCTGGCCAGGTGGGCGTGTCACCTGTGCCTAGTCCC...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCGAGCCAGCACCCGCTaGGACCTCAGTTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGRASTR*DLSCRR
Trigger: CCTGCGGCAACTGAGGTCTCAGCGGGTGCTGGCTCG...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACGAAGGGCACAGCCGGTaGCACAGCTCGGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYEGHSR*HSSEAS
Trigger: GCTGGCTTCCGAGCTGTGTCACCGGCTGTGCCCTTC...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGCCTTTGCTGAAGGCTaGAGGTGGATCCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTAFAEG*RWIRGP
Trigger: GGGCCCCCGGATCCACCTGCAGCCTTCAGCAAAGGC...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCCACCTGGCTGCAGGATaGCCAGGGGTACTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGHLAAG*PGVLAH
Trigger: ATGGGCCAGTACCCCTGGGCATCCTGCAGCCAGGTG...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGACCTAGGGCACCTGGCTaGAGGATGCCCAGGGGTACT +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGPRAPG*RMPRGT
Trigger: AGTACCCCTGGGCATCCTGCAGCCAGGTGCCCTAGG...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTCACTACTGCCCTCGCTaGTGCCACTGCTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGHYCPR*CHCCFH
Trigger: GTGGAAGCAGCAGTGGCAGCAGCGAGGGCAGTAGTG...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATGGGTGTGTCCCCAGCTaGCCTCCCACTACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHGCVPS*PPTTAL
Trigger: GAGGGCAGTAGTGGGAGGGCAGCTGGGGACACACCC...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGGCCGTTGGTCCAGGGTaGGCCGCAGTGATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGAVGPG*AAVMSR
Trigger: CCTACTCATCACTGCGGCGCACCCTGGACCAACGGC...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGCCGTTGGTCCAGGGTaGGCCGCAGTGATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGAVGPG*AAVMSR
Trigger: CCTACTCATCACTGCGGCGCACCCTGGACCAACGGC...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCACAGAGGGGTCGGGCTaGCTGGGTGCCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGTEGSG*LGARKG
Trigger: CCCCTTCCTGGCACCCAGCCAGCCCGACCCCTCTGT...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATAACAGAGGGGTCGGGCTaGCTGGGTGCCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCITEGSG*LGARKG
Trigger: CCCCTTCCTGGCACCCAGCCAGCCCGACCCCTCTGT...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCGCTGAAGGCTGCAGGTaGATCCGGGGGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPAEGCR*IRGPWR
Trigger: CCTCCAGGGCCCCCGGATCCACCTGCAGCCTTCAGC...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATAGGGGTACTGGCCCATTaGGGCCACTCCCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIGVLAH*GHSQYL
Trigger: CAAGTACTGGGAGTGGCCCCAATGGGCCAGTACCCC...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGATGCCCAGGGGTACTaGCCCATTGGGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGDAQGY*PIGATP
Trigger: GGGAGTGGCCCCAATGGGCCAGTACCCCTGGGCATC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACGATGCCCAGGGGTACTaGCCCATTGGGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYDAQGY*PIGATP
Trigger: GGGAGTGGCCCCAATGGGCCAGTACCCCTGGGCATC...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGCAGCAGTGGGTGCAGTaGCAGCCAGGACCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGQQWVQ*QPGPCR
Trigger: ACGGCAAGGTCCTGGCTGCCACTGCACCCACTGCTG...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCAGTGGCAGAGGCTaGTGGGCCCTTGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGGSGRG*WALGQN
Trigger: ATTCTGCCCAAGGGCCCACCAGCCTCTGCCACTGCC...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATAAGGACTAGTAGGGGCTaGAGTGGCAGTGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIRTSRG*SGSGRG
Trigger: GCCTCTGCCACTGCCACTCCAGCCCCTACTAGTCCT...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCGAGGCCAGGTCTCTGTaGGGGGTGGGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCEARSL*GVGELG
Trigger: CCCCAGCTCCCCCACCCCCCACAGAGACCTGGCCTC...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTTTCCACTGGGGCCTGTaGCTGGAGCTGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTFHWGL*LELGWE
Trigger: CTCCCAGCCCAGCTCCAGCCACAGGCCCCAGTGGAA...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGGACCGAGTGGAGGTaGGTGGCCGAGGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYRTEWR*VAEEAH
Trigger: GTGTGCCTCCTCGGCCACCCACCTCCACTCGGTCCT...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGCAGTACCCGCGCCGCTaGGACTCCTTCATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGQYPRR*DSFMQP
Trigger: TGGCTGCATGAAGGAGTCCCAGCGGCGCGGGTACTG...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATAAGGTGGGCATCGGCTaGGCCACAGCAGTCGGTGCG +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHKVGIG*ATAVGA
Trigger: CGCACCGACTGCTGTGGCCCAGCCGATGCCCACCTT...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCTGCCCGGAGGGAGGGTaGAACGGATGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPCPEGG*NGCWWW
Trigger: CCACCACCAGCATCCGTTTCACCCTCCCTCCGGGCA...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGCTGGGGCCAGGGCTaGGGCGGACCTTATAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTSWGQG*GGPYRQ
Trigger: CTGCCTATAAGGTCCGCCTCAGCCCTGGCCCCAGCT...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAGAGGGCCCTGGATCTaGGGTGAGTCCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGRGPWI*GESSRW
Trigger: CCACCTGCTGGACTCACCTCAGATCCAGGGCCCTCT...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTCAACAGGGCAGCAGGTaGAGGGTGAAAGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTQQGSR*RVKGHG
Trigger: CCCGTGGCCTTTCACCCTTCACCTGCTGCCCTGTTG...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATACTCCTTGTGCCCTCCTaGCAGACCCAGGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCILLVPS*QTQARR
Trigger: CCTGCGAGCCTGGGTCTGGCAGGAGGGCACAAGGAG...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCTCCCGCGTCTCCTTGTaGCCTCCTGCCAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGSRVSL*PPARPR
Trigger: CCTGGGTCTGGCAGGAGGGCACAAGGAGACGCGGGA...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTCATGTCCTCACTGGCTaGACGCTGGGAACGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSHVLTG*TLGTRG
Trigger: GCCTCTCGTTCCCAGCGTGCAGCCAGTGAGGACATG...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGCCTTTGCTGAAGGCTaGAGGTGGATCCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTAFAEG*RWIRGP
Trigger: GGGCCCCCGGATCCACCTGCAGCCTTCAGCAAAGGC...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTGCACCCGGGATCCTGTaGCCATTTCAGTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSAPGIL*PFQSWH
Trigger: GTGCCAGGACTGAAATGGGCACAGGATCCCGGGTGC...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACATGGCAGCCAGGACCTTaGCGTTGGTCGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTWQPGP*RWSRCP
Trigger: CGGGCACCTCGACCAACGGCAAGGTCCTGGCTGCCA...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATATGGCAGCCAGGACCTTaGCGTTGGTCGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIWQPGP*RWSRCP
Trigger: CGGGCACCTCGACCAACGGCAAGGTCCTGGCTGCCA...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCGCTGCTGCCACTGCTaGTTCCACTGGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPRCCHC*FHWGLW
Trigger: CCACAGGCCCCAGTGGAAGCAGCAGTGGCAGCAGCG...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCTGCCCTCCCACTACTaGCCTCGCTGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGLPSHY*PRCCHC
Trigger: GCAGTGGCAGCAGCGAGGGCAGTAGTGGGAGGGCAG...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGGGTGTGTCCCCAGCTaGCCTCCCACTACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTGCVPS*PPTTAL
Trigger: GAGGGCAGTAGTGGGAGGGCAGCTGGGGACACACCC...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACGCCGTTGGTCCAGGGTaGGCCGCAGTGATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYAVGPG*AAVMSR
Trigger: CCTACTCATCACTGCGGCGCACCCTGGACCAACGGC...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGATGGGAAGATGTCTaGGTAGCGGGCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGGWEDV*VAGLEG
Trigger: GCCTTCCAGGCCCGCTACGCAGACATCTTCCCATCC...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTGTGGGAGTGGCTGCCTaGATGATCTTCTGGCGGACC +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSVGVAA*MIFWRT
Trigger: GGTCCGCCAGAAGATCATGCAGGCAGCCACTCCCAC...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCCTGGTGGGGACTTGCTaGCACTGGCGGAACCTGCAA +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGLVGTC*HWRNLQ
Trigger: TTGCAGGTTCCGCCAGTGGCAGCAAGTCCCCACCAG...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACTCTTCTGGCCCTGCCTaGTCCTGTGGCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYSSGPA*SCGCAS
Trigger: GGAGGCACAGCCACAGGAGCAGGCAGGGCCAGAAGA...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGAGGCCACACTGCTACTaGGGCTGCCACCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: CPQHREGIYIQGNRPHSARPHCY*GCHPGS
Trigger: GGAGCCAGGGTGGCAGCCGCAGTAGCAGTGTGGCCT...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATAGGAGTCTCCCCGGGCTaGCACACTGCTGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIGVSPG*HTAGLT
Trigger: AGTGAGGCCAGCAGTGTGGCAGCCCGGGGAGACTCC...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTGCGGCGCTTTCCAGGTaGCAGAGGCAACTGAATCTC +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGAALSR*QRQLNL
Trigger: GAGATTCAGTTGCCTCTGCCACCTGGAAAGCGCCGC...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAACAGGGGCCACTCCCTaGAACCTTGGTGTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGTGATP*NLGVRA
Trigger: AGCTCGGACACCAAGGTTCCAGGGAGTGGCCCCTGT...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGACAGGGGCCACTCCCTaGAACCTTGGTGTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGTGATP*NLGVRA
Trigger: AGCTCGGACACCAAGGTTCCAGGGAGTGGCCCCTGT...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTGGGGTACTGGCCCATTaGGGCCACTCCCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSGVLAH*GHSQYL
Trigger: CAAGTACTGGGAGTGGCCCCAATGGGCCAGTACCCC...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGCAGCAGTGGGTGCAGTaGCAGCCAGGACCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGQQWVQ*QPGPCR
Trigger: ACGGCAAGGTCCTGGCTGCCACTGCACCCACTGCTG...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCGCTAACCAGGGGCAGTaGCTGACCAGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPANQGQ*LTSPST
Trigger: GGTGGAGGGGCTGGTCAGCCACTGCCCCTGGTTAGC...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGGTGACACGCCCACCTaGCCAGGAGCCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGGDTPT*PGASKG
Trigger: TCCTTTGCTGGCTCCTGGCCAGGTGGGCGTGTCACC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATGGTGACACGCCCACCTaGCCAGGAGCCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHGDTPT*PGASKG
Trigger: TCCTTTGCTGGCTCCTGGCCAGGTGGGCGTGTCACC...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTCAGGCAGGAGGCAACTaGGGACTAGGCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSQAGGN*GLGTGD
Trigger: GTCACCTGTGCCTAGTCCCCAGTTGCCTCCTGCCTG...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCAGTGGCAGAGGCTGGTaGGCCCTTGGGCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGSGRGW*ALGQNG
Trigger: ACCATTCTGCCCAAGGGCCCACCAGCCTCTGCCACT...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGGCAGTGGCAGAGGCTaGTGGGCCCTTGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTGSGRG*WALGQN
Trigger: ATTCTGCCCAAGGGCCCACCAGCCTCTGCCACTGCC...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGACTAGTAGGGGCTaGAGTGGCAGTGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGRTSRG*SGSGRG
Trigger: GCCTCTGCCACTGCCACTCCAGCCCCTACTAGTCCT...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCAGGACTAGTAGGGGCTaGAGTGGCAGTGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGRTSRG*SGSGRG
Trigger: GCCTCTGCCACTGCCACTCCAGCCCCTACTAGTCCT...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACATTCCACTGGGGCCTGTaGCTGGAGCTGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTFHWGL*LELGWE
Trigger: CTCCCAGCCCAGCTCCAGCCACAGGCCCCAGTGGAA...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTGGGCAGCACCTCCTCTaGTCTAAACTCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSGQHLL*SKLRQL
Trigger: GAGCTGCCGGAGTTTAGACCAGAGGAGGTGCTGCCC...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACGGGCTGCCACACTGCTaGCCTCACTGTCCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYGLPHC*PHCPSK
Trigger: CTTCGAGGGACAGTGAGGCCAGCAGTGTGGCAGCCC...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTGAGTCCAGCAGGTaGGGGCAACAGCAGCAATGG +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGGESSR*GQQQQW
Trigger: CCATTGCTGCTGTTGCCCCCACCTGCTGGACTCACC...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTAGCAGTCGGTGCGGCTaGAGGCACAGTGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTSSRCG*RHSDGH
Trigger: GTGCCCATCACTGTGCCTCCAGCCGCACCGACTGCT...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACTGGGAGGTGCTGCAATaGCAGAGGGGCCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYWEVLQ*QRGLVL
Trigger: AAGCACCAGGCCCCTCTGTCATTGCAGCACCTCCCA...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACGCACAGGAGTGCTGCTaGCAGGCCGTACCACATTGG +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYAQECC*QAVPHW
Trigger: CCAATGTGGTACGGCCTGTCAGCAGCACTCCTGTGC...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGCCCAGTACTTGCTCCTaGGCCTGCAGGGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGPSTCS*ACRGCT
Trigger: AGTGCAACCCCTGCAGGCTCAGGAGCAAGTACTGGG...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATGTACTGCACCTGTGTaGTTCCCCCAGCCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNICTAPV*FPQPCL
Trigger: TAGGCAAGGCTGGGGGAATCACACAGGTGCAGTACA...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGACTGGACAGGAGAAACTaGCTGGGCTTTAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGLDRRN*LGFRGW
Trigger: CCACCCCCTAAAGCCCAGTCAGTTTCTCCTGTCCAG...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATGGCAACAGGACCTTCTaGGGCTGTGATGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHGNRTF*GCDVGP
Trigger: GGGACCCACATCACAGCCTCAGAAGGTCCTGTTGCC...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACCTGCCCCTCAAGTTCTaGTTCTGGGGCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYLPLKF*FWGSRL
Trigger: GAGCCTGCTGCCCCAGAATCAGAACTTGAGGGGCAG...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGCTGTGCGGTCAAAGGTaGAGATGTCCCCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGLCGQR*RCPPRT
Trigger: AGTGCGAGGGGGACATCTTCACCTTTGACCGCACAG...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTCAACAGCAGCAATGGTaGAGGCTGGCGGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTQQQQW*RLAGAR
Trigger: TCTCGCTCCCGCCAGCCTTCACCATTGCTGCTGTTG...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCGGGGTTGCGGACAATaGCAGGTGAGTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPRGCGQ*QVSPAA
Trigger: TGCAGCGGGACTCACCTGTCATTGTCCGCAACCCCG...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACATCCCCCACTGGGAGGTaGTGCAATGACAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTSPTGR*CNDRGA
Trigger: GGCCCCTCTGTCATTGCAGCACCTCCCAGTGGGGGA...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATATCCCCCACTGGGAGGTaGTGCAATGACAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCISPTGR*CNDRGA
Trigger: GGCCCCTCTGTCATTGCAGCACCTCCCAGTGGGGGA...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATACACCTGGCTGCAGGATaGCCAGGGGTACTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIHLAAG*PGVLAH
Trigger: ATGGGCCAGTACCCCTGGGCATCCTGCAGCCAGGTG...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTGTGGGCAGGATGTACTaGACCTGTGTGATTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGVGRMY*TCVIPP
Trigger: TGGGGGAATCACACAGGTGCAGTACATCCTGCCCAC...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATGCATGCAGAACTGGTaGCTAGAGGCAGAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNICMQNW*LEAECA
Trigger: GGCACACTCTGCCTCTAGGCACCAGTTCTGCATGCA...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGTGGGAGTGGCTGCCTaGATGATCTTCTGGCGGACC +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGVGVAA*MIFWRT
Trigger: GGTCCGCCAGAAGATCATGCAGGCAGCCACTCCCAC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAAGTGCAGACAGCCGTaGCCACCATCAGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGKCRQP*PPSVHL
Trigger: CAGGTGCACTGATGGTGGGCACGGCTGTCTGCACTT...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGACCTGGCCCACTGTCTaGCAGGCCCTCCATCTCTTT +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGTWPTV*QALHLF
Trigger: AAAGAGATGGAGGGCCTGGCAGACAGTGGGCCAGGT...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACACGCTCAGGTGGCGGCTaGGAACAGCAGTGCGTTGGA +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTRSGGG*EQQCVG
Trigger: TCCAACGCACTGCTGTTCGCAGCCGCCACCTGAGCG...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTGCACCATTTCCAATCTaGGTGGGCCTTGAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGAPFPI*VGLEVG
Trigger: GCCCACTTCAAGGCCCACCCAGATTGGAAATGGTGC...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACGGGGTACTGGCCCATTaGGGCCACTCCCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYGVLAH*GHSQYL
Trigger: CAAGTACTGGGAGTGGCCCCAATGGGCCAGTACCCC...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCGCTAACCAGGGGCAGTaGCTGACCAGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCANQGQ*LTSPST
Trigger: GGTGGAGGGGCTGGTCAGCCACTGCCCCTGGTTAGC...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGCTGGGCTCAGGGGTaGTACCAGGCCACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYSWAQG*YQATRC
Trigger: ACACCTAGTGGCCTGGTACCACCCCTGAGCCCAGCT...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAGCTGGGCTCAGGGGTaGTACCAGGCCACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGSWAQG*YQATRC
Trigger: ACACCTAGTGGCCTGGTACCACCCCTGAGCCCAGCT...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATTCCCGGCATTGTAGCTaGGCTCAGGGGTGGTACCAG +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHSRHCS*AQGWYQ
Trigger: CTGGTACCACCCCTGAGCCCAGCTACAATGCCGGGA...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCGGTGACACGCCCACCTaGCCAGGAGCCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPGDTPT*PGASKG
Trigger: TCCTTTGCTGGCTCCTGGCCAGGTGGGCGTGTCACC...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGTGGCAGAGGCTGGTaGGCCCTTGGGCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYSGRGW*ALGQNG
Trigger: ACCATTCTGCCCAAGGGCCCACCAGCCTCTGCCACT...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACGGGCAGCACCTCCTCTaGTCTAAACTCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYGQHLL*SKLRQL
Trigger: GAGCTGCCGGAGTTTAGACCAGAGGAGGTGCTGCCC...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGTGGCGGGGCAACTTaGGCAGTGCCAGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTSGGAT*AVPESE
Trigger: CTCGGACTCTGGCACTGCCCAAGTTGCCCCGCCACT...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCGGCCCTGGTAGCTGGTaGGGACTTGCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCGPGSW*GLAATG
Trigger: GCCAGTGGCAGCAAGTCCCCACCAGCTACCAGGGCC...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTCTTGGCCCTGGTAGCTaGTGGGGACTTGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTLGPGS*WGLAAT
Trigger: AGTGGCAGCAAGTCCCCACCAGCTACCAGGGCCAAG...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTCTCGTTCCTTGCACTTaGGATCAATGTCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGLVPCT*DQCRWC
Trigger: GCACCACCGACATTGATCTCAAGTGCAAGGAACGAG...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATATGGGAGGTGCTGCAATaGCAGAGGGGCCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIWEVLQ*QRGLVL
Trigger: AAGCACCAGGCCCCTCTGTCATTGCAGCACCTCCCA...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCGCACAGGAGTGCTGCTaGCAGGCCGTACCACATTGG +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPAQECC*QAVPHW
Trigger: CCAATGTGGTACGGCCTGTCAGCAGCACTCCTGTGC...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATACTGAATACACTAAACTaGCACCCATTGGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNILNTLN*HPLGSP
Trigger: GGGGCTCCCCAATGGGTGTCAGTTTAGTGTATTCAG...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGACCCTGGGCAATAAACTaGACAGCAGGCGATGCAGGA +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGPWAIN*TAGDAG
Trigger: TCCTGCATCGCCTGCTGTTCAGTTTATTGCCCAGGG...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGATGTACTGCACCTGTGTaGTTCCCCCAGCCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGCTAPV*FPQPCL
Trigger: TAGGCAAGGCTGGGGGAATCACACAGGTGCAGTACA...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGTGCCCGGAGGGAGGGTaGAACGGATGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRCPEGG*NGCWWW
Trigger: CCACCACCAGCATCCGTTTCACCCTCCCTCCGGGCA...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTCTGGACAGGAGAAACTaGCTGGGCTTTAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTLDRRN*LGFRGW
Trigger: CCACCCCCTAAAGCCCAGTCAGTTTCTCCTGTCCAG...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCGGCAACAGGACCTTCTaGGGCTGTGATGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPGNRTF*GCDVGP
Trigger: GGGACCCACATCACAGCCTCAGAAGGTCCTGTTGCC...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTCATCTTGCGCTTGGGTaGGGTGGGATCTTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTHLALG*GGIFRC
Trigger: GCACCTGAAGATCCCACCTCACCCAAGCGCAAGATG...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCACGGGCTGGAAGGGTaGAGAAGCCAGGCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCHGLEG*RSQAQG
Trigger: ACCTTGGGCCTGGCTTCTTCACCCTTCCAGCCCGTG...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACATTCCCGTCTCCGACATaGTCCGTTCCCGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTFPSPT*SVPASP
Trigger: AGGAGACGCGGGAACGGAGCATGTCGGAGACGGGAA...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCATGTCCTCACTGGCTaGACGCTGGGAACGAGAGGC +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGHVLTG*TLGTRG
Trigger: GCCTCTCGTTCCCAGCGTGCAGCCAGTGAGGACATG...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATAGCACCCGGGATCCTGTaGCCATTTCAGTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIAPGIL*PFQSWH
Trigger: GTGCCAGGACTGAAATGGGCACAGGATCCCGGGTGC...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGGTGACAGTAGCAGGTaGCTTCCCCACAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGGDSSR*LPHSAQ
Trigger: TTGGGCACTGTGGGGAAGGCACCTGCTACTGTCACC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACGGTGACAGTAGCAGGTaGCTTCCCCACAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYGDSSR*LPHSAQ
Trigger: TTGGGCACTGTGGGGAAGGCACCTGCTACTGTCACC...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGACCTAGAGGCAGAGTGTaGCCACCTGCTGACTGTACA +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGPRGRV*PPADCT
Trigger: TGTACAGTCAGCAGGTGGGCACACTCTGCCTCTAGG...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTTGCATGCAGAACTGGTaGCTAGAGGCAGAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSCMQNW*LEAECA
Trigger: GGCACACTCTGCCTCTAGGCACCAGTTCTGCATGCA...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGCACTACTGCCCTCGCTaGTGCCACTGCTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CPQHREGIYIQGNRPHSAHYCPR*CHCCFH
Trigger: GTGGAAGCAGCAGTGGCAGCAGCGAGGGCAGTAGTG...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATAGGATGGGAAGATGTCTaGGTAGCGGGCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIGWEDV*VAGLEG
Trigger: GCCTTCCAGGCCCGCTACGCAGACATCTTCCCATCC...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACACGTGCCCACCATCAGTaGACCTGGAGGTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTRAHHQ*TWRWCD
Trigger: GTCACACCACCTCCAGGTGCACTGATGGTGGGCACG...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATCAGCATCCTCAGGTTaGTTGGGCTCCACGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNISASSG*LGSTEE
Trigger: TTCTTCCGTGGAGCCCAAGCAACCTGAGGATGCTGA...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCCCCTTCTTGTACTTCTaGTGGGCGGCTGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGPFLYF*WAAVNG
Trigger: GCCATTGACAGCCGCCCAGCAGAAGTACAAGAAGGG...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGCTGGGACTCCTTCATaGAGCCATCCCGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGAGTPS*SHPEST
Trigger: TGTGCTCTCGGGATGGCTGCATGAAGGAGTCCCAGC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGCACCATTTCCAATCTaGGTGGGCCTTGAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGAPFPI*VGLEVG
Trigger: GCCCACTTCAAGGCCCACCCAGATTGGAAATGGTGC...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGTGGTCATGTCCTCACTaGCTGCACGCTGGGAACGAG +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGWSCPH*LHAGNE
Trigger: CTCGTTCCCAGCGTGCAGCCAGTGAGGACATGACCA...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATAAGACTGAGACTGAGGTaGAAGCAGGTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIRLRLR*KQVKRR
Trigger: CCTCCTCTTCACCTGCTTCCACCTCAGTCTCAGTCT...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATACCAGTGAAAAGGAGGTaGAGACTGAGACTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIPVKRR*RLRLRW
Trigger: CCACCTCAGTCTCAGTCTCCACCTCCTTTTCACTGG...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCGTGGAGCTGGCGAGGTaGCTGCTGCTGCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPVELAR*LLLLTS
Trigger: AGAAGTCAGCAGCAGCAGCCACCTCGCCAGCTCCAC...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATAGTGGAGCTGGCGAGGTaGCTGCTGCTGCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIVELAR*LLLLTS
Trigger: AGAAGTCAGCAGCAGCAGCCACCTCGCCAGCTCCAC...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGGAGCTACAGAGCTGGTaGGCCCATATGAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGELQSW*AHMRSL
Trigger: CAGTGACCTCATATGGGCCCACCAGCTCTGTAGCTC...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCGCCAGCAAAGGAGCTTaGCCTGCTGAGAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGASKGA*PAESRG
Trigger: GCCTCTGCTCTCAGCAGGCCAAGCTCCTTTGCTGGC...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005578.13
CDS-3UTR CCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGGTCTTCTTCAGGGGTaGGGGCCGCACCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTGLLQG*GPHLHL
Trigger: AAGATGAAGGTGCGGCCCCCACCCCTGAAGAAGACC...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAAGGCTGCTGTGGCCTaGGCTGATGGGAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGKAAVA*ADGKKP
Trigger: TGGCTTCTTCCCATCAGCCCAGGCCACAGCAGCCTT...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCTGGAAGGCTGCTGTaGCCTGGGCTGATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPPGRLL*PGLMGR
Trigger: TCTTCCCATCAGCCCAGGCCACAGCAGCCTTCCAGG...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGCCAGCAAAGGAGCTTaGCCTGAGAGCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGASKGA*PESRGC
Trigger: ACAGCCTCTGCTCTCAGGCCAAGCTCCTTTGCTGGC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATGCCAGCAAAGGAGCTTaGCCTGAGAGCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHASKGA*PESRGC
Trigger: ACAGCCTCTGCTCTCAGGCCAAGCTCCTTTGCTGGC...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATACACCATCAGTGCACCTaGAGGTGGTGTGACATCCAA +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIHHQCT*RWCDIQ
Trigger: TTGGATGTCACACCACCTCCAGGTGCACTGATGGTG...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACATTGTGGCAGTGTGCCTaGTGGGCCTGCATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTLWQCA*WACMGA
Trigger: AGCTCCCATGCAGGCCCACCAGGCACACTGCCACAA...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGGGGGCCCAGGTCTGGTaGTGTCAGCACGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRGAQVW*CQHACL
Trigger: AAGGCAGGCGTGCTGACACCACCAGACCTGGGCCCC...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGAAGCCAGGCCCAAGGTaGGCATCGGCTGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRKPGPR*ASAGPQ
Trigger: CTGTGGCCCAGCCGATGCCCACCTTGGGCCTGGCTT...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATAAGGAAGGCATCATCATaGTCACTCTCGGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIRKASS*SLSVSL
Trigger: CAGTGAGACCGAGAGTGATCATGATGATGCCTTCCT...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGCTTCTTCCTCACAGATaGCCATCCGCTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGLLPHR*PSAPHH
Trigger: GTGATGAGGAGCGGATGGTCATCTGTGAGGAAGAAG...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTCTCGTTCCTTGCACTTaGGATCAATGTCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSLVPCT*DQCRWC
Trigger: GCACCACCGACATTGATCTCAAGTGCAAGGAACGAG...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAACCTGCTATGTCATTTaGAGATGCCTCAGCCCGACC +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGTCYVI*RCLSPT
Trigger: GGTCGGGCTGAGGCATCTTCAAATGACATAGCAGGT...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATAAGTGTGCCCACCTGCTaGCTGTACATAGGTGATTCT +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNISVPTC*LYIGDS
Trigger: AGAATCACCTATGTACAGTCAGCAGGTGGGCACACT...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCTGCCCCTCAAGTTCTaGTTCTGGGGCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCLPLKF*FWGSRL
Trigger: GAGCCTGCTGCCCCAGAATCAGAACTTGAGGGGCAG...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCATCTTGCGCTTGGGTaGGGTGGGATCTTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPHLALG*GGIFRC
Trigger: GCACCTGAAGATCCCACCTCACCCAAGCGCAAGATG...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATACATCTTGCGCTTGGGTaGGGTGGGATCTTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIHLALG*GGIFRC
Trigger: GCACCTGAAGATCCCACCTCACCCAAGCGCAAGATG...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATACTGTGCGGTCAAAGGTaGAGATGTCCCCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCILCGQR*RCPPRT
Trigger: AGTGCGAGGGGGACATCTTCACCTTTGACCGCACAG...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTGTGCCTTCCCCACAGTaGCCAATAAAGGTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSVPSPQ*PIKVQL
Trigger: TAGCTGGACCTTTATTGGGCACTGTGGGGAAGGCAC...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGGTGACAGTAGCAGGTaGCTTCCCCACAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTGDSSR*LPHSAQ
Trigger: TTGGGCACTGTGGGGAAGGCACCTGCTACTGTCACC...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGTGGGCAGGATGTACTaGACCTGTGTGATTCCCCCA +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGVGRMY*TCVIPP
Trigger: TGGGGGAATCACACAGGTGCAGTACATCCTGCCCAC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATCCTAGAGGCAGAGTGTaGCCACCTGCTGACTGTACA +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHPRGRV*PPADCT
Trigger: TGTACAGTCAGCAGGTGGGCACACTCTGCCTCTAGG...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTGCTGCCAGGGTAAAATaGTGTTATGACAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGAARVK*CYDRTS
Trigger: GGAGGTCCTGTCATAACAGCATTTTACCCTGGCAGC...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAACGTCTCCTCATCTTaGGCTTGGGTGAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGNVSSS*AWVRWD
Trigger: ATCCCACCTCACCCAAGCGCAAGATGAGGAGACGTT...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTGTAGGATCATTGGGCTaGAGCTCTGGATGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSVGSLG*SSGCVP
Trigger: GGGAACACATCCAGAGCTGCAGCCCAATGATCCTAC...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCTCCTCCTCTGGGCCTaGAGGGTGCTTCCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCLLLWA*RVLPQQ
Trigger: TTGCTGAGGAAGCACCCTGCAGGCCCAGAGGAGGAG...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGCCAGTGAGGCCACACTaGTACTGCGGCTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRPVRPH*YCGCHP
Trigger: AGGGTGGCAGCCGCAGTAGCAGTGTGGCCTCACTGG...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCGGAAGGTGGGTAGGATaGCAGAGGAATGGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGGRWVG*QRNGAH
Trigger: GTGAGCGCCATTCCTCTGGCATCCTACCCACCTTCC...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATAATGGGCCGACGAATATaGTCCTTCTCCCGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIMGRRI*SFSRLL
Trigger: TAACAAGCGGGAGAAGGACCATATTCGTCGGCCCAT...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGTTGGGGTGCCGCTGGTaGACCAAGGCCCGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWLGCRW*TKARCR
Trigger: GCGGCACCGGGCCTTGGTCCACCAGCGGCACCCCAA...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTATTTCTGCTTCTCTTTaGGCCCCAGGGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTISASL*APGRTT
Trigger: GGTGGTACGCCCTGGGGCCCAAAGAGAAGCAGAAAT...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGGGTGGGCCTTGAAGTaGGCCTCTTTCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTGWALK*ASFTWK
Trigger: CTTCCAGGTGAAAGAGGCCCACTTCAAGGCCCACCC...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATATGGTCATGTCCTCACTaGCTGCACGCTGGGAACGAG +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIWSCPH*LHAGNE
Trigger: CTCGTTCCCAGCGTGCAGCCAGTGAGGACATGACCA...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCTGGTCATGTCCTCACTaGCTGCACGCTGGGAACGAG +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGWSCPH*LHAGNE
Trigger: CTCGTTCCCAGCGTGCAGCCAGTGAGGACATGACCA...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTAGGGTTGGACGGCAATaGGTAAAGGAGGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTRVGRQ*VKEERM
Trigger: CATCCGCTCCTCCTTTACCCATTGCCGTCCAACCCT...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGCTGAAGGCTGCAGGTaGATCCGGGGGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQAEGCR*IRGPWR
Trigger: CCTCCAGGGCCCCCGGATCCACCTGCAGCCTTCAGC...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGCCAGTGAAAAGGAGGTaGAGACTGAGACTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGPVKRR*RLRLRW
Trigger: CCACCTCAGTCTCAGTCTCCACCTCCTTTTCACTGG...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCTACCAAATGTGGAGCTaGCGAGGTGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGYQMWS*RGGCCC
Trigger: GCAGCAGCAGCCACCTCGCCAGCTCCACATTTGGTA...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACCCTGAAGGTGTGGCCTaGACAGGAGAAACTGACTGG +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYPEGVA*TGETDW
Trigger: CCAGTCAGTTTCTCCTGTCCAGGCCACACCTTCAGG...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGCCTGAAGGTGTGGCCTaGACAGGAGAAACTGACTGG +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGPEGVA*TGETDW
Trigger: CCAGTCAGTTTCTCCTGTCCAGGCCACACCTTCAGG...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGCCAGAGCTACAGAGCTaGTGGGCCCATATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGPELQS*WAHMRS
Trigger: TGACCTCATATGGGCCCACCAGCTCTGTAGCTCTGG...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCAGTGTAGACCAGGCTTaGCGGAGCTTGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGSVDQA*RSLGRW
Trigger: CCACCTTCCCAAGCTCCGCCAAGCCTGGTCTACACT...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGCAGGTGGAGTGGTACTaGTGGCTACAGTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGQVEWY*WLQCRP
Trigger: TGGTCTACACTGTAGCCACCAGTACCACTCCACCTG...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTTTTCTGGGGAGCTTTTaGGCTGGGTCGCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSFLGSF*AGSLSF
Trigger: AAAGCTCAGCGACCCAGCCCAAAAGCTCCCCAGAAA...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATTGCGCTTGGGTGAGGTaGGATCTTCAGGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHCAWVR*DLQVLS
Trigger: ACTCAGCACCTGAAGATCCCACCTCACCCAAGCGCA...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGAAGGCTGCTGTGGCCTaGGCTGATGGGAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: CPQHREGIYIQGNRPHSAKAAVA*ADGKKP
Trigger: TGGCTTCTTCCCATCAGCCCAGGCCACAGCAGCCTT...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCTGGAAGGCTGCTGTaGCCTGGGCTGATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCPGRLL*PGLMGR
Trigger: TCTTCCCATCAGCCCAGGCCACAGCAGCCTTCCAGG...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATACAGTGCACCTGGAGGTaGTGTGACATCCAAAACAAC +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIQCTWR*CDIQNN
Trigger: GTTGTTTTGGATGTCACACCACCTCCAGGTGCACTG...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTCTGGGCGGCTGTCAATaGCGTGCGAGCACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSLGGCQ*RASTGC
Trigger: GCAGCCCGTGCTCGCACGCCATTGACAGCCGCCCAG...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCGAGGGGGTAGGTGTGTaGGACACGGAGTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCEGVGV*DTESTP
Trigger: TGGAGTGGACTCCGTGTCCCACACACCTACCCCCTC...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATAATCTGGGTCAGTTCTTaGAGTGCTTGGCTGTCTACT +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIIWVSS*SAWLST
Trigger: AGTAGACAGCCAAGCACTTCAAGAACTGACCCAGAT...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTCTTCTTCCTCACAGATaGCCATCCGCTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTLLPHR*PSAPHH
Trigger: GTGATGAGGAGCGGATGGTCATCTGTGAGGAAGAAG...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATACCCTGGGCAATAAACTaGACAGCAGGCGATGCAGGA +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIPWAIN*TAGDAG
Trigger: TCCTGCATCGCCTGCTGTTCAGTTTATTGCCCAGGG...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACATGTACTGCACCTGTGTaGTTCCCCCAGCCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTCTAPV*FPQPCL
Trigger: TAGGCAAGGCTGGGGGAATCACACAGGTGCAGTACA...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGGGCAACAGGACCTTCTaGGGCTGTGATGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRGNRTF*GCDVGP
Trigger: GGGACCCACATCACAGCCTCAGAAGGTCCTGTTGCC...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATCAAAGGAGCTTGGCCTaGGAGCAGAGGCTGTACAAA +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHQRSLA*EQRLYK
Trigger: TTTGTACAGCCTCTGCTCTCAGGCCAAGCTCCTTTG...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGTCGGGGCCCGAGACTTaGATGTGGCTGTCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRSGPET*MWLSCD
Trigger: GTCGCAAGACAGCCACATTCAAGTCTCGGGCCCCGA...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTGTCCTCCAGGTCGGCTaGGTGCTCACTGGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSVLQVG*VLTGRV
Trigger: GACACGGCCAGTGAGCACTCAGCCGACCTGGAGGAC...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAAAAGAGCGGCGAGGGTaGGGGAGAGGGGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQKERRG*GRGGWR
Trigger: TCTCCAGCCCCCTCTCCCTCACCCTCGCCGCTCTTT...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTTCCTTCACCAGGAGCTaGAAAAGATCCTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTSFTRS*KRSWST
Trigger: GGTGCTCCAGGATCTTTTGCAGCTCCTGGTGAAGGA...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTGCCTTCCCCACAGTaGCCAATAAAGGTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTVPSPQ*PIKVQL
Trigger: TAGCTGGACCTTTATTGGGCACTGTGGGGAAGGCAC...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGGTGGGCAGGATGTACTaGACCTGTGTGATTCCCCCA +
Preference number: 4 (lower is better)
Translates to: CPQHREGIYIQGNRPHSAVGRMY*TCVIPP
Trigger: TGGGGGAATCACACAGGTGCAGTACATCCTGCCCAC...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATATGAGCTGGGGAATTTaGTGGCAGTCTCAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHMSWGI*WQSQGL
Trigger: AAGGCCCTGAGACTGCCAGCAAATTCCCCAGCTCAT...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGCACTACTGCCCTCGCTaGTGCCACTGCTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRHYCPR*CHCCFH
Trigger: GTGGAAGCAGCAGTGGCAGCAGCGAGGGCAGTAGTG...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGCACAGCCGGCGCCACTaGTTGCCATTGAACTTCTTT +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGHSRRH*LPLNFF
Trigger: AAAGAAGTTCAATGGCAAGCAGTGGCGCCGGCTGTG...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAACAGGTGAGTCCCGCTaGACGGCGGGTACCCTTCGC +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQTGESR*TAGTLR
Trigger: GCGAAGGGTACCCGCCGTGCAGCGGGACTCACCTGT...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCGCGGCGCTTTCCAGGTaGCAGAGGCAACTGAATCTC +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCAALSR*QRQLNL
Trigger: GAGATTCAGTTGCCTCTGCCACCTGGAAAGCGCCGC...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGCATTTCCAATCTGGGTaGGCCTTGAAGTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGHFQSG*ALKWAS
Trigger: AGAGGCCCACTTCAAGGCCCACCCAGATTGGAAATG...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCAGGGTTGGACGGCAATaGGTAAAGGAGGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGRVGRQ*VKEERM
Trigger: CATCCGCTCCTCCTTTACCCATTGCCGTCCAACCCT...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGCTCAGGGTCCAGGGTTaGACGGCAATGGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: CPQHREGIYIQGNRPHSALRVQG*TAMGKG
Trigger: TCCTTTACCCATTGCCGTCCAACCCTGGACCCTGAG...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACACTCAGGGTCCAGGGTTaGACGGCAATGGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTLRVQG*TAMGKG
Trigger: TCCTTTACCCATTGCCGTCCAACCCTGGACCCTGAG...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTAGACTGAGACTGAGGTaGAAGCAGGTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTRLRLR*KQVKRR
Trigger: CCTCCTCTTCACCTGCTTCCACCTCAGTCTCAGTCT...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGGTGGAGCTGGCGAGGTaGCTGCTGCTGCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRVELAR*LLLLTS
Trigger: AGAAGTCAGCAGCAGCAGCCACCTCGCCAGCTCCAC...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCTGAAGGTGTGGCCTaGACAGGAGAAACTGACTGG +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPPEGVA*TGETDW
Trigger: CCAGTCAGTTTCTCCTGTCCAGGCCACACCTTCAGG...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTGCTAACCAGGGGCAGTaGCTGACCAGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSANQGQ*LTSPST
Trigger: GGTGGAGGGGCTGGTCAGCCACTGCCCCTGGTTAGC...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCGAGCTACAGAGCTGGTaGGCCCATATGAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGELQSW*AHMRSL
Trigger: CAGTGACCTCATATGGGCCCACCAGCTCTGTAGCTC...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGAGCTACAGAGCTaGTGGGCCCATATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPPELQS*WAHMRS
Trigger: TGACCTCATATGGGCCCACCAGCTCTGTAGCTCTGG...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATACCAGAGCTACAGAGCTaGTGGGCCCATATGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIPELQS*WAHMRS
Trigger: TGACCTCATATGGGCCCACCAGCTCTGTAGCTCTGG...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCGTGGAGTGGTACTGGTaGCTACAGTGTAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPVEWYW*LQCRPG
Trigger: GCCTGGTCTACACTGTAGCCACCAGTACCACTCCAC...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATAGTGGAGTGGTACTGGTaGCTACAGTGTAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIVEWYW*LQCRPG
Trigger: GCCTGGTCTACACTGTAGCCACCAGTACCACTCCAC...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGAGTGGCAGAGGCTGGTaGGCCCTTGGGCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRSGRGW*ALGQNG
Trigger: ACCATTCTGCCCAAGGGCCCACCAGCCTCTGCCACT...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGCTGCCTTTACTTTCTaGGGAGCTTTTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGAAFTF*GAFGLG
Trigger: ACCCAGCCCAAAAGCTCCCCAGAAAGTAAAGGCAGC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATGCTGCCTTTACTTTCTaGGGAGCTTTTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHAAFTF*GAFGLG
Trigger: ACCCAGCCCAAAAGCTCCCCAGAAAGTAAAGGCAGC...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGCAGGAATGCTGGCAATaGCTGCCTTTACTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGQECWQ*LPLLSG
Trigger: CCCAGAAAGTAAAGGCAGCCATTGCCAGCATTCCTG...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAATTCCACTGGGGCCTGTaGCTGGAGCTGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQFHWGL*LELGWE
Trigger: CTCCCAGCCCAGCTCCAGCCACAGGCCCCAGTGGAA...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGTGCGCTTGGGTGAGGTaGGATCTTCAGGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: CPQHREGIYIQGNRPHSACAWVR*DLQVLS
Trigger: ACTCAGCACCTGAAGATCCCACCTCACCCAAGCGCA...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATATGCGCTTGGGTGAGGTaGGATCTTCAGGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCICAWVR*DLQVLS
Trigger: ACTCAGCACCTGAAGATCCCACCTCACCCAAGCGCA...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACAACCAGGGCCCGCCGTTaGTCCAGGGTGCGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTTRARR*SRVRRS
Trigger: ACTGCGGCGCACCCTGGACCAACGGCGGGCCCTGGT...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACCAGACACACCTTGGATaGGAAGATGTCTGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYQTHLG*EDVCVA
Trigger: CGCTACGCAGACATCTTCCCATCCAAGGTGTGTCTG...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAAGGGGTGCCCAGGGATaGTGGGTGCTTCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQRGAQG*WVLLLP
Trigger: GGGGAGGAGAAGCACCCACCATCCCTGGGCACCCCT...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCAAGGTTAGGTTGGTCTaGAAGGTGGGTAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGKVRLV*KVGRMP
Trigger: TGGCATCCTACCCACCTTCCAGACCAACCTAACCTT...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGGAAGGCATCATCATaGTCACTCTCGGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYRKASS*SLSVSL
Trigger: CAGTGAGACCGAGAGTGATCATGATGATGCCTTCCT...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGATCTGGGTCAGTTCTTaGAGTGCTTGGCTGTCTACT +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGIWVSS*SAWLST
Trigger: AGTAGACAGCCAAGCACTTCAAGAACTGACCCAGAT...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTGCCGTACCACATTGGTaGCCATGGTGGCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSAVPHW*PWWQQG
Trigger: GCCCTGCTGCCACCATGGTCACCAATGTGGTACGGC...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGACCTGCTATGTCATTTaGAGATGCCTCAGCCCGACC +
Preference number: 4 (lower is better)
Translates to: CPQHREGIYIQGNRPHSATCYVI*RCLSPT
Trigger: GGTCGGGCTGAGGCATCTTCAAATGACATAGCAGGT...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCTGAATACACTAAACTaGCACCCATTGGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGLNTLN*HPLGSP
Trigger: GGGGCTCCCCAATGGGTGTCAGTTTAGTGTATTCAG...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCCTGACTGTACATAGGTaGTTCTTGTGGAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGLTVHR*FLWKRA
Trigger: TGCCCTCTTCCACAAGAATCACCTATGTACAGTCAG...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGCTGACTGTACATAGGTaGTTCTTGTGGAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGLTVHR*FLWKRA
Trigger: TGCCCTCTTCCACAAGAATCACCTATGTACAGTCAG...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGGTAAAATGCTGTTATaGCAGGACCTCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGGKMLL*QDLQRL
Trigger: CAGCCTCTGGAGGTCCTGTCATAACAGCATTTTACC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATGGTAAAATGCTGTTATaGCAGGACCTCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHGKMLL*QDLQRL
Trigger: CAGCCTCTGGAGGTCCTGTCATAACAGCATTTTACC...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCAAAGGAGCTTGGCCTaGGAGCAGAGGCTGTACAAA +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGQRSLA*EQRLYK
Trigger: TTTGTACAGCCTCTGCTCTCAGGCCAAGCTCCTTTG...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGTGGCTGTCTTGCGACTaGGTGAGGGCTCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWWLSCD*VRAPSG
Trigger: GCCGCTGGGAGCCCTCACTCAGTCGCAAGACAGCCA...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACACACCTGGAGGTGGTGTaGCATCCAAAACAACGTCCA +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTHLEVV*HPKQRP
Trigger: TGGACGTTGTTTTGGATGTCACACCACCTCCAGGTG...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGCTCCTTGTGCCCTCCTaGCAGACCCAGGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWLLVPS*QTQARR
Trigger: CCTGCGAGCCTGGGTCTGGCAGGAGGGCACAAGGAG...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGTCCCGCGTCTCCTTGTaGCCTCCTGCCAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWSRVSL*PPARPR
Trigger: CCTGGGTCTGGCAGGAGGGCACAAGGAGACGCGGGA...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCTGCATGCAGAACTGGTaGCTAGAGGCAGAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCCMQNW*LEAECA
Trigger: GGCACACTCTGCCTCTAGGCACCAGTTCTGCATGCA...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGCTGCCAGGGTAAAATaGTGTTATGACAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGAARVK*CYDRTS
Trigger: GGAGGTCCTGTCATAACAGCATTTTACCCTGGCAGC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTAAGTGGGTGCAGGGCTaGCAGGGTAAAATGCTGTTA +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTKWVQG*QGKMLL
Trigger: TAACAGCATTTTACCCTGGCAGCCCTGCACCCACTT...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAAGTGGGTGCAGGGCTaGCAGGGTAAAATGCTGTTA +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGKWVQG*QGKMLL
Trigger: TAACAGCATTTTACCCTGGCAGCCCTGCACCCACTT...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAATGCTGGCAATGGCTaGCTTTACTTTCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYNAGNG*LYFLGS
Trigger: GCTCCCCAGAAAGTAAAGGCAGCCATTGCCAGCATT...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATAAACGTCTCCTCATCTTaGGCTTGGGTGAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCINVSSS*AWVRWD
Trigger: ATCCCACCTCACCCAAGCGCAAGATGAGGAGACGTT...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACATCAGCCCCAGGGGGCTaGTCTGTGGGAGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTSAPGG*SVGVAA
Trigger: GGCAGCCACTCCCACAGAGCAGCCCCCTGGGGCTGA...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATACACCAACATTTCCAGTaGCATGCTCCTCCACATATT +
Preference number: 4 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIHQHFQ*HAPPHI
Trigger: AATATGTGGAGGAGCATGGCACTGGAAATGTTGGTG...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATATGGGCCGACGAATATaGTCCTTCTCCCGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHMGRRI*SFSRLL
Trigger: TAACAAGCGGGAGAAGGACCATATTCGTCGGCCCAT...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGGGGTGGGCCTTGAAGTaGGCCTCTTTCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRGWALK*ASFTWK
Trigger: CTTCCAGGTGAAAGAGGCCCACTTCAAGGCCCACCC...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCAGACTGAGACTGAGGTaGAAGCAGGTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGRLRLR*KQVKRR
Trigger: CCTCCTCTTCACCTGCTTCCACCTCAGTCTCAGTCT...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTTGCCCATTTCAGTCCTaGCACCTGCTATGTCATTTG +
Preference number: 4 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSCPFQS*HLLCHL
Trigger: CAAATGACATAGCAGGTGCCAGGACTGAAATGGGCA...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGTACCAAATGTGGAGCTaGCGAGGTGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRYQMWS*RGGCCC
Trigger: GCAGCAGCAGCCACCTCGCCAGCTCCACATTTGGTA...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGATGTTGGGCACCATTTTaGACAGGTACTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGCWAPF*TGTEKG
Trigger: GCCTTTCTCAGTACCTGTCCAAAATGGTGCCCAACA...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATATTTCTGGGGAGCTTTTaGGCTGGGTCGCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIFLGSF*AGSLSF
Trigger: AAAGCTCAGCGACCCAGCCCAAAAGCTCCCCAGAAA...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGAAGGCTGCTGTGGCCTaGGCTGATGGGAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRKAAVA*ADGKKP
Trigger: TGGCTTCTTCCCATCAGCCCAGGCCACAGCAGCCTT...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCAGACACACCTTGGATaGGAAGATGTCTGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGQTHLG*EDVCVA
Trigger: CGCTACGCAGACATCTTCCCATCCAAGGTGTGTCTG...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAATGGGGGCAGGGTGGCTaGGATAGCTGCTCGGCACTA +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQWGQGG*DSCSAL
Trigger: TAGTGCCGAGCAGCTATCCCAGCCACCCTGCCCCCA...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCAGGAAGGCATCATCATaGTCACTCTCGGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPRKASS*SLSVSL
Trigger: CAGTGAGACCGAGAGTGATCATGATGATGCCTTCCT...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAATGGGAGGTGCTGCAATaGCAGAGGGGCCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQWEVLQ*QRGLVL
Trigger: AAGCACCAGGCCCCTCTGTCATTGCAGCACCTCCCA...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCACCTGCTATGTCATTTaGAGATGCCTCAGCCCGACC +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCTCYVI*RCLSPT
Trigger: GGTCGGGCTGAGGCATCTTCAAATGACATAGCAGGT...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAACTGCCCCTCAAGTTCTaGTTCTGGGGCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQLPLKF*FWGSRL
Trigger: GAGCCTGCTGCCCCAGAATCAGAACTTGAGGGGCAG...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGCCACTGCTTGCCATTaGACTTCTTTCGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTATACH*TSFGCH
Trigger: ATGGCATCCGAAAGAAGTTCAATGGCAAGCAGTGGC...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACATGGGCCTCACTAGGCTaGACAGAGGGGTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTWASLG*TEGSGW
Trigger: CCAGCCCGACCCCTCTGTGCAGCCTAGTGAGGCCCA...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGTCTTTCGGTCCTTGTTaGACCATTTCCAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: REQATFRAELERTNGFLGSFGPC*TISNLG
Trigger: ACCCAGATTGGAAATGGTGCAACAAGGACCGAAAGA...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGATCTTTCGGTCCTTGTTaGACCATTTCCAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGSFGPC*TISNLG
Trigger: ACCCAGATTGGAAATGGTGCAACAAGGACCGAAAGA...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAACATGTCCTCACTGGCTaGACGCTGGGAACGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQHVLTG*TLGTRG
Trigger: GCCTCTCGTTCCCAGCGTGCAGCCAGTGAGGACATG...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCAATGCTGGCAATGGCTaGCTTTACTTTCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGNAGNG*LYFLGS
Trigger: GCTCCCCAGAAAGTAAAGGCAGCCATTGCCAGCATT...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGATCTCGGATCTTTAATTaGAGACACACCTTGGATGGG +
Preference number: 4 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGSRIFN*RHTLDG
Trigger: CCCATCCAAGGTGTGTCTGCAATTAAAGATCCGAGA...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCATGAGTCTCGTTCCTTaGGCAAGGCACTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGMSLVP*ARHSET
Trigger: AGTCTCTGAGTGCCTTGCCCAAGGAACGAGACTCAT...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGCTCAGGGTCCAGGGTTaGACGGCAATGGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRLRVQG*TAMGKG
Trigger: TCCTTTACCCATTGCCGTCCAACCCTGGACCCTGAG...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTTGCCCATTTCAGTCCTaGCACCTGCTATGTCATTTG +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTCPFQS*HLLCHL
Trigger: CAAATGACATAGCAGGTGCCAGGACTGAAATGGGCA...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGGTGGAGTGGTACTGGTaGCTACAGTGTAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRVEWYW*LQCRPG
Trigger: GCCTGGTCTACACTGTAGCCACCAGTACCACTCCAC...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCAGGAATGCTGGCAATaGCTGCCTTTACTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGQECWQ*LPLLSG
Trigger: CCCAGAAAGTAAAGGCAGCCATTGCCAGCATTCCTG...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAACCCCACAGGAATGCTaGCAATGGCTGCCTTTACTT +
Preference number: 4 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTTPQEC*QWLPLL
Trigger: AAGTAAAGGCAGCCATTGCCAGCATTCCTGTGGGGT...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAGTCTGAAGATGAGCTaGGGAATTTGCTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: EGICPCCPQHREGIYIQGSLKMS*GICWQS
Trigger: AGACTGCCAGCAAATTCCCCAGCTCATCTTCAGACT...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATAGTCTGAAGATGAGCTaGGGAATTTGCTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: PKAHTTLQLAALTGAILHSLKMS*GICWQS
Trigger: AGACTGCCAGCAAATTCCCCAGCTCATCTTCAGACT...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTCCTGGAAGGCTGCTGTaGCCTGGGCTGATGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSPGRLL*PGLMGR
Trigger: TCTTCCCATCAGCCCAGGCCACAGCAGCCTTCCAGG...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCAGACACACCTTGGATaGGAAGATGTCTGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCQTHLG*EDVCVA
Trigger: CGCTACGCAGACATCTTCCCATCCAAGGTGTGTCTG...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACATTGCAGACACACCTTaGATGGGAAGATGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYIADTP*MGRCLR
Trigger: ACGCAGACATCTTCCCATCCAAGGTGTGTCTGCAAT...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATATCTCTTTGGTTCTCATaGACAAGTGGCGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCISLWFS*TSGASS
Trigger: ACTGCTCGCGCCACTTGTCCATGAGAACCAAAGAGA...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTAGCAATGGTGAAGGCTaGCGGGAGCGAGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSSNGEG*REREKG
Trigger: GCCCTTCTCTCGCTCCCGCCAGCCTTCACCATTGCT...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCATCTGGGTCAGTTCTTaGAGTGCTTGGCTGTCTACT +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPIWVSS*SAWLST
Trigger: AGTAGACAGCCAAGCACTTCAAGAACTGACCCAGAT...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGCTGAATACACTAAACTaGCACCCATTGGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRLNTLN*HPLGSP
Trigger: GGGGCTCCCCAATGGGTGTCAGTTTAGTGTATTCAG...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATAATTTTGGACAGGTACTaGGAAAGGCGAGCTAACCAG +
Preference number: 4 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIILDRY*ERRANQ
Trigger: CTGGTTAGCTCGCCTTTCTCAGTACCTGTCCAAAAT...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAACTGTGCGGTCAAAGGTaGAGATGTCCCCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQLCGQR*RCPPRT
Trigger: AGTGCGAGGGGGACATCTTCACCTTTGACCGCACAG...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACACCCACTGGGAGGTGCTaGAATGACAGAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTPTGRC*NDRGAW
Trigger: CCAGGCCCCTCTGTCATTGCAGCACCTCCCAGTGGG...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGATGAGCTGGGGAATTTaGTGGCAGTCTCAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRMSWGI*WQSQGL
Trigger: AAGGCCCTGAGACTGCCAGCAAATTCCCCAGCTCAT...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTCCCAGTCAAACTCAGTaGTTCCTTCCCGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSPSQTQ*FLPGLP
Trigger: TGGCAGCCCGGGAAGGAAGCACTGAGTTTGACTGGG...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAACAGAGGGGTCGGGCTaGCTGGGTGCCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGTEGSG*LGARKG
Trigger: CCCCTTCCTGGCACCCAGCCAGCCCGACCCCTCTGT...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCATGAGTCTCGTTCCTTaGGCAAGGCACTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCMSLVP*ARHSET
Trigger: AGTCTCTGAGTGCCTTGCCCAAGGAACGAGACTCAT...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCATGGGCCGACGAATATaGTCCTTCTCCCGCTTGTTA +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCMGRRI*SFSRLL
Trigger: TAACAAGCGGGAGAAGGACCATATTCGTCGGCCCAT...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAAGTGTAGACCAGGCTTaGCGGAGCTTGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQSVDQA*RSLGRW
Trigger: CCACCTTCCCAAGCTCCGCCAAGCCTGGTCTACACT...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGCAGGTGGAGTGGTACTaGTGGCTACAGTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRQVEWY*WLQCRP
Trigger: TGGTCTACACTGTAGCCACCAGTACCACTCCACCTG...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGTTTCTGGGGAGCTTTTaGGCTGGGTCGCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRFLGSF*AGSLSF
Trigger: AAAGCTCAGCGACCCAGCCCAAAAGCTCCCCAGAAA...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCAGTCTGAAGATGAGCTaGGGAATTTGCTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPSLKMS*GICWQS
Trigger: AGACTGCCAGCAAATTCCCCAGCTCATCTTCAGACT...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTCTGAGTCTAGGTCCGTaGAATTCTTCCTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: APNWKGQMASWGGGNYPTLSLGP*NSSSSF
Trigger: GAAAGAAGAGGAAGAATTCCACGGACCTAGACTCAG...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAACCCTGGGCAATAAACTaGACAGCAGGCGATGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQPWAIN*TAGDAG
Trigger: TCCTGCATCGCCTGCTGTTCAGTTTATTGCCCAGGG...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGATGCCCGGAGGGAGGGTaGAACGGATGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGCPEGG*NGCWWW
Trigger: CCACCACCAGCATCCGTTTCACCCTCCCTCCGGGCA...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGCTGGACAGGAGAAACTaGCTGGGCTTTAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWLDRRN*LGFRGW
Trigger: CCACCCCCTAAAGCCCAGTCAGTTTCTCCTGTCCAG...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAAGGAGCTTGGCCTGCTaGGAGCAGAGGCTGTACAAA +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQRSLAC*EQRLYK
Trigger: TTTGTACAGCCTCTGCTCTCAGCAGGCCAAGCTCCT...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005578.13
CDS-3UTR TCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTAGGCATTTATGGGGCTaGAATTGGCAGGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSRHLWG*NWQGGS
Trigger: GCTTCCGCCCTGCCAATTTCAGCCCCATAAATGCCT...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAGCCCTGGATCTGAGGTaGGTCCAGCAGGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGALDLR*VQQVGA
Trigger: TGCCCCCACCTGCTGGACTCACCTCAGATCCAGGGC...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACATTCCCGTCTCCGACATaGTCCGTTCCCGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTFPSPT*SVPASP
Trigger: AGGAGACGCGGGAACGGAGCATGTCGGAGACGGGAA...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGAAGTGGGTGCAGGGCTaGCAGGGTAAAATGCTGTTA +
Preference number: 4 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRKWVQG*QGKMLL
Trigger: TAACAGCATTTTACCCTGGCAGCCCTGCACCCACTT...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACGCTGCTGCCACTGCTaGTTCCACTGGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGRCCHC*FHWGLW
Trigger: CCACAGGCCCCAGTGGAAGCAGCAGTGGCAGCAGCG...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAGGGCTCCCAGCGGCCTaGCTCCCCATCCCCCTTAGG +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQGLPAA*LPIPLR
Trigger: CCTAAGGGGGATGGGGAGGCAGGCCGCTGGGAGCCC...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGCAGGTTCCACACAAGTaGAGACAGCCGTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWQVPHK*RQPCPP
Trigger: TGGTGGGCACGGCTGTCTGCACTTGTGTGGAACCTG...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGGGGTGGGCCTTGAAGTaGGCCTCTTTCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWGWALK*ASFTWK
Trigger: CTTCCAGGTGAAAGAGGCCCACTTCAAGGCCCACCC...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACAAGCTGGGCTCAGGGGTaGTACCAGGCCACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTSWAQG*YQATRC
Trigger: ACACCTAGTGGCCTGGTACCACCCCTGAGCCCAGCT...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACATCCCGGCATTGTAGCTaGGCTCAGGGGTGGTACCAG +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTSRHCS*AQGWYQ
Trigger: CTGGTACCACCCCTGAGCCCAGCTACAATGCCGGGA...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACACAGGCAGGAGGCAACTaGGGACTAGGCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTQAGGN*GLGTGD
Trigger: GTCACCTGTGCCTAGTCCCCAGTTGCCTCCTGCCTG...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACAAGTGGCAGAGGCTGGTaGGCCCTTGGGCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTSGRGW*ALGQNG
Trigger: ACCATTCTGCCCAAGGGCCCACCAGCCTCTGCCACT...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000164820.2
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAGAGGCCAGGTCTCTGTaGGGGGTGGGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQEARSL*GVGELG
Trigger: CCCCAGCTCCCCCACCCCCCACAGAGACCTGGCCTC...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACAGGGCAGCACCTCCTCTaGTCTAAACTCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTGQHLL*SKLRQL
Trigger: GAGCTGCCGGAGTTTAGACCAGAGGAGGTGCTGCCC...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAACTCGTTCCTTGCACTTaGGATCAATGTCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQLVPCT*DQCRWC
Trigger: GCACCACCGACATTGATCTCAAGTGCAAGGAACGAG...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAACCAGGGGCAGTGGCTaGCCAGCCCCTCCACCTCGA +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQTRGSG*PAPPPR
Trigger: TCGAGGTGGAGGGGCTGGTCAGCCACTGCCCCTGGT...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAGGGACTAGGCACAGGTaGCACGCCCACCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQGTRHR*HAHLAR
Trigger: CCTGGCCAGGTGGGCGTGTCACCTGTGCCTAGTCCC...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACCTAGGGCACCTGGCTaGAGGATGCCCAGGGGTACT +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGPRAPG*RMPRGT
Trigger: AGTACCCCTGGGCATCCTGCAGCCAGGTGCCCTAGG...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAACCCGGGCTGCCACACTaGTGGCCTCACTGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQPGLPH*WPHCPS
Trigger: CGAGGGACAGTGAGGCCAGCAGTGTGGCAGCCCGGG...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGATGGTGTCAGCACGCCTaGCTTAGGGGTGCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGWCQHA*LRGAGA
Trigger: AGCGCCAGCACCCCTAAGGCAGGCGTGCTGACACCA...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAACATTTCCAATCTGGGTaGGCCTTGAAGTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQHFQSG*ALKWAS
Trigger: AGAGGCCCACTTCAAGGCCCACCCAGATTGGAAATG...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTCCAGTGAAAAGGAGGTaGAGACTGAGACTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSPVKRR*RLRLRW
Trigger: CCACCTCAGTCTCAGTCTCCACCTCCTTTTCACTGG...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAGCAGTGGGTGCAGTaGCAGCCAGGACCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGQQWVQ*QPGPCR
Trigger: ACGGCAAGGTCCTGGCTGCCACTGCACCCACTGCTG...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTCAGGTGGAGTGGTACTaGTGGCTACAGTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSQVEWY*WLQCRP
Trigger: TGGTCTACACTGTAGCCACCAGTACCACTCCACCTG...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAGGCAGTGGCAGAGGCTaGTGGGCCCTTGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGGSGRG*WALGQN
Trigger: ATTCTGCCCAAGGGCCCACCAGCCTCTGCCACTGCC...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000164820.2
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTGCTGCCTTTACTTTCTaGGGAGCTTTTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSAAFTF*GAFGLG
Trigger: ACCCAGCCCAAAAGCTCCCCAGAAAGTAAAGGCAGC...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACAGGTCTTCTTCAGGGGTaGGGGCCGCACCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTGLLQG*GPHLHL
Trigger: AAGATGAAGGTGCGGCCCCCACCCCTGAAGAAGACC...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCTGAGTCTAGGTCCGTaGAATTCTTCCTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCLSLGP*NSSSSF
Trigger: GAAAGAAGAGGAAGAATTCCACGGACCTAGACTCAG...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAGGGACTTGCTGCCACTaGCGGAACCTGCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGGTCCH*RNLQGQ
Trigger: CTGGCCTTGCAGGTTCCGCCAGTGGCAGCAAGTCCC...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTTCTTGTACTTCTGCTaGGCGGCTGTCAATGGCGTG +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSFLYFC*AAVNGV
Trigger: CACGCCATTGACAGCCGCCCAGCAGAAGTACAAGAA...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAACACCCCAGGGGGCACTaGGGTCTCACGGCAACTCCG +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQHPRGH*GLTATP
Trigger: CGGAGTTGCCGTGAGACCCCAGTGCCCCCTGGGGTG...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGATGGGAGGGCAGAGGGTaGGGAGAATCCTCCCCATGC +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGWEGRG*GESSPC
Trigger: GCATGGGGAGGATTCTCCCCACCCTCTGCCCTCCCA...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000164820.2
CDS-3UTR TCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACCCAGTACTTGCTCCTaGGCCTGCAGGGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGPSTCS*ACRGCT
Trigger: AGTGCAACCCCTGCAGGCTCAGGAGCAAGTACTGGG...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGCAGCAGTGCGTTGGATaGCAGGTGAGGCATTTATGG +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWQQCVG*QVRHLW
Trigger: CCATAAATGCCTCACCTGTCATCCAACGCACTGCTG...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAATGGGCCTCACTAGGCTaGACAGAGGGGTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQWASLG*TEGSGW
Trigger: CCAGCCCGACCCCTCTGTGCAGCCTAGTGAGGCCCA...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAGCACCCGGGATCCTGTaGCCATTTCAGTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGAPGIL*PFQSWH
Trigger: GTGCCAGGACTGAAATGGGCACAGGATCCCGGGTGC...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAACTGCCCTCCCACTACTaGCCTCGCTGCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQLPSHY*PRCCHC
Trigger: GCAGTGGCAGCAGCGAGGGCAGTAGTGGGAGGGCAG...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAGGATGGGAAGATGTCTaGGTAGCGGGCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGGWEDV*VAGLEG
Trigger: GCCTTCCAGGCCCGCTACGCAGACATCTTCCCATCC...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAGTGGGAGTGGCTGCCTaGATGATCTTCTGGCGGACC +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGVGVAA*MIFWRT
Trigger: GGTCCGCCAGAAGATCATGCAGGCAGCCACTCCCAC...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAACAGGGGCCACTCCCTaGAACCTTGGTGTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGTGATP*NLGVRA
Trigger: AGCTCGGACACCAAGGTTCCAGGGAGTGGCCCCTGT...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAAGGACTAGTAGGGGCTaGAGTGGCAGTGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGRTSRG*SGSGRG
Trigger: GCCTCTGCCACTGCCACTCCAGCCCCTACTAGTCCT...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000164820.2
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTACCCCACAGGAATGCTaGCAATGGCTGCCTTTACTT +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSTPQEC*QWLPLL
Trigger: AAGTAAAGGCAGCCATTGCCAGCATTCCTGTGGGGT...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAATGCACACCCAAGTCCTaGCTACGGCGCACCTGGCGC +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQCTPKS*LRRTWR
Trigger: GCGCCAGGTGCGCCGTAGCCAGGACTTGGGTGTGCA...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTCGAACAGCAGTGCGTTaGATGACAGGTGAGGCATTT +
Preference number: 4 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSRTAVR*MTGEAF
Trigger: AAATGCCTCACCTGTCATCCAACGCACTGCTGTTCG...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACACCTCTCCAGGGAATTTaGAAGGCAGTGGCACATCGG +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTPLQGI*KAVAHR
Trigger: CCGATGTGCCACTGCCTTCCAAATTCCCTGGAGAGG...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACAAAGTACAACCCAAGTTaGGAGGGCAGAGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTKYNPS*EGRGWG
Trigger: TCCCCACCCTCTGCCCTCCCAACTTGGGTTGTACTT...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164820.2
CDS-3UTR TCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGAGTGTGCCCACCTGCTaGCTGTACATAGGTGATTCT +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWSVPTC*LYIGDS
Trigger: AGAATCACCTATGTACAGTCAGCAGGTGGGCACACT...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAACCCACTGGGAGGTGCTaGAATGACAGAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQPTGRC*NDRGAW
Trigger: CCAGGCCCCTCTGTCATTGCAGCACCTCCCAGTGGG...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAACCTAGGGCACCTGGCTaGAGGATGCCCAGGGGTACT +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQPRAPG*RMPRGT
Trigger: AGTACCCCTGGGCATCCTGCAGCCAGGTGCCCTAGG...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACACATTTCCAATCTGGGTaGGCCTTGAAGTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTHFQSG*ALKWAS
Trigger: AGAGGCCCACTTCAAGGCCCACCCAGATTGGAAATG...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAATGTTGGGCACCATTTTaGACAGGTACTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LGMGTMVGGITFLESTTQCWAPF*TGTEKG
Trigger: GCCTTTCTCAGTACCTGTCCAAAATGGTGCCCAACA...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAAGTGTAGACCAGGCTTaGCGGAGCTTGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGSVDQA*RSLGRW
Trigger: CCACCTTCCCAAGCTCCGCCAAGCCTGGTCTACACT...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000164820.2
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAAGTGGCGGGGCAACTTaGGCAGTGCCAGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQSGGAT*AVPESE
Trigger: CTCGGACTCTGGCACTGCCCAAGTTGCCCCGCCACT...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGATTTTGGACAGGTACTaGGAAAGGCGAGCTAACCAG +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWILDRY*ERRANQ
Trigger: CTGGTTAGCTCGCCTTTCTCAGTACCTGTCCAAAAT...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGCTGACTGTACATAGGTaGTTCTTGTGGAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWLTVHR*FLWKRA
Trigger: TGCCCTCTTCCACAAGAATCACCTATGTACAGTCAG...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACAGGTAAAATGCTGTTATaGCAGGACCTCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTGKMLL*QDLQRL
Trigger: CAGCCTCTGGAGGTCCTGTCATAACAGCATTTTACC...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACAGGTTGCTACCAAAGCTaGTGTTGGAGACCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTGCYQS*CWRPQH
Trigger: ATGCTGAGGTCTCCAACATCAGCTTTGGTAGCAACC...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACCTAGAGGCAGAGTGTaGCCACCTGCTGACTGTACA +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGPRGRV*PPADCT
Trigger: TGTACAGTCAGCAGGTGGGCACACTCTGCCTCTAGG...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAATTTCTGCTTCTCTTTaGGCCCCAGGGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGISASL*APGRTT
Trigger: GGTGGTACGCCCTGGGGCCCAAAGAGAAGCAGAAAT...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAAGGGTTGGACGGCAATaGGTAAAGGAGGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGRVGRQ*VKEERM
Trigger: CATCCGCTCCTCCTTTACCCATTGCCGTCCAACCCT...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAATCCCGGCATTGTAGCTaGGCTCAGGGGTGGTACCAG +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQSRHCS*AQGWYQ
Trigger: CTGGTACCACCCCTGAGCCCAGCTACAATGCCGGGA...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAACAGGCAGGAGGCAACTaGGGACTAGGCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQQAGGN*GLGTGD
Trigger: GTCACCTGTGCCTAGTCCCCAGTTGCCTCCTGCCTG...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAGTGGAGTGGTACTGGTaGCTACAGTGTAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGVEWYW*LQCRPG
Trigger: GCCTGGTCTACACTGTAGCCACCAGTACCACTCCAC...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000164820.2
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACTTCTTCCTCACAGATaGCCATCCGCTCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGLLPHR*PSAPHH
Trigger: GTGATGAGGAGCGGATGGTCATCTGTGAGGAAGAAG...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGATCCTTCACCAGGAGCTaGAAAAGATCCTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGSFTRS*KRSWST
Trigger: GGTGCTCCAGGATCTTTTGCAGCTCCTGGTGAAGGA...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAAACGTCTCCTCATCTTaGGCTTGGGTGAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGNVSSS*AWVRWD
Trigger: ATCCCACCTCACCCAAGCGCAAGATGAGGAGACGTT...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGTCTCGGATCTTTAATTaGAGACACACCTTGGATGGG +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWSRIFN*RHTLDG
Trigger: CCCATCCAAGGTGTGTCTGCAATTAAAGATCCGAGA...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAATACCAAATGTGGAGCTaGCGAGGTGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQYQMWS*RGGCCC
Trigger: GCAGCAGCAGCCACCTCGCCAGCTCCACATTTGGTA...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAGGTGGAGTGGTACTaGTGGCTACAGTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGQVEWY*WLQCRP
Trigger: TGGTCTACACTGTAGCCACCAGTACCACTCCACCTG...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000164820.2
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAGGTCTTCTTCAGGGGTaGGGGCCGCACCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQGLLQG*GPHLHL
Trigger: AAGATGAAGGTGCGGCCCCCACCCCTGAAGAAGACC...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGCTGAGTCTAGGTCCGTaGAATTCTTCCTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWLSLGP*NSSSSF
Trigger: GAAAGAAGAGGAAGAATTCCACGGACCTAGACTCAG...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACATCTTTCGGTCCTTGTTaGACCATTTCCAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: TALISVIAASRHSKKYCTSFGPC*TISNLG
Trigger: ACCCAGATTGGAAATGGTGCAACAAGGACCGAAAGA...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAATTTCTGCTTCTCTTTaGGCCCCAGGGCGTACCACC +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQISASL*APGRTT
Trigger: GGTGGTACGCCCTGGGGCCCAAAGAGAAGCAGAAAT...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR TCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAATTTTGGACAGGTACTaGGAAAGGCGAGCTAACCAG +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGILDRY*ERRANQ
Trigger: CTGGTTAGCTCGCCTTTCTCAGTACCTGTCCAAAAT...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAATCCTTCACCAGGAGCTaGAAAAGATCCTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQSFTRS*KRSWST
Trigger: GGTGCTCCAGGATCTTTTGCAGCTCCTGGTGAAGGA...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAGTGCCTTCCCCACAGTaGCCAATAAAGGTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQVPSPQ*PIKVQL
Trigger: TAGCTGGACCTTTATTGGGCACTGTGGGGAAGGCAC...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGATGCCCATTTCAGTCCTaGCACCTGCTATGTCATTTG +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGCPFQS*HLLCHL
Trigger: CAAATGACATAGCAGGTGCCAGGACTGAAATGGGCA...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAATTGCAGACACACCTTaGATGGGAAGATGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGIADTP*MGRCLR
Trigger: ACGCAGACATCTTCCCATCCAAGGTGTGTCTGCAAT...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR GCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAAATGCTGGCAATGGCTaGCTTTACTTTCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQNAGNG*LYFLGS
Trigger: GCTCCCCAGAAAGTAAAGGCAGCCATTGCCAGCATT...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAATGAGTCTCGTTCCTTaGGCAAGGCACTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQMSLVP*ARHSET
Trigger: AGTCTCTGAGTGCCTTGCCCAAGGAACGAGACTCAT...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAACCCCACAGGAATGCTaGCAATGGCTGCCTTTACTT +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQTPQEC*QWLPLL
Trigger: AAGTAAAGGCAGCCATTGCCAGCATTCCTGTGGGGT...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CCA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAATGTTGGGCACCATTTTaGACAGGTACTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQCWAPF*TGTEKG
Trigger: GCCTTTCTCAGTACCTGTCCAAAATGGTGCCCAACA...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS GCA 90 bp CTACTGCGGCTGCCACCCTGGCTCCCTTCCTGGCAGGGCGAAGGCTaGTCACTAGGGCGGCCAGGGCCACCAAAGGCTGGGGACTTCGGG +
Preference number: 5 (lower is better)
Translates to: LLRLPPWLPSWQGEG*SLGRPGPPKAGDFG
Trigger: CCCGAAGTCCCCAGCCTTTGGTGGCCCTGGCCGCCCTAGTGAGCAGCCTTCGCCCTGCCAGGAAGGGAGCCAGGGTGGCAGCCGCAGTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 90 bp AGGTGGCGGTGGGTGGGGGCCCAGGTCTGGTGGTGTCAGCACGCCTaGCTTAGGGGTGCTGGCGCTCAGGTGGCGGCTGCGAACAGCAGT +
Preference number: 5 (lower is better)
Translates to: RWRWVGAQVWWCQHA*LRGAGAQVAAANSS
Trigger: ACTGCTGTTCGCAGCCGCCACCTGAGCGCCAGCACCCCTAAGGCAGGCGTGCTGACACCACCAGACCTGGGCCCCCACCCACCGCCACCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp CTCCCCGGCCCCTCGCCGTCTCAAAGCCTTGGCCCTGGTAGCTGGTaGGGACTTGCTGCCACTGGCGGAACCTGCAAGGCCAGGGCATGC +
Preference number: 5 (lower is better)
Translates to: LPGPSPSQSLGPGSW*GLAATGGTCKARAC
Trigger: GCATGCCCTGGCCTTGCAGGTTCCGCCAGTGGCAGCAAGTCCCCACCAGCTACCAGGGCCAAGGCTTTGAGACGGCGAGGGGCCGGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS CCA 90 bp GTGCTCACTGGCCGTGTCAGTAGAGGAGGACCGAGTGGAGGTGGGTaGCCGAGGAGGCACACCCAGGGCACTGGCGTCCTCAGGCGTCCG +
Preference number: 5 (lower is better)
Translates to: VLTGRVSRGGPSGGG*PRRHTQGTGVLRRP
Trigger: CGGACGCCTGAGGACGCCAGTGCCCTGGGTGTGCCTCCTCGGCCACCCACCTCCACTCGGTCCTCCTCTACTGACACGGCCAGTGAGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp CGGTCCCCAGGGAACTGCACACCCAAGTCCTGGCTACGGCGCACCTaGCGCACGACTGCAGGCAGGAAGAGGCCATCACCACGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: RSPGNCTPKSWLRRT*RTTAGRKRPSPRRA
Trigger: GGCTCGGCGTGGTGATGGCCTCTTCCTGCCTGCAGTCGTGCGCCAGGTGCGCCGTAGCCAGGACTTGGGTGTGCAGTTCCCTGGGGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 90 bp GAACTGCACACCCAAGTCCTGGCTACGGCGCACCTGGCGCACGACTaGAGGCAGGAAGAGGCCATCACCACGCCGAGCCAGCACCCGCTG +
Preference number: 5 (lower is better)
Translates to: ELHTQVLATAHLAHD*RQEEAITTPSQHPL
Trigger: CAGCGGGTGCTGGCTCGGCGTGGTGATGGCCTCTTCCTGCCTGCAGTCGTGCGCCAGGTGCGCCGTAGCCAGGACTTGGGTGTGCAGTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 90 bp GGGCTGCTGGTGCAGCTCCCTTCTCCAGTGAGGCCACACTGCTACTaGGGCTGCCACCCTGGCTCCCTTCCTGGCAGGGCGAAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GLLVQLPSPVRPHCY*GCHPGSLPGRAKAA
Trigger: AGCAGCCTTCGCCCTGCCAGGAAGGGAGCCAGGGTGGCAGCCGCAGTAGCAGTGTGGCCTCACTGGAGAAGGGAGCTGCACCAGCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 90 bp GAGCACGGGCTGCTGGTGCAGCTCCCTTCTCCAGTGAGGCCACACTaGTACTGCGGCTGCCACCCTGGCTCCCTTCCTGGCAGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: EHGLLVQLPSPVRPH*YCGCHPGSLPGRAK
Trigger: CTTCGCCCTGCCAGGAAGGGAGCCAGGGTGGCAGCCGCAGTAGCAGTGTGGCCTCACTGGAGAAGGGAGCTGCACCAGCAGCCCGTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 90 bp CACGGCAACTCCGTCCAGGTCCCCCGGCCCGTGCCTCACCGGCAGTaGCCACCTCTCCAGGGAATTTGGAAGGCAGTGGCACATCGGGGT +
Preference number: 5 (lower is better)
Translates to: HGNSVQVPRPVPHRQ*PPLQGIWKAVAHRG
Trigger: ACCCCGATGTGCCACTGCCTTCCAAATTCCCTGGAGAGGTGGGCACTGCCGGTGAGGCACGGGCCGGGGGACCTGGACGGAGTTGCCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp GCTCCCTTCTCCAGTGAGGCCACACTGCTACTGCGGCTGCCACCCTaGCTCCCTTCCTGGCAGGGCGAAGGCTGCTCACTAGGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: APFSSEATLLLRLPP*LPSWQGEGCSLGRP
Trigger: TGGCCGCCCTAGTGAGCAGCCTTCGCCCTGCCAGGAAGGGAGCCAGGGTGGCAGCCGCAGTAGCAGTGTGGCCTCACTGGAGAAGGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp GGTGAAAGGCCACGGGCTGGAAGGGTGAAGAAGCCAGGCCCAAGGTaGGCATCGGCTGGGCCACAGCAGTCGGTGCGGCTGGAGGCACAG +
Preference number: 5 (lower is better)
Translates to: GERPRAGRVKKPGPR*ASAGPQQSVRLEAQ
Trigger: CTGTGCCTCCAGCCGCACCGACTGCTGTGGCCCAGCCGATGCCCACCTTGGGCCTGGCTTCTTCACCCTTCCAGCCCGTGGCCTTTCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 90 bp GGGCTCCACGGAAGAAGGACAAGGAGGCAAAGCGGGCCCAGGCTCTaGCTGCTCCTCCTCTGGGCCTGCAGGGTGCTTCCTCAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: GLHGRRTRRQSGPRL*LLLLWACRVLPQQG
Trigger: GCCTTGCTGAGGAAGCACCCTGCAGGCCCAGAGGAGGAGCAGGCAGAGCCTGGGCCCGCTTTGCCTCCTTGTCCTTCTTCCGTGGAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 90 bp CGAAGTCTCATCGCCCCAGTCAAACTCAGTGCTTCCTTCCCGGGCTaGCACACCCGCAGGCCGCCCAGTCCCACCTGGCCCACTGTCTGC +
Preference number: 5 (lower is better)
Translates to: RSLIAPVKLSASFPG*HTRRPPSPTWPTVC
Trigger: GCAGACAGTGGGCCAGGTGGGACTGGGCGGCCTGCGGGTGTGGCAGCCCGGGAAGGAAGCACTGAGTTTGACTGGGGCGATGAGACTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp GCCCAGTCCCACCTGGCCCACTGTCTGCCAGGCCCTCCATCTCTTTaGTTCTCATGGACAAGTGGCGCGAGCAGTACCCGCGCCGCTGGG +
Preference number: 5 (lower is better)
Translates to: AQSHLAHCLPGPPSL*FSWTSGASSTRAAG
Trigger: CCCAGCGGCGCGGGTACTGCTCGCGCCACTTGTCCATGAGAACCAAAGAGATGGAGGGCCTGGCAGACAGTGGGCCAGGTGGGACTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp ACGGGCTGGAAGGGTGAAGAAGCCAGGCCCAAGGTGGGCATCGGCTaGGCCACAGCAGTCGGTGCGGCTGGAGGCACAGTGATGGGCACA +
Preference number: 5 (lower is better)
Translates to: TGWKGEEARPKVGIG*ATAVGAAGGTVMGT
Trigger: TGTGCCCATCACTGTGCCTCCAGCCGCACCGACTGCTGTGGCCCAGCCGATGCCCACCTTGGGCCTGGCTTCTTCACCCTTCCAGCCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AGGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGGACCAGGGCCCGCCGTaGGTCCAGGGTGCGCCGCAG +
Preference number: 5 (lower is better)
Translates to: REQATFRAELERTNGFLGDQGPP*VQGAPQ
Trigger: CTGCGGCGCACCCTGGACCAACGGCGGGCCCTGGTC...CCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS GCA 90 bp TGGCCTCACTGTCCCTCGAAGTCTCATCGCCCCAGTCAAACTCAGTaGTTCCTTCCCGGGCTGCCACACCCGCAGGCCGCCCAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: WPHCPSKSHRPSQTQ*FLPGLPHPQAAQSH
Trigger: GTGGGACTGGGCGGCCTGCGGGTGTGGCAGCCCGGGAAGGAAGCACTGAGTTTGACTGGGGCGATGAGACTTCGAGGGACAGTGAGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 90 bp CAGGCGCCACTAGACGTGGGCGGGAGTCTCCCCGGGCTGCCACACTaGTGGCCTCACTGTCCCTCGAAGTCTCATCGCCCCAGTCAAACT +
Preference number: 5 (lower is better)
Translates to: QAPLDVGGSLPGLPH*WPHCPSKSHRPSQT
Trigger: AGTTTGACTGGGGCGATGAGACTTCGAGGGACAGTGAGGCCAGCAGTGTGGCAGCCCGGGGAGACTCCCGCCCACGTCTAGTGGCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 90 bp GGCAGTGGCACATCGGGGTTGCGGACAATGACAGGTGAGTCCCGCTaGACGGCGGGTACCCTTCGCACAGAGGGCCCTGGATCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: GSGTSGLRTMTGESR*TAGTLRTEGPGSEV
Trigger: CACCTCAGATCCAGGGCCCTCTGTGCGAAGGGTACCCGCCGTGCAGCGGGACTCACCTGTCATTGTCCGCAACCCCGATGTGCCACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp CAGGCAGGAGGCAACTGGGGACTAGGCACAGGTGACACGCCCACCTaGCCAGGAGCCAGCAAAGGAGCTTGGCCTGCTGAGAGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: QAGGNWGLGTGDTPT*PGASKGAWPAESRG
Trigger: GCCTCTGCTCTCAGCAGGCCAAGCTCCTTTGCTGGCTCCTGGCCAGGTGGGCGTGTCACCTGTGCCTAGTCCCCAGTTGCCTCCTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000005578.13
ENSMUST00000165239.3
CDS CCA 90 bp CTCTTCCTCACCCTCTTCAGCCTCTTCTGGCCCTGCCTGCTCCTGTaGCTGTGCCTCCTCCTCCTCCTCTGGCTTGTCACCCTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: LFLTLFSLFWPCLLL*LCLLLLLWLVTLPG
Trigger: GCCGGGGAGGGTGACAAGCCAGAGGAGGAGGAGGAGGCACAGCCACAGGAGCAGGCAGGGCCAGAAGAGGCTGAAGAGGGTGAGGAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS CCA 90 bp GCGCCACTAGACGTGGGCGGGAGTCTCCCCGGGCTGCCACACTGCTaGCCTCACTGTCCCTCGAAGTCTCATCGCCCCAGTCAAACTCAG +
Preference number: 5 (lower is better)
Translates to: APLDVGGSLPGLPHC*PHCPSKSHRPSQTQ
Trigger: CTGAGTTTGACTGGGGCGATGAGACTTCGAGGGACAGTGAGGCCAGCAGTGTGGCAGCCCGGGGAGACTCCCGCCCACGTCTAGTGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp GTGTGTGGGACACGGAGTCCACTCCAGAGTCTAAGCTGTCACTCTTaGGGAAGTCTGGGGCGGCTCCCCCACCTCCTGCTCCGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: VCGTRSPLQSLSCHS*GSLGRLPHLLLRRP
Trigger: GGGCCTCCGGAGCAGGAGGTGGGGGAGCCGCCCCAGACTTCCCCAAGAGTGACAGCTTAGACTCTGGAGTGGACTCCGTGTCCCACACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 90 bp TCCAGAGGCTGTACAGGCAGGAGGCAACTGGGGACTAGGCACAGGTaGCACGCCCACCTGGCCAGGAGCCAGCAAAGGAGCTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SRGCTGRRQLGTRHR*HAHLARSQQRSLAC
Trigger: GCAGGCCAAGCTCCTTTGCTGGCTCCTGGCCAGGTGGGCGTGTCACCTGTGCCTAGTCCCCAGTTGCCTCCTGCCTGTACAGCCTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000005578.13
ENSMUST00000165239.3
CDS GCA 90 bp CCACGTCGCCCTTCTTGTACTTCTGCTGGGCGGCTGTCAATGGCGTaGGAGCACGGGCTGCTGGTGCAGCTCCCTTCTCCAGTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: PRRPSCTSAGRLSMA*EHGLLVQLPSPVRP
Trigger: TGGCCTCACTGGAGAAGGGAGCTGCACCAGCAGCCCGTGCTCGCACGCCATTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGACGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 90 bp CGGATGCCATTGGGCGTGCAGACCACGTCGCCCTTCTTGTACTTCTaGTGGGCGGCTGTCAATGGCGTGCGAGCACGGGCTGCTGGTGCA +
Preference number: 5 (lower is better)
Translates to: RMPLGVQTTSPFLYF*WAAVNGVRARAAGA
Trigger: TGCACCAGCAGCCCGTGCTCGCACGCCATTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGACGTGGTCTGCACGCCCAATGGCATCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp CAGGCAGGAGGCAACTGGGGACTAGGCACAGGTGACACGCCCACCTaGCCAGGAGCCAGCAAAGGAGCTTGGCCTGAGAGCAGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: QAGGNWGLGTGDTPT*PGASKGAWPESRGC
Trigger: ACAGCCTCTGCTCTCAGGCCAAGCTCCTTTGCTGGCTCCTGGCCAGGTGGGCGTGTCACCTGTGCCTAGTCCCCAGTTGCCTCCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS CCA 90 bp TCTTTGGTTCTCATGGACAAGTGGCGCGAGCAGTACCCGCGCCGCTaGGACTCCTTCATGCAGCCATCCCGAGAGCACAGCCGGCGCCAC +
Preference number: 5 (lower is better)
Translates to: SLVLMDKWREQYPRR*DSFMQPSREHSRRH
Trigger: GTGGCGCCGGCTGTGCTCTCGGGATGGCTGCATGAAGGAGTCCCAGCGGCGCGGGTACTGCTCGCGCCACTTGTCCATGAGAACCAAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATACGTTCCCGCGTCTCCTaGTGCCCTCCTGCCAGACCC +
Preference number: 5 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIRSRVS*CPPARP
Trigger: GGGTCTGGCAGGAGGGCACAAGGAGACGCGGGAACG...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCGACCAGGGCCCGCCGTaGGTCCAGGGTGCGCCGCAG +
Preference number: 5 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGDQGPP*VQGAPQ
Trigger: CTGCGGCGCACCCTGGACCAACGGCGGGCCCTGGTC...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS TCA 90 bp GAATTTGGAAGGCAGTGGCACATCGGGGTTGCGGACAATGACAGGTaGGTCCCGCTGCACGGCGGGTACCCTTCGCACAGAGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: EFGRQWHIGVADNDR*VPLHGGYPSHRGPW
Trigger: CCAGGGCCCTCTGTGCGAAGGGTACCCGCCGTGCAGCGGGACTCACCTGTCATTGTCCGCAACCCCGATGTGCCACTGCCTTCCAAATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp ATGCCATTGGGCGTGCAGACCACGTCGCCCTTCTTGTACTTCTGCTaGGCGGCTGTCAATGGCGTGCGAGCACGGGCTGCTGGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: MPLGVQTTSPFLYFC*AAVNGVRARAAGAA
Trigger: AGCTGCACCAGCAGCCCGTGCTCGCACGCCATTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGACGTGGTCTGCACGCCCAATGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCCTGAGCCTGCAGGGGTaGCACTGCCTGGGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGLSLQG*HCLGLP
Trigger: AGGGAGCCCCAGGCAGTGCAACCCCTGCAGGCTCAG...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTGGCCACTCCCAGTACTaGCTCCTGAGCCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGGHSQY*LLSLQG
Trigger: CCCCTGCAGGCTCAGGAGCAAGTACTGGGAGTGGCC...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS TCA 90 bp CTCCAGGGAATTTGGAAGGCAGTGGCACATCGGGGTTGCGGACAATaGCAGGTGAGTCCCGCTGCACGGCGGGTACCCTTCGCACAGAGG +
Preference number: 5 (lower is better)
Translates to: LQGIWKAVAHRGCGQ*QVSPAARRVPFAQR
Trigger: CCTCTGTGCGAAGGGTACCCGCCGTGCAGCGGGACTCACCTGTCATTGTCCGCAACCCCGATGTGCCACTGCCTTCCAAATTCCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp GTAGGTCATGGAGCCTGTGGCGCTAGGGAAAGGACTAGTAGGGGCTaGAGTGGCAGTGGCAGAGGCTGGTGGGCCCTTGGGCAGAATGGT +
Preference number: 5 (lower is better)
Translates to: VGHGACGARERTSRG*SGSGRGWWALGQNG
Trigger: ACCATTCTGCCCAAGGGCCCACCAGCCTCTGCCACTGCCACTCCAGCCCCTACTAGTCCTTTCCCTAGCGCCACAGGCTCCATGACCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS CCA 90 bp TCTGGTGGTGTCAGCACGCCTGCCTTAGGGGTGCTGGCGCTCAGGTaGCGGCTGCGAACAGCAGTGCGTTGGATGACAGGTGAGGCATTT +
Preference number: 5 (lower is better)
Translates to: SGGVSTPALGVLALR*RLRTAVRWMTGEAF
Trigger: AAATGCCTCACCTGTCATCCAACGCACTGCTGTTCGCAGCCGCCACCTGAGCGCCAGCACCCCTAAGGCAGGCGTGCTGACACCACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp GGTGACACAGCTCGGAAGCCAGCCGGTGTGGAGGGGGTAGGTGTGTaGGACACGGAGTCCACTCCAGAGTCTAAGCTGTCACTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: GDTARKPAGVEGVGV*DTESTPESKLSLLG
Trigger: CCCCAAGAGTGACAGCTTAGACTCTGGAGTGGACTCCGTGTCCCACACACCTACCCCCTCCACACCGGCTGGCTTCCGAGCTGTGTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp AATCCTCCCCATGCCTGTGGCGCTAGGGAAAGGACTAGTAGGGGCTaGAGTGGCAGTGGCAGAGGCTGGTGGGCCCTTGGGCAGAATGGT +
Preference number: 5 (lower is better)
Translates to: NPPHACGARERTSRG*SGSGRGWWALGQNG
Trigger: ACCATTCTGCCCAAGGGCCCACCAGCCTCTGCCACTGCCACTCCAGCCCCTACTAGTCCTTTCCCTAGCGCCACAGGCATGGGGAGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164820.2
CDS-3UTR CAA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTCGTTCCCGCGTCTCCTaGTGCCCTCCTGCCAGACCC +
Preference number: 5 (lower is better)
Translates to: APNWKGQMASWGGGNYPTRSRVS*CPPARP
Trigger: GGGTCTGGCAGGAGGGCACAAGGAGACGCGGGAACG...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACCGTTCCCGCGTCTCCTaGTGCCCTCCTGCCAGACCC +
Preference number: 5 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYRSRVS*CPPARP
Trigger: GGGTCTGGCAGGAGGGCACAAGGAGACGCGGGAACG...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACCTGAGCCTGCAGGGGTaGCACTGCCTGGGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYLSLQG*HCLGLP
Trigger: AGGGAGCCCCAGGCAGTGCAACCCCTGCAGGCTCAG...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGTGATTCCCCCAGCCTaGCCTAGGGCACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGVIPPA*PRAPGC
Trigger: GCAGCCAGGTGCCCTAGGCAAGGCTGGGGGAATCAC...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTGGCAGCCAGGACCTaGCCGTTGGTCGAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: APNWKGQMASWGGGNYPTVAART*PLVEVP
Trigger: GGGCACCTCGACCAACGGCAAGGTCCTGGCTGCCAC...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTCAGTGGCGGGGCAACTaGGGCAGTGCCAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSQWRGN*GSARVR
Trigger: TCGGACTCTGGCACTGCCCAAGTTGCCCCGCCACTG...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS TCA 90 bp TCTCCTCCCCCTCCTCGCAGCGAGTCCCCAGGTTGCTACCAAAGCTaGTGTTGGAGACCTCAGCATCCTCAGGTTGCTTGGGCTCCACGG +
Preference number: 5 (lower is better)
Translates to: SPPPPRSESPGCYQS*CWRPQHPQVAWAPR
Trigger: CCGTGGAGCCCAAGCAACCTGAGGATGCTGAGGTCTCCAACATCAGCTTTGGTAGCAACCTGGGGACTCGCTGCGAGGAGGGGGAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 90 bp TCATGCAGCCATCCCGAGAGCACAGCCGGCGCCACTGCTTGCCATTaGACTTCTTTCGGATGCCATTGGGCGTGCAGACCACGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: SCSHPESTAGATACH*TSFGCHWACRPRRP
Trigger: AGGGCGACGTGGTCTGCACGCCCAATGGCATCCGAAAGAAGTTCAATGGCAAGCAGTGGCGCCGGCTGTGCTCTCGGGATGGCTGCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp TTAGGGGTGCTGGCGCTCAGGTGGCGGCTGCGAACAGCAGTGCGTTaGATGACAGGTGAGGCATTTATGGGGCTGAAATTGGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: LGVLALRWRLRTAVR*MTGEAFMGLKLAGR
Trigger: CCGCCCTGCCAATTTCAGCCCCATAAATGCCTCACCTGTCATCCAACGCACTGCTGTTCGCAGCCGCCACCTGAGCGCCAGCACCCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGGCCACTCCCAGTACTaGCTCCTGAGCCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: EGICPCCPQHREGIYIQGGHSQY*LLSLQG
Trigger: CCCCTGCAGGCTCAGGAGCAAGTACTGGGAGTGGCC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGTGGCAGCCAGGACCTaGCCGTTGGTCGAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTVAART*PLVEVP
Trigger: GGGCACCTCGACCAACGGCAAGGTCCTGGCTGCCAC...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCGTGGCAGCCAGGACCTaGCCGTTGGTCGAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPVAART*PLVEVP
Trigger: GGGCACCTCGACCAACGGCAAGGTCCTGGCTGCCAC...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACATCCTCCTCCTCTGGCTaGTCACCCTCCCCGGCCCCT +
Preference number: 5 (lower is better)
Translates to: SGGYLPLLPPAQGGNIYTSSSSG*SPSPAP
Trigger: AGGGGCCGGGGAGGGTGACAAGCCAGAGGAGGAGGA...TGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 90 bp GGCGCTCAGGTGGCGGCTGCGAACAGCAGTGCGTTGGATGACAGGTaGGGCATTTATGGGGCTGAAATTGGCAGGGCGGAAGCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: GAQVAAANSSALDDR*GIYGAEIGRAEAKE
Trigger: CTCTTTGGCTTCCGCCCTGCCAATTTCAGCCCCATAAATGCCTCACCTGTCATCCAACGCACTGCTGTTCGCAGCCGCCACCTGAGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 90 bp TGGGACTCCTTCATGCAGCCATCCCGAGAGCACAGCCGGCGCCACTaGTTGCCATTGAACTTCTTTCGGATGCCATTGGGCGTGCAGACC +
Preference number: 5 (lower is better)
Translates to: WDSFMQPSREHSRRH*LPLNFFRMPLGVQT
Trigger: GGTCTGCACGCCCAATGGCATCCGAAAGAAGTTCAATGGCAAGCAGTGGCGCCGGCTGTGCTCTCGGGATGGCTGCATGAAGGAGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGGAAACCGAGTGGCCTaGGAAGGTGTTGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: EGICPCCPQHREGIYIQGGNRVA*EGVAGP
Trigger: GGGCCCAGCAACACCTTCCAAGGCCACTCGGTTTCC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCTGAGCCTGCAGGGGTaGCACTGCCTGGGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCLSLQG*HCLGLP
Trigger: AGGGAGCCCCAGGCAGTGCAACCCCTGCAGGCTCAG...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCGGCCACTCCCAGTACTaGCTCCTGAGCCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPGHSQY*LLSLQG
Trigger: CCCCTGCAGGCTCAGGAGCAAGTACTGGGAGTGGCC...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCGTGATTCCCCCAGCCTaGCCTAGGGCACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGVIPPA*PRAPGC
Trigger: GCAGCCAGGTGCCCTAGGCAAGGCTGGGGGAATCAC...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTCAGTGTAGACCAGGCTaGGCGGAGCTTGGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSQCRPG*AELGKV
Trigger: CACCTTCCCAAGCTCCGCCAAGCCTGGTCTACACTG...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGAGGCTGGTGGGCCCTaGGGCAGAATGGTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: APNWKGQMASWGGGNYPTEAGGP*GRMVAA
Trigger: TGCTGCTACCATTCTGCCCAAGGGCCCACCAGCCTC...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACGTAGCTGGTGGGGACTaGCTGCCACTGGCGGAACCT +
Preference number: 5 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYVAGGD*LPLAEP
Trigger: AGGTTCCGCCAGTGGCAGCAAGTCCCCACCAGCTAC...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGCGCCGTCTCAAAGCCTaGGCCCTGGTAGCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: CPQHREGIYIQGNRPHSARRLKA*ALVAGG
Trigger: CCCACCAGCTACCAGGGCCAAGGCTTTGAGACGGCG...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTTCTAAGCTGTCACTCTaGGGGAAGTCTGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGSKLSL*GKSGAA
Trigger: AGCCGCCCCAGACTTCCCCAAGAGTGACAGCTTAGA...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 90 bp GCGAGGTGGCTGCTGCTGCTGACTTCTTATCTGAATACACTAAACTaGCACCCATTGGGGAGCCCCCAGGCACCCGGGATCCTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: ARWLLLLTSYLNTLN*HPLGSPQAPGILCP
Trigger: TGGGCACAGGATCCCGGGTGCCTGGGGGCTCCCCAATGGGTGTCAGTTTAGTGTATTCAGATAAGAAGTCAGCAGCAGCAGCCACCTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CCA 90 bp CTGGGCAATAAACTGAACAGCAGGCGATGCAGGAGCCCCATAGCCTaGGGTGCCTACCAGCAAGTTGGTGACAGTAGCAGGTGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: LGNKLNSRRCRSPIA*GAYQQVGDSSRCLP
Trigger: GGGAAGGCACCTGCTACTGTCACCAACTTGCTGGTAGGCACCCCAGGCTATGGGGCTCCTGCATCGCCTGCTGTTCAGTTTATTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CCA 90 bp CACACAAGTGCAGACAGCCGTGCCCACCATCAGTGCACCTGGAGGTaGTGTGACATCCAAAACAACGTCCACACCACCACCGGGTACTCC +
Preference number: 5 (lower is better)
Translates to: HTSADSRAHHQCTWR*CDIQNNVHTTTGYS
Trigger: GGAGTACCCGGTGGTGGTGTGGACGTTGTTTTGGATGTCACACCACCTCCAGGTGCACTGATGGTGGGCACGGCTGTCTGCACTTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp TTCCTCCGCCCAGGGCTAATGGGCACAGTAAAGGTTAGGTTGGTCTaGAAGGTGGGTAGGATGCCAGAGGAATGGCGCTCACGAGGGGCA +
Preference number: 5 (lower is better)
Translates to: FLRPGLMGTVKVRLV*KVGRMPEEWRSRGA
Trigger: TGCCCCTCGTGAGCGCCATTCCTCTGGCATCCTACCCACCTTCCAGACCAACCTAACCTTTACTGTGCCCATTAGCCCTGGGCGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAGGGGTACTGGCCCATaGGGGCCACTCCCAGTACTT +
Preference number: 5 (lower is better)
Translates to: EGICPCCPQHREGIYIQGRGTGP*GPLPVL
Trigger: AAGTACTGGGAGTGGCCCCAATGGGCCAGTACCCCT...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAGGGGTACTGGCCCATaGGGGCCACTCCCAGTACTT +
Preference number: 5 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYRGTGP*GPLPVL
Trigger: AAGTACTGGGAGTGGCCCCAATGGGCCAGTACCCCT...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATCAGTGTAGACCAGGCTaGGCGGAGCTTGGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PKAHTTLQLAALTGAILHQCRPG*AELGKV
Trigger: CACCTTCCCAAGCTCCGCCAAGCCTGGTCTACACTG...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACCAGTGTAGACCAGGCTaGGCGGAGCTTGGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYQCRPG*AELGKV
Trigger: CACCTTCCCAAGCTCCGCCAAGCCTGGTCTACACTG...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTGAACGTCTCCTCATCTaGCGCTTGGGTGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSERLLI*RLGEVG
Trigger: TCCCACCTCACCCAAGCGCAAGATGAGGAGACGTTC...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGGACCAGGGCCCGCCGTaGGTCCAGGGTGCGCCGCAG +
Preference number: 5 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWDQGPP*VQGAPQ
Trigger: CTGCGGCGCACCCTGGACCAACGGCGGGCCCTGGTC...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGACCACGTCGCCCTTCTaGTACTTCTGCTGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: EGICPCCPQHREGIYIQGTTSPF*YFCWAA
Trigger: AGCCGCCCAGCAGAAGTACAAGAAGGGCGACGTGGT...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTGATGAGTCTCGTTCCTaGGGCAAGGCACTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSDESRS*GKALRD
Trigger: GTCTCTGAGTGCCTTGCCCAAGGAACGAGACTCATC...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATACAGGCCGTACCACATaGGTGACCATGGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: PKAHTTLQLAALTGAILHTGRTT*VTMVAA
Trigger: TGCTGCCACCATGGTCACCAATGTGGTACGGCCTGT...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATACACCTGCTATGTCATTaGAAGATGCCTCAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: ELSGGYLPLLPPAQGGNIHLLCH*KMPQPD
Trigger: GTCGGGCTGAGGCATCTTCAAATGACATAGCAGGTG...TATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGGTGCCTACCAGCAAGTaGGTGACAGTAGCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: EGICPCCPQHREGIYIQGVPTSK*VTVAGA
Trigger: GGCACCTGCTACTGTCACCAACTTGCTGGTAGGCAC...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGAGGGGTACTGGCCCATaGGGGCCACTCCCAGTACTT +
Preference number: 5 (lower is better)
Translates to: CPQHREGIYIQGNRPHSARGTGP*GPLPVL
Trigger: AAGTACTGGGAGTGGCCCCAATGGGCCAGTACCCCT...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCGAGGCTGGTGGGCCCTaGGGCAGAATGGTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCEAGGP*GRMVAA
Trigger: TGCTGCTACCATTCTGCCCAAGGGCCCACCAGCCTC...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGATGAGCTGGGGAATTaGCTGGCAGTCTCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: APNWKGQMASWGGGNYPTDELGN*LAVSGP
Trigger: AGGCCCTGAGACTGCCAGCAAATTCCCCAGCTCATC...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATGAACGTCTCCTCATCTaGCGCTTGGGTGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: PKAHTTLQLAALTGAILHERLLI*RLGEVG
Trigger: TCCCACCTCACCCAAGCGCAAGATGAGGAGACGTTC...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCCCCCAATTCCTGCCATCTCCTGGAGTAGGATCATaGGGCTGCAGCTCTGGATGT +
Preference number: 5 (lower is better)
Translates to: LPGEAVTIPLSGPQFLPSPGVGS*GCSSGC
Trigger: ACATCCAGAGCTGCAGCCCAATGATCCTACTCCAGG...AGATGGCAGGAATTGGGGGCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAAGGGTTCGGGGCCCGAGACTaGAATGTGGCTGTCTTGCGA +
Preference number: 5 (lower is better)
Translates to: EGICPCCPQHREGIYIQGFGARD*NVAVLR
Trigger: TCGCAAGACAGCCACATTCAAGTCTCGGGCCCCGAA...CCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATAGTGGCACATCGGGGTaGCGGACAATGACAGGTGAG +
Preference number: 5 (lower is better)
Translates to: PKAHTTLQLAALTGAILHSGTSG*RTMTGE
Trigger: CTCACCTGTCATTGTCCGCAACCCCGATGTGCCACT...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 90 bp AAGTGCAGACAGCCGTGCCCACCATCAGTGCACCTGGAGGTGGTGTaGCATCCAAAACAACGTCCACACCACCACCGGGTACTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: KCRQPCPPSVHLEVV*HPKQRPHHHRVLLH
Trigger: ATGAAGGAGTACCCGGTGGTGGTGTGGACGTTGTTTTGGATGTCACACCACCTCCAGGTGCACTGATGGTGGGCACGGCTGTCTGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGCAATCTGGGTGGGCCTaGAAGTGGGCCTCTTTCACC +
Preference number: 5 (lower is better)
Translates to: CPQHREGIYIQGNRPHSAQSGWA*KWASFT
Trigger: GGTGAAAGAGGCCCACTTCAAGGCCCACCCAGATTG...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTCATCTGGGTCAGTTCTaGAAGTGCTTGGCTGTCTAC +
Preference number: 5 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGHLGQF*KCLAVY
Trigger: GTAGACAGCCAAGCACTTCAAGAACTGACCCAGATG...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGGGAAACCGAGTGGCCTaGGAAGGTGTTGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRGNRVA*EGVAGP
Trigger: GGGCCCAGCAACACCTTCCAAGGCCACTCGGTTTCC...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCGATGAGCTGGGGAATTaGCTGGCAGTCTCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPDELGN*LAVSGP
Trigger: AGGCCCTGAGACTGCCAGCAAATTCCCCAGCTCATC...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTGTCTGGCAGCCGGCGCCACTGCTaGCCATTGAACTTCTTTCGG +
Preference number: 5 (lower is better)
Translates to: TGKDKWLPGEAVTIPLSGSRRHC*PLNFFR
Trigger: CCGAAAGAAGTTCAATGGCAAGCAGTGGCGCCGGCT...GCCAGACAGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCTTTATGGGGCTGAAATaGGCAGGGCGGAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGFMGLK*AGRKPK
Trigger: CTTTGGCTTCCGCCCTGCCAATTTCAGCCCCATAAA...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 90 bp GAATGCTGGCAATGGCTGCCTTTACTTTCTGGGGAGCTTTTGGGCTaGGTCGCTGAGCTTTGGGAGCCACTAAGCTGTAGGTCATGGAGC +
Preference number: 5 (lower is better)
Translates to: ECWQWLPLLSGELLG*VAELWEPLSCRSWS
Trigger: GCTCCATGACCTACAGCTTAGTGGCTCCCAAAGCTCAGCGACCCAGCCCAAAAGCTCCCCAGAAAGTAAAGGCAGCCATTGCCAGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCCATCTGGGTCAGTTCTaGAAGTGCTTGGCTGTCTAC +
Preference number: 5 (lower is better)
Translates to: NRPHSAPNWKGQMASWGGHLGQF*KCLAVY
Trigger: GTAGACAGCCAAGCACTTCAAGAACTGACCCAGATG...GCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAACTTCTGACAGGACCTaGTCCACAGAGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGTSDRT*STESKV
Trigger: GACCTTTGACTCTGTGGACAAGGTCCTGTCAGAAGT...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000005578.13
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGCAGCGAGTCCCCAGGTaGCTACCAAAGCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: CPQHREGIYIQGNRPHSAQRVPR*LPKLML
Trigger: CAACATCAGCTTTGGTAGCAACCTGGGGACTCGCTG...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCACCTCTCCAGGGAATTaGGAAGGCAGTGGCACATCG +
Preference number: 5 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPTSPGN*EGSGTS
Trigger: CGATGTGCCACTGCCTTCCAAATTCCCTGGAGAGGT...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 90 bp TGGTGCCTAGAGGCAGAGTGTGCCCACCTGCTGACTGTACATAGGTaGTTCTTGTGGAAGAGGGCAACAGGACCTTCTGAGGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: WCLEAECAHLLTVHR*FLWKRATGPSEAVM
Trigger: CATCACAGCCTCAGAAGGTCCTGTTGCCCTCTTCCACAAGAATCACCTATGTACAGTCAGCAGGTGGGCACACTCTGCCTCTAGGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS GCA 90 bp TCCCGCTCTTCAGGGGCTCCTACCACACCAACATTTCCAGTGCCATaGTCCTCCACATATTTCTTCTTCGGGGCCCGAGACTTGAATGTG +
Preference number: 5 (lower is better)
Translates to: SRSSGAPTTPTFPVP*SSTYFFFGARDLNV
Trigger: CACATTCAAGTCTCGGGCCCCGAAGAAGAAATATGTGGAGGAGCATGGCACTGGAAATGTTGGTGTGGTAGGAGCCCCTGAAGAGCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS-3UTR CAA 90 bp GGGAACAGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGATTCTTTCGGTCCTTGTaGCACCATTTCCAATCTGGG +
Preference number: 5 (lower is better)
Translates to: GNRPHSAPNWKGQMASWGFFRSL*HHFQSG
Trigger: CCCAGATTGGAAATGGTGCAACAAGGACCGAAAGAA...TCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AGGCCACATTCCGCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTGACTTCTTTCGGTCCTaGTTGCACCATTTCCAATCT +
Preference number: 5 (lower is better)
Translates to: RPHSAPNWKGQMASWGGGDFFRS*LHHFQS
Trigger: AGATTGGAAATGGTGCAACAAGGACCGAAAGAAGTC...ACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGCGGAATGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATACAGTTCTTGAAGTGCTaGGCTGTCTACTTCCCCACC +
Preference number: 5 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIQFLKC*AVYFPT
Trigger: GGTGGGGAAGTAGACAGCCAAGCACTTCAAGAACTG...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CCCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATCATCTGGGTCAGTTCTaGAAGTGCTTGGCTGTCTAC +
Preference number: 5 (lower is better)
Translates to: PKAHTTLQLAALTGAILHHLGQF*KCLAVY
Trigger: GTAGACAGCCAAGCACTTCAAGAACTGACCCAGATG...ATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATACACCTGCTATGTCATTaGAAGATGCCTCAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIHLLCH*KMPQPD
Trigger: GTCGGGCTGAGGCATCTTCAAATGACATAGCAGGTG...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACACTTCTGACAGGACCTaGTCCACAGAGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYTSDRT*STESKV
Trigger: GACCTTTGACTCTGTGGACAAGGTCCTGTCAGAAGT...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000005578.13
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGCAGTGGCGGGGCAACTaGGGCAGTGCCAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWQWRGN*GSARVR
Trigger: TCGGACTCTGGCACTGCCCAAGTTGCCCCGCCACTG...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp TGCCCCCAGCACAGGGAGGGAATATATATACAAGGGAACAGGCCACATTCCGCGTCTGACAGGACCCTGTaGTCCACAGAGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: CPQHREGIYIQGNRPHSASDRTL*STESKV
Trigger: GACCTTTGACTCTGTGGACAACAGGGTCCTGTCAGA...CGCGGAATGTGGCCTGTTCCCTTGTATATATATTCCCTCCCTGTGCTGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163320.8
CDS-3UTR CAA 90 bp GCGCCGAACTGGAAAGGACAAATGGCTTCCTGGGGAGGCGGTAACTATCCCACTCTACCAAAGCTGATGTaGGAGACCTCAGCATCCTCA +
Preference number: 5 (lower is better)
Translates to: APNWKGQMASWGGGNYPTLPKLM*ETSASS
Trigger: TGAGGATGCTGAGGTCTCCAACATCAGCTTTGGTAG...AGTGGGATAGTTACCGCCTCCCCAGGAAGCCATTTGTCCTTTCCAGTTCGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCAGGCCCTCCATCTCTTaGGTTCTCATGGACAAGTGG +
Preference number: 5 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPRPSIS*VLMDKW
Trigger: CCACTTGTCCATGAGAACCAAAGAGATGGAGGGCCT...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCACCTGCTATGTCATTaGAAGATGCCTCAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCHLLCH*KMPQPD
Trigger: GTCGGGCTGAGGCATCTTCAAATGACATAGCAGGTG...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CAGTGGAGGGTATCTGCCCCTGCTGCCCCCAGCACAGGGAGGGAATATATATACAATCTTGCTAGGTTGTaGGGCACCATTTTGGACAGG +
Preference number: 5 (lower is better)
Translates to: QWRVSAPAAPSTGREYIYNLARL*GTILDR
Trigger: CCTGTCCAAAATGGTGCCCAACAACCTAGCAAGATT...GTATATATATTCCCTCCCTGTGCTGGGGGCAGCAGGGGCAGATACCCTCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACACAGTGGCGGGGCAACTaGGGCAGTGCCAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: TALISVIAASRHSKKYCTQWRGN*GSARVR
Trigger: TCGGACTCTGGCACTGCCCAAGTTGCCCCGCCACTG...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTCCGCTGAGACCTCAGTaGCCGCAGGTCATAGCCTTC +
Preference number: 5 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSPLRPQ*PQVIAF
Trigger: GAAGGCTATGACCTGCGGCAACTGAGGTCTCAGCGG...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATATTCTTTCGGTCCTTGTaGCACCATTTCCAATCTGGG +
Preference number: 5 (lower is better)
Translates to: PRLILPSSLQPSQEPFCIFFRSL*HHFQSG
Trigger: CCCAGATTGGAAATGGTGCAACAAGGACCGAAAGAA...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCCCTCAGTCACTCGTTCCTaGCACTTGAGATCAATGTCG +
Preference number: 5 (lower is better)
Translates to: HTSGYLQELSGGYLPLLPSVTRS*HLRSMS
Trigger: CGACATTGATCTCAAGTGCAAGGAACGAGTGACTGA...GGGCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CCAAGGCTCATACTACCCTCCAGCTTGCAGCCCTCACAGGAGCCATTCTGCATATCAGTCACTCGTTCCTaGCACTTGAGATCAATGTCG +
Preference number: 5 (lower is better)
Translates to: PRLILPSSLQPSQEPFCISVTRS*HLRSMS
Trigger: CGACATTGATCTCAAGTGCAAGGAACGAGTGACTGA...TATGCAGAATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTAGTATGAGCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAACAGGCCGTACCACATaGGTGACCATGGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: LGMGTMVGGITFLESTTQTGRTT*VTMVAA
Trigger: TGCTGCCACCATGGTCACCAATGTGGTACGGCCTGT...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTGTGCCTACCAGCAAGTaGGTGACAGTAGCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSVPTSK*VTVAGA
Trigger: GGCACCTGCTACTGTCACCAACTTGCTGGTAGGCAC...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CACACACTTCAGGTTATCTACAAGAGCTCAGTGGAGGGTATCTGCCCCTGCTGCACAGTAAAGGTTAGGTaGGTCTGGAAGGTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: HTLQVIYKSSVEGICPCCTVKVR*VWKVGR
Trigger: CCTACCCACCTTCCAGACCAACCTAACCTTTACTGT...GCAGCAGGGGCAGATACCCTCCACTGAGCTCTTGTAGATAACCTGAAGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAAACGAGGTTCGACATTaGTCCACACTGTTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: LGMGTMVGGITFLESTTQNEVRH*STLFRA
Trigger: GGCCCGGAACAGTGTGGACAAATGTCGAACCTCGTT...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp TCCCACTGTCTGGCCCCCAATTCCTGCCATCTATATACTGTCCATATCCTGAGGAATCTTGCTAGGTTGTaGGGCACCATTTTGGACAGG +
Preference number: 5 (lower is better)
Translates to: SHCLAPNSCHLYTVHILRNLARL*GTILDR
Trigger: CCTGTCCAAAATGGTGCCCAACAACCTAGCAAGATT...CCTCAGGATATGGACAGTATATAGATGGCAGGAATTGGGGGCCAGACAGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACAGAACGTCTCCTCATCTaGCGCTTGGGTGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: TALISVIAASRHSKKYCTERLLI*RLGEVG
Trigger: TCCCACCTCACCCAAGCGCAAGATGAGGAGACGTTC...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp AATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTGGCAGTTCTTGAAGTGCTaGGCTGTCTACTTCCCCACC +
Preference number: 5 (lower is better)
Translates to: NGDNGRGNHLLRKYNPSWQFLKC*AVYFPT
Trigger: GGTGGGGAAGTAGACAGCCAAGCACTTCAAGAACTG...CCAACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAGTGATTCCCCCAGCCTaGCCTAGGGCACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQVIPPA*PRAPGC
Trigger: GCAGCCAGGTGCCCTAGGCAAGGCTGGGGGAATCAC...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAATCTGGGTGGGCCTaGAAGTGGGCCTCTTTCACC +
Preference number: 5 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGQSGWA*KWASFT
Trigger: GGTGAAAGAGGCCCACTTCAAGGCCCACCCAGATTG...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACACAGTTCTTGAAGTGCTaGGCTGTCTACTTCCCCACC +
Preference number: 5 (lower is better)
Translates to: TALISVIAASRHSKKYCTQFLKC*AVYFPT
Trigger: GGTGGGGAAGTAGACAGCCAAGCACTTCAAGAACTG...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGTTCAGTCACTCGTTCCTaGCACTTGAGATCAATGTCG +
Preference number: 5 (lower is better)
Translates to: GNGDNGRGNHLLRKYNPSSVTRS*HLRSMS
Trigger: CGACATTGATCTCAAGTGCAAGGAACGAGTGACTGA...ACTTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAACAGGCCGTACCACATaGGTGACCATGGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGTGRTT*VTMVAA
Trigger: TGCTGCCACCATGGTCACCAATGTGGTACGGCCTGT...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAGTGCCTACCAGCAAGTaGGTGACAGTAGCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGVPTSK*VTVAGA
Trigger: GGCACCTGCTACTGTCACCAACTTGCTGGTAGGCAC...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAGAGGCTGGTGGGCCCTaGGGCAGAATGGTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQEAGGP*GRMVAA
Trigger: TGCTGCTACCATTCTGCCCAAGGGCCCACCAGCCTC...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000164820.2
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACTCAGCATCCTCAGGTaGCTTGGGCTCCACGGAAGA +
Preference number: 5 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGLSILR*LGLHGR
Trigger: TCTTCCGTGGAGCCCAAGCAACCTGAGGATGCTGAG...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGAGATGAGTCTCGTTCCTaGGGCAAGGCACTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGDESRS*GKALRD
Trigger: GTCTCTGAGTGCCTTGCCCAAGGAACGAGACTCATC...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp CTGGGAATGGGGACAATGGTAGGGGGAATCACCTTCTTAGAAAGTACAACCCAAGACTTCTTTCGGTCCTaGTTGCACCATTTCCAATCT +
Preference number: 5 (lower is better)
Translates to: LGMGTMVGGITFLESTTQDFFRS*LHHFQS
Trigger: AGATTGGAAATGGTGCAACAAGGACCGAAAGAAGTC...TTGGGTTGTACTTTCTAAGAAGGTGATTCCCCCTACCATTGTCCCCATTCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAACAGTGTAGACCAGGCTaGGCGGAGCTTGGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQQCRPG*AELGKV
Trigger: CACCTTCCCAAGCTCCGCCAAGCCTGGTCTACACTG...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000164820.2
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAGATGAGCTGGGGAATTaGCTGGCAGTCTCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQDELGN*LAVSGP
Trigger: AGGCCCTGAGACTGCCAGCAAATTCCCCAGCTCATC...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAAAAGTACAACCCAAGTaGGGAGGGCAGAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQKVQPK*GGQRVG
Trigger: CCCCACCCTCTGCCCTCCCAACTTGGGTTGTACTTT...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000164820.2
CDS-3UTR CAA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAAGATGAGTCTCGTTCCTaGGGCAAGGCACTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQDESRS*GKALRD
Trigger: GTCTCTGAGTGCCTTGCCCAAGGAACGAGACTCATC...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACAGCTTTAATCTCGGTCATTGCGGCTTCTCGGCACAGTAAGAAATATTGCACAGACTTCTTTCGGTCCTaGTTGCACCATTTCCAATCT +
Preference number: 5 (lower is better)
Translates to: TALISVIAASRHSKKYCTDFFRS*LHHFQS
Trigger: AGATTGGAAATGGTGCAACAAGGACCGAAAGAAGTC...TGTGCAATATTTCTTACTGTGCCGAGAAGCCGCAATGACCGAGATTAAAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp ACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGACAATTGAATGTGGCTGTCTaGCGACTGAGTGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: TVRNIAHDQHVLFWEWGQLNVAV*RLSEGS
Trigger: GGAGCCCTCACTCAGTCGCAAGACAGCCACATTCAA...TTGTCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS-3UTR CAA 90 bp GGCACAGTAAGAAATATTGCACATGATCAACATGTTTTGTTCTGGGAATGGGGATTCTTTCGGTCCTTGTaGCACCATTTCCAATCTGGG +
Preference number: 5 (lower is better)
Translates to: GTVRNIAHDQHVLFWEWGFFRSL*HHFQSG
Trigger: CCCAGATTGGAAATGGTGCAACAAGGACCGAAAGAA...TCCCCATTCCCAGAACAAAACATGTTGATCATGTGCAATATTTCTTACTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS GCA 72 bp TGGGTGGGGGCCCAGGTCTGGTGGTGTCAGCACGCCTaGCTTAGGGGTGCTGGCGCTCAGGTGGCGGCTGCG +
Preference number: 6 (lower is better)
Translates to: WVGAQVWWCQHA*LRGAGAQVAAA
Trigger: CGCAGCCGCCACCTGAGCGCCAGCACCCCTAAGGCAGGCGTGCTGACACCACCAGACCTGGGCCCCCACCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp CTGCCACCCTGGCTCCCTTCCTGGCAGGGCGAAGGCTaGTCACTAGGGCGGCCAGGGCCACCAAAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LPPWLPSWQGEG*SLGRPGPPKAG
Trigger: CCCAGCCTTTGGTGGCCCTGGCCGCCCTAGTGAGCAGCCTTCGCCCTGCCAGGAAGGGAGCCAGGGTGGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp GGCGCGAGCAGTACCCGCGCCGCTGGGACTCCTTCATaGAGCCATCCCGAGAGCACAGCCGGCGCCACTGCT +
Preference number: 6 (lower is better)
Translates to: GASSTRAAGTPS*SHPESTAGATA
Trigger: AGCAGTGGCGCCGGCTGTGCTCTCGGGATGGCTGCATGAAGGAGTCCCAGCGGCGCGGGTACTGCTCGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp AGGCTGTCCAGGCCCAGGCTCTGGGGGTGGAGGCAGTaGCGGGGCAACTTGGGCAGTGCCAGAGTCCGAGCC +
Preference number: 6 (lower is better)
Translates to: RLSRPRLWGWRQ*RGNLGSARVRA
Trigger: GGCTCGGACTCTGGCACTGCCCAAGTTGCCCCGCCACTGCCTCCACCCCCAGAGCCTGGGCCTGGACAGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS CCA 72 bp CCGGGCTGCCACACCCGCAGGCCGCCCAGTCCCACCTaGCCCACTGTCTGCCAGGCCCTCCATCTCTTTGGT +
Preference number: 6 (lower is better)
Translates to: PGCHTRRPPSPT*PTVCQALHLFG
Trigger: ACCAAAGAGATGGAGGGCCTGGCAGACAGTGGGCCAGGTGGGACTGGGCGGCCTGCGGGTGTGGCAGCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 90 bp GGCCCTGCCTGCTCCTGTGGCTGTGCCTCCTCCTCCTCCTCTGGCTaGTCACCCTCCCCGGCCCCTCGCCGTCTCAAAGCCTTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: GPACSCGCASSSSSG*SPSPAPRRLKALAL
Trigger: CAGGGCCAAGGCTTTGAGACGGCGAGGGGCCGGGGAGGGTGACAAGCCAGAGGAGGAGGAGGAGGCACAGCCACAGGAGCAGGCAGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS GCA 72 bp CCCGTCTCCGACATGCTCCGTTCCCGCGTCTCCTTGTaGCCTCCTGCCAGACCCAGGCTCGCAGGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: PVSDMLRSRVSL*PPARPRLAGLA
Trigger: GGCCAAGCCTGCGAGCCTGGGTCTGGCAGGAGGGCACAAGGAGACGCGGGAACGGAGCATGTCGGAGACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS GCA 72 bp TGCGCTCGGGTGTGTCCCCAGCTGCCCTCCCACTACTaGCCTCGCTGCTGCCACTGCTGCTTCCACTGGGGC +
Preference number: 6 (lower is better)
Translates to: CARVCPQLPSHY*PRCCHCCFHWG
Trigger: GCCCCAGTGGAAGCAGCAGTGGCAGCAGCGAGGGCAGTAGTGGGAGGGCAGCTGGGGACACACCCGAGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS GCA 72 bp ATCGCCCCAGTCAAACTCAGTGCTTCCTTCCCGGGCTaGCACACCCGCAGGCCGCCCAGTCCCACCTGGCCC +
Preference number: 6 (lower is better)
Translates to: IAPVKLSASFPG*HTRRPPSPTWP
Trigger: GGGCCAGGTGGGACTGGGCGGCCTGCGGGTGTGGCAGCCCGGGAAGGAAGCACTGAGTTTGACTGGGGCGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp CCACGGGCTGGAAGGGTGAAGAAGCCAGGCCCAAGGTaGGCATCGGCTGGGCCACAGCAGTCGGTGCGGCTG +
Preference number: 6 (lower is better)
Translates to: PRAGRVKKPGPR*ASAGPQQSVRL
Trigger: CAGCCGCACCGACTGCTGTGGCCCAGCCGATGCCCACCTTGGGCCTGGCTTCTTCACCCTTCCAGCCCGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 72 bp GCGAGCACGGGCTGCTGGTGCAGCTCCCTTCTCCAGTaGGGCCACACTGCTACTGCGGCTGCCACCCTGGCT +
Preference number: 6 (lower is better)
Translates to: ASTGCWCSSLLQ*GHTATAAATLA
Trigger: AGCCAGGGTGGCAGCCGCAGTAGCAGTGTGGCCTCACTGGAGAAGGGAGCTGCACCAGCAGCCCGTGCTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp ACCCAAGTCCTGGCTACGGCGCACCTGGCGCACGACTaGAGGCAGGAAGAGGCCATCACCACGCCGAGCCAG +
Preference number: 6 (lower is better)
Translates to: TQVLATAHLAHD*RQEEAITTPSQ
Trigger: CTGGCTCGGCGTGGTGATGGCCTCTTCCTGCCTGCAGTCGTGCGCCAGGTGCGCCGTAGCCAGGACTTGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp CTAGACGTGGGCGGGAGTCTCCCCGGGCTGCCACACTaGTGGCCTCACTGTCCCTCGAAGTCTCATCGCCCC +
Preference number: 6 (lower is better)
Translates to: LDVGGSLPGLPH*WPHCPSKSHRP
Trigger: GGGGCGATGAGACTTCGAGGGACAGTGAGGCCAGCAGTGTGGCAGCCCGGGGAGACTCCCGCCCACGTCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp AAGGCACGGTCCCCAGGGAACTGCACACCCAAGTCCTaGCTACGGCGCACCTGGCGCACGACTGCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: KARSPGNCTPKS*LRRTWRTTAGR
Trigger: CCTGCCTGCAGTCGTGCGCCAGGTGCGCCGTAGCCAGGACTTGGGTGTGCAGTTCCCTGGGGACCGTGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp GACGTGGGCGGGAGTCTCCCCGGGCTGCCACACTGCTaGCCTCACTGTCCCTCGAAGTCTCATCGCCCCAGT +
Preference number: 6 (lower is better)
Translates to: DVGGSLPGLPHC*PHCPSKSHRPS
Trigger: ACTGGGGCGATGAGACTTCGAGGGACAGTGAGGCCAGCAGTGTGGCAGCCCGGGGAGACTCCCGCCCACGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp CTCCCTTCTCCAGTGAGGCCACACTGCTACTGCGGCTaGCACCCTGGCTCCCTTCCTGGCAGGGCGAAGGCT +
Preference number: 6 (lower is better)
Translates to: LPSPVRPHCYCG*HPGSLPGRAKA
Trigger: AGCCTTCGCCCTGCCAGGAAGGGAGCCAGGGTGGCAGCCGCAGTAGCAGTGTGGCCTCACTGGAGAAGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp CTGCTGGTGCAGCTCCCTTCTCCAGTGAGGCCACACTaGTACTGCGGCTGCCACCCTGGCTCCCTTCCTGGC +
Preference number: 6 (lower is better)
Translates to: LLVQLPSPVRPH*YCGCHPGSLPG
Trigger: GCCAGGAAGGGAGCCAGGGTGGCAGCCGCAGTAGCAGTGTGGCCTCACTGGAGAAGGGAGCTGCACCAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp GGCCCCTCGCCGTCTCAAAGCCTTGGCCCTGGTAGCTaGTGGGGACTTGCTGCCACTGGCGGAACCTGCAAG +
Preference number: 6 (lower is better)
Translates to: GPSPSQSLGPGS*WGLAATGGTCK
Trigger: CTTGCAGGTTCCGCCAGTGGCAGCAAGTCCCCACCAGCTACCAGGGCCAAGGCTTTGAGACGGCGAGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS CCA 72 bp AAGGGTGAAGAAGCCAGGCCCAAGGTGGGCATCGGCTaGGCCACAGCAGTCGGTGCGGCTGGAGGCACAGTG +
Preference number: 6 (lower is better)
Translates to: KGEEARPKVGIG*ATAVGAAGGTV
Trigger: CACTGTGCCTCCAGCCGCACCGACTGCTGTGGCCCAGCCGATGCCCACCTTGGGCCTGGCTTCTTCACCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 72 bp GTTCCCGTCTCCGACATGCTCCGTTCCCGCGTCTCCTaGTGCCCTCCTGCCAGACCCAGGCTCGCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: VPVSDMLRSRVS*CPPARPRLAGL
Trigger: CAAGCCTGCGAGCCTGGGTCTGGCAGGAGGGCACAAGGAGACGCGGGAACGGAGCATGTCGGAGACGGGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CAA 90 bp GCCCCTCGCCGTCTCAAAGCCTTGGCCCTGGTAGCTGGTGGGGACTaGCTGCCACTGGCGGAACCTGCAAGGCCAGGGCATGCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: APRRLKALALVAGGD*LPLAEPARPGHAFF
Trigger: GAAGAAGGCATGCCCTGGCCTTGCAGGTTCCGCCAGTGGCAGCAAGTCCCCACCAGCTACCAGGGCCAAGGCTTTGAGACGGCGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS CAA 90 bp CCCCCGGCCCGTGCCTCACCGGCAGTGCCCACCTCTCCAGGGAATTaGGAAGGCAGTGGCACATCGGGGTTGCGGACAATGACAGGTGAG +
Preference number: 6 (lower is better)
Translates to: PPARASPAVPTSPGN*EGSGTSGLRTMTGE
Trigger: CTCACCTGTCATTGTCCGCAACCCCGATGTGCCACTGCCTTCCAAATTCCCTGGAGAGGTGGGCACTGCCGGTGAGGCACGGGCCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 72 bp ACCACAAGCCTCAGGGGGCTCGTCCTCCAGGTCGGCTaGGTGCTCACTGGCCGTGTCAGTAGAGGAGGACCG +
Preference number: 6 (lower is better)
Translates to: TTSLRGLVLQVG*VLTGRVSRGGP
Trigger: CGGTCCTCCTCTACTGACACGGCCAGTGAGCACTCAGCCGACCTGGAGGACGAGCCCCCTGAGGCTTGTGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp CAAGCCTCAGGGGGCTCGTCCTCCAGGTCGGCTGAGTaGTCACTGGCCGTGTCAGTAGAGGAGGACCGAGTG +
Preference number: 6 (lower is better)
Translates to: QASGGSSSRSAE*SLAVSVEEDRV
Trigger: CACTCGGTCCTCCTCTACTGACACGGCCAGTGAGCACTCAGCCGACCTGGAGGACGAGCCCCCTGAGGCTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp GGAAGAAGGACAAGGAGGCAAAGCGGGCCCAGGCTCTaGCTGCTCCTCCTCTGGGCCTGCAGGGTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: GRRTRRQSGPRL*LLLLWACRVLP
Trigger: AGGAAGCACCCTGCAGGCCCAGAGGAGGAGCAGGCAGAGCCTGGGCCCGCTTTGCCTCCTTGTCCTTCTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp TGTCCCTCGAAGTCTCATCGCCCCAGTCAAACTCAGTaGTTCCTTCCCGGGCTGCCACACCCGCAGGCCGCC +
Preference number: 6 (lower is better)
Translates to: CPSKSHRPSQTQ*FLPGLPHPQAA
Trigger: GGCGGCCTGCGGGTGTGGCAGCCCGGGAAGGAAGCACTGAGTTTGACTGGGGCGATGAGACTTCGAGGGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp ACATCGGGGTTGCGGACAATGACAGGTGAGTCCCGCTaGACGGCGGGTACCCTTCGCACAGAGGGCCCTGGA +
Preference number: 6 (lower is better)
Translates to: TSGLRTMTGESR*TAGTLRTEGPG
Trigger: TCCAGGGCCCTCTGTGCGAAGGGTACCCGCCGTGCAGCGGGACTCACCTGTCATTGTCCGCAACCCCGATGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp ATAGCCTTCACTGGTGCCTGTAGAGGGCCAGGGGCCTaGACCACAAGCCTCAGGGGGCTCGTCCTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: IAFTGACRGPGA*TTSLRGLVLQV
Trigger: GACCTGGAGGACGAGCCCCCTGAGGCTTGTGGTCCAGGCCCCTGGCCCTCTACAGGCACCAGTGAAGGCTAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp GGGAACTGCACACCCAAGTCCTGGCTACGGCGCACCTaGCGCACGACTGCAGGCAGGAAGAGGCCATCACCA +
Preference number: 6 (lower is better)
Translates to: GNCTPKSWLRRT*RTTAGRKRPSP
Trigger: TGGTGATGGCCTCTTCCTGCCTGCAGTCGTGCGCCAGGTGCGCCGTAGCCAGGACTTGGGTGTGCAGTTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp GGCGTGCAGACCACGTCGCCCTTCTTGTACTTCTGCTaGGCGGCTGTCAATGGCGTGCGAGCACGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: GVQTTSPFLYFC*AAVNGVRARAA
Trigger: AGCAGCCCGTGCTCGCACGCCATTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGACGTGGTCTGCACGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp GTCAGCACGCCTGCCTTAGGGGTGCTGGCGCTCAGGTaGCGGCTGCGAACAGCAGTGCGTTGGATGACAGGT +
Preference number: 6 (lower is better)
Translates to: VSTPALGVLALR*RLRTAVRWMTG
Trigger: ACCTGTCATCCAACGCACTGCTGTTCGCAGCCGCCACCTGAGCGCCAGCACCCCTAAGGCAGGCGTGCTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 72 bp AGGCAGTGGCACATCGGGGTTGCGGACAATGACAGGTaGGTCCCGCTGCACGGCGGGTACCCTTCGCACAGA +
Preference number: 6 (lower is better)
Translates to: RQWHIGVADNDR*VPLHGGYPSHR
Trigger: TCTGTGCGAAGGGTACCCGCCGTGCAGCGGGACTCACCTGTCATTGTCCGCAACCCCGATGTGCCACTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp TTGGGCGTGCAGACCACGTCGCCCTTCTTGTACTTCTaGTGGGCGGCTGTCAATGGCGTGCGAGCACGGGCT +
Preference number: 6 (lower is better)
Translates to: LGVQTTSPFLYF*WAAVNGVRARA
Trigger: AGCCCGTGCTCGCACGCCATTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGACGTGGTCTGCACGCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp GCCCTCACAGGAGCCATTCTTGGATGGGAAGATGTCTaGGTAGCGGGCCTGGAAGGCTGCTGTGGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: ALTGAILGWEDV*VAGLEGCCGLG
Trigger: GCCCAGGCCACAGCAGCCTTCCAGGCCCGCTACGCAGACATCTTCCCATCCAAGAATGGCTCCTGTGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163901.2
CDS CCA 72 bp GTCGCCCTTCTTGTACTTCTGCTGGGCGGCTGTCAATaGCGTGCGAGCACGGGCTGCTGGTGCAGCTCCCTT +
Preference number: 6 (lower is better)
Translates to: VALLVLLLGGCQ*RASTGCWCSSL
Trigger: AAGGGAGCTGCACCAGCAGCCCGTGCTCGCACGCCATTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 72 bp AAGGTGGCAGAATCCGTAGGAGGAAACCGAGTGGCCTaGGAAGGTGTTGCTGGGCCCCCGGCTCCAGGGGGT +
Preference number: 6 (lower is better)
Translates to: KVAESVGGNRVA*EGVAGPPAPGG
Trigger: ACCCCCTGGAGCCGGGGGCCCAGCAACACCTTCCAAGGCCACTCGGTTTCCTCCTACGGATTCTGCCACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CAA 72 bp CGTCTCAAAGCCTTGGCCCTGGTAGCTGGTGGGGACTaGCTGCCACTGGCGGAACCTGCAAGGCCAGGGCAT +
Preference number: 6 (lower is better)
Translates to: RLKALALVAGGD*LPLAEPARPGH
Trigger: ATGCCCTGGCCTTGCAGGTTCCGCCAGTGGCAGCAAGTCCCCACCAGCTACCAGGGCCAAGGCTTTGAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS CAA 90 bp TTAGAGGCAATGGGCACAGGAGTGCTGCTGACAGGCCGTACCACATaGGTGACCATGGTGGCAGCAGGGCGGCACAGAGGGGCTGCGGGA +
Preference number: 6 (lower is better)
Translates to: LEAMGTGVLLTGRTT*VTMVAAGRHRGAAG
Trigger: TCCCGCAGCCCCTCTGTGCCGCCCTGCTGCCACCATGGTCACCAATGTGGTACGGCCTGTCAGCAGCACTCCTGTGCCCATTGCCTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CAA 90 bp GTGCCCACCTCTCCAGGGAATTTGGAAGGCAGTGGCACATCGGGGTaGCGGACAATGACAGGTGAGTCCCGCTGCACGGCGGGTACCCTT +
Preference number: 6 (lower is better)
Translates to: VPTSPGNLEGSGTSG*RTMTGESRCTAGTL
Trigger: AAGGGTACCCGCCGTGCAGCGGGACTCACCTGTCATTGTCCGCAACCCCGATGTGCCACTGCCTTCCAAATTCCCTGGAGAGGTGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp CCTCTCGGTAGGCAGCCACACCAGGTTCCACACAAGTaGAGACAGCCGTGCCCACCATCAGTGCACCTGGAG +
Preference number: 6 (lower is better)
Translates to: PLGRQPHQVPHK*RQPCPPSVHLE
Trigger: CTCCAGGTGCACTGATGGTGGGCACGGCTGTCTGCACTTGTGTGGAACCTGGTGTGGCTGCCTACCGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp CCTTCTTGTACTTCTGCTGGGCGGCTGTCAATGGCGTaGGAGCACGGGCTGCTGGTGCAGCTCCCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: PSCTSAGRLSMA*EHGLLVQLPSP
Trigger: TGGAGAAGGGAGCTGCACCAGCAGCCCGTGCTCGCACGCCATTGACAGCCGCCCAGCAGAAGTACAAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp GACACGCCCACCTGGCCAGGAGCCAGCAAAGGAGCTTaGCCTGCTGAGAGCAGAGGCTGTACAAAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: DTPTWPGASKGA*PAESRGCTKAG
Trigger: TCCTGCCTTTGTACAGCCTCTGCTCTCAGCAGGCCAAGCTCCTTTGCTGGCTCCTGGCCAGGTGGGCGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000005578.13
ENSMUST00000165239.3
CDS CCA 72 bp ACACGGAGTCCACTCCAGAGTCTAAGCTGTCACTCTTaGGGAAGTCTGGGGCGGCTCCCCCACCTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: TRSPLQSLSCHS*GSLGRLPHLLL
Trigger: GAGCAGGAGGTGGGGGAGCCGCCCCAGACTTCCCCAAGAGTGACAGCTTAGACTCTGGAGTGGACTCCGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp GCTCGGAAGCCAGCCGGTGTGGAGGGGGTAGGTGTGTaGGACACGGAGTCCACTCCAGAGTCTAAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: ARKPAGVEGVGV*DTESTPESKLS
Trigger: TGACAGCTTAGACTCTGGAGTGGACTCCGTGTCCCACACACCTACCCCCTCCACACCGGCTGGCTTCCGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 72 bp TTCTTCTTCGGGGCCCGAGACTTGAATGTGGCTGTCTaGCGACTGAGTGAGGGCTCCCAGCGGCCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: FFFGARDLNVAV*RLSEGSQRPAS
Trigger: GGAGGCAGGCCGCTGGGAGCCCTCACTCAGTCGCAAGACAGCCACATTCAAGTCTCGGGCCCCGAAGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS CAA 72 bp CGGATGCCATTGGGCGTGCAGACCACGTCGCCCTTCTaGTACTTCTGCTGGGCGGCTGTCAATGGCGTGCGA +
Preference number: 6 (lower is better)
Translates to: RMPLGVQTTSPF*YFCWAAVNGVR
Trigger: TCGCACGCCATTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGACGTGGTCTGCACGCCCAATGGCATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 72 bp CGTGCCTCACCGGCAGTGCCCACCTCTCCAGGGAATTaGGAAGGCAGTGGCACATCGGGGTTGCGGACAATG +
Preference number: 6 (lower is better)
Translates to: RASPAVPTSPGN*EGSGTSGLRTM
Trigger: CATTGTCCGCAACCCCGATGTGCCACTGCCTTCCAAATTCCCTGGAGAGGTGGGCACTGCCGGTGAGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 90 bp TTCATGCAGCCATCCCGAGAGCACAGCCGGCGCCACTGCTTGCCATaGAACTTCTTTCGGATGCCATTGGGCGTGCAGACCACGTCGCCC +
Preference number: 6 (lower is better)
Translates to: FMQPSREHSRRHCLP*NFFRMPLGVQTTSP
Trigger: GGGCGACGTGGTCTGCACGCCCAATGGCATCCGAAAGAAGTTCAATGGCAAGCAGTGGCGCCGGCTGTGCTCTCGGGATGGCTGCATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 72 bp ATTTGGAAGGCAGTGGCACATCGGGGTTGCGGACAATaGCAGGTGAGTCCCGCTGCACGGCGGGTACCCTTC +
Preference number: 6 (lower is better)
Translates to: IWKAVAHRGCGQ*QVSPAARRVPF
Trigger: GAAGGGTACCCGCCGTGCAGCGGGACTCACCTGTCATTGTCCGCAACCCCGATGTGCCACTGCCTTCCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp TCCCGATCCTCCTTGCTCGGAGGCAGAACCAGTGTCTaGAGAAGGTTTCCTCCCCCACTGGGAGGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: SRSSLLGGRTSV*RRFPPPLGGAA
Trigger: TGCAGCACCTCCCAGTGGGGGAGGAAACCTTCTGCAGACACTGGTTCTGCCTCCGAGCAAGGAGGATCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS GCA 72 bp GGGCTGAGGGCACTCGTGTACCCTCCCGATCCTCCTTaGTCGGAGGCAGAACCAGTGTCTGCAGAAGGTTTC +
Preference number: 6 (lower is better)
Translates to: GLRALVYPPDPP*SEAEPVSAEGF
Trigger: GAAACCTTCTGCAGACACTGGTTCTGCCTCCGAGCAAGGAGGATCGGGAGGGTACACGAGTGCCCTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS GCA 72 bp CACCCATTGGGGAGCCCCCAGGCACCCGGGATCCTGTaGCCATTTCAGTCCTGGCACCTGCTATGTCATTTG +
Preference number: 6 (lower is better)
Translates to: HPLGSPQAPGIL*PFQSWHLLCHL
Trigger: CAAATGACATAGCAGGTGCCAGGACTGAAATGGGCACAGGATCCCGGGTGCCTGGGGGCTCCCCAATGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CAA 72 bp CCATCCCGAGAGCACAGCCGGCGCCACTGCTTGCCATaGAACTTCTTTCGGATGCCATTGGGCGTGCAGACC +
Preference number: 6 (lower is better)
Translates to: PSREHSRRHCLP*NFFRMPLGVQT
Trigger: GGTCTGCACGCCCAATGGCATCCGAAAGAAGTTCAATGGCAAGCAGTGGCGCCGGCTGTGCTCTCGGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 72 bp TCTCCAGGGAATTTGGAAGGCAGTGGCACATCGGGGTaGCGGACAATGACAGGTGAGTCCCGCTGCACGGCG +
Preference number: 6 (lower is better)
Translates to: SPGNLEGSGTSG*RTMTGESRCTA
Trigger: CGCCGTGCAGCGGGACTCACCTGTCATTGTCCGCAACCCCGATGTGCCACTGCCTTCCAAATTCCCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 90 bp GATGGTGGGTGCTTCTCCTCCCCCTCCTCGCAGCGAGTCCCCAGGTaGCTACCAAAGCTGATGTTGGAGACCTCAGCATCCTCAGGTTGC +
Preference number: 6 (lower is better)
Translates to: DGGCFSSPSSQRVPR*LPKLMLETSASSGC
Trigger: GCAACCTGAGGATGCTGAGGTCTCCAACATCAGCTTTGGTAGCAACCTGGGGACTCGCTGCGAGGAGGGGGAGGAGAAGCACCCACCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 90 bp AACTTCTTTCGGATGCCATTGGGCGTGCAGACCACGTCGCCCTTCTaGTACTTCTGCTGGGCGGCTGTCAATGGCGTGCGAGCACGGGCT +
Preference number: 6 (lower is better)
Translates to: NFFRMPLGVQTTSPF*YFCWAAVNGVRARA
Trigger: AGCCCGTGCTCGCACGCCATTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGACGTGGTCTGCACGCCCAATGGCATCCGAAAGAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 90 bp CACAGCCGGCGCCACTGCTTGCCATTGAACTTCTTTCGGATGCCATaGGGCGTGCAGACCACGTCGCCCTTCTTGTACTTCTGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: HSRRHCLPLNFFRMP*GVQTTSPFLYFCWA
Trigger: CGCCCAGCAGAAGTACAAGAAGGGCGACGTGGTCTGCACGCCCAATGGCATCCGAAAGAAGTTCAATGGCAAGCAGTGGCGCCGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 90 bp GACTCCTTCATGCAGCCATCCCGAGAGCACAGCCGGCGCCACTGCTaGCCATTGAACTTCTTTCGGATGCCATTGGGCGTGCAGACCACG +
Preference number: 6 (lower is better)
Translates to: DSFMQPSREHSRRHC*PLNFFRMPLGVQTT
Trigger: CGTGGTCTGCACGCCCAATGGCATCCGAAAGAAGTTCAATGGCAAGCAGTGGCGCCGGCTGTGCTCTCGGGATGGCTGCATGAAGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 90 bp ACAGCAGTGCGTTGGATGACAGGTGAGGCATTTATGGGGCTGAAATaGGCAGGGCGGAAGCCAAAGAGCGGCGAGGGTGAGGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: TAVRWMTGEAFMGLK*AGRKPKSGEGEGEG
Trigger: CCCCTCTCCCTCACCCTCGCCGCTCTTTGGCTTCCGCCCTGCCAATTTCAGCCCCATAAATGCCTCACCTGTCATCCAACGCACTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 72 bp TCTTGTGGAAGAGGGCAACAGGACCTTCTGAGGCTGTaGTGTGGGTCCCGGCATTGTAGCTGGGCTCAGGGG +
Preference number: 6 (lower is better)
Translates to: SCGRGQQDLLRL*CGSRHCSWAQG
Trigger: CCCCTGAGCCCAGCTACAATGCCGGGACCCACATCACAGCCTCAGAAGGTCCTGTTGCCCTCTTCCACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS TCA 72 bp CAGCCGTGCCCACCATCAGTGCACCTGGAGGTGGTGTaGCATCCAAAACAACGTCCACACCACCACCGGGTA +
Preference number: 6 (lower is better)
Translates to: QPCPPSVHLEVV*HPKQRPHHHRV
Trigger: TACCCGGTGGTGGTGTGGACGTTGTTTTGGATGTCACACCACCTCCAGGTGCACTGATGGTGGGCACGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 72 bp CATCCCGAGAGCACAGCCGGCGCCACTGCTTGCCATTaGACTTCTTTCGGATGCCATTGGGCGTGCAGACCA +
Preference number: 6 (lower is better)
Translates to: HPESTAGATACH*TSFGCHWACRP
Trigger: TGGTCTGCACGCCCAATGGCATCCGAAAGAAGTTCAATGGCAAGCAGTGGCGCCGGCTGTGCTCTCGGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp GGGTCCTCAGTTAGGCCTGGAGTAGGATCATTGGGCTaGAGCTCTGGATGTGTTCCCTCAGCTCCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: GSSVRPGVGSLG*SSGCVPSAPGS
Trigger: GGACCCTGGAGCTGAGGGAACACATCCAGAGCTGCAGCCCAATGATCCTACTCCAGGCCTAACTGAGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS CCA 72 bp GCAGACAGCCGTGCCCACCATCAGTGCACCTGGAGGTaGTGTGACATCCAAAACAACGTCCACACCACCACC +
Preference number: 6 (lower is better)
Translates to: ADSRAHHQCTWR*CDIQNNVHTTT
Trigger: GGTGGTGGTGTGGACGTTGTTTTGGATGTCACACCACCTCCAGGTGCACTGATGGTGGGCACGGCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 72 bp TGCTTCTCCTCCCCCTCCTCGCAGCGAGTCCCCAGGTaGCTACCAAAGCTGATGTTGGAGACCTCAGCATCC +
Preference number: 6 (lower is better)
Translates to: CFSSPSSQRVPR*LPKLMLETSAS
Trigger: GGATGCTGAGGTCTCCAACATCAGCTTTGGTAGCAACCTGGGGACTCGCTGCGAGGAGGGGGAGGAGAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 72 bp ATGCAGCCATCCCGAGAGCACAGCCGGCGCCACTGCTaGCCATTGAACTTCTTTCGGATGCCATTGGGCGTG +
Preference number: 6 (lower is better)
Translates to: MQPSREHSRRHC*PLNFFRMPLGV
Trigger: CACGCCCAATGGCATCCGAAAGAAGTTCAATGGCAAGCAGTGGCGCCGGCTGTGCTCTCGGGATGGCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 90 bp CCAGTGCCATGCTCCTCCACATATTTCTTCTTCGGGGCCCGAGACTaGAATGTGGCTGTCTTGCGACTGAGTGAGGGCTCCCAGCGGCCT +
Preference number: 6 (lower is better)
Translates to: PVPCSSTYFFFGARD*NVAVLRLSEGSQRP
Trigger: AGGCCGCTGGGAGCCCTCACTCAGTCGCAAGACAGCCACATTCAAGTCTCGGGCCCCGAAGAAGAAATATGTGGAGGAGCATGGCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS CAA 90 bp TCCCCCTCCTCGCAGCGAGTCCCCAGGTTGCTACCAAAGCTGATGTaGGAGACCTCAGCATCCTCAGGTTGCTTGGGCTCCACGGAAGAA +
Preference number: 6 (lower is better)
Translates to: SPSSQRVPRLLPKLM*ETSASSGCLGSTEE
Trigger: TTCTTCCGTGGAGCCCAAGCAACCTGAGGATGCTGAGGTCTCCAACATCAGCTTTGGTAGCAACCTGGGGACTCGCTGCGAGGAGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 90 bp TTGCTACCAAAGCTGATGTTGGAGACCTCAGCATCCTCAGGTTGCTaGGGCTCCACGGAAGAAGGACAAGGAGGCAAAGCGGGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: LLPKLMLETSASSGC*GSTEEGQGGKAGPG
Trigger: GCCTGGGCCCGCTTTGCCTCCTTGTCCTTCTTCCGTGGAGCCCAAGCAACCTGAGGATGCTGAGGTCTCCAACATCAGCTTTGGTAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 90 bp CAGGTTGCTACCAAAGCTGATGTTGGAGACCTCAGCATCCTCAGGTaGCTTGGGCTCCACGGAAGAAGGACAAGGAGGCAAAGCGGGCCC +
Preference number: 6 (lower is better)
Translates to: QVATKADVGDLSILR*LGLHGRRTRRQSGP
Trigger: GGGCCCGCTTTGCCTCCTTGTCCTTCTTCCGTGGAGCCCAAGCAACCTGAGGATGCTGAGGTCTCCAACATCAGCTTTGGTAGCAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 72 bp GCACATCCTCTGTCTCAGTACCTGTGCGGTCAAAGGTaGAGATGTCCCCCTCGCACTTGGCACTCTTGGGGG +
Preference number: 6 (lower is better)
Translates to: AHPLSQYLCGQR*RCPPRTWHSWG
Trigger: CCCCCAAGAGTGCCAAGTGCGAGGGGGACATCTTCACCTTTGACCGCACAGGTACTGAGACAGAGGATGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS TCA 72 bp GTGGCGGCTGCGAACAGCAGTGCGTTGGATGACAGGTaGGGCATTTATGGGGCTGAAATTGGCAGGGCGGAA +
Preference number: 6 (lower is better)
Translates to: VAAANSSALDDR*GIYGAEIGRAE
Trigger: TTCCGCCCTGCCAATTTCAGCCCCATAAATGCCTCACCTGTCATCCAACGCACTGCTGTTCGCAGCCGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS GCA 72 bp TGGGCTCTGAGCTGCAGCTCGAACGTCTCCTCATCTTaGGCTTGGGTGAGGTGGGATCTTCAGGTGCTGAGT +
Preference number: 6 (lower is better)
Translates to: WALSCSSNVSSS*AWVRWDLQVLS
Trigger: ACTCAGCACCTGAAGATCCCACCTCACCCAAGCGCAAGATGAGGAGACGTTCGAGCTGCAGCTCAGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS GCA 72 bp TTCATGCAGCCATCCCGAGAGCACAGCCGGCGCCACTaGTTGCCATTGAACTTCTTTCGGATGCCATTGGGC +
Preference number: 6 (lower is better)
Translates to: FMQPSREHSRRH*LPLNFFRMPLG
Trigger: GCCCAATGGCATCCGAAAGAAGTTCAATGGCAAGCAGTGGCGCCGGCTGTGCTCTCGGGATGGCTGCATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp AAACTGAACAGCAGGCGATGCAGGAGCCCCATAGCCTaGGGTGCCTACCAGCAAGTTGGTGACAGTAGCAGG +
Preference number: 6 (lower is better)
Translates to: KLNSRRCRSPIA*GAYQQVGDSSR
Trigger: CCTGCTACTGTCACCAACTTGCTGGTAGGCACCCCAGGCTATGGGGCTCCTGCATCGCCTGCTGTTCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CCA 72 bp CTGGCGCTCAGGTGGCGGCTGCGAACAGCAGTGCGTTaGATGACAGGTGAGGCATTTATGGGGCTGAAATTG +
Preference number: 6 (lower is better)
Translates to: LALRWRLRTAVR*MTGEAFMGLKL
Trigger: CAATTTCAGCCCCATAAATGCCTCACCTGTCATCCAACGCACTGCTGTTCGCAGCCGCCACCTGAGCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 72 bp GTCTTCTTCAGGGGTGGGGGCCGCACCTTCATCTTCTaGCCAGAACTAGTGACTTCCTTGCGCTCGGGTGTG +
Preference number: 6 (lower is better)
Translates to: VFFRGGGRTFIF*PELVTSLRSGV
Trigger: CACACCCGAGCGCAAGGAAGTCACTAGTTCTGGCAAGAAGATGAAGGTGCGGCCCCCACCCCTGAAGAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS CAA 72 bp TTGGGCTCTGAGCTGCAGCTCGAACGTCTCCTCATCTaGCGCTTGGGTGAGGTGGGATCTTCAGGTGCTGAG +
Preference number: 6 (lower is better)
Translates to: LGSELQLERLLI*RLGEVGSSGAE
Trigger: CTCAGCACCTGAAGATCCCACCTCACCCAAGCGCAAGATGAGGAGACGTTCGAGCTGCAGCTCAGAGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS CAA 72 bp TCGCAGCGAGTCCCCAGGTTGCTACCAAAGCTGATGTaGGAGACCTCAGCATCCTCAGGTTGCTTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: SQRVPRLLPKLM*ETSASSGCLGS
Trigger: GGAGCCCAAGCAACCTGAGGATGCTGAGGTCTCCAACATCAGCTTTGGTAGCAACCTGGGGACTCGCTGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 72 bp CGTTGGATGACAGGTGAGGCATTTATGGGGCTGAAATaGGCAGGGCGGAAGCCAAAGAGCGGCGAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: RWMTGEAFMGLK*AGRKPKSGEGE
Trigger: CTCACCCTCGCCGCTCTTTGGCTTCCGCCCTGCCAATTTCAGCCCCATAAATGCCTCACCTGTCATCCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 72 bp GAGCTGGTGGGCCCATATGAGGTCACTGTTCCAGTCTaGCTGCATGCAGAACTGGTGCCTAGAGGCAGAGTG +
Preference number: 6 (lower is better)
Translates to: ELVGPYEVTVPV*LHAELVPRGRV
Trigger: CACTCTGCCTCTAGGCACCAGTTCTGCATGCAGTCAGACTGGAACAGTGACCTCATATGGGCCCACCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS GCA 72 bp TGGTGGGCCCATATGAGGTCACTGTTCCAGTCTGACTaGATGCAGAACTGGTGCCTAGAGGCAGAGTGTGCC +
Preference number: 6 (lower is better)
Translates to: WWAHMRSLFQSD*MQNWCLEAECA
Trigger: GGCACACTCTGCCTCTAGGCACCAGTTCTGCATGCAGTCAGACTGGAACAGTGACCTCATATGGGCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CCA 72 bp CTCCCTGGAACCTTGGTGTCCGAGCTCAAAAGTGTCTaGGCAGCAACAGACAGGAGCTCAGAAGACACCCCA +
Preference number: 6 (lower is better)
Translates to: LPGTLVSELKSV*AATDRSSEDTP
Trigger: TGGGGTGTCTTCTGAGCTCCTGTCTGTTGCTGCCCAGACACTTTTGAGCTCGGACACCAAGGTTCCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CCA 72 bp GGCGGACCTCTCGGATCTTTAATTGCAGACACACCTTaGATGGGAAGATGTCTGCGTAGCGGGCCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: GGPLGSLIADTP*MGRCLRSGPGR
Trigger: CCTTCCAGGCCCGCTACGCAGACATCTTCCCATCCAAGGTGTGTCTGCAATTAAAGATCCGAGAGGTCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS CAA 72 bp CCCTTAGGGTCCTCAGTTAGGCCTGGAGTAGGATCATaGGGCTGCAGCTCTGGATGTGTTCCCTCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: PLGSSVRPGVGS*GCSSGCVPSAP
Trigger: TGGAGCTGAGGGAACACATCCAGAGCTGCAGCCCAATGATCCTACTCCAGGCCTAACTGAGGACCCTAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS TCA 72 bp TGTGCCCATTTCAGTCCTGGCACCTGCTATGTCATTTaGAGATGCCTCAGCCCGACCAGAGGTGGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: CAHFSPGTCYVI*RCLSPTRGGKG
Trigger: CCCTTTCCCACCTCTGGTCGGGCTGAGGCATCTTCAAATGACATAGCAGGTGCCAGGACTGAAATGGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS GCA 72 bp TCAGGGGCTCCTACCACACCAACATTTCCAGTGCCATaGTCCTCCACATATTTCTTCTTCGGGGCCCGAGAC +
Preference number: 6 (lower is better)
Translates to: SGAPTTPTFPVP*SSTYFFFGARD
Trigger: GTCTCGGGCCCCGAAGAAGAAATATGTGGAGGAGCATGGCACTGGAAATGTTGGTGTGGTAGGAGCCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS GCA 72 bp TTCCACACAAGTGCAGACAGCCGTGCCCACCATCAGTaGACCTGGAGGTGGTGTGACATCCAAAACAACGTC +
Preference number: 6 (lower is better)
Translates to: FHTSADSRAHHQ*TWRWCDIQNNV
Trigger: GACGTTGTTTTGGATGTCACACCACCTCCAGGTGCACTGATGGTGGGCACGGCTGTCTGCACTTGTGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp CCAGGGCTAATGGGCACAGTAAAGGTTAGGTTGGTCTaGAAGGTGGGTAGGATGCCAGAGGAATGGCGCTCA +
Preference number: 6 (lower is better)
Translates to: PGLMGTVKVRLV*KVGRMPEEWRS
Trigger: TGAGCGCCATTCCTCTGGCATCCTACCCACCTTCCAGACCAACCTAACCTTTACTGTGCCCATTAGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 72 bp TGCTCCTCCACATATTTCTTCTTCGGGGCCCGAGACTaGAATGTGGCTGTCTTGCGACTGAGTGAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: CSSTYFFFGARD*NVAVLRLSEGS
Trigger: GGAGCCCTCACTCAGTCGCAAGACAGCCACATTCAAGTCTCGGGCCCCGAAGAAGAAATATGTGGAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169266.8
ENSMUST00000169392.2
CDS CAA 72 bp AAGCTGATGTTGGAGACCTCAGCATCCTCAGGTTGCTaGGGCTCCACGGAAGAAGGACAAGGAGGCAAAGCG +
Preference number: 6 (lower is better)
Translates to: KLMLETSASSGC*GSTEEGQGGKA
Trigger: CGCTTTGCCTCCTTGTCCTTCTTCCGTGGAGCCCAAGCAACCTGAGGATGCTGAGGTCTCCAACATCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CAA 72 bp CGCCACTGCTTGCCATTGAACTTCTTTCGGATGCCATaGGGCGTGCAGACCACGTCGCCCTTCTTGTACTTC +
Preference number: 6 (lower is better)
Translates to: RHCLPLNFFRMP*GVQTTSPFLYF
Trigger: GAAGTACAAGAAGGGCGACGTGGTCTGCACGCCCAATGGCATCCGAAAGAAGTTCAATGGCAAGCAGTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS TCA 72 bp GAGGCAGAGTGTGCCCACCTGCTGACTGTACATAGGTaGTTCTTGTGGAAGAGGGCAACAGGACCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: EAECAHLLTVHR*FLWKRATGPSE
Trigger: CTCAGAAGGTCCTGTTGCCCTCTTCCACAAGAATCACCTATGTACAGTCAGCAGGTGGGCACACTCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS GCA 72 bp TGCGGGGCCAGAAACCATCTGGGTCAGTTCTTGAAGTaGTTGGCTGTCTACTTCCCCACCATCAAGACTGTG +
Preference number: 6 (lower is better)
Translates to: CGARNHLGQFLK*LAVYFPTIKTV
Trigger: CACAGTCTTGATGGTGGGGAAGTAGACAGCCAAGCACTTCAAGAACTGACCCAGATGGTTTCTGGCCCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CCA 72 bp GACCTTGTCCACAGAGTCAAAGGTCTTCTTCAGGGGTaGGGGCCGCACCTTCATCTTCTTGCCAGAACTAGT +
Preference number: 6 (lower is better)
Translates to: DLVHRVKGLLQG*GPHLHLLARTS
Trigger: ACTAGTTCTGGCAAGAAGATGAAGGTGCGGCCCCCACCCCTGAAGAAGACCTTTGACTCTGTGGACAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000005578.13
ENSMUST00000169266.8
CDS CCA 72 bp GTGAGGTGGGATCTTCAGGTGCTGAGTCTAGGTCCGTaGAATTCTTCCTCTTCTTTCGGTAGGAGCCGAGGA +
Preference number: 6 (lower is better)
Translates to: VRWDLQVLSLGP*NSSSSFGRSRG
Trigger: TCCTCGGCTCCTACCGAAAGAAGAGGAAGAATTCCACGGACCTAGACTCAGCACCTGAAGATCCCACCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000169266.8
CDS CCA 72 bp CCTGTTGTCCACAGAGTCAAAGGTCTTCTTCAGGGGTaGGGGCCGCACCTTCATCTTCTTGCCAGAACTAGT +
Preference number: 6 (lower is better)
Translates to: PVVHRVKGLLQG*GPHLHLLARTS
Trigger: ACTAGTTCTGGCAAGAAGATGAAGGTGCGGCCCCCACCCCTGAAGAAGACCTTTGACTCTGTGGACAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163320.8
CDS CAA 72 bp ACCAAAGCTGATGTTGGAGACCTCAGCATCCTCAGGTaGCTTGGGCTCCACGGAAGAAGGACAAGGAGGCAA +
Preference number: 6 (lower is better)
Translates to: TKADVGDLSILR*LGLHGRRTRRQ
Trigger: TTGCCTCCTTGTCCTTCTTCCGTGGAGCCCAAGCAACCTGAGGATGCTGAGGTCTCCAACATCAGCTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169266.8
CDS CCA 72 bp GGACTTCTTTCGGTCCTTGTTGCACCATTTCCAATCTaGGTGGGCCTTGAAGTGGGCCTCTTTCACCTGGAA +
Preference number: 6 (lower is better)
Translates to: GLLSVLVAPFPI*VGLEVGLFHLE
Trigger: TTCCAGGTGAAAGAGGCCCACTTCAAGGCCCACCCAGATTGGAAATGGTGCAACAAGGACCGAAAGAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CCA 72 bp AGGCCACTAGGTGTGCTCACAGGCACAGGAGTCAGCTaGATAATCTTGCTAGGTTGTTGGGCACCATTTTGG +
Preference number: 6 (lower is better)
Translates to: RPLGVLTGTGVS*IILLGCWAPFW
Trigger: CCAAAATGGTGCCCAACAACCTAGCAAGATTATCCAGCTGACTCCTGTGCCTGTGAGCACACCTAGTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS TCA 72 bp TATGATGCGGGGCCAGAAACCATCTGGGTCAGTTCTTaGAGTGCTTGGCTGTCTACTTCCCCACCATCAAGA +
Preference number: 6 (lower is better)
Translates to: YDAGPETIWVSS*SAWLSTSPPSR
Trigger: TCTTGATGGTGGGGAAGTAGACAGCCAAGCACTTCAAGAACTGACCCAGATGGTTTCTGGCCCCGCATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CCA 72 bp GGCACAGGAGTCAGCTGGATAATCTTGCTAGGTTGTTaGGCACCATTTTGGACAGGTACTGAGAAAGGCGAG +
Preference number: 6 (lower is better)
Translates to: GTGVSWIILLGC*APFWTGTEKGE
Trigger: CTCGCCTTTCTCAGTACCTGTCCAAAATGGTGCCCAACAACCTAGCAAGATTATCCAGCTGACTCCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8
CDS CCA 72 bp ATAAAGGTCCAGCTACCAAATGTGGAGCTGGCGAGGTaGCTGCTGCTGCTGACTTCTTATCTGAATACACTA +
Preference number: 6 (lower is better)
Translates to: IKVQLPNVELAR*LLLLTSYLNTL
Trigger: TAGTGTATTCAGATAAGAAGTCAGCAGCAGCAGCCACCTCGCCAGCTCCACATTTGGTAGCTGGACCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000005578.13
ENSMUST00000163320.8
ENSMUST00000165239.3
ENSMUST00000169266.8