Pregenerated sensors for CIB3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074240

Ensembl transcript IDs: ENSMUST00000098630.5, ENSMUST00000238973.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CTGGCATGCTGCCAATCAGTTCATAGGGCACCTTCACCTTGGGACTaGTCGTGTAGTCAAGAGGCACCAACTGAGGGGCCAGGTCCTGGT	+
Preference number: 5 (lower is better) Translates to: LACCQSVHRAPSPWD*SCSQEAPTEGPGPG Trigger: ACCAGGACCTGGCCCCTCAGTTGGTGCCTCTTGACTACACGACCAGTCCCAAGGTGAAGGTGCCCTATGAACTGATTGGCAGCATGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS CCA 90 bp	TCAGCTCTGGCATGCTGCCAATCAGTTCATAGGGCACCTTCACCTTaGGACTGGTCGTGTAGTCAAGAGGCACCAACTGAGGGGCCAGGT	+
Preference number: 5 (lower is better) Translates to: SALACCQSVHRAPSP*DWSCSQEAPTEGPG Trigger: ACCTGGCCCCTCAGTTGGTGCCTCTTGACTACACGACCAGTCCCAAGGTGAAGGTGCCCTATGAACTGATTGGCAGCATGCCAGAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS GCA 90 bp	ATTTTGGAAGTCCTCCAGGGACAGTCGCCCGTCTTGGTCTCCATCTaGTTCATCCAGCACCTTCTCACAGACCAGGGTCACTTCCTCAGC	+
Preference number: 5 (lower is better) Translates to: ILEVLQGQSPVLVSI*FIQHLLTDQGHFLS Trigger: GCTGAGGAAGTGACCCTGGTCTGTGAGAAGGTGCTGGATGAAGCAGATGGAGACCAAGACGGGCGACTGTCCCTGGAGGACTTCCAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS CCA 90 bp	CGCAGGATCATATTTTGGAAGTCCTCCAGGGACAGTCGCCCGTCTTaGTCTCCATCTGCTTCATCCAGCACCTTCTCACAGACCAGGGTC	+
Preference number: 5 (lower is better) Translates to: RRIIFWKSSRDSRPS*SPSASSSTFSQTRV Trigger: GACCCTGGTCTGTGAGAAGGTGCTGGATGAAGCAGATGGAGACCAAGACGGGCGACTGTCCCTGGAGGACTTCCAAAATATGATCCTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS GCA 90 bp	GCGCAATTCTCTGGCGGAAAGGGTTATCCTTCAGCTCTGGCATGCTaGCAATCAGTTCATAGGGCACCTTCACCTTGGGACTGGTCGTGT	+
Preference number: 5 (lower is better) Translates to: AQFSGGKGYPSALAC*QSVHRAPSPWDWSC Trigger: ACACGACCAGTCCCAAGGTGAAGGTGCCCTATGAACTGATTGGCAGCATGCCAGAGCTGAAGGATAACCCTTTCCGCCAGAGAATTGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS TCA 90 bp	TCACTCATCACTGAGAACATATCCAAGAAATTCTCTAAGGTCATGTaGCCATCCCCATCTTGCGAGAAGACCTGCGCAATTCTCTGGCGG	+
Preference number: 5 (lower is better) Translates to: SLITENISKKFSKVM*PSPSCEKTCAILWR Trigger: CCGCCAGAGAATTGCGCAGGTCTTCTCGCAAGATGGGGATGGTCACATGACCTTAGAGAATTTCTTGGATATGTTCTCAGTGATGAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS GCA 72 bp	GTCCTCCAGGGACAGTCGCCCGTCTTGGTCTCCATCTaGTTCATCCAGCACCTTCTCACAGACCAGGGTCAC	+
Preference number: 6 (lower is better) Translates to: VLQGQSPVLVSI*FIQHLLTDQGH Trigger: GTGACCCTGGTCTGTGAGAAGGTGCTGGATGAAGCAGATGGAGACCAAGACGGGCGACTGTCCCTGGAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS CCA 72 bp	TGCCAATCAGTTCATAGGGCACCTTCACCTTGGGACTaGTCGTGTAGTCAAGAGGCACCAACTGAGGGGCCA	+
Preference number: 6 (lower is better) Translates to: CQSVHRAPSPWD*SCSQEAPTEGP Trigger: TGGCCCCTCAGTTGGTGCCTCTTGACTACACGACCAGTCCCAAGGTGAAGGTGCCCTATGAACTGATTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS CCA 72 bp	CCATCCCCATCTTGCGAGAAGACCTGCGCAATTCTCTaGCGGAAAGGGTTATCCTTCAGCTCTGGCATGCTG	+
Preference number: 6 (lower is better) Translates to: PSPSCEKTCAIL*RKGLSFSSGML Trigger: CAGCATGCCAGAGCTGAAGGATAACCCTTTCCGCCAGAGAATTGCGCAGGTCTTCTCGCAAGATGGGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS CAA 90 bp	TCGCAGGATCATATTTTGGAAGTCCTCCAGGGACAGTCGCCCGTCTaGGTCTCCATCTGCTTCATCCAGCACCTTCTCACAGACCAGGGT	+
Preference number: 6 (lower is better) Translates to: SQDHILEVLQGQSPV*VSICFIQHLLTDQG Trigger: ACCCTGGTCTGTGAGAAGGTGCTGGATGAAGCAGATGGAGACCAAGACGGGCGACTGTCCCTGGAGGACTTCCAAAATATGATCCTGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS GCA 72 bp	TCTGGCGGAAAGGGTTATCCTTCAGCTCTGGCATGCTaGCAATCAGTTCATAGGGCACCTTCACCTTGGGAC	+
Preference number: 6 (lower is better) Translates to: SGGKGYPSALAC*QSVHRAPSPWD Trigger: GTCCCAAGGTGAAGGTGCCCTATGAACTGATTGGCAGCATGCCAGAGCTGAAGGATAACCCTTTCCGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS CCA 72 bp	GCATGCTGCCAATCAGTTCATAGGGCACCTTCACCTTaGGACTGGTCGTGTAGTCAAGAGGCACCAACTGAG	+
Preference number: 6 (lower is better) Translates to: ACCQSVHRAPSP*DWSCSQEAPTE Trigger: CTCAGTTGGTGCCTCTTGACTACACGACCAGTCCCAAGGTGAAGGTGCCCTATGAACTGATTGGCAGCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS GCA 72 bp	TTCTCTGGCGGAAAGGGTTATCCTTCAGCTCTGGCATaGTGCCAATCAGTTCATAGGGCACCTTCACCTTGG	+
Preference number: 6 (lower is better) Translates to: FSGGKGYPSALA*CQSVHRAPSPW Trigger: CCAAGGTGAAGGTGCCCTATGAACTGATTGGCAGCATGCCAGAGCTGAAGGATAACCCTTTCCGCCAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS CCA 72 bp	ATATTTTGGAAGTCCTCCAGGGACAGTCGCCCGTCTTaGTCTCCATCTGCTTCATCCAGCACCTTCTCACAG	+
Preference number: 6 (lower is better) Translates to: IFWKSSRDSRPS*SPSASSSTFSQ Trigger: CTGTGAGAAGGTGCTGGATGAAGCAGATGGAGACCAAGACGGGCGACTGTCCCTGGAGGACTTCCAAAATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS CAA 72 bp	CATATTTTGGAAGTCCTCCAGGGACAGTCGCCCGTCTaGGTCTCCATCTGCTTCATCCAGCACCTTCTCACA	+
Preference number: 6 (lower is better) Translates to: HILEVLQGQSPV*VSICFIQHLLT Trigger: TGTGAGAAGGTGCTGGATGAAGCAGATGGAGACCAAGACGGGCGACTGTCCCTGGAGGACTTCCAAAATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2
CDS TCA 72 bp	ACTGAGAACATATCCAAGAAATTCTCTAAGGTCATGTaGCCATCCCCATCTTGCGAGAAGACCTGCGCAATT	+
Preference number: 6 (lower is better) Translates to: TENISKKFSKVM*PSPSCEKTCAI Trigger: AATTGCGCAGGTCTTCTCGCAAGATGGGGATGGTCACATGACCTTAGAGAATTTCTTGGATATGTTCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098630.5 ENSMUST00000238973.2