Pregenerated sensors for CIB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037493Ensembl transcript IDs: ENSMUST00000041901.7
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGAACCTTATACAGCTTCACATTGGGAAAGTACGGGGGCGGAGGTaGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATAGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: PNLIQLHIGKVRGRR*YSPALALVKDCIAC Trigger: ACAAGCTATGCAATCTTTTACCAAAGCCAAGGCTGGGCTGTACCACCTCCGCCCCCGTACTTTCCCAATGTGAAGCTGTATAAGGTTCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR-3UTR TCA 90 bp | GGTGGCTGGGGTGTCTGCCCAGCACACGGAAAATCCAGCCTCACCTCTCCCAGTGGAAATGTCCATGGGTaGGAACCCCAGAGGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: GGWGVCPAHGKSSLTSPSGNVHG*EPQRPQ Trigger: CTGTGGCCTCTGGGGTTCTCACCCATGGACATTTCC...ACTGGGAGAGGTGAGGCTGGATTTTCCGTGTGCTGGGCAGACACCCCAGCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR-3UTR CCA 90 bp | CGGGGGCGGAGGTGGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATAGCTTCATCCCTGGGTGGCTaGGGTGTCTGCCCAGCACAC | + |
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Preference number: 2 (lower is better) Translates to: RGRRWYSPALALVKDCIASSLGG*GVCPAH Trigger: GTGTGCTGGGCAGACACCCCAGCCACCCAGGGATGA...AGCTATGCAATCTTTTACCAAAGCCAAGGCTGGGCTGTACCACCTCCGCCCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR-3UTR CCA 90 bp | CGGGGGCGGAGGTGGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATAGCTTTTTGCACTCATCCCTaGGTGGCTGGGGTGTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: RGRRWYSPALALVKDCIAFCTHP*VAGVSA Trigger: GGCAGACACCCCAGCCACCCAGGGATGAGTGCAAAA...AGCTATGCAATCTTTTACCAAAGCCAAGGCTGGGCTGTACCACCTCCGCCCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR-3UTR GCA 90 bp | AGTACGGGGGCGGAGGTGGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATCCCAGGGAAGGGTCCTaGTCTTCACAACCCTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: STGAEVVQPSLGFGKRLHPREGS*SSQPCC Trigger: GCAACAGGGTTGTGAAGAGCAGGACCCTTCCCTGGG...ATGCAATCTTTTACCAAAGCCAAGGCTGGGCTGTACCACCTCCGCCCCCGTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR-3UTR GCA 90 bp | CGGGGGCGGAGGTGGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATAGCTCTTGGAAACCATACCTaGACAGACAGCAGGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: RGRRWYSPALALVKDCIALGNHT*TDSRPE Trigger: CTCTGGCCTGCTGTCTGTGCAGGTATGGTTTCCAAG...AGCTATGCAATCTTTTACCAAAGCCAAGGCTGGGCTGTACCACCTCCGCCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR-3UTR CCA 90 bp | AGTACGGGGGCGGAGGTGGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATCCACAGCTCCTTCCCTaGAGCACTTGGAAACCATAC | + |
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Preference number: 2 (lower is better) Translates to: STGAEVVQPSLGFGKRLHPQLLP*STWKPY Trigger: GTATGGTTTCCAAGTGCTCCAGGGAAGGAGCTGTGG...ATGCAATCTTTTACCAAAGCCAAGGCTGGGCTGTACCACCTCCGCCCCCGTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR-3UTR CCA 90 bp | GCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGTAGTGTTCAAGCTTCCCTGGAGCACTTaGAAACCATACCTGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: AHISDTMSSGRWGGVVFKLPWST*KPYLHR Trigger: TCTGTGCAGGTATGGTTTCCAAGTGCTCCAGGGAAG...CTTGAACACTACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR-3UTR CAA 90 bp | TGCCCAGCACACGGAAAATCCAGCCTCACCTCTCCCAGTGGGTTTTTCTACCTCGGGGAACTACAGGTCTaGAGGGTAGGCCACTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: CPAHGKSSLTSPSGFFYLGELQV*RVGHWG Trigger: CCCCCAGTGGCCTACCCTCAAGACCTGTAGTTCCCC...GAGGTAGAAAAACCCACTGGGAGAGGTGAGGCTGGATTTTCCGTGTGCTGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR GCA 72 bp | CACAGCTCCTTCCCTGGAGCACTTGGAAACCATACCTaGACAGACAGCAGGCCAGAGGATGCAGCTCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: HSSFPGALGNHT*TDSRPEDAALG Trigger: GCCTAGAGCTGCATCCTCTGGCCTGCTGTCTGTGCAGGTATGGTTTCCAAGTGCTCCAGGGAAGGAGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR CCA 72 bp | AGAGCCCTTTGGACCGAACCTTATACAGCTTCACATTaGGAAAGTACGGGGGCGGAGGTGGTACAGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: RALWTEPYTASH*ESTGAEVVQPS Trigger: GCTGGGCTGTACCACCTCCGCCCCCGTACTTTCCCAATGTGAAGCTGTATAAGGTTCGGTCCAAAGGGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR CCA 72 bp | TCAGCACACATAAGTGATACCATGTCATCAGGGAGGTaGGGTGGGGTAGTGTTCAAGACACAGGGGCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: SAHISDTMSSGR*GGVVFKTQGQS Trigger: GCTCTGCCCCTGTGTCTTGAACACTACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR-3UTR CAA 90 bp | CGGGGGCGGAGGTGGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATAGCTTTCTGTTTTCTTTGCTaGGTTGGTTTTTGCACTCAT | + |
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Preference number: 3 (lower is better) Translates to: RGRRWYSPALALVKDCIAFCFLC*VGFCTH Trigger: ATGAGTGCAAAAACCAACCAAGCAAAGAAAACAGAA...AGCTATGCAATCTTTTACCAAAGCCAAGGCTGGGCTGTACCACCTCCGCCCCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| 3UTR CAA 72 bp | GGGTGCGTGAGAGGGCTCACAGGGGAACTACAGGTCTaGAGGGTAGGCCACTGGGGGCCCAGGGAAGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GCVRGLTGELQV*RVGHWGPREGS Trigger: GGACCCTTCCCTGGGCCCCCAGTGGCCTACCCTCAAGACCTGTAGTTCCCCTGTGAGCCCTCTCACGCACCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR GCA 90 bp | ACAGACAGCAGGCCAGAGGATGCAGCTCTAGGCCCCCACGGCCTTGGCAGTGTCCAGCAAAGCCCAGCTTaGCGTCACCATCCAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: TDSRPEDAALGPHGLGSVQQSPA*RHHPGQ Trigger: CTGACCTGGATGGTGACGGCAAGCTGGGCTTTGCTG...GACACTGCCAAGGCCGTGGGGGCCTAGAGCTGCATCCTCTGGCCTGCTGTCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR TCA 90 bp | GGTGGCTGGGGTGTCTGCCCAGCACACGGAAAATCCAGCCTCACCTCTCCCAGTCGGAGCTCCGGCATCTaGATGATGAGGCTCATGGGT | + |
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Preference number: 4 (lower is better) Translates to: GGWGVCPAHGKSSLTSPSRSSGI*MMRLMG Trigger: ACCCATGAGCCTCATCATTCAGATGCCGGAGCTCCG...ACTGGGAGAGGTGAGGCTGGATTTTCCGTGTGCTGGGCAGACACCCCAGCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR TCA 90 bp | GCTCACAGGGGAACTACAGGTCTTGAGGGTAGGCCACTGGGGGCCCAGGGAAGGGAATGTGGAAGGTGCTaGGAAAATCAGGGGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: AHRGTTGLEGRPLGAQGRECGRC*ENQGPW Trigger: CCAAGGCCCCTGATTTTCTCAGCACCTTCCACATTC...CCTTCCCTGGGCCCCCAGTGGCCTACCCTCAAGACCTGTAGTTCCCCTGTGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR CCA 90 bp | GCTCACAGGGGAACTACAGGTCTTGAGGGTAGGCCACTGGGGGCCCAGGGAAGGGAAAATCAGGGGCCTTaGCGATCATGTCCTCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: AHRGTTGLEGRPLGAQGRENQGP*RSCPQS Trigger: ACTTTGAGGACATGATCGCCAAGGCCCCTGATTTTC...CCTTCCCTGGGCCCCCAGTGGCCTACCCTCAAGACCTGTAGTTCCCCTGTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR TCA 90 bp | CACAGCTCCTTCCCTGGAGCACTTGGAAACCATACCTGCACAGACAGCAGGCCAAGGCATAGTTTGCCTTaGGCTCCCGAGGCGCTGATT | + |
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Preference number: 4 (lower is better) Translates to: HSSFPGALGNHTCTDSRPRHSLP*APEALI Trigger: AATCAGCGCCTCGGGAGCTCAAGGCAAACTATGCCT...TGGCCTGCTGTCTGTGCAGGTATGGTTTCCAAGTGCTCCAGGGAAGGAGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR CCA 90 bp | TGCCCAGCACACGGAAAATCCAGCCTCACCTCTCCCAGTGGGTTTTTCTACCTCCCATCGGGACGAGGTTaGGAGCCAGCTCATAGAACC | + |
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Preference number: 4 (lower is better) Translates to: CPAHGKSSLTSPSGFFYLPSGRG*EPAHRT Trigger: GGTTCTATGAGCTGGCTCCCAACCTCGTCCCGATGG...GAGGTAGAAAAACCCACTGGGAGAGGTGAGGCTGGATTTTCCGTGTGCTGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR TCA 90 bp | CGGGGGCGGAGGTGGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATAGCTCCAGCTGCTCTTCAGTaGAGATGGTCTGCTTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RGRRWYSPALALVKDCIAPAALQ*RWSACS Trigger: GGAACAAGCAGACCATCTTCACTGAAGAGCAGCTGG...AGCTATGCAATCTTTTACCAAAGCCAAGGCTGGGCTGTACCACCTCCGCCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR CCA 90 bp | ACGGGGGCGGAGGTGGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATAGCAGGCTCATGGGTACATaGACGATGGGACTCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: TGAEVVQPSLGFGKRLHSRLMGT*TMGLFL Trigger: CAGGAAGAGTCCCATCGTCCATGTACCCATGAGCCT...GCTATGCAATCTTTTACCAAAGCCAAGGCTGGGCTGTACCACCTCCGCCCCCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR TCA 90 bp | TGCCCAGCACACGGAAAATCCAGCCTCACCTCTCCCAGTGGGTTTTTCTACCTCCCACAATCCTCTCTTTaGAGGGATTCTCCCGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: CPAHGKSSLTSPSGFFYLPQSSL*RDSPGA Trigger: AGCTCCGGGAGAATCCCTTCAAAGAGAGGATTGTGG...GAGGTAGAAAAACCCACTGGGAGAGGTGAGGCTGGATTTTCCGTGTGCTGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR CCA 90 bp | ACGGGGGCGGAGGTGGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATAGCTGGGTACATGGACGATaGGACTCTTCCTGTAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TGAEVVQPSLGFGKRLHSWVHGR*DSSCSP Trigger: TGGACTACAGGAAGAGTCCCATCGTCCATGTACCCA...GCTATGCAATCTTTTACCAAAGCCAAGGCTGGGCTGTACCACCTCCGCCCCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR TCA 90 bp | CGGGGGCGGAGGTGGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATAGCTGGTCAGCCTCTTCAATaGCTTTGTCACACACAAGCA | + |
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Preference number: 4 (lower is better) Translates to: RGRRWYSPALALVKDCIAGQPLQ*LCHTQA Trigger: TGCTTGTGTGTGACAAAGTCATTGAAGAGGCTGACC...AGCTATGCAATCTTTTACCAAAGCCAAGGCTGGGCTGTACCACCTCCGCCCCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR TCA 90 bp | ACGGGGGCGGAGGTGGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATAGCGGATGTCCTTCTTATTaGAGAAAGTGCAGTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TGAEVVQPSLGFGKRLHSGCPSY*RKCSPG Trigger: ACCAGGACTGCACTTTCTTCAATAAGAAGGACATCC...GCTATGCAATCTTTTACCAAAGCCAAGGCTGGGCTGTACCACCTCCGCCCCCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR GCA 90 bp | TGCCCAGCACACGGAAAATCCAGCCTCACCTCTCCCAGTGGGTTTTTCTACCTCCAGCTCATAGAACCGTaGATGAAGCTTGAGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: CPAHGKSSLTSPSGFFYLQLIEP*MKLEDV Trigger: GACATCCTCAAGCTTCATGCACGGTTCTATGAGCTG...GAGGTAGAAAAACCCACTGGGAGAGGTGAGGCTGGATTTTCCGTGTGCTGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR CAA 90 bp | GGTGGCTGGGGTGTCTGCCCAGCACACGGAAAATCCAGCCTCACCTCTCCCAGTTCTTCCAACTCAGACTaGGTGAGTCGGGCCAGCGTC | + |
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Preference number: 5 (lower is better) Translates to: GGWGVCPAHGKSSLTSPSSSNSD*VSRASV Trigger: GACGCTGGCCCGACTCACCAAGTCTGAGTTGGAAGA...ACTGGGAGAGGTGAGGCTGGATTTTCCGTGTGCTGGGCAGACACCCCAGCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR CAA 90 bp | GGTGGCTGGGGTGTCTGCCCAGCACACGGAAAATCCAGCCTCACCTCTCCCAGTATGTCCACAAAGTCATaGAAGGTGAGGTTCCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: GGWGVCPAHGKSSLTSPSMSTKS*KVRFPS Trigger: CGAGGGGAACCTCACCTTCAATGACTTTGTGGACAT...ACTGGGAGAGGTGAGGCTGGATTTTCCGTGTGCTGGGCAGACACCCCAGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR CAA 90 bp | GGTGGCTGGGGTGTCTGCCCAGCACACGGAAAATCCAGCCTCACCTCTCCCAGTAGAAAATCAGGGGCCTaGGCGATCATGTCCTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: GGWGVCPAHGKSSLTSPSRKSGA*AIMSSK Trigger: CTTTGAGGACATGATCGCCAAGGCCCCTGATTTTCT...ACTGGGAGAGGTGAGGCTGGATTTTCCGTGTGCTGGGCAGACACCCCAGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR CAA 90 bp | GCTCACAGGGGAACTACAGGTCTTGAGGGTAGGCCACTGGGGGCCCAGGGAAGGAGGATGTCCTTCTTATaGAAGAAAGTGCAGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: AHRGTTGLEGRPLGAQGRRMSFL*KKVQSW Trigger: CCAGGACTGCACTTTCTTCAATAAGAAGGACATCCT...CCTTCCCTGGGCCCCCAGTGGCCTACCCTCAAGACCTGTAGTTCCCCTGTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR CAA 90 bp | TGCCCAGCACACGGAAAATCCAGCCTCACCTCTCCCAGTGGGTTTTTCTACCTCTCCACAATCCTCTCTTaGAAGGGATTCTCCCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: CPAHGKSSLTSPSGFFYLSTILS*KGFSRS Trigger: GCTCCGGGAGAATCCCTTCAAAGAGAGGATTGTGGA...GAGGTAGAAAAACCCACTGGGAGAGGTGAGGCTGGATTTTCCGTGTGCTGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS-3UTR CAA 90 bp | GCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGTAGTGTTCAAGGCCTCTTCAATGACTTaGTCACACACAAGCACTACC | + |
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Preference number: 5 (lower is better) Translates to: AHISDTMSSGRWGGVVFKASSMT*SHTSTT Trigger: GGTAGTGCTTGTGTGTGACAAAGTCATTGAAGAGGC...CTTGAACACTACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS TCA 90 bp | GTCATAGATCTTGAAGGCATAGTTTGCCTTGAGCTCCCGAGGCGCTaGTTCGCAGAGCACAGAGAACATGTCCACAAAGTCATTGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: VIDLEGIVCLELPRR*FAEHREHVHKVIEG Trigger: ACCTTCAATGACTTTGTGGACATGTTCTCTGTGCTCTGCGAATCAGCGCCTCGGGAGCTCAAGGCAAACTATGCCTTCAAGATCTATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS CAA 90 bp | CGAGGCGCTGATTCGCAGAGCACAGAGAACATGTCCACAAAGTCATaGAAGGTGAGGTTCCCCTCGCCATCCTCGGAGAAAGCCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: RGADSQSTENMSTKS*KVRFPSPSSEKAST Trigger: TGTGGAGGCTTTCTCCGAGGATGGCGAGGGGAACCTCACCTTCAATGACTTTGTGGACATGTTCTCTGTGCTCTGCGAATCAGCGCCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS CAA 90 bp | TCAGGGGCCTTGGCGATCATGTCCTCAAAGTCAGCAAAGCCCAGCTaGCCGTCACCATCCAGGTCAGCCTCTTCAATGACTTTGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: SGALAIMSSKSAKPS*PSPSRSASSMTLSH Trigger: GTGTGACAAAGTCATTGAAGAGGCTGACCTGGATGGTGACGGCAAGCTGGGCTTTGCTGACTTTGAGGACATGATCGCCAAGGCCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS TCA 72 bp | CTTGAAGGCATAGTTTGCCTTGAGCTCCCGAGGCGCTaGTTCGCAGAGCACAGAGAACATGTCCACAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: LEGIVCLELPRR*FAEHREHVHKV Trigger: GACTTTGTGGACATGTTCTCTGTGCTCTGCGAATCAGCGCCTCGGGAGCTCAAGGCAAACTATGCCTTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS CAA 72 bp | GATTCGCAGAGCACAGAGAACATGTCCACAAAGTCATaGAAGGTGAGGTTCCCCTCGCCATCCTCGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: DSQSTENMSTKS*KVRFPSPSSEK Trigger: TTTCTCCGAGGATGGCGAGGGGAACCTCACCTTCAATGACTTTGTGGACATGTTCTCTGTGCTCTGCGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS CAA 72 bp | CACACAAGCACTACCTCATCCTCTTCCAACTCAGACTaGGTGAGTCGGGCCAGCGTCATCTCTAAGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: HTSTTSSSSNSD*VSRASVISKSS Trigger: AGAAGACTTAGAGATGACGCTGGCCCGACTCACCAAGTCTGAGTTGGAAGAGGATGAGGTAGTGCTTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS CAA 72 bp | ATTCGAATGTGGAAGGTGCTGAGAAAATCAGGGGCCTaGGCGATCATGTCCTCAAAGTCAGCAAAGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: IRMWKVLRKSGA*AIMSSKSAKPS Trigger: GCTGGGCTTTGCTGACTTTGAGGACATGATCGCCAAGGCCCCTGATTTTCTCAGCACCTTCCACATTCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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| CDS TCA 72 bp | CAAGCACTACCTCATCCTCTTCCAACTCAGACTTGGTaGGTCGGGCCAGCGTCATCTCTAAGTCTTCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: QALPHPLPTQTW*VGPASSLSLLY Trigger: GTAAAGAAGACTTAGAGATGACGCTGGCCCGACTCACCAAGTCTGAGTTGGAAGAGGATGAGGTAGTGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041901.7 |
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