Pregenerated sensors for CIB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030538Ensembl transcript IDs: ENSMUST00000065163.15, ENSMUST00000071457.12, ENSMUST00000123279.8, ENSMUST00000205996.2, ENSMUST00000206084.2, ENSMUST00000206802.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCAGACTCTGCAGCGCCCTCTCCAGGCTGGGCCGGCACTGGCCCTaGCACCGCAGGCATAACCTTGGCCACATCTCAGCAGTGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ARLCSALSRLGRHWP*HRRHNLGHISAVAR Trigger: CCTGGCCACTGCTGAGATGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGAGGGCGCTGCAGAGTCTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| 3UTR GCA 90 bp | TTGAGCTCTGGGAGGCTGAGGATCTGCTCAAACGATACTCGGGTGTaGAGTGACTCCTCCACGGTCCGCTGCTCTGGGGGAAGCAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: LSSGRLRICSNDTRV*SDSSTVRCSGGSSS Trigger: TGAGCTGCTTCCCCCAGAGCAGCGGACCGTGGAGGAGTCACTGCACACCCGAGTATCGTTTGAGCAGATCCTCAGCCTCCCAGAGCTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| 3UTR GCA 90 bp | CGCTCCTTGAAAGGGTTAGCCTTGAGCTCTGGGAGGCTGAGGATCTaGTCAAACGATACTCGGGTGTGCAGTGACTCCTCCACGGTCCGC | + |
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Preference number: 1 (lower is better) Translates to: RSLKGLALSSGRLRI*SNDTRVCSDSSTVR Trigger: GCGGACCGTGGAGGAGTCACTGCACACCCGAGTATCGTTTGAGCAGATCCTCAGCCTCCCAGAGCTCAAGGCTAACCCTTTCAAGGAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| 3UTR GCA 90 bp | TGCTCAAACGATACTCGGGTGTGCAGTGACTCCTCCACGGTCCGCTaGTCTGGGGGAAGCAGCTCACAAAAGCGTCTGTGGGCTCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: CSNDTRVCSDSSTVR*SGGSSSQKRLWALY Trigger: ATAAAGAGCCCACAGACGCTTTTGTGAGCTGCTTCCCCCAGAGCAGCGGACCGTGGAGGAGTCACTGCACACCCGAGTATCGTTTGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| 3UTR TCA 90 bp | CAGGAGGTCCAGGAAGTCCTCAAAGCTCAGGCTGTCTCTGGTAGGTaGTGTGGAGAAGACCATGCAGATTCGCTCCTTGAAAGGGTTAGC | + |
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Preference number: 1 (lower is better) Translates to: QEVQEVLKAQAVSGR*CGEDHADSLLERVS Trigger: GCTAACCCTTTCAAGGAGCGAATCTGCATGGTCTTCTCCACATCACCTACCAGAGACAGCCTGAGCTTTGAGGACTTCCTGGACCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| 3UTR-3UTR CCA 90 bp | GACTCTGCAGCGCCCTCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCGCCACATCTCAGCAGTaGCCAGGTCTTGGACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: DSAAPSPGWAGTGPDTAGATSQQ*PGLGQD Trigger: ATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGC...GCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGAGGGCGCTGCAGAGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| 3UTR CAA 90 bp | TCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTaGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGATGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SPGWAGTGPDTAGIT*ATSQQWPGLGQDVG Trigger: ACCAACATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGACACTCAGGAGGTCCAGGAAGTCCTCAAAGCTCAGGCTGTCTCTGGTAGGTCCTCCACGGTCCGCTaGTCTGGGGGAAGCAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: EDTQEVQEVLKAQAVSGRSSTVR*SGGSSS Trigger: TGAGCTGCTTCCCCCAGAGCAGCGGACCGTGGAGGA...CCTACCAGAGACAGCCTGAGCTTTGAGGACTTCCTGGACCTCCTGAGTGTCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| 3UTR-3UTR CCA 90 bp | AACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCCCTGCCAGGGGGCCACATCTCAGCAGTaGCCAGGTCTTGGACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: NTVMTTAVTRGRVLPCQGATSQQ*PGLGQD Trigger: ATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGC...CCCCTGGCAGGGGAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTGGGAGGCTGAGGATCTGCTCAAACGATACTCGGGTGTGCAGTGACTCCCACGGTCCGCTGCTCTaGGGGAAGCAGCTCACAAAA | + |
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Preference number: 2 (lower is better) Translates to: SSGRLRICSNDTRVCSDSHGPLL*GKQLTK Trigger: TTTTGTGAGCTGCTTCCCCCAGAGCAGCGGACCGTG...GGAGTCACTGCACACCCGAGTATCGTTTGAGCAGATCCTCAGCCTCCCAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| 3UTR CAA 90 bp | GATGTGGAGAAGACCATGCAGATTCGCTCCTTGAAAGGGTTAGCCTaGAGCTCTGGGAGGCTGAGGATCTGCTCAAACGATACTCGGGTG | + |
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Preference number: 2 (lower is better) Translates to: DVEKTMQIRSLKGLA*SSGRLRICSNDTRV Trigger: CACCCGAGTATCGTTTGAGCAGATCCTCAGCCTCCCAGAGCTCAAGGCTAACCCTTTCAAGGAGCGAATCTGCATGGTCTTCTCCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| 3UTR-3UTR CCA 90 bp | GATTCGCTCCTTGAAAGGGTTAGCCTTGAGCTCTGGGAGGCTGAGGATCTGCTCTCACAAAAGCGTCTGTaGGCTCTTTATAATCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: DSLLERVSLELWEAEDLLSQKRL*ALYNLP Trigger: TGGCAGATTATAAAGAGCCCACAGACGCTTTTGTGA...GAGCAGATCCTCAGCCTCCCAGAGCTCAAGGCTAACCCTTTCAAGGAGCGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| 3UTR-3UTR CAA 90 bp | GCGCCCTCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGAGCAGTGGCCAGGTCTaGGACAGGATGTTGGTACTT | + |
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Preference number: 3 (lower is better) Translates to: APSPGWAGTGPDTAGITLSSGQV*DRMLVL Trigger: AAGTACCAACATCCTGTCCAAGACCTGGCCACTGCT...CAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGAGGGCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| 3UTR GCA 72 bp | GATACTCGGGTGTGCAGTGACTCCTCCACGGTCCGCTaGTCTGGGGGAAGCAGCTCACAAAAGCGTCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: DTRVCSDSSTVR*SGGSSSQKRLW Trigger: CCACAGACGCTTTTGTGAGCTGCTTCCCCCAGAGCAGCGGACCGTGGAGGAGTCACTGCACACCCGAGTATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGACACTCAGGAGGTCCAGGAAGTCCTCAAAGCTCAGGCTGTCTCTGGTAGGTTGAAAGGGTTAGCCTaGAGCTCTGGGAGGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: EDTQEVQEVLKAQAVSGRLKGLA*SSGRLR Trigger: CCTCAGCCTCCCAGAGCTCAAGGCTAACCCTTTCAA...CCTACCAGAGACAGCCTGAGCTTTGAGGACTTCCTGGACCTCCTGAGTGTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| 3UTR GCA 72 bp | AAAGGGTTAGCCTTGAGCTCTGGGAGGCTGAGGATCTaGTCAAACGATACTCGGGTGTGCAGTGACTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: KGLALSSGRLRI*SNDTRVCSDSS Trigger: GGAGGAGTCACTGCACACCCGAGTATCGTTTGAGCAGATCCTCAGCCTCCCAGAGCTCAAGGCTAACCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| 3UTR TCA 72 bp | CAGGAAGTCCTCAAAGCTCAGGCTGTCTCTGGTAGGTaGTGTGGAGAAGACCATGCAGATTCGCTCCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QEVLKAQAVSGR*CGEDHADSLLE Trigger: TTCAAGGAGCGAATCTGCATGGTCTTCTCCACATCACCTACCAGAGACAGCCTGAGCTTTGAGGACTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| 3UTR-3UTR CAA 90 bp | TTACCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTAGCAGTGGCCAGGTCTaGGACAGGATGTTGGTACTT | + |
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Preference number: 3 (lower is better) Translates to: LPISKHSDDNSSDKGEGPSSGQV*DRMLVL Trigger: AAGTACCAACATCCTGTCCAAGACCTGGCCACTGCT...AGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR GCA 90 bp | GCGCCCTCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGTCCTCCACGGTCCGCTaGTCTGGGGGAAGCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: APSPGWAGTGPDTAGITLSSTVR*SGGSSS Trigger: TGAGCTGCTTCCCCCAGAGCAGCGGACCGTGGAGGA...CAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGAGGGCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
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| CDS-3UTR TCA 90 bp | TCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGCCACACCTCGCCCTCTCCCGTaGGGCAATTCACAAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SPGWAGTGPDTAGITLATPRPLP*GNSQAG Trigger: GCCAGCTTGTGAATTGCCTCACGGGAGAGGGCGAGG...TGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR CCA 90 bp | TCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGCCACAAGGAACGTCAGGTCCTaGTACTCGGCCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SPGWAGTGPDTAGITLATRNVRS*YSASSS Trigger: GGAGCTGCTGGCCGAGTACCAGGACCTGACGTTCCT...TGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
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| CDS-3UTR CCA 90 bp | GCGCCCTCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGGAGGATCTCCTGCTTaGTCAGGAACGTCAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: APSPGWAGTGPDTAGITLGGSPA*SGTSGP Trigger: AGGACCTGACGTTCCTGACCAAGCAGGAGATCCTCC...CAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGAGGGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
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| CDS-3UTR CCA 90 bp | GACTCTGCAGCGCCCTCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCAGGCAATTCACAAGCTaGCTCAGGTCTTCTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: DSAAPSPGWAGTGPDTAGRQFTS*LRSSLS Trigger: GGACAGAGAAGACCTGAGCCAGCTTGTGAATTGCCT...GCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGAGGGCGCTGCAGAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGCCACATCTCAGCAGAGGAACGTCAGGTCCTaGTACTCGGCCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: WAGTGPDTAGITLATSQQRNVRS*YSASSS Trigger: GGAGCTGCTGGCCGAGTACCAGGACCTGACGTTCCT...CTGCTGAGATGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
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| CDS-3UTR TCA 90 bp | TGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGCCACATCTCAGCAGGCGGAAGGCATAGTGTaGCTTGATGTCTGGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: WAGTGPDTAGITLATSQQAEGIV*LDVWGC Trigger: GCAACCCCAGACATCAAGTCACACTATGCCTTCCGC...CTGCTGAGATGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGCCACATCTCAGCAGGTTAGCCTTGAGCTCTaGGAGGCTGAGGATCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: WAGTGPDTAGITLATSQQVSLEL*EAEDLL Trigger: GAGCAGATCCTCAGCCTCCCAGAGCTCAAGGCTAAC...CTGCTGAGATGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065163.15 |
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| CDS-3UTR TCA 90 bp | TCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGCCACAAGGCATAGTGTGACTTaGTGTCTGGGGTTGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SPGWAGTGPDTAGITLATRHSVT*CLGLLC Trigger: ACACAGCAACCCCAGACATCAAGTCACACTATGCCT...TGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR TCA 90 bp | AACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCCCTGCCAGGGGTCATCTCAGAAGCACTaGGCCGAGTGTCCTCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: NTVMTTAVTRGRVLPCQGSSQKH*AECPRP Trigger: AGGGCGAGGACACTCGGCTCAGTGCTTCTGAGATGA...CCCCTGGCAGGGGAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR TCA 90 bp | GCGCCCTCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGATCCCTGTCAATGTCTaGCTCTTCCAGGATATTGTC | + |
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Preference number: 4 (lower is better) Translates to: APSPGWAGTGPDTAGITLIPVNV*LFQDIV Trigger: GACAATATCCTGGAAGAGTCAGACATTGACAGGGAT...CAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGAGGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR TCA 90 bp | AACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCCCTGCCAGGGGGCTGGCAAAGTCTGGTaGGCGCGAGATGACATGCTG | + |
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Preference number: 4 (lower is better) Translates to: NTVMTTAVTRGRVLPCQGAGKVW*ARDDML Trigger: CAGCATGTCATCTCGCGCTCACCAGACTTTGCCAGC...CCCCTGGCAGGGGAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR GCA 90 bp | GACTCTGCAGCGCCCTCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATATTGTCAATCAGCTaGTTCATCTCAGAAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: DSAAPSPGWAGTGPDTAGILSIS*FISEAL Trigger: CAGTGCTTCTGAGATGAAGCAGCTGATTGACAATAT...GCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGAGGGCGCTGCAGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR TCA 90 bp | TGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGCCACATCTCAGCAGAGGCATAGTGTGACTTaGTGTCTGGGGTTGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: WAGTGPDTAGITLATSQQRHSVT*CLGLLC Trigger: ACACAGCAACCCCAGACATCAAGTCACACTATGCCT...CTGCTGAGATGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR TCA 90 bp | AACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCCCTGCCAGGGGGCGGAAGGCATAGTGTaGCTTGATGTCTGGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: NTVMTTAVTRGRVLPCQGAEGIV*LDVWGC Trigger: GCAACCCCAGACATCAAGTCACACTATGCCTTCCGC...CCCCTGGCAGGGGAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR GCA 90 bp | AACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCCCTGCCAGGGGGCTAGGAGGATCTCCTaGTTGGTCAGGAACGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: NTVMTTAVTRGRVLPCQGARRIS*LVRNVR Trigger: CCTGACGTTCCTGACCAAGCAGGAGATCCTCCTAGC...CCCCTGGCAGGGGAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGCCACATCTCAGCAGAGGCAATTCACAAGCTaGCTCAGGTCTTCTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: WAGTGPDTAGITLATSQQRQFTS*LRSSLS Trigger: GGACAGAGAAGACCTGAGCCAGCTTGTGAATTGCCT...CTGCTGAGATGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR TCA 90 bp | GACACCGCAGGCATAACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGCGGAAGGCATAGTGTaGCTTGATGTCTGGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: DTAGITLATSQQWPGLGQAEGIV*LDVWGC Trigger: GCAACCCCAGACATCAAGTCACACTATGCCTTCCGC...CTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTTATGCCTGCGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR TCA 90 bp | TCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGCCACAATCCCTGTCAATGTCTaGCTCTTCCAGGATATTGTC | + |
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Preference number: 4 (lower is better) Translates to: SPGWAGTGPDTAGITLATIPVNV*LFQDIV Trigger: GACAATATCCTGGAAGAGTCAGACATTGACAGGGAT...TGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR GCA 90 bp | GCGCCCTCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGATATTGTCAATCAGCTaGTTCATCTCAGAAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: APSPGWAGTGPDTAGITLILSIS*FISEAL Trigger: CAGTGCTTCTGAGATGAAGCAGCTGATTGACAATAT...CAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGAGGGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR TCA 90 bp | AACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGATGTTGGTACTTACCTCGCCCTCTCCCGTaGGGCAATTCACAAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: NLGHISAVARSWTGCWYLPRPLP*GNSQAG Trigger: GCCAGCTTGTGAATTGCCTCACGGGAGAGGGCGAGG...TAAGTACCAACATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR TCA 90 bp | AGGCATAACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGATGTTGGGCTGGCAAAGTCTGGTaGGCGCGAGATGACATGCTG | + |
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Preference number: 4 (lower is better) Translates to: RHNLGHISAVARSWTGCWAGKVW*ARDDML Trigger: CAGCATGTCATCTCGCGCTCACCAGACTTTGCCAGC...CCAACATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTTATGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR CCA 90 bp | ATTCGCTCCTTGAAAGGGTTAGCCTTGAGCTCTGGGAGGCTGAGGATCTGCTCAAGGAACGTCAGGTCCTaGTACTCGGCCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IRSLKGLALSSGRLRICSRNVRS*YSASSS Trigger: GGAGCTGCTGGCCGAGTACCAGGACCTGACGTTCCT...TGAGCAGATCCTCAGCCTCCCAGAGCTCAAGGCTAACCCTTTCAAGGAGCGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| CDS-3UTR CCA 90 bp | AGGCATAACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGATGTTGGCACGGTCCGCTGCTCTaGGGGAAGCAGCTCACAAAA | + |
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Preference number: 4 (lower is better) Translates to: RHNLGHISAVARSWTGCWHGPLL*GKQLTK Trigger: TTTTGTGAGCTGCTTCCCCCAGAGCAGCGGACCGTG...CCAACATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTTATGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
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| CDS-3UTR TCA 90 bp | AGGCATAACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGATGTTGGGGGTTGCTGTGTCACTaGAGACACTCAGGAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RHNLGHISAVARSWTGCWGLLCH*RHSGGP Trigger: TGGACCTCCTGAGTGTCTTCAGTGACACAGCAACCC...CCAACATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTTATGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
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| CDS-3UTR GCA 90 bp | GATTCGCTCCTTGAAAGGGTTAGCCTTGAGCTCTGGGAGGCTGAGGATCTGCTCCTCAGGAGGATCTCCTaGTTGGTCAGGAACGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSLLERVSLELWEAEDLLLRRIS*LVRNVR Trigger: CCTGACGTTCCTGACCAAGCAGGAGATCCTCCTGAG...GAGCAGATCCTCAGCCTCCCAGAGCTCAAGGCTAACCCTTTCAAGGAGCGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
||
| CDS-3UTR TCA 90 bp | CCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCCTCATCTCAGAAGCACTaGGCCGAGTGTCCTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PISKHSDDNSSDKGEGPPSSQKH*AECPRP Trigger: AGGGCGAGGACACTCGGCTCAGTGCTTCTGAGATGA...GGGAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR TCA 90 bp | CAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCCCGCTGGCAAAGTCTGGTaGGCGCGAGATGACATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLVNTVMTTAVTRGRVLPAGKVW*ARDDML Trigger: CAGCATGTCATCTCGCGCTCACCAGACTTTGCCAGC...GGGGAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATAACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGATGTTGGTCACAAAAGCGTCTGTaGGCTAGGAGGATCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RHNLGHISAVARSWTGCWSQKRL*ARRISC Trigger: GCAGGAGATCCTCCTAGCCCACAGACGCTTTTGTGA...CCAACATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTTATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
||
| 3UTR CAA 72 bp | GTAGGTGATGTGGAGAAGACCATGCAGATTCGCTCCTaGAAAGGGTTAGCCTTGAGCTCTGGGAGGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGDVEKTMQIRS*KGLALSSGRLR Trigger: CCTCAGCCTCCCAGAGCTCAAGGCTAACCCTTTCAAGGAGCGAATCTGCATGGTCTTCTCCACATCACCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
||
| CDS-3UTR TCA 90 bp | CCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCCGGGTTGCTGTGTCACTaGAGACACTCAGGAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PISKHSDDNSSDKGEGPPGLLCH*RHSGGP Trigger: TGGACCTCCTGAGTGTCTTCAGTGACACAGCAACCC...GGGAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATAACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGATGTTGGAGGCATAGTGTGACTTaGTGTCTGGGGTTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RHNLGHISAVARSWTGCWRHSVT*CLGLLC Trigger: ACACAGCAACCCCAGACATCAAGTCACACTATGCCT...CCAACATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTTATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR TCA 90 bp | TTACCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCTCGCCCTCTCCCGTaGGGCAATTCACAAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPISKHSDDNSSDKGEGPPRPLP*GNSQAG Trigger: GCCAGCTTGTGAATTGCCTCACGGGAGAGGGCGAGG...AGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATAACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGATGTTGGGGAACTCGGAAAGATTaGTGGTCCCATCCCTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RHNLGHISAVARSWTGCWGTRKD*WSHPCQ Trigger: TTGACAGGGATGGGACCATCAATCTTTCCGAGTTCC...CCAACATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTTATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR CCA 90 bp | CCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCCGGAGGATCTCCTGCTTaGTCAGGAACGTCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PISKHSDDNSSDKGEGPPGGSPA*SGTSGP Trigger: AGGACCTGACGTTCCTGACCAAGCAGGAGATCCTCC...GGGAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
||
| CDS-3UTR CCA 90 bp | AACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGATGTTGGTACTTATTGAAAGGGTTAGCCTaGTACTCGGCCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLGHISAVARSWTGCWYLLKGLA*YSASSS Trigger: GGAGCTGCTGGCCGAGTACCAGGCTAACCCTTTCAA...TAAGTACCAACATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071457.12 |
||
| CDS-3UTR CCA 90 bp | AACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGATGTTGGTACTTATCACAAAAGCGTCTGTaGGCTAGGAGGATCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLGHISAVARSWTGCWYLSQKRL*ARRISC Trigger: GCAGGAGATCCTCCTAGCCCACAGACGCTTTTGTGA...TAAGTACCAACATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
||
| CDS-3UTR TCA 90 bp | TTACCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTTCATCTCAGAAGCACTaGGCCGAGTGTCCTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPISKHSDDNSSDKGEGPSSQKH*AECPRP Trigger: AGGGCGAGGACACTCGGCTCAGTGCTTCTGAGATGA...AGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR TCA 90 bp | CCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCCGGAACTCGGAAAGATTaGTGGTCCCATCCCTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PISKHSDDNSSDKGEGPPGTRKD*WSHPCQ Trigger: TTGACAGGGATGGGACCATCAATCTTTCCGAGTTCC...GGGAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR GCA 90 bp | TACCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCGCTAGGAGGATCTCCTaGTTGGTCAGGAACGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YQLVNTVMTTAVTRGRVLARRIS*LVRNVR Trigger: CCTGACGTTCCTGACCAAGCAGGAGATCCTCCTAGC...GAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
||
| CDS-3UTR CCA 90 bp | TTACCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCACGGTCCGCTGCTCTaGGGGAAGCAGCTCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPISKHSDDNSSDKGEGPHGPLL*GKQLTK Trigger: TTTTGTGAGCTGCTTCCCCCAGAGCAGCGGACCGTG...AGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
||
| CDS-3UTR CCA 90 bp | CCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCCAGGCAATTCACAAGCTaGCTCAGGTCTTCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PISKHSDDNSSDKGEGPPRQFTS*LRSSLS Trigger: GGACAGAGAAGACCTGAGCCAGCTTGTGAATTGCCT...GGGAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR CCA 90 bp | TTACCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTTCGCTCCTTGAGCTCTaGGAGGCTGAGGATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPISKHSDDNSSDKGEGPSLLEL*EAEDLL Trigger: GAGCAGATCCTCAGCCTCCCAGAGCTCAAGGAGCGA...AGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206084.2 |
||
| 3UTR CAA 72 bp | AAGACCATGCAGATTCGCTCCTTGAAAGGGTTAGCCTaGAGCTCTGGGAGGCTGAGGATCTGCTCAAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: KTMQIRSLKGLA*SSGRLRICSND Trigger: ATCGTTTGAGCAGATCCTCAGCCTCCCAGAGCTCAAGGCTAACCCTTTCAAGGAGCGAATCTGCATGGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
||
| CDS-3UTR TCA 90 bp | TTACCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTGGAACTCGGAAAGATTaGTGGTCCCATCCCTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPISKHSDDNSSDKGEGPGTRKD*WSHPCQ Trigger: TTGACAGGGATGGGACCATCAATCTTTCCGAGTTCC...AGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR TCA 90 bp | TACCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCATCCCTGTCAATGTCTaGCTCTTCCAGGATATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YQLVNTVMTTAVTRGRVLIPVNV*LFQDIV Trigger: GACAATATCCTGGAAGAGTCAGACATTGACAGGGAT...GAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR CAA 90 bp | GACTCTGCAGCGCCCTCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCTGGAACTCGGAAAGATaGATGGTCCCATCCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DSAAPSPGWAGTGPDTAGWNSER*MVPSLS Trigger: TGACAGGGATGGGACCATCAATCTTTCCGAGTTCCA...GCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGAGGGCGCTGCAGAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR CAA 90 bp | GCGCCCTCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGATGCAGATTCGCTCCTaGAAAGGGTTAGCCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: APSPGWAGTGPDTAGITLMQIRS*KGLALS Trigger: GCTCAAGGCTAACCCTTTCAAGGAGCGAATCTGCAT...CAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGAGGGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065163.15 |
||
| CDS-3UTR CAA 90 bp | TGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGCCACATCTCAGCAGATGCAGATTCGCTCCTaGAGCTCTGGGAGGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WAGTGPDTAGITLATSQQMQIRS*SSGRLR Trigger: CCTCAGCCTCCCAGAGCTCAAGGAGCGAATCTGCAT...CTGCTGAGATGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206084.2 |
||
| CDS GCA 90 bp | TGCTCAAACGATACTCGGGTGTGCAGTGACTCCTCCACGGTCCGCTaGTCTGGGGGAAGCAGCTCACAAAAGCGTCTGTGGGCTAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSNDTRVCSDSSTVR*SGGSSSQKRLWARR Trigger: CCTCCTAGCCCACAGACGCTTTTGTGAGCTGCTTCCCCCAGAGCAGCGGACCGTGGAGGAGTCACTGCACACCCGAGTATCGTTTGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGGCTGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGCCACATGGAACTCGGAAAGATaGATGGTCCCATCCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPGWAGTGPDTAGITLATWNSER*MVPSLS Trigger: TGACAGGGATGGGACCATCAATCTTTCCGAGTTCCA...TGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCAGCCTGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS GCA 90 bp | TGTCTCCTCTCTATCCAGAGGCAGTCCTTTCTCAGGAGGATCTCCTaGTTGGTCAGGAACGTCAGGTCCTGGTACTCGGCCAGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLLSIQRQSFLRRIS*LVRNVRSWYSASSS Trigger: GGAGCTGCTGGCCGAGTACCAGGACCTGACGTTCCTGACCAAGCAGGAGATCCTCCTGAGAAAGGACTGCCTCTGGATAGAGAGGAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
||
| CDS GCA 90 bp | AAGACCATGCAGATTCGCTCCTTGAGCTCTGGGAGGCTGAGGATCTaGTCAAACGATACTCGGGTGTGCAGTGACTCCTCCACGGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KTMQIRSLSSGRLRI*SNDTRVCSDSSTVR Trigger: GCGGACCGTGGAGGAGTCACTGCACACCCGAGTATCGTTTGAGCAGATCCTCAGCCTCCCAGAGCTCAAGGAGCGAATCTGCATGGTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206084.2 |
||
| CDS-3UTR CAA 90 bp | GACACCGCAGGCATAACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGTTGAAAGGGTTAGCCTaGAGCTCTGGGAGGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DTAGITLATSQQWPGLGQLKGLA*SSGRLR Trigger: CCTCAGCCTCCCAGAGCTCAAGGCTAACCCTTTCAA...CTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTTATGCCTGCGGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065163.15 |
||
| CDS CCA 90 bp | CTGAGCCGAGTGTCCTCGCCCTCTCCCGTGAGGCAATTCACAAGCTaGCTCAGGTCTTCTCTGTCCAGGGTTCCATCGTCATCAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSRVSSPSPVRQFTS*LRSSLSRVPSSSKS Trigger: TGACTTTGATGACGATGGAACCCTGGACAGAGAAGACCTGAGCCAGCTTGTGAATTGCCTCACGGGAGAGGGCGAGGACACTCGGCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000123279.8 ENSMUST00000205996.2 ENSMUST00000206084.2 |
||
| CDS-3UTR CAA 90 bp | AGGCATAACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGATGTTGGAGGAGGATCTCCTGCTaGGTCAGGAACGTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RHNLGHISAVARSWTGCWRRISC*VRNVRS Trigger: GGACCTGACGTTCCTGACCAAGCAGGAGATCCTCCT...CCAACATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTTATGCCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCCGGCACTGGCCCTGACACCGCAGGCATAACCTTGGCCACATCTCAGCAGGACTCTTCCAGGATATaGTCAATCAGCTGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: WAGTGPDTAGITLATSQQDSSRI*SISCFI Trigger: GATGAAGCAGCTGATTGACAATATCCTGGAAGAGTC...CTGCTGAGATGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS TCA 90 bp | CAGGAGGTCCAGGAAGTCCTCAAAGCTCAGGCTGTCTCTGGTAGGTaGTGTGGAGAAGACCATGCAGATTCGCTCCTTGAGCTCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QEVQEVLKAQAVSGR*CGEDHADSLLELWE Trigger: CTCCCAGAGCTCAAGGAGCGAATCTGCATGGTCTTCTCCACATCACCTACCAGAGACAGCCTGAGCTTTGAGGACTTCCTGGACCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206084.2 |
||
| CDS-3UTR CAA 90 bp | ATTCGCTCCTTGAAAGGGTTAGCCTTGAGCTCTGGGAGGCTGAGGATCTGCTCAAGGAGGATCTCCTGCTaGGTCAGGAACGTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IRSLKGLALSSGRLRICSRRISC*VRNVRS Trigger: GGACCTGACGTTCCTGACCAAGCAGGAGATCCTCCT...TGAGCAGATCCTCAGCCTCCCAGAGCTCAAGGCTAACCCTTTCAAGGAGCGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
||
| CDS-3UTR CAA 90 bp | AACCTTGGCCACATCTCAGCAGTGGCCAGGTCTTGGACAGGATGTTGGTACTTAAGGAGGATCTCCTGCTaGGTCAGGAACGTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLGHISAVARSWTGCWYLRRISC*VRNVRS Trigger: GGACCTGACGTTCCTGACCAAGCAGGAGATCCTCCT...TAAGTACCAACATCCTGTCCAAGACCTGGCCACTGCTGAGATGTGGCCAAGGTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
||
| CDS CCA 90 bp | ATCTTAAAGGAGCTGGCAAAGTCTGGTGAGCGCGAGATGACATGCTaGAACTCGGAAAGATTGATGGTCCCATCCCTGTCAATGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILKELAKSGEREMTC*NSERLMVPSLSMSD Trigger: GTCAGACATTGACAGGGATGGGACCATCAATCTTTCCGAGTTCCAGCATGTCATCTCGCGCTCACCAGACTTTGCCAGCTCCTTTAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS GCA 90 bp | ACAATCTTAAAGGAGCTGGCAAAGTCTGGTGAGCGCGAGATGACATaGTGGAACTCGGAAAGATTGATGGTCCCATCCCTGTCAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TILKELAKSGEREMT*WNSERLMVPSLSMS Trigger: AGACATTGACAGGGATGGGACCATCAATCTTTCCGAGTTCCAGCATGTCATCTCGCGCTCACCAGACTTTGCCAGCTCCTTTAAGATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR CAA 90 bp | CCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTCCCGACTCTTCCAGGATATaGTCAATCAGCTGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: PISKHSDDNSSDKGEGPPDSSRI*SISCFI Trigger: GATGAAGCAGCTGATTGACAATATCCTGGAAGAGTC...GGGAGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR CAA 90 bp | TTACCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTTGGAACTCGGAAAGATaGATGGTCCCATCCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPISKHSDDNSSDKGEGPWNSER*MVPSLS Trigger: TGACAGGGATGGGACCATCAATCTTTCCGAGTTCCA...AGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS-3UTR CAA 90 bp | TTACCAATTAGTAAACACAGTGATGACAACAGCAGTGACAAGGGGGAGGGTCCTGACTCTTCCAGGATATaGTCAATCAGCTGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LPISKHSDDNSSDKGEGPDSSRI*SISCFI Trigger: GATGAAGCAGCTGATTGACAATATCCTGGAAGAGTC...AGGACCCTCCCCCTTGTCACTGCTGTTGTCATCACTGTGTTTACTAATTGGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000206084.2 |
||
| CDS GCA 72 bp | AGCTCACAAAAGCGTCTGTGGGCTAGGAGGATCTCCTaGTTGGTCAGGAACGTCAGGTCCTGGTACTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSQKRLWARRIS*LVRNVRSWYSA Trigger: GGCCGAGTACCAGGACCTGACGTTCCTGACCAAGCAGGAGATCCTCCTAGCCCACAGACGCTTTTGTGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
||
| CDS CCA 72 bp | CACAAAAGCGTCTGTGGGCTAGGAGGATCTCCTGCTTaGTCAGGAACGTCAGGTCCTGGTACTCGGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HKSVCGLGGSPA*SGTSGPGTRPA Trigger: TGCTGGCCGAGTACCAGGACCTGACGTTCCTGACCAAGCAGGAGATCCTCCTAGCCCACAGACGCTTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
||
| CDS CAA 72 bp | TCACAAAAGCGTCTGTGGGCTAGGAGGATCTCCTGCTaGGTCAGGAACGTCAGGTCCTGGTACTCGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SQKRLWARRISC*VRNVRSWYSAS Trigger: GCTGGCCGAGTACCAGGACCTGACGTTCCTGACCAAGCAGGAGATCCTCCTAGCCCACAGACGCTTTTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065163.15 ENSMUST00000206084.2 |
||
| CDS GCA 72 bp | TCTATCCAGAGGCAGTCCTTTCTCAGGAGGATCTCCTaGTTGGTCAGGAACGTCAGGTCCTGGTACTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SIQRQSFLRRIS*LVRNVRSWYSA Trigger: GGCCGAGTACCAGGACCTGACGTTCCTGACCAAGCAGGAGATCCTCCTGAGAAAGGACTGCCTCTGGATAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206802.2 |
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| CDS GCA 72 bp | CAGATTCGCTCCTTGAGCTCTGGGAGGCTGAGGATCTaGTCAAACGATACTCGGGTGTGCAGTGACTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QIRSLSSGRLRI*SNDTRVCSDSS Trigger: GGAGGAGTCACTGCACACCCGAGTATCGTTTGAGCAGATCCTCAGCCTCCCAGAGCTCAAGGAGCGAATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206084.2 |
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| CDS CAA 90 bp | CTGTCTCTGGTAGGTGATGTGGAGAAGACCATGCAGATTCGCTCCTaGAGCTCTGGGAGGCTGAGGATCTGCTCAAACGATACTCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LSLVGDVEKTMQIRS*SSGRLRICSNDTRV Trigger: CACCCGAGTATCGTTTGAGCAGATCCTCAGCCTCCCAGAGCTCAAGGAGCGAATCTGCATGGTCTTCTCCACATCACCTACCAGAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206084.2 |
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| CDS GCA 72 bp | AAGGAGCTGGCAAAGTCTGGTGAGCGCGAGATGACATaGTGGAACTCGGAAAGATTGATGGTCCCATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: KELAKSGEREMT*WNSERLMVPSL Trigger: CAGGGATGGGACCATCAATCTTTCCGAGTTCCAGCATGTCATCTCGCGCTCACCAGACTTTGCCAGCTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000123279.8 ENSMUST00000206084.2 |
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| CDS CCA 72 bp | GAGCTGGCAAAGTCTGGTGAGCGCGAGATGACATGCTaGAACTCGGAAAGATTGATGGTCCCATCCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: ELAKSGEREMTC*NSERLMVPSLS Trigger: TGACAGGGATGGGACCATCAATCTTTCCGAGTTCCAGCATGTCATCTCGCGCTCACCAGACTTTGCCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000123279.8 ENSMUST00000206084.2 |
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| CDS TCA 72 bp | CAGGAAGTCCTCAAAGCTCAGGCTGTCTCTGGTAGGTaGTGTGGAGAAGACCATGCAGATTCGCTCCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: QEVLKAQAVSGR*CGEDHADSLLE Trigger: CTCAAGGAGCGAATCTGCATGGTCTTCTCCACATCACCTACCAGAGACAGCCTGAGCTTTGAGGACTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206084.2 |
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| CDS CAA 72 bp | GGTGAGCGCGAGATGACATGCTGGAACTCGGAAAGATaGATGGTCCCATCCCTGTCAATGTCTGACTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GEREMTCWNSER*MVPSLSMSDSS Trigger: GGAAGAGTCAGACATTGACAGGGATGGGACCATCAATCTTTCCGAGTTCCAGCATGTCATCTCGCGCTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000123279.8 ENSMUST00000206084.2 |
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| CDS CAA 72 bp | GTAGGTGATGTGGAGAAGACCATGCAGATTCGCTCCTaGAGCTCTGGGAGGCTGAGGATCTGCTCAAACGAT | + |
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Preference number: 6 (lower is better) Translates to: VGDVEKTMQIRS*SSGRLRICSND Trigger: ATCGTTTGAGCAGATCCTCAGCCTCCCAGAGCTCAAGGAGCGAATCTGCATGGTCTTCTCCACATCACCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206084.2 |
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| CDS CAA 90 bp | GCAAAGTCTGGTGAGCGCGAGATGACATGCTGGAACTCGGAAAGATaGATGGTCCCATCCCTGTCAATGTCTGACTCTTCCAGGATATTG | + |
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Preference number: 6 (lower is better) Translates to: AKSGEREMTCWNSER*MVPSLSMSDSSRIL Trigger: CAATATCCTGGAAGAGTCAGACATTGACAGGGATGGGACCATCAATCTTTCCGAGTTCCAGCATGTCATCTCGCGCTCACCAGACTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000123279.8 ENSMUST00000206084.2 |
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| CDS TCA 72 bp | ATCGTCATCAAAGTCAAAGATGCGGAAGGCATAGTGTaGCTTGATGTCTGGGGTTGCTGTGTCACTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: IVIKVKDAEGIV*LDVWGCCVTED Trigger: GTCTTCAGTGACACAGCAACCCCAGACATCAAGTCACACTATGCCTTCCGCATCTTTGACTTTGATGACGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065163.15 ENSMUST00000071457.12 ENSMUST00000123279.8 ENSMUST00000205996.2 ENSMUST00000206084.2 |
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