Pregenerated sensors for CIART (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038550Ensembl transcript IDs: ENSMUST00000036418.10, ENSMUST00000159739.8, ENSMUST00000159863.2, ENSMUST00000161866.8, ENSMUST00000161867.8, ENSMUST00000161994.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGCAGCGGATAGGGCCTaGACTGGGCCTGGAACCTCC | + |
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Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWAADRA*TGPGTS Trigger: GGAGGTTCCAGGCCCAGTCCAGGCCCTATCCGCTGC...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGGTGCCTATGGGGCTGTaGCCAGAGGCGGAGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGVPMGL*PEAEPW Trigger: CCAAGGCTCCGCCTCTGGCCACAGCCCCATAGGCAC...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGTGGCTCCAGTGCCTATaGGGCTGTGGCCAGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWWLQCL*GCGQRR Trigger: CCGCCTCTGGCCACAGCCCCATAGGCACTGGAGCCA...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGTGGCTCCAGTGCCTATaGGGCTGTGGCCAGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGWLQCL*GCGQRR Trigger: CCGCCTCTGGCCACAGCCCCATAGGCACTGGAGCCA...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGTCTGGCCTGAGCTCATaGGTGCCCTTGCCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGSGLSS*VPLPSL Trigger: GAGGGAGGGCAAGGGCACCCATGAGCTCAGGCCAGA...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCGCAGCGGATAGGGCCTaGACTGGGCCTGGAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRAAADRA*TGPGTS Trigger: GGAGGTTCCAGGCCCAGTCCAGGCCCTATCCGCTGC...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGCCAGAGGCGGAGCCTTaGGAGCTGAGGGGAGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWPEAEP*ELRGGL Trigger: TAACCCTCCCCTCAGCTCCCAAGGCTCCGCCTCTGG...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGCCAGAGGCGGAGCCTTaGGAGCTGAGGGGAGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGPEAEP*ELRGGL Trigger: TAACCCTCCCCTCAGCTCCCAAGGCTCCGCCTCTGG...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGTGCCTATGGGGCTGTaGCCAGAGGCGGAGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPVPMGL*PEAEPW Trigger: CCAAGGCTCCGCCTCTGGCCACAGCCCCATAGGCAC...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTAGACAGTGGAGTTGGTaGGACCGGAGTGCCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPRQWSW*DRSARG Trigger: GCCCCGGGCACTCCGGTCCCACCAACTCCACTGTCT...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCAGACAGTGGAGTTGGTaGGACCGGAGTGCCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRARQWSW*DRSARG Trigger: GCCCCGGGCACTCCGGTCCCACCAACTCCACTGTCT...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR TCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCCCACAGTGTCTGGCCTaGGCTCATGGGTGCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRAPQCLA*AHGCPC Trigger: GCAAGGGCACCCATGAGCTCAGGCCAGACACTGTGG...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR TCA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGCCGGGGCAGAATGGGTaGAGGGCTGTCCTCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGPGQNG*RAVLLS Trigger: AGAAAGGAGGACAGCCCTTCACCCATTCTGCCCCGG...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR GCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGCAATGCTGGCTCCAGTaGCTATGGGGCTGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWQCWLQ*LWGCGQ Trigger: CTGGCCACAGCCCCATAGGCACTGGAGCCAGCATTG...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTTCTGGCCTGAGCTCATaGGTGCCCTTGCCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPSGLSS*VPLPSL Trigger: GAGGGAGGGCAAGGGCACCCATGAGCTCAGGCCAGA...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGCCGGGGTCACCGTGGTaGCTGGGAAAGTGCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGPGSPW*LGKCLL Trigger: AAGCAAGCACTTTCCCAGCCACCACGGTGACCCCGG...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR TCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCCCGGGGCAGAATGGGTaGAGGGCTGTCCTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRAPGQNG*RAVLLS Trigger: AGAAAGGAGGACAGCCCTTCACCCATTCTGCCCCGG...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR GCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTCAATGCTGGCTCCAGTaGCTATGGGGCTGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPQCWLQ*LWGCGQ Trigger: CTGGCCACAGCCCCATAGGCACTGGAGCCAGCATTG...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTCCGGGGTCACCGTGGTaGCTGGGAAAGTGCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPPGSPW*LGKCLL Trigger: AAGCAAGCACTTTCCCAGCCACCACGGTGACCCCGG...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR TCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTCGGAGCCTTGGGAGCTaGGGGGAGGGTTACAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPRSLGS*GEGYKL Trigger: CAATTTGTAACCCTCCCCTCAGCTCCCAAGGCTCCG...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR TCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCCGGAGCCTTGGGAGCTaGGGGGAGGGTTACAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRARSLGS*GEGYKL Trigger: CAATTTGTAACCCTCCCCTCAGCTCCCAAGGCTCCG...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR GCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCGCTCATGGGTGCCCTTaGCCTCCCTCTCGTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRAAHGCP*PPSRYQ Trigger: CTGATAACGAGAGGGAGGGCAAGGGCACCCATGAGC...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR GCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGCTCATGGGTGCCCTTaGCCTCCCTCTCGTTATCAG | + |
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Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPAHGCP*PPSRYQ Trigger: CTGATAACGAGAGGGAGGGCAAGGGCACCCATGAGC...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR GCA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGGGCTGGGAAAGTGCTTaGTTATCTGGTGCCGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGGWESA*LSGAGY Trigger: GTAGCCGGCACCAGATAAGCAAGCACTTTCCCAGCC...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCGCTGGATCCGGTCCATaGCCACACTCTGTTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRAAGSGP*PHSVGS Trigger: GCTTCCAACAGAGTGTGGCCATGGACCGGATCCAGC...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGCTGGATCCGGTCCATaGCCACACTCTGTTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPAGSGP*PHSVGS Trigger: GCTTCCAACAGAGTGTGGCCATGGACCGGATCCAGC...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGTTACTGGCAAACTGTaGCAACGAGGCTCCTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWVTGKL*QRGSSP Trigger: TGGCGAGGAGCCTCGTTGCCACAGTTTGCCAGTAAC...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR TCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGCAAAGCGACCCATCTTaGGTCCGTTCAGTAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWQSDPS*VRSVGL Trigger: CAGACCTACTGAACGGACTCAAGATGGGTCGCTTTG...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR TCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTTCTGGAGGACAAGGATaGCACCAATGCTGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPSGGQG*HQCWLQ Trigger: CTGGAGCCAGCATTGGTGTCATCCTTGTCCTCCAGA...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR GCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGTGGCTGGGAAAGTaGTTGCTTATCTGGTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRAWWLGK*LLIWCR Trigger: CCGGCACCAGATAAGCAAGCACTTTCCCAGCCACCA...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR GCA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGGGCCATCCAGTGAGATaGCAAGGCTGCTTTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGGHPVR*QGCFGF Trigger: GAAACCAAAGCAGCCTTGGCATCTCACTGGATGGCC...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR GCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGCAGGCGGACATAGGATaGAACTCCAGTCTGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWQADIG*NSSLMA Trigger: TGCCATCAGACTGGAGTTGCATCCTATGTCCGCCTG...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR GCA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGCAGGCGGACATAGGATaGAACTCCAGTCTGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGQADIG*NSSLMA Trigger: TGCCATCAGACTGGAGTTGCATCCTATGTCCGCCTG...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGAAGTGCTTGCTTATCTaGTGCCGGCTACCTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWKCLLI*CRLPPE Trigger: CTCAGGAGGTAGCCGGCACCAGATAAGCAAGCACTT...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGGTGAGGTTCATAGCTaGCCATCCAGTGAGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWGEVHS*PSSEMP Trigger: TGGCATCTCACTGGATGGCCAGCTATGAACCTCACC...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGGGCTGTCCTCCTTTCTaGAGGACAAGGATGACACCA | + |
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Preference number: 4 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGGCPPF*RTRMTP Trigger: TGGTGTCATCCTTGTCCTCCAGAAAGGAGGACAGCC...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGGCTGTCCTCCTTTCTaGAGGACAAGGATGACACCA | + |
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Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWGCPPF*RTRMTP Trigger: TGGTGTCATCCTTGTCCTCCAGAAAGGAGGACAGCC...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGTTACTGGCAAACTGTaGCAACGAGGCTCCTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPVTGKL*QRGSSP Trigger: TGGCGAGGAGCCTCGTTGCCACAGTTTGCCAGTAAC...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR TCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGATGCAACTCCAGTCTaGTGGCAGTGTTACTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWDATPV*WQCYWQ Trigger: TTGCCAGTAACACTGCCATCAGACTGGAGTTGCATC...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR TCA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGGATGCAACTCCAGTCTaGTGGCAGTGTTACTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGDATPV*WQCYWQ Trigger: TTGCCAGTAACACTGCCATCAGACTGGAGTTGCATC...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR GCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCGGCCATCCAGTGAGATaGCAAGGCTGCTTTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRAGHPVR*QGCFGF Trigger: GAAACCAAAGCAGCCTTGGCATCTCACTGGATGGCC...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTAAGTGCTTGCTTATCTaGTGCCGGCTACCTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPKCLLI*CRLPPE Trigger: CTCAGGAGGTAGCCGGCACCAGATAAGCAAGCACTT...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGTGAGGTTCATAGCTaGCCATCCAGTGAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPGEVHS*PSSEMP Trigger: TGGCATCTCACTGGATGGCCAGCTATGAACCTCACC...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR TCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGCTGTTCACCGTCTCTTaGTCTCTTGACTTCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWLFTVS*SLDFRS Trigger: GGATCTGAAGTCAAGAGATCAAGAGACGGTGAACAG...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGTTCACAGAGGACGTaGAAAATGATGGGGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRACSQRT*KMMGRG Trigger: CCCTCTCCCCATCATTTTCCACGTCCTCTGTGAACA...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR TCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGCGTCTCTTGATCTCTTaGCTTCAGATCCTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWRLLIS*LQILAV Trigger: AACAGCAAGGATCTGAAGTCAAGAGATCAAGAGACG...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR TCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGTTCTGGGCAGCTATGTaGGGAAACCAAGTCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWFWAAM*GNQVFN Trigger: GTTAAAGACTTGGTTTCCTCACATAGCTGCCCAGAA...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGATGGCCACACTCTGTTaGAAGCTACTTAATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWMATLC*KLLNPL Trigger: CAGAGGATTAAGTAGCTTCCAACAGAGTGTGGCCAT...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCAGTCATCTGTGGCTCTaGGTGTCCTTTAGTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRASHLWL*VSFSHL Trigger: GAGATGACTAAAGGACACCCAGAGCCACAGATGACT...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR TCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTCGTCTCTTGATCTCTTaGCTTCAGATCCTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPRLLIS*LQILAV Trigger: AACAGCAAGGATCTGAAGTCAAGAGATCAAGAGACG...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR TCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTTTCTGGGCAGCTATGTaGGGAAACCAAGTCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPFWAAM*GNQVFN Trigger: GTTAAAGACTTGGTTTCCTCACATAGCTGCCCAGAA...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR TCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGCAAATTGGAGTGCTATaGATCCAGGTGAGGTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWQIGVL*IQVRFI Trigger: TATGAACCTCACCTGGATTCATAGCACTCCAATTTG...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGCTGTTCCAGATGAGGTaGTGTATGTTGGTTACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGLFQMR*CMLVTR Trigger: TCTAGTAACCAACATACAGCACCTCATCTGGAACAG...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCATGGCCACACTCTGTTaGAAGCTACTTAATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRAMATLC*KLLNPL Trigger: CAGAGGATTAAGTAGCTTCCAACAGAGTGTGGCCAT...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR GCA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCCTGTTCCAGATGAGGTaGTGTATGTTGGTTACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: THKTYIYTNWESGERSRALFQMR*CMLVTR Trigger: TCTAGTAACCAACATACAGCACCTCATCTGGAACAG...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR GCA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGTGAGATGCCAAGGCTaGTTTGGTTTCAAAACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HKTYIYTNWESGERSRAWVRCQG*FGFKTK Trigger: TTTAGTTTTGAAACCAAAGCAGCCTTGGCATCTCAC...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR GCA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGTGAGATGCCAAGGCTaGTTTGGTTTCAAAACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPVRCQG*FGFKTK Trigger: TTTAGTTTTGAAACCAAAGCAGCCTTGGCATCTCAC...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS CCA 90 bp | CTAGGAGAGGTGCAGGAGAAGCAGCCCCGGGGTCACCGTGGTGGCTaGGAAAGTGCTTGCTTATCTGGTGCCGGCTACCTCCTGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGEVQEKQPRGHRGG*ESACLSGAGYLLRM Trigger: CATCCTCAGGAGGTAGCCGGCACCAGATAAGCAAGCACTTTCCCAGCCACCACGGTGACCCCGGGGCTGCTTCTCCTGCACCTCTCCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS CCA 90 bp | ACAGGAGACAGTGGAGTTGGTGGGACCGGAGTGCCCGGGGCAGAATaGGTGAAGGGCTGTCCTCCTTTCTGGAGGACAAGGATGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: TGDSGVGGTGVPGAE*VKGCPPFWRTRMTP Trigger: TGGTGTCATCCTTGTCCTCCAGAAAGGAGGACAGCCCTTCACCCATTCTGCCCCGGGCACTCCGGTCCCACCAACTCCACTGTCTCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
||
| CDS CCA 90 bp | AGGACAAGGATGACACCAATGCTGGCTCCAGTGCCTATGGGGCTGTaGCCAGAGGCGGAGCCTTGGGAGCTGAGGGGAGGGTTACAAATT | + |
|
Preference number: 5 (lower is better) Translates to: RTRMTPMLAPVPMGL*PEAEPWELRGGLQI Trigger: AATTTGTAACCCTCCCCTCAGCTCCCAAGGCTCCGCCTCTGGCCACAGCCCCATAGGCACTGGAGCCAGCATTGGTGTCATCCTTGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS TCA 90 bp | GCGGAGCCTTGGGAGCTGAGGGGAGGGTTACAAATTGGAGTGCTATaGATCCAGGTGAGGTTCATAGCTGGCCATCCAGTGAGATGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AEPWELRGGLQIGVL*IQVRFIAGHPVRCQ Trigger: TTGGCATCTCACTGGATGGCCAGCTATGAACCTCACCTGGATTCATAGCACTCCAATTTGTAACCCTCCCCTCAGCTCCCAAGGCTCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS CCA 90 bp | CATAGGATGCAACTCCAGTCTGATGGCAGTGTTACTGGCAAACTGTaGCAACGAGGCTCCTCGCCAGGCAGTTTCTTCAGATCACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HRMQLQSDGSVTGKL*QRGSSPGSFFRSPG Trigger: CCCTGGTGATCTGAAGAAACTGCCTGGCGAGGAGCCTCGTTGCCACAGTTTGCCAGTAACACTGCCATCAGACTGGAGTTGCATCCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS TCA 90 bp | ATCTGGTGCCGGCTACCTCCTGAGGATGACTTCTGGGCAGCTATGTaGGGAAACCAAGTCTTTAACATCCCTTCCACCTGCAGCAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IWCRLPPEDDFWAAM*GNQVFNIPSTCSKV Trigger: AACCTTGCTGCAGGTGGAAGGGATGTTAAAGACTTGGTTTCCTCACATAGCTGCCCAGAAGTCATCCTCAGGAGGTAGCCGGCACCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 ENSMUST00000161867.8 |
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| CDS CCA 90 bp | TCTGAGGCTTCTGTAAAACACCCACTATGCGCTGGATCCGGTCCATaGCCACACTCTGTTGGAAGCTACTTAATCCTCTGTCAAAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: SEASVKHPLCAGSGP*PHSVGSYLILCQSD Trigger: GTCGCTTTGACAGAGGATTAAGTAGCTTCCAACAGAGTGTGGCCATGGACCGGATCCAGCGCATAGTGGGTGTTTTACAGAAGCCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000159863.2 ENSMUST00000161866.8 ENSMUST00000161867.8 |
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| CDS-3UTR CAA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGGCCAGAGGCGGAGCCTaGGGAGCTGAGGGGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGARGGA*GAEGRV Trigger: AACCCTCCCCTCAGCTCCCAAGGCTCCGCCTCTGGC...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS GCA 90 bp | CTAGATAACGTTCTCCCATCTGAGGCTTCTGTAAAACACCCACTATaGGCTGGATCCGGTCCATGGCCACACTCTGTTGGAAGCTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: LDNVLPSEASVKHPL*AGSGPWPHSVGSYL Trigger: TAAGTAGCTTCCAACAGAGTGTGGCCATGGACCGGATCCAGCGCATAGTGGGTGTTTTACAGAAGCCTCAGATGGGAGAACGTTATCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000159863.2 ENSMUST00000161866.8 ENSMUST00000161867.8 |
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| CDS GCA 90 bp | ATCCAGGTGAGGTTCATAGCTGGCCATCCAGTGAGATGCCAAGGCTaGTTTGGTTTCAAAACTAAATGTCCCAGCTGTGTTTGGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: IQVRFIAGHPVRCQG*FGFKTKCPSCVWPI Trigger: GATGGGCCAAACACAGCTGGGACATTTAGTTTTGAAACCAAAGCAGCCTTGGCATCTCACTGGATGGCCAGCTATGAACCTCACCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS-3UTR CAA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGCCAGAGGCGGAGCCTaGGGAGCTGAGGGGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPARGGA*GAEGRV Trigger: AACCCTCCCCTCAGCTCCCAAGGCTCCGCCTCTGGC...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS TCA 90 bp | CTTGGGTGTTCAGACTCGTCTCCTGTTCACCGTCTCTTGATCTCTTaGCTTCAGATCCTTGCTGTTCCAGATGAGGTGCTGTATGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGCSDSSPVHRLLIS*LQILAVPDEVLYVG Trigger: ACCAACATACAGCACCTCATCTGGAACAGCAAGGATCTGAAGTCAAGAGATCAAGAGACGGTGAACAGGAGACGAGTCTGAACACCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161994.2 |
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| CDS TCA 90 bp | AGTACATCCTTGGGTGTTCAGACTCGTCTCCTGTTCACCGTCTCTTaGTCTCTTGACTTCAGATCCTTGCTGTTCCAGATGAGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: STSLGVQTRLLFTVS*SLDFRSLLFQMRCC Trigger: ACAGCACCTCATCTGGAACAGCAAGGATCTGAAGTCAAGAGATCAAGAGACGGTGAACAGGAGACGAGTCTGAACACCCAAGGATGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161994.2 |
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| CDS-3UTR CAA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGAGCTCATGGGTGCCCTaGCCCTCCCTCTCGTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: HKTYIYTNWESGERSRAWSSWVP*PSLSLS Trigger: TGATAACGAGAGGGAGGGCAAGGGCACCCATGAGCT...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CAA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTAGCTCATGGGTGCCCTaGCCCTCCCTCTCGTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPSSWVP*PSLSLS Trigger: TGATAACGAGAGGGAGGGCAAGGGCACCCATGAGCT...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGTGGCTGGGAAAGTGCTaGCTTATCTGGTGCCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGWLGKC*LIWCRL Trigger: TAGCCGGCACCAGATAAGCAAGCACTTTCCCAGCCA...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS-3UTR CAA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGCTGGGAAAGTGCTaGCTTATCTGGTGCCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: THKTYIYTNWESGERSRAWLGKC*LIWCRL Trigger: TAGCCGGCACCAGATAAGCAAGCACTTTCCCAGCCA...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGGGGGAGGGTTACAAATaGGAGTGCTATGAATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGGEGYK*ECYESR Trigger: CCTGGATTCATAGCACTCCAATTTGTAACCCTCCCC...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGCCGTCTCTTGATCTCTaGACTTCAGATCCTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGPSLDL*TSDPCC Trigger: ACAGCAAGGATCTGAAGTCAAGAGATCAAGAGACGG...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CAA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGGGCCGTATGAACCCTaGGAGTTCTTTACACTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HKTYIYTNWESGERSRAWGPYEP*EFFTLL Trigger: CAAAAGTGTAAAGAACTCCAAGGGTTCATACGGCCC...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGGGGCCGTATGAACCCTaGGAGTTCTTTACACTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: IKHTFIQIGNQGKEAEPGGPYEP*EFFTLL Trigger: CAAAAGTGTAAAGAACTCCAAGGGTTCATACGGCCC...CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CAA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCGGGGAGGGTTACAAATaGGAGTGCTATGAATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: THKTYIYTNWESGERSRAGEGYK*ECYESR Trigger: CCTGGATTCATAGCACTCCAATTTGTAACCCTCCCC...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CAA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCCCGTCTCTTGATCTCTaGACTTCAGATCCTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: THKTYIYTNWESGERSRAPSLDL*TSDPCC Trigger: ACAGCAAGGATCTGAAGTCAAGAGATCAAGAGACGG...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CAA 90 bp | CATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGGGAGTTCTTTACACTTTaGAGCAAAGAGCAGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HKTYIYTNWESGERSRAWEFFTL*SKEQIS Trigger: GGAGATCTGCTCTTTGCTCAAAAGTGTAAAGAACTC...CCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CAA 90 bp | ACACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCGATGCCAAGGCTGCTTaGGTTTCAAAACTAAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: THKTYIYTNWESGERSRADAKAA*VSKLNV Trigger: GACATTTAGTTTTGAAACCAAAGCAGCCTTGGCATC...GGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS-3UTR CAA 90 bp | CACATAAAACATACATTTATACAAATTGGGAATCAGGGGAAAGAAGCAGAGCCTGATGCCAAGGCTGCTTaGGTTTCAAAACTAAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: HIKHTFIQIGNQGKEAEPDAKAA*VSKLNV Trigger: GACATTTAGTTTTGAAACCAAAGCAGCCTTGGCATC...AGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTTTTATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
||
| CDS CCA 72 bp | GTGCAGGAGAAGCAGCCCCGGGGTCACCGTGGTGGCTaGGAAAGTGCTTGCTTATCTGGTGCCGGCTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: VQEKQPRGHRGG*ESACLSGAGYL Trigger: GAGGTAGCCGGCACCAGATAAGCAAGCACTTTCCCAGCCACCACGGTGACCCCGGGGCTGCTTCTCCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
||
| CDS CAA 90 bp | GCAGGAGAAGCAGCCCCGGGGTCACCGTGGTGGCTGGGAAAGTGCTaGCTTATCTGGTGCCGGCTACCTCCTGAGGATGACTTCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: AGEAAPGSPWWLGKC*LIWCRLPPEDDFWA Trigger: TGCCCAGAAGTCATCCTCAGGAGGTAGCCGGCACCAGATAAGCAAGCACTTTCCCAGCCACCACGGTGACCCCGGGGCTGCTTCTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS GCA 72 bp | CAGCCCCGGGGTCACCGTGGTGGCTGGGAAAGTGCTTaGTTATCTGGTGCCGGCTACCTCCTGAGGATGACT | + |
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Preference number: 6 (lower is better) Translates to: QPRGHRGGWESA*LSGAGYLLRMT Trigger: AGTCATCCTCAGGAGGTAGCCGGCACCAGATAAGCAAGCACTTTCCCAGCCACCACGGTGACCCCGGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS GCA 72 bp | GAAGCAGCCCCGGGGTCACCGTGGTGGCTGGGAAAGTaGTTGCTTATCTGGTGCCGGCTACCTCCTGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: EAAPGSPWWLGK*LLIWCRLPPED Trigger: ATCCTCAGGAGGTAGCCGGCACCAGATAAGCAAGCACTTTCCCAGCCACCACGGTGACCCCGGGGCTGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS CCA 72 bp | AGTGGAGTTGGTGGGACCGGAGTGCCCGGGGCAGAATaGGTGAAGGGCTGTCCTCCTTTCTGGAGGACAAGG | + |
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Preference number: 6 (lower is better) Translates to: SGVGGTGVPGAE*VKGCPPFWRTR Trigger: CCTTGTCCTCCAGAAAGGAGGACAGCCCTTCACCCATTCTGCCCCGGGCACTCCGGTCCCACCAACTCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS CCA 72 bp | CTTCAGATCACCAGGGACGACAGGAGACAGTGGAGTTaGTGGGACCGGAGTGCCCGGGGCAGAATGGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LQITRDDRRQWS*WDRSARGRMGE Trigger: TTCACCCATTCTGCCCCGGGCACTCCGGTCCCACCAACTCCACTGTCTCCTGTCGTCCCTGGTGATCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS CCA 72 bp | GGGTCACCGTGGTGGCTGGGAAAGTGCTTGCTTATCTaGTGCCGGCTACCTCCTGAGGATGACTTCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GSPWWLGKCLLI*CRLPPEDDFWA Trigger: TGCCCAGAAGTCATCCTCAGGAGGTAGCCGGCACCAGATAAGCAAGCACTTTCCCAGCCACCACGGTGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS CCA 72 bp | CAGTTTCTTCAGATCACCAGGGACGACAGGAGACAGTaGAGTTGGTGGGACCGGAGTGCCCGGGGCAGAATG | + |
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Preference number: 6 (lower is better) Translates to: QFLQITRDDRRQ*SWWDRSARGRM Trigger: CATTCTGCCCCGGGCACTCCGGTCCCACCAACTCCACTGTCTCCTGTCGTCCCTGGTGATCTGAAGAAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS GCA 72 bp | TCACCGTGGTGGCTGGGAAAGTGCTTGCTTATCTGGTaGCGGCTACCTCCTGAGGATGACTTCTGGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SPWWLGKCLLIW*RLPPEDDFWAA Trigger: AGCTGCCCAGAAGTCATCCTCAGGAGGTAGCCGGCACCAGATAAGCAAGCACTTTCCCAGCCACCACGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS CCA 72 bp | CGGAGCAACTGGGGGATGGCTAGTCATCTGTGGCTCTaGGTGTCCTTTAGTCATCTCTCTGTCTGTGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: RSNWGMASHLWL*VSFSHLSVCGR Trigger: CCTACCACAGACAGAGAGATGACTAAAGGACACCCAGAGCCACAGATGACTAGCCATCCCCCAGTTGCTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 |
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| CDS GCA 72 bp | GTTCTCCCATCTGAGGCTTCTGTAAAACACCCACTATaGGCTGGATCCGGTCCATGGCCACACTCTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: VLPSEASVKHPL*AGSGPWPHSVG Trigger: TCCAACAGAGTGTGGCCATGGACCGGATCCAGCGCATAGTGGGTGTTTTACAGAAGCCTCAGATGGGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000159863.2 ENSMUST00000161866.8 ENSMUST00000161867.8 |
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| CDS TCA 72 bp | TGGGAGCTGAGGGGAGGGTTACAAATTGGAGTGCTATaGATCCAGGTGAGGTTCATAGCTGGCCATCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: WELRGGLQIGVL*IQVRFIAGHPV Trigger: CACTGGATGGCCAGCTATGAACCTCACCTGGATTCATAGCACTCCAATTTGTAACCCTCCCCTCAGCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS CAA 90 bp | TCTCTTGACTTCAGATCCTTGCTGTTCCAGATGAGGTGCTGTATGTaGGTTACTAGAAACCCTGGGTCGATGTCTGCAGCGGATAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SLDFRSLLFQMRCCM*VTRNPGSMSAADRA Trigger: GGCCCTATCCGCTGCAGACATCGACCCAGGGTTTCTAGTAACCAACATACAGCACCTCATCTGGAACAGCAAGGATCTGAAGTCAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161994.2 |
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| CDS CAA 90 bp | ACACTCTGTTGGAAGCTACTTAATCCTCTGTCAAAGCGACCCATCTaGAGTCCGTTCAGTAGGTCTGTGAGGGGCCGTATGAACCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: TLCWKLLNPLSKRPI*SPFSRSVRGRMNPW Trigger: CCAAGGGTTCATACGGCCCCTCACAGACCTACTGAACGGACTCAAGATGGGTCGCTTTGACAGAGGATTAAGTAGCTTCCAACAGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161867.8 ENSMUST00000161994.2 |
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| CDS CAA 72 bp | TGGAAGCTACTTAATCCTCTGTCAAAGCGACCCATCTaGAGTCCGTTCAGTAGGTCTGTGAGGGGCCGTATG | + |
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Preference number: 6 (lower is better) Translates to: WKLLNPLSKRPI*SPFSRSVRGRM Trigger: CATACGGCCCCTCACAGACCTACTGAACGGACTCAAGATGGGTCGCTTTGACAGAGGATTAAGTAGCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161867.8 ENSMUST00000161994.2 |
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| CDS TCA 72 bp | TCAGACTCGTCTCCTGTTCACCGTCTCTTGATCTCTTaGCTTCAGATCCTTGCTGTTCCAGATGAGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SDSSPVHRLLIS*LQILAVPDEVL Trigger: CAGCACCTCATCTGGAACAGCAAGGATCTGAAGTCAAGAGATCAAGAGACGGTGAACAGGAGACGAGTCTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161994.2 |
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| CDS CCA 72 bp | TCTGTAAAACACCCACTATGCGCTGGATCCGGTCCATaGCCACACTCTGTTGGAAGCTACTTAATCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SVKHPLCAGSGP*PHSVGSYLILC Trigger: ACAGAGGATTAAGTAGCTTCCAACAGAGTGTGGCCATGGACCGGATCCAGCGCATAGTGGGTGTTTTACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000159863.2 ENSMUST00000161866.8 ENSMUST00000161867.8 |
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| CDS CAA 72 bp | TTGAGCAAAGAGCAGATCTCCCTCTGTAGTACATCCTaGGGTGTTCAGACTCGTCTCCTGTTCACCGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LSKEQISLCSTS*GVQTRLLFTVS Trigger: AGAGACGGTGAACAGGAGACGAGTCTGAACACCCAAGGATGTACTACAGAGGGAGATCTGCTCTTTGCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161994.2 |
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| CDS TCA 72 bp | TTGGGTGTTCAGACTCGTCTCCTGTTCACCGTCTCTTaGTCTCTTGACTTCAGATCCTTGCTGTTCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: LGVQTRLLFTVS*SLDFRSLLFQM Trigger: CATCTGGAACAGCAAGGATCTGAAGTCAAGAGATCAAGAGACGGTGAACAGGAGACGAGTCTGAACACCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161994.2 |
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| CDS GCA 72 bp | ATCCAGGTGAGGTTCATAGCTGGCCATCCAGTGAGATaGCAAGGCTGCTTTGGTTTCAAAACTAAATGTCCC | + |
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Preference number: 6 (lower is better) Translates to: IQVRFIAGHPVR*QGCFGFKTKCP Trigger: GGGACATTTAGTTTTGAAACCAAAGCAGCCTTGGCATCTCACTGGATGGCCAGCTATGAACCTCACCTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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| CDS CCA 72 bp | TGCTTTGGTTTCAAAACTAAATGTCCCAGCTGTGTTTaGCCCATCTTCTCTAGGAGAGGTGCAGGAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: CFGFKTKCPSCV*PIFSRRGAGEA Trigger: TGCTTCTCCTGCACCTCTCCTAGAGAAGATGGGCCAAACACAGCTGGGACATTTAGTTTTGAAACCAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036418.10 ENSMUST00000159739.8 ENSMUST00000161866.8 |
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