Pregenerated sensors for CIAPIN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031781Ensembl transcript IDs: ENSMUST00000034233.15, ENSMUST00000161762.4, ENSMUST00000161792.9, ENSMUST00000162357.2, ENSMUST00000162538.9
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCAGAGCGCCTaGATCCAGAGGTGGGAGGAGGCCGTGGGAGGAGCTGAGGACAGG | + |
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Preference number: 1 (lower is better) Translates to: LARLQASPCECFQSA*IQRWEEAVGGAEDR Trigger: CCTGTCCTCAGCTCCTCCCACGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| 3UTR CCA 90 bp | CACAGCGGAAAGCGTCACCCAGGTAGCAATTTCCACAGGCTGACTTaGGCTGAGAGCTCTGCGCCTTGGACTGCTCCCGCTCCAGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: HSGKRHPGSNFHRLT*AESSAPWTAPAPVP Trigger: AGGAACTGGAGCGGGAGCAGTCCAAGGCGCAGAGCTCTCAGCCCAAGTCAGCCTGTGGAAATTGCTACCTGGGTGACGCTTTCCGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161762.4 |
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| 3UTR GCA 90 bp | GGCCAGACAAATAGCTGTGCCCCTACCACTGCAAATTCCTTGGTGTaGAGCAGCAGCCAGGCAGAGGCCTACATGTGCTCTGGGCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: GQTNSCAPTTANSLV*SSSQAEAYMCSGQG Trigger: TCCTTGCCCAGAGCACATGTAGGCCTCTGCCTGGCTGCTGCTGCACACCAAGGAATTTGCAGTGGTAGGGGCACAGCTATTTGTCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR CCA 90 bp | CATCCTGAGGAAGTCCAGCAGGTGGCAGCATCACTGAGCGGAGCCTaGAGCTTACTCAGCATAAATACTCAAGGGTGGAGAGGGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: HPEEVQQVAASLSGA*SLLSINTQGWRGTA Trigger: TGCTGTCCCTCTCCACCCTTGAGTATTTATGCTGAGTAAGCTCCAGGCTCCGCTCAGTGATGCTGCCACCTGCTGGACTTCCTCAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
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| 3UTR TCA 90 bp | GGACCCACGTGGTGGAAGGAGAACCAGCTCTGGCAAGTTATTCCGTaGCCTCCAGGTGCACCATGGCACGTGTGCCTGTATACACATAAA | + |
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Preference number: 1 (lower is better) Translates to: GPTWWKENQLWQVIP*PPGAPWHVCLYTHK Trigger: TTTATGTGTATACAGGCACACGTGCCATGGTGCACCTGGAGGTCACGGAATAACTTGCCAGAGCTGGTTCTCCTTCCACCACGTGGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR CCA 90 bp | GTGCCAGTCATAGCTAGCAATCAACAAGCAGGTCTGAAGGGCTTGTaGCGTTTACTAAGCCCACAAGGAAGCTCTGGTCCAGGAGCATCT | + |
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Preference number: 1 (lower is better) Translates to: VPVIASNQQAGLKGL*RLLSPQGSSGPGAS Trigger: AGATGCTCCTGGACCAGAGCTTCCTTGTGGGCTTAGTAAACGCCACAAGCCCTTCAGACCTGCTTGTTGATTGCTAGCTATGACTGGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR CCA 90 bp | CAAGACCCCTTAAGGCCCAGCTGTCACCAAAGCCCAGGAAAGATGTaGCCTGCCTCTGCTGCCTATACTAACCAAGTGATTTCAGAACGA | + |
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Preference number: 1 (lower is better) Translates to: QDPLRPSCHQSPGKM*PASAAYTNQVISER Trigger: TCGTTCTGAAATCACTTGGTTAGTATAGGCAGCAGAGGCAGGCCACATCTTTCCTGGGCTTTGGTGACAGCTGGGCCTTAAGGGGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR GCA 90 bp | AAGCCTCTTCCACTCAGAAGAGAAACACCAGAGGTTTTCAGGGTTTaGTGTAATTGGAGGGGAGGTAACACAAGGCAAGGGTCACTGGGG | + |
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Preference number: 1 (lower is better) Translates to: KPLPLRRETPEVFRV*CNWRGGNTRQGSLG Trigger: CCCCAGTGACCCTTGCCTTGTGTTACCTCCCCTCCAATTACAGCAAACCCTGAAAACCTCTGGTGTTTCTCTTCTGAGTGGAAGAGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR GCA 90 bp | AGTGATTCCAATGGTCAGCCAGTGTTGAACTGTCCAAACAAATCCTaGTGTGTCCCCATCTGGCCACGCCTTCACTCTTATCTGGTAGGG | + |
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Preference number: 1 (lower is better) Translates to: SDSNGQPVLNCPNKS*CVPIWPRLHSYLVG Trigger: CCCTACCAGATAAGAGTGAAGGCGTGGCCAGATGGGGACACAGCAGGATTTGTTTGGACAGTTCAACACTGGCTGACCATTGGAATCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR CCA 90 bp | GGGTTTGCTGTAATTGGAGGGGAGGTAACACAAGGCAAGGGTCACTaGGGTCAACAGAAATTCTGCTTCTCAAAGGGCTTTTCACCACAC | + |
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Preference number: 1 (lower is better) Translates to: GFAVIGGEVTQGKGH*GQQKFCFSKGFSPH Trigger: GTGTGGTGAAAAGCCCTTTGAGAAGCAGAATTTCTGTTGACCCCAGTGACCCTTGCCTTGTGTTACCTCCCCTCCAATTACAGCAAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR TCA 90 bp | CCATGGATCCCAGCCATTAATTCAGGCACAGGCTGTGTTCTCATTTaGAAGCGAGTCCTCTTTCAAGCTGGCACAGTGATGACAGAACCA | + |
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Preference number: 1 (lower is better) Translates to: PWIPAINSGTGCVLI*KRVLFQAGTVMTEP Trigger: TGGTTCTGTCATCACTGTGCCAGCTTGAAAGAGGACTCGCTTTCAAATGAGAACACAGCCTGTGCCTGAATTAATGGCTGGGATCCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR CCA 90 bp | CAGATTCTAAGCCAAAGACTCCATAGAGCTAAGAAGCCAGGGAGCTaGAAGATTCCTCAATGGTTAAGAGAACTTAGCTGCTTTTACAGA | + |
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Preference number: 1 (lower is better) Translates to: QILSQRLHRAKKPGS*KIPQWLRELSCFYR Trigger: TCTGTAAAAGCAGCTAAGTTCTCTTAACCATTGAGGAATCTTCCAGCTCCCTGGCTTCTTAGCTCTATGGAGTCTTTGGCTTAGAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGCGCCTTGGACTGCTCCCGCTCCAGTTCCTCTGCGAGGCCACAGGTGCACCTGCTCGCCAGGCTTaGAGGCTGGCATCCCGAGGT | + |
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Preference number: 2 (lower is better) Translates to: ALRLGLLPLQFLCEATGAPARQA*RLASRG Trigger: ACCTCGGGATGCCAGCCTTCAAGCCTGGCGAGCAGG...TGCACCTGTGGCCTCGCAGAGGAACTGGAGCGGGAGCAGTCCAAGGCGCAGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161762.4 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCGCCTTGGACTGCTCCCGCTCCAGTTCCTCTGCGAGGCCACAGGTGCAGAGGACAGGAGTTGCTaGAGGAGGAGGTGTGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: ALRLGLLPLQFLCEATGAEDRSC*RRRCVG Trigger: GCCCACACACCTCCTCCTCCAGCAACTCCTGTCCTC...TGCACCTGTGGCCTCGCAGAGGAACTGGAGCGGGAGCAGTCCAAGGCGCAGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161762.4 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTCGCTCGCTCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCAGAGCGGCCGTGGGAGGAGCTaGGGACAGGAGTTGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: QLRSLARLQASPCECFQSGRGRS*GQELLE Trigger: CTCCAGCAACTCCTGTCCTCAGCTCCTCCCACGGCC...GCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGCGAAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCCAGCTGTCACCAAAGCCCAGGAAAGATGTGGCCTGCCTCTGCTGCCTATACTGAGGACCTGGCTTTaGTCCCTGGGACCCACGTGG | + |
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Preference number: 2 (lower is better) Translates to: GPAVTKAQERCGLPLLPILRTWL*SLGPTW Trigger: CCACGTGGGTCCCAGGGATCAAAGCCAGGTCCTCAG...TATAGGCAGCAGAGGCAGGCCACATCTTTCCTGGGCTTTGGTGACAGCTGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTCAGCTCCAAGACCCCTTAAGGCCCAGCTGTCACCAAAGCCCAGGAAAGGGCCGTGGGAGGAGCTaGGGACAGGAGTTGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: MLQLQDPLRPSCHQSPGKGRGRS*GQELLE Trigger: CTCCAGCAACTCCTGTCCTCAGCTCCTCCCACGGCC...CTTTCCTGGGCTTTGGTGACAGCTGGGCCTTAAGGGGTCTTGGAGCTGAAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCCAGCTGTCACCAAAGCCCAGGAAAGATGTGGCCTGCCTCTGCTGCCTATACCGGCTGCCTCTGGCTaGCAAGTGCTGGGGTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: GPAVTKAQERCGLPLLPIPAASG*QVLGLK Trigger: CTTTAACCCCAGCACTTGGCAGCCAGAGGCAGCCGG...TATAGGCAGCAGAGGCAGGCCACATCTTTCCTGGGCTTTGGTGACAGCTGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTCAGCTCCAAGACCCCTTAAGGCCCAGCTGTCACCAAAGCCCAGGAAAGAGGCAGGAGGGAGACTaGAGAGGGCCTCCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: MLQLQDPLRPSCHQSPGKRQEGD*RGPPAL Trigger: CAGAGCAGGAGGCCCTCTTCAGTCTCCCTCCTGCCT...CTTTCCTGGGCTTTGGTGACAGCTGGGCCTTAAGGGGTCTTGGAGCTGAAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCCAGCTGTCACCAAAGCCCAGGAAAGATGTGGCCTGCCTCTGCTGCCTATAAATGGCTGCCTAGCCTaGGGACCTGGCTTTGATCCC | + |
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Preference number: 2 (lower is better) Translates to: GPAVTKAQERCGLPLLPINGCLA*GPGFDP Trigger: GGGATCAAAGCCAGGTCCTCAGGCTAGGCAGCCATT...TATAGGCAGCAGAGGCAGGCCACATCTTTCCTGGGCTTTGGTGACAGCTGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTAGGCGCATCCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTCAAAGCACCCCACCCCACTaGCCACAGCAGCTTCGCTCG | + |
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Preference number: 2 (lower is better) Translates to: FLRRIHPLPLTLRDRSPQSTPPH*PQQLRS Trigger: CGAGCGAAGCTGCTGTGGGCAGTGGGGTGGGGTGCT...TTGAGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGGATGCGCCTAAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| 3UTR CAA 90 bp | GAGTCTGGCCAGACAAATAGCTGTGCCCCTACCACTGCAAATTCCTaGGTGTGCAGCAGCAGCCAGGCAGAGGCCTACATGTGCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: ESGQTNSCAPTTANS*VCSSSQAEAYMCSG Trigger: CCCAGAGCACATGTAGGCCTCTGCCTGGCTGCTGCTGCACACCAAGGAATTTGCAGTGGTAGGGGCACAGCTATTTGTCTGGCCAGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR TCA 90 bp | CGCATCCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTCAATCCTTGGTCGCAAGCCTCTCCCTGTaGGTGTTTTCAGAGCGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RIHPLPLTLRDRSPQSLVASLSL*VFSERL Trigger: CAGGCGCTCTGAAAACACTCACAGGGAGAGGCTTGC...GACCAAGGATTGAGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGGATGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| 3UTR CAA 90 bp | CGAGTCCTCTTTCAAGCTGGCACAGTGATGACAGAACCAAGCTCCTaGCTGTGGGGCTGTAACCACCACCACCCCACCACCACCCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: RVLFQAGTVMTEPSS*LWGCNHHHPTTTLF Trigger: AAAAAGGGTGGTGGTGGGGTGGTGGTGGTTACAGCCCCACAGCAAGGAGCTTGGTTCTGTCATCACTGTGCCAGCTTGAAAGAGGACTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR TCA 90 bp | CGCATCCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTCAATCCTTGGTCTGTTTTCAGAGCGCCTaGATCCAGAGGTGGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RIHPLPLTLRDRSPQSLVCFQSA*IQRWEE Trigger: CTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACA...GACCAAGGATTGAGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGGATGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| 3UTR-3UTR GCA 90 bp | GACCTGGCTTTGATCCCTGGGACCCACGTGGTGGAAGGAGAACCAGCTCTGGCAGAGGTTTTCAGGGTTTaGTGTAATTGGAGGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: DLALIPGTHVVEGEPALAEVFRV*CNWRGG Trigger: ACCTCCCCTCCAATTACAGCAAACCCTGAAAACCTC...TGCCAGAGCTGGTTCTCCTTCCACCACGTGGGTCCCAGGGATCAAAGCCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR CCA 90 bp | CCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTCAATCCTTGGTCTTTCAGAGGACAGGAGTTGCTaGAGGAGGAGGTGTGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: PPSSPNTKRQVPSILGLSEDRSC*RRRCVG Trigger: GCCCACACACCTCCTCCTCCAGCAACTCCTGTCCTC...TGAAAGACCAAGGATTGAGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGCCTTCACCTCTGCAACCTGTCTCACTCACACCCCCTCATGCTTCAGCTCCTCCTTCTGGCCCTTGTaGAAGGACACAAAGACTGAC | + |
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Preference number: 2 (lower is better) Translates to: RAFTSATCLTHTPSCFSSSFWPL*KDTKTD Trigger: GTCAGTCTTTGTGTCCTTCCACAAGGGCCAGAAGGA...GGAGCTGAAGCATGAGGGGGTGTGAGTGAGACAGGTTGCAGAGGTGAAGGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR CCA 90 bp | CAAGCAATGGCAGGCTTCCCTGTAGACTCAGCTCAACCAGGAGTATCTGCAAAGGGCCTACATGTGCTCTaGGCAAGGATTCTCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: QAMAGFPVDSAQPGVSAKGLHVL*ARILST Trigger: GGTGGAGAGAATCCTTGCCCAGAGCACATGTAGGCC...CTTTGCAGATACTCCTGGTTGAGCTGAGTCTACAGGGAAGCCTGCCATTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR CCA 90 bp | CGCCTTCCGAATCGCCATCACCACATACTGGGTGAAGCAGTATTTTGTAACATCCCTCTCTGGGCTCCCTaGGCACTGCACAAACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RLPNRHHHILGEAVFCNIPLWAP*ALHKPG Trigger: ACCAGGTTTGTGCAGTGCCCAGGGAGCCCAGAGAGG...GATGTTACAAAATACTGCTTCACCCAGTATGTGGTGATGGCGATTCGGAAGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR CAA 90 bp | TTCGTGCCAGTCATAGCTAGCAATCAACAAGCAGGTCTGAAGGGCTaGTGGCGTTTACTAAGCCCACAAGGAAGCTCTGGTCCAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: FVPVIASNQQAGLKG*WRLLSPQGSSGPGA Trigger: TGCTCCTGGACCAGAGCTTCCTTGTGGGCTTAGTAAACGCCACAAGCCCTTCAGACCTGCTTGTTGATTGCTAGCTATGACTGGCACGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR TCA 90 bp | CGCCTTCCGAATCGCCATCACCACATACTGGGTGAAGCAGTATTTTGTAACATCTGTTTTCAGAGCGCCTaGATCCAGAGGTGGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RLPNRHHHILGEAVFCNICFQSA*IQRWEE Trigger: CTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACA...GATGTTACAAAATACTGCTTCACCCAGTATGTGGTGATGGCGATTCGGAAGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCCACTCAGAAGAGAAACACCAGAGGTTTTCAGGGTTTGCTGTAATTGGAGCTAGTGGGCAGTTCTaGCCCCACTCCTGTGTGACG | + |
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Preference number: 2 (lower is better) Translates to: LFHSEEKHQRFSGFAVIGASGQF*PHSCVT Trigger: CGTCACACAGGAGTGGGGCCAGAACTGCCCACTAGC...TCCAATTACAGCAAACCCTGAAAACCTCTGGTGTTTCTCTTCTGAGTGGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR GCA 90 bp | CAAAGACTCCATAGAGCTAAGAAGCCAGGGAGCTGGAAGATTCCTCAATGGTTAGCAAATTCCTTGGTGTaGAGCAGCAGCCAGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: QRLHRAKKPGSWKIPQWLANSLV*SSSQAE Trigger: CTCTGCCTGGCTGCTGCTGCACACCAAGGAATTTGC...TAACCATTGAGGAATCTTCCAGCTCCCTGGCTTCTTAGCTCTATGGAGTCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR TCA 90 bp | ACCCTTTCACTTAGCAAAGCCTCTTCCACTCAGAAGAGAAACACCAGAGGTTTTCCAAGAACTACATCCTaGGGAAGTCCAGCAGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: TLSLSKASSTQKRNTRGFPRTTS*GSPAGG Trigger: GCCACCTGCTGGACTTCCTCAGGATGTAGTTCTTGG...AAAACCTCTGGTGTTTCTCTTCTGAGTGGAAGAGGCTTTGCTAAGTGAAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR TCA 90 bp | CAAAGACTCCATAGAGCTAAGAAGCCAGGGAGCTGGAAGATTCCTCAATGGTTATACAGTAAAACGGGGTaGGGTGAGAAAGGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: QRLHRAKKPGSWKIPQWLYSKTG*GEKGRG Trigger: CCCTCTGCCTTTCTCACCTCACCCCGTTTTACTGTA...TAACCATTGAGGAATCTTCCAGCTCCCTGGCTTCTTAGCTCTATGGAGTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR GCA 90 bp | AAGATGTGGCCTGCCTCTGCTGCCTATACTAACCAAGTGATTTCAGAACGAGGGTTCACCACTAGCTTGTaGACAGGCAGCAAAACAAAG | + |
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Preference number: 2 (lower is better) Translates to: KMWPASAAYTNQVISERGFTTSL*TGSKTK Trigger: CTTTGTTTTGCTGCCTGTGCACAAGCTAGTGGTGAA...CCCTCGTTCTGAAATCACTTGGTTAGTATAGGCAGCAGAGGCAGGCCACATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR GCA 90 bp | CGCCTTCCGAATCGCCATCACCACATACTGGGTGAAGCAGTATTTTGTAACATCGGGCTGAGTTTTTGTTaGTGTGTGACAAATCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: RLPNRHHHILGEAVFCNIGLSFC*CVTNQS Trigger: TGACTGATTTGTCACACAGCAACAAAAACTCAGCCC...GATGTTACAAAATACTGCTTCACCCAGTATGTGGTGATGGCGATTCGGAAGGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCCACTCAGAAGAGAAACACCAGAGGTTTTCAGGGTTTGCTGTAATTGGATTGACAGCTAACCCATaGCTCCAAGAACTACATCCT | + |
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Preference number: 2 (lower is better) Translates to: LFHSEEKHQRFSGFAVIGLTANP*LQELHP Trigger: AGGATGTAGTTCTTGGAGCCATGGGTTAGCTGTCAA...TCCAATTACAGCAAACCCTGAAAACCTCTGGTGTTTCTCTTCTGAGTGGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGATTCCTCAATGGTTAAGAGAACTTAGCTGCTTTTACAGAGAACCTGTTCCCCACTTATTATCTTaGCTTTTCTGTCAATTGCTC | + |
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Preference number: 2 (lower is better) Translates to: WKIPQWLRELSCFYREPVPHLLS*LFCQLL Trigger: GAGCAATTGACAGAAAAGCCAAGATAATAAGTGGGG...AACAGGTTCTCTGTAAAAGCAGCTAAGTTCTCTTAACCATTGAGGAATCTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR GCA 72 bp | CCCACTGCCCACAGCAGCTTCGCTCGCTCGCTCGGCTaGAAGCCTCTCCCTGTGAGTGTTTTCAGAGCGCCT | + |
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Preference number: 3 (lower is better) Translates to: PTAHSSFARSLG*KPLPVSVFRAP Trigger: AGGCGCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGCGAAGCTGCTGTGGGCAGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| 3UTR GCA 72 bp | GCTCTGCGCCTTGGACTGCTCCCGCTCCAGTTCCTCTaGGAGGCCACAGGTGCAGTTCTTACAGGCCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: ALRLGLLPLQFL*EATGAVLTGLP Trigger: AGGAAGGCCTGTAAGAACTGCACCTGTGGCCTCGCAGAGGAACTGGAGCGGGAGCAGTCCAAGGCGCAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161762.4 |
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| 3UTR TCA 72 bp | GCTTCGCTCGCTCGCTCGGCTGCAAGCCTCTCCCTGTaGGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: ASLARSAASLSL*VFSERLNPEVG Trigger: TCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGCGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| 3UTR TCA 72 bp | GATGGCTCAGTGCGGGAAGGTAATGGCTGCCTAGCCTaGGGACCTGGCTTTGATCCCTGGGACCCACGTGGT | + |
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Preference number: 3 (lower is better) Translates to: DGSVREGNGCLA*GPGFDPWDPRG Trigger: ACCACGTGGGTCCCAGGGATCAAAGCCAGGTCCTCAGGCTAGGCAGCCATTACCTTCCCGCACTGAGCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR GCA 72 bp | CCTCCTGCTCTGATACTTCCTGCTGCTGGTCCAGCCTaGCCTAACCTGCATTCTCCACCTGGCTCCTACAGG | + |
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Preference number: 3 (lower is better) Translates to: PPALILPAAGPA*PNLHSPPGSYR Trigger: CCTGTAGGAGCCAGGTGGAGAATGCAGGTTAGGGCAGGCTGGACCAGCAGCAGGAAGTATCAGAGCAGGAGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| 3UTR CCA 72 bp | AAGCGTCACCCAGGTAGCAATTTCCACAGGCTGACTTaGGCTGAGAGCTCTGCGCCTTGGACTGCTCCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: KRHPGSNFHRLT*AESSAPWTAPA Trigger: AGCGGGAGCAGTCCAAGGCGCAGAGCTCTCAGCCCAAGTCAGCCTGTGGAAATTGCTACCTGGGTGACGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161762.4 |
||
| 3UTR GCA 72 bp | CCAGGAGTATCTGCAAAGCCCGAGGGCCTTCACCTCTaGAACCTGTCTCACTCACACCCCCTCATGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PGVSAKPEGLHL*NLSHSHPLMLQ Trigger: CTGAAGCATGAGGGGGTGTGAGTGAGACAGGTTGCAGAGGTGAAGGCCCTCGGGCTTTGCAGATACTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR TCA 72 bp | TGGGGGAGTGACTTCTTTGGTGCCCCTGAGGCCCTTTaGCAGCTAACCCATGGCTCCAAGAACTACATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: WGSDFFGAPEAL*QLTHGSKNYIL Trigger: CAGGATGTAGTTCTTGGAGCCATGGGTTAGCTGTCAAAGGGCCTCAGGGGCACCAAAGAAGTCACTCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
||
| 3UTR TCA 72 bp | TGGTGGAAGGAGAACCAGCTCTGGCAAGTTATTCCGTaGCCTCCAGGTGCACCATGGCACGTGTGCCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: WWKENQLWQVIP*PPGAPWHVCLY Trigger: ATACAGGCACACGTGCCATGGTGCACCTGGAGGTCACGGAATAACTTGCCAGAGCTGGTTCTCCTTCCACCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR GCA 72 bp | GCTAGCCTTGAACTCAGAAATCCGGCTGCCTCTGGCTaGCAAGTGCTGGGGTTAAAGGCATACACCACCACT | + |
|
Preference number: 3 (lower is better) Translates to: ASLELRNPAASG*QVLGLKAYTTT Trigger: AGTGGTGGTGTATGCCTTTAACCCCAGCACTTGGCAGCCAGAGGCAGCCGGATTTCTGAGTTCAAGGCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR CCA 72 bp | GTGAGAAAGGCAGAGGGACACAAGATGGATCACAACTaGGGGAGTGACTTCTTTGGTGCCCCTGAGGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VRKAEGHKMDHN*GSDFFGAPEAL Trigger: AAGGGCCTCAGGGGCACCAAAGAAGTCACTCCCCCAGTTGTGATCCATCTTGTGTCCCTCTGCCTTTCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
||
| 3UTR TCA 72 bp | CCTAACCTGCATTCTCCACCTGGCTCCTACAGGAGGTaGAGACAGATCCTAGTCCTAGCTAGTGGGCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PNLHSPPGSYRR*RQILVLASGQF Trigger: GAACTGCCCACTAGCTAGGACTAGGATCTGTCTTCACCTCCTGTAGGAGCCAGGTGGAGAATGCAGGTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR CCA 72 bp | GAAGTCCAGCAGGTGGCAGCATCACTGAGCGGAGCCTaGAGCTTACTCAGCATAAATACTCAAGGGTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: EVQQVAASLSGA*SLLSINTQGWR Trigger: TCTCCACCCTTGAGTATTTATGCTGAGTAAGCTCCAGGCTCCGCTCAGTGATGCTGCCACCTGCTGGACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
||
| 3UTR CCA 72 bp | AGACAAATAGCTGTGCCCCTACCACTGCAAATTCCTTaGTGTGCAGCAGCAGCCAGGCAGAGGCCTACATGT | + |
|
Preference number: 3 (lower is better) Translates to: RQIAVPLPLQIP*CAAAARQRPTC Trigger: ACATGTAGGCCTCTGCCTGGCTGCTGCTGCACACCAAGGAATTTGCAGTGGTAGGGGCACAGCTATTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR-3UTR CAA 90 bp | GATCCCTGGGACCCACGTGGTGGAAGGAGAACCAGCTCTGGCAAGTTATTCCGTTGGCTTTTCTGTCAATaGCTCTGGCCTGAGAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: DPWDPRGGRRTSSGKLFRWLFCQ*LWPEKT Trigger: GGTTTTCTCAGGCCAGAGCAATTGACAGAAAAGCCA...ACGGAATAACTTGCCAGAGCTGGTTCTCCTTCCACCACGTGGGTCCCAGGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR CCA 72 bp | AGAGAAACACCAGAGGTTTTCAGGGTTTGCTGTAATTaGAGGGGAGGTAACACAAGGCAAGGGTCACTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RETPEVFRVCCN*RGGNTRQGSLG Trigger: CCCCAGTGACCCTTGCCTTGTGTTACCTCCCCTCCAATTACAGCAAACCCTGAAAACCTCTGGTGTTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR CCA 72 bp | TTGAACTGTCCAAACAAATCCTGCTGTGTCCCCATCTaGCCACGCCTTCACTCTTATCTGGTAGGGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LNCPNKSCCVPI*PRLHSYLVGLL Trigger: CAGAAGCCCTACCAGATAAGAGTGAAGGCGTGGCCAGATGGGGACACAGCAGGATTTGTTTGGACAGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR GCA 72 bp | CCACTCAGAAGAGAAACACCAGAGGTTTTCAGGGTTTaGTGTAATTGGAGGGGAGGTAACACAAGGCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PLRRETPEVFRV*CNWRGGNTRQG Trigger: CCCTTGCCTTGTGTTACCTCCCCTCCAATTACAGCAAACCCTGAAAACCTCTGGTGTTTCTCTTCTGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR GCA 72 bp | AATGGTCAGCCAGTGTTGAACTGTCCAAACAAATCCTaGTGTGTCCCCATCTGGCCACGCCTTCACTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: NGQPVLNCPNKS*CVPIWPRLHSY Trigger: ATAAGAGTGAAGGCGTGGCCAGATGGGGACACAGCAGGATTTGTTTGGACAGTTCAACACTGGCTGACCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR CCA 72 bp | ATAGCTAGCAATCAACAAGCAGGTCTGAAGGGCTTGTaGCGTTTACTAAGCCCACAAGGAAGCTCTGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: IASNQQAGLKGL*RLLSPQGSSGP Trigger: TGGACCAGAGCTTCCTTGTGGGCTTAGTAAACGCCACAAGCCCTTCAGACCTGCTTGTTGATTGCTAGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR TCA 72 bp | CCAGCCATTAATTCAGGCACAGGCTGTGTTCTCATTTaGAAGCGAGTCCTCTTTCAAGCTGGCACAGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: PAINSGTGCVLI*KRVLFQAGTVM Trigger: CATCACTGTGCCAGCTTGAAAGAGGACTCGCTTTCAAATGAGAACACAGCCTGTGCCTGAATTAATGGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR CCA 72 bp | AAACAAGGCTTTGTGCATACCCAAGTGTTCCATCCATaGATCCCAGCCATTAATTCAGGCACAGGCTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KQGFVHTQVFHP*IPAINSGTGCV Trigger: AACACAGCCTGTGCCTGAATTAATGGCTGGGATCCATGGATGGAACACTTGGGTATGCACAAAGCCTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR CCA 72 bp | AGCCAAAGACTCCATAGAGCTAAGAAGCCAGGGAGCTaGAAGATTCCTCAATGGTTAAGAGAACTTAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SQRLHRAKKPGS*KIPQWLRELSC Trigger: GCAGCTAAGTTCTCTTAACCATTGAGGAATCTTCCAGCTCCCTGGCTTCTTAGCTCTATGGAGTCTTTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR TCA 72 bp | CACAGGAGGTTGTTTTTATTTTTGGAAGCTGCCCAGTaGTTCCAATGGTCAGCCAGTGTTGAACTGTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: HRRLFLFLEAAQ*FQWSASVELSK Trigger: TTTGGACAGTTCAACACTGGCTGACCATTGGAATCACTGGGCAGCTTCCAAAAATAAAAACAACCTCCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR CCA 72 bp | AGAGCTAAGAAGCCAGGGAGCTGGAAGATTCCTCAATaGTTAAGAGAACTTAGCTGCTTTTACAGAGAACCT | + |
|
Preference number: 3 (lower is better) Translates to: RAKKPGSWKIPQ*LRELSCFYREP Trigger: AGGTTCTCTGTAAAAGCAGCTAAGTTCTCTTAACCATTGAGGAATCTTCCAGCTCCCTGGCTTCTTAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR TCA 72 bp | TGTTTTTGGGTTCTATACTGTAAGCTTACCAATGGCTaGAACTCCTCCTTAGGCTATGGTCACAGACTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CFWVLYCKLTNG*NSSLGYGHRLK Trigger: CTTGAGTCTGTGACCATAGCCTAAGGAGGAGTTTCAGCCATTGGTAAGCTTACAGTATAGAACCCAAAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR TCA 72 bp | TTCCAGGCCCACACATGTATCCATGGGAGTTTAGGTTaGATTTGTTTTTGGGTTCTATACTGTAAGCTTACC | + |
|
Preference number: 3 (lower is better) Translates to: FQAHTCIHGSLG*ICFWVLYCKLT Trigger: GGTAAGCTTACAGTATAGAACCCAAAAACAAATTCAACCTAAACTCCCATGGATACATGTGTGGGCCTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| 3UTR CCA 72 bp | ACAAAACCAAGGCTTCCAGGCCCACACATGTATCCATaGGAGTTTAGGTTGAATTTGTTTTTGGGTTCTATA | + |
|
Preference number: 3 (lower is better) Translates to: TKPRLPGPHMYP*EFRLNLFLGSI Trigger: TATAGAACCCAAAAACAAATTCAACCTAAACTCCCATGGATACATGTGTGGGCCTGGAAGCCTTGGTTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCGCCTTGGACTGCTCCCGCTCCAGTTCCTCTGCGAGGCCACAGGTGCAAAAAAGACAGCCCCCTaGCCGGAGGATCCGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALRLGLLPLQFLCEATGAKKTAP*PEDPGH Trigger: ATGGCCCGGATCCTCCGGCCAGGGGGCTGTCTTTTT...TGCACCTGTGGCCTCGCAGAGGAACTGGAGCGGGAGCAGTCCAAGGCGCAGAGC 64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000161762.4 |
||
| CDS-3UTR TCA 90 bp | GTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGTGGGAGGAGCCTGCTCGCCAGGCTTaGAGGCTGGCATCCCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSVFRAPESRGGRRPWEEPARQA*RLASRG Trigger: ACCTCGGGATGCCAGCCTTCAAGCCTGGCGAGCAGG...CTCCTCCCACGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCCTGTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGCCTGCTCGCCAGGCTTaGAGGCTGGCATCCCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLPVSVFRAPESRGGRRPPARQA*RLASRG Trigger: ACCTCGGGATGCCAGCCTTCAAGCCTGGCGAGCAGG...CGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCACAGGGAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGCTGTCACCAAAGCCCAGGAAAGATGTGGCCTGCCTCTGCTGCCTATACCTGCTCGCCAGGCTTaGAGGCTGGCATCCCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPAVTKAQERCGLPLLPIPARQA*RLASRG Trigger: ACCTCGGGATGCCAGCCTTCAAGCCTGGCGAGCAGG...TATAGGCAGCAGAGGCAGGCCACATCTTTCCTGGGCTTTGGTGACAGCTGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGTGGGAGGAGCTTGTCCCAGAACACTaGCACAAGCTGGCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVFRAPESRGGRRPWEELVPEH*HKLARG Trigger: TCCCCTGGCCAGCTTGTGGCAGTGTTCTGGGACAAG...CTCCTCCCACGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGTGGGAGGAGCTGCTGCGAGGCCACAGGTaGAGTTCTTACAGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVFRAPESRGGRRPWEELLRGHR*SSYRPS Trigger: GGAAGGCCTGTAAGAACTGCACCTGTGGCCTCGCAG...CAGCTCCTCCCACGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR GCA 90 bp | CCTGTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGTGGGAGCTGCGAGGCCACAGGTaGAGTTCTTACAGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVSVFRAPESRGGRRPWELRGHR*SSYRPS Trigger: GGAAGGCCTGTAAGAACTGCACCTGTGGCCTCGCAG...CTCCCACGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCAGCTTCGCTCGCTCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCTTCCACAGGCTGACTTaGGCTGAGAGCTCTGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSFARSLGCKPLPVSVFFHRLT*AESSAP Trigger: AGGCGCAGAGCTCTCAGCCCAAGTCAGCCTGTGGAA...GAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGCGAAGCTGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCGCCTTGGACTGCTCCCGCTCCAGTTCCTCTGCGAGGCCACAGGTGCAACAACAGGCCCCAGCTaGTCTTACCTGAAGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: ALRLGLLPLQFLCEATGATTGPS*SYLKKT Trigger: AGTCTTCTTCAGGTAAGACCAGCTGGGGCCTGTTGT...TGCACCTGTGGCCTCGCAGAGGAACTGGAGCGGGAGCAGTCCAAGGCGCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161762.4 |
||
| CDS-3UTR TCA 90 bp | TTCGCTCGCTCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCAGAGCGCCTGGCTTCCTCAGGAGATaGCTTGTCCCAGAACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FARSLGCKPLPVSVFRAPGFLRR*LVPEHC Trigger: GCAGTGTTCTGGGACAAGTCATCTCCTGAGGAAGCC...AGGCGCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGCGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR TCA 90 bp | GACCTGGCTTTGATCCCTGGGACCCACGTGGTGGAAGGAGAACCAGCTCTGGCAGGCTTCCTCAGGAGATaGCTTGTCCCAGAACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLALIPGTHVVEGEPALAGFLRR*LVPEHC Trigger: GCAGTGTTCTGGGACAAGTCATCTCCTGAGGAAGCC...TGCCAGAGCTGGTTCTCCTTCCACCACGTGGGTCCCAGGGATCAAAGCCAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTGAGAGCTCTGCGCCTTGGACTGCTCCCGCTCCAGTTCCTCTGCGAGGCCCTTAAGGCCTCCCTCTaGAACTCTTTTATTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: GLRALRLGLLPLQFLCEALKASL*NSFIST Trigger: CGTGGAAATAAAAGAGTTGCAGAGGGAGGCCTTAAG...GGCCTCGCAGAGGAACTGGAGCGGGAGCAGTCCAAGGCGCAGAGCTCTCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161762.4 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCGCTCGCTCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCAGAGCAGCCTTCAGGGAGGCTaGGTCAGGCCTCTTCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: QLRSLARLQASPCECFQSSLQGG*VRPLQI Trigger: GATTTGAAGAGGCCTGACCCAGCCTCCCTGAAGGCT...GCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGCGAAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR CCA 90 bp | GCTCGCTCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCAGAGCGCCTGAAAGCCTTCAGGGAGGCTaGGTCAGGCCTCTTCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: ARSLGCKPLPVSVFRAPESLQGG*VRPLQI Trigger: GATTTGAAGAGGCCTGACCCAGCCTCCCTGAAGGCT...TTCAGGCGCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR TCA 90 bp | CTGACTTGGGCTGAGAGCTCTGCGCCTTGGACTGCTCCCGCTCCAGTTCCTCTGCCAGCTGGTCTTACCTaGAGAAGACTTCTTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTWAESSAPWTAPAPVPLPAGLT*RRLLVG Trigger: CCCAACAAGAAGTCTTCTTCAGGTAAGACCAGCTGG...CAGAGGAACTGGAGCGGGAGCAGTCCAAGGCGCAGAGCTCTCAGCCCAAGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161762.4 |
||
| CDS-3UTR GCA 90 bp | AAGCCTCTCCCTGTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCTGCGAGGCCACAGGTaGAGTTCTTACAGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPLPVSVFRAPESRGGRRLRGHR*SSYRPS Trigger: GGAAGGCCTGTAAGAACTGCACCTGTGGCCTCGCAG...CCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCACAGGGAGAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTCCAAGAACTACATCCTGAGGAAGTCCAGCAGGTGGCAGCATCACTGAGCAAAAAGACAGCCCCCTaGCCGGAGGATCCGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WLQELHPEEVQQVAASLSKKTAP*PEDPGH Trigger: ATGGCCCGGATCCTCCGGCCAGGGGGCTGTCTTTTT...GCTCAGTGATGCTGCCACCTGCTGGACTTCCTCAGGATGTAGTTCTTGGAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
||
| CDS-3UTR CCA 90 bp | AAGCCTCTCCCTGTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGTTCCACAGGCTGACTTaGGCTGAGAGCTCTGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPLPVSVFRAPESRGGRRFHRLT*AESSAP Trigger: AGGCGCAGAGCTCTCAGCCCAAGTCAGCCTGTGGAA...CCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCACAGGGAGAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCCTGTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGCTACACCCGACAGAATaGCATCGAAGCTGGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPVSVFRAPESRGGRRPLHPTE*HRSWIP Trigger: AGGAATCCAGCTTCGATGTCATTCTGTCGGGTGTAG...CGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCACAGGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
||
| CDS-3UTR GCA 90 bp | GCTCGCTCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCAGAGCGCCTGAAAGGCATCCTGGAGATTaGTATTGCTCAGGAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ARSLGCKPLPVSVFRAPERHPGD*YCSGAP Trigger: AGGTGCTCCTGAGCAATAGCAATCTCCAGGATGCCT...TTCAGGCGCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCAGGAGGGAGACTGAAGAGGGCCTCCTGCTCTGATACTTCCTGCTGCTGGAGGCATCCTGGAGATTaGTATTGCTCAGGAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: EAGGRLKRASCSDTSCCWRHPGD*YCSGAP Trigger: AGGTGCTCCTGAGCAATAGCAATCTCCAGGATGCCT...CCAGCAGCAGGAAGTATCAGAGCAGGAGGCCCTCTTCAGTCTCCCTCCTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTTAGGCGCATCCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTCAACTTGTCCCAGAACACTaGCACAAGCTGGCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLRRIHPLPLTLRDRSPQLVPEH*HKLARG Trigger: TCCCCTGGCCAGCTTGTGGCAGTGTTCTGGGACAAG...TTGAGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGGATGCGCCTAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGTGGGAGGAGCTGCCAGTTAACTCTTaGAGTCTAGCCACCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSVFRAPESRGGRRPWEELPVNS*SLATSF Trigger: AAAGCTGGTGGCTAGACTGCAAGAGTTAACTGGCAG...CTCCTCCCACGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGTGGGAGGAGTCCTTATGCGAAGACTaGAACAGCTGGGTGACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSVFRAPESRGGRRPWEESLCED*NSWVTF Trigger: AAACGTCACCCAGCTGTTGCAGTCTTCGCATAAGGA...CTCCTCCCACGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
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| CDS-3UTR GCA 90 bp | CACAGCAGCTTCGCTCGCTCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCTCCTTATGCGAAGACTaGAACAGCTGGGTGACGTTT | + |
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Preference number: 4 (lower is better) Translates to: HSSFARSLGCKPLPVSVFSLCED*NSWVTF Trigger: AAACGTCACCCAGCTGTTGCAGTCTTCGCATAAGGA...GAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGCGAAGCTGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
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| CDS-3UTR CCA 90 bp | GAGTTCCTTAGGCGCATCCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTAGCCTTCAGGGAGGCTaGGTCAGGCCTCTTCAAATC | + |
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Preference number: 4 (lower is better) Translates to: EFLRRIHPLPLTLRDRSPSLQGG*VRPLQI Trigger: GATTTGAAGAGGCCTGACCCAGCCTCCCTGAAGGCT...AGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGGATGCGCCTAAGGAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
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| CDS-3UTR GCA 90 bp | CAGCTTCGCTCGCTCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCAGAGCCTTAAGGCCTCCCTCTaGAACTCTTTTATTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: QLRSLARLQASPCECFQSLKASL*NSFIST Trigger: CGTGGAAATAAAAGAGTTGCAGAGGGAGGCCTTAAG...GCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGCGAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| CDS-3UTR GCA 90 bp | CCTGTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGTGGGAGCTTAAGGCCTCCCTCTaGAACTCTTTTATTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: PVSVFRAPESRGGRRPWELKASL*NSFIST Trigger: CGTGGAAATAAAAGAGTTGCAGAGGGAGGCCTTAAG...CTCCCACGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| CDS-3UTR CCA 90 bp | CCTCTCCCTGTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGGAAGACTGCAACAGCTaGGTGACGTTTTCCATGAAT | + |
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Preference number: 4 (lower is better) Translates to: PLPVSVFRAPESRGGRRPEDCNS*VTFSMN Trigger: ATTCATGGAAAACGTCACCCAGCTGTTGCAGTCTTC...CGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCACAGGGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
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| CDS-3UTR TCA 90 bp | CCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTCAATCCTTGGTCTTTCAGGCTTCCTCAGGAGATaGCTTGTCCCAGAACACTGC | + |
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Preference number: 4 (lower is better) Translates to: PPSSPNTKRQVPSILGLSGFLRR*LVPEHC Trigger: GCAGTGTTCTGGGACAAGTCATCTCCTGAGGAAGCC...TGAAAGACCAAGGATTGAGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| CDS-3UTR GCA 90 bp | TCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCAGAGCGCCTGAATCCAGACTGCCAGTTAACTCTTaGAGTCTAGCCACCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLGCKPLPVSVFRAPESRLPVNS*SLATSF Trigger: AAAGCTGGTGGCTAGACTGCAAGAGTTAACTGGCAG...TCTGGATTCAGGCGCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| CDS-3UTR GCA 90 bp | TTCCTTAGGCGCATCCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTCAAAGGCATCCTGGAGATTaGTATTGCTCAGGAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: FLRRIHPLPLTLRDRSPQRHPGD*YCSGAP Trigger: AGGTGCTCCTGAGCAATAGCAATCTCCAGGATGCCT...TTGAGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGGATGCGCCTAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| CDS-3UTR GCA 90 bp | GCTCGCTCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCAGAGCGCCTGAATTGTCATTGTTAAACTaGAACAGCTGGGTGACGTTT | + |
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Preference number: 4 (lower is better) Translates to: ARSLGCKPLPVSVFRAPELSLLN*NSWVTF Trigger: AAACGTCACCCAGCTGTTGCAGTTTAACAATGACAA...TTCAGGCGCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161792.9 |
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| CDS-3UTR TCA 90 bp | CCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTCAATCCTTGGTCTTTCACTACACCCGACAGAATaGCATCGAAGCTGGATTCCT | + |
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Preference number: 4 (lower is better) Translates to: PPSSPNTKRQVPSILGLSLHPTE*HRSWIP Trigger: AGGAATCCAGCTTCGATGTCATTCTGTCGGGTGTAG...TGAAAGACCAAGGATTGAGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
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| CDS-3UTR CCA 90 bp | AGGAATCAAAAACAAGGCTTTGTGCATACCCAAGTGTTCCATCCATGGATCCCAAAAAAGACAGCCCCCTaGCCGGAGGATCCGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RNQKQGFVHTQVFHPWIPKKTAP*PEDPGH Trigger: ATGGCCCGGATCCTCCGGCCAGGGGGCTGTCTTTTT...TGGGATCCATGGATGGAACACTTGGGTATGCACAAAGCCTTGTTTTTGATTCCT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| CDS-3UTR CCA 90 bp | CAAAGACTCCATAGAGCTAAGAAGCCAGGGAGCTGGAAGATTCCTCAATGGTTATTCCACAGGCTGACTTaGGCTGAGAGCTCTGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: QRLHRAKKPGSWKIPQWLFHRLT*AESSAP Trigger: AGGCGCAGAGCTCTCAGCCCAAGTCAGCCTGTGGAA...TAACCATTGAGGAATCTTCCAGCTCCCTGGCTTCTTAGCTCTATGGAGTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| CDS-3UTR GCA 90 bp | CTCTTCCACTCAGAAGAGAAACACCAGAGGTTTTCAGGGTTTGCTGTAATTGGACTTGTCCCAGAACACTaGCACAAGCTGGCCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: LFHSEEKHQRFSGFAVIGLVPEH*HKLARG Trigger: TCCCCTGGCCAGCTTGTGGCAGTGTTCTGGGACAAG...TCCAATTACAGCAAACCCTGAAAACCTCTGGTGTTTCTCTTCTGAGTGGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| CDS-3UTR CCA 90 bp | TTCCTTAGGCGCATCCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTCAAGAAGACTGCAACAGCTaGGTGACGTTTTCCATGAAT | + |
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Preference number: 4 (lower is better) Translates to: FLRRIHPLPLTLRDRSPQEDCNS*VTFSMN Trigger: ATTCATGGAAAACGTCACCCAGCTGTTGCAGTCTTC...TTGAGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGGATGCGCCTAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
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| CDS-3UTR CCA 90 bp | CGCATCCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTCAATCCTTGGTCTTAAACTGCAACAGCTaGGTGACGTTTTCCATGAAT | + |
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Preference number: 4 (lower is better) Translates to: RIHPLPLTLRDRSPQSLVLNCNS*VTFSMN Trigger: ATTCATGGAAAACGTCACCCAGCTGTTGCAGTTTAA...GACCAAGGATTGAGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGGATGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161792.9 |
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| CDS-3UTR GCA 90 bp | ACCCTTTCACTTAGCAAAGCCTCTTCCACTCAGAAGAGAAACACCAGAGGTTTTCTTAAGGCCTCCCTCTaGAACTCTTTTATTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: TLSLSKASSTQKRNTRGFLKASL*NSFIST Trigger: CGTGGAAATAAAAGAGTTGCAGAGGGAGGCCTTAAG...AAAACCTCTGGTGTTTCTCTTCTGAGTGGAAGAGGCTTTGCTAAGTGAAAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| CDS-3UTR CAA 90 bp | GCACCCCACCCCACTGCCCACAGCAGCTTCGCTCGCTCGCTCGGCTGCAAGCCTTCCTCAGGAGATGACTaGTCCCAGAACACTGCCACA | + |
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Preference number: 5 (lower is better) Translates to: APHPTAHSSFARSLGCKPSSGDD*SQNTAT Trigger: TGTGGCAGTGTTCTGGGACAAGTCATCTCCTGAGGA...AGGCTTGCAGCCGAGCGAGCGAGCGAAGCTGCTGTGGGCAGTGGGGTGGGGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| CDS GCA 90 bp | GGGCTGAGAGCTCTGCGCCTTGGACTGCTCCCGCTCCAGTTCCTCTaGGAGGCCACAGGTGCACACTGTCATCCTCCATGTCATTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GLRALRLGLLPLQFL*EATGAHCHPPCHLL Trigger: CAGCAAATGACATGGAGGATGACAGTGTGCACCTGTGGCCTCGCAGAGGAACTGGAGCGGGAGCAGTCCAAGGCGCAGAGCTCTCAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162357.2 |
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| CDS-3UTR CAA 90 bp | GCTCTGCGCCTTGGACTGCTCCCGCTCCAGTTCCTCTGCGAGGCCACAGGTGCATCAAAGTTTGGCTTCTaGCCAGTGACACGGACTGAG | + |
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Preference number: 5 (lower is better) Translates to: ALRLGLLPLQFLCEATGASKFGF*PVTRTE Trigger: CTCAGTCCGTGTCACTGGCAAGAAGCCAAACTTTGA...TGCACCTGTGGCCTCGCAGAGGAACTGGAGCGGGAGCAGTCCAAGGCGCAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161762.4 |
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| CDS-3UTR CAA 90 bp | AGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGTGGGAGGAGCTGTCCTGGAGATTGCTATaGCTCAGGAGCACCTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: SVFRAPESRGGRRPWEELSWRLL*LRSTCS Trigger: CGAGCAGGTGCTCCTGAGCAATAGCAATCTCCAGGA...CAGCTCCTCCCACGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| CDS-3UTR CAA 90 bp | GTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGTGGGAGGAGTCCTGGAGATTGCTATaGCTCAGGAGCACCTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: VSVFRAPESRGGRRPWEESWRLL*LRSTCS Trigger: CGAGCAGGTGCTCCTGAGCAATAGCAATCTCCAGGA...CTCCTCCCACGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| CDS-3UTR CAA 90 bp | CCTGTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGTGGGAGTCCTCAGGAGATGACTaGTCCCAGAACACTGCCACA | + |
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Preference number: 5 (lower is better) Translates to: PVSVFRAPESRGGRRPWESSGDD*SQNTAT Trigger: TGTGGCAGTGTTCTGGGACAAGTCATCTCCTGAGGA...CTCCCACGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| CDS-3UTR CAA 90 bp | GGGCTGAGAGCTCTGCGCCTTGGACTGCTCCCGCTCCAGTTCCTCTGCGAGGCCGAGGCCGTCTTCATTTaGTCATTGTTAACTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: GLRALRLGLLPLQFLCEAEAVFI*SLLTSA Trigger: AGCTGAAGTTAACAATGACAAAATGAAGACGGCCTC...GGCCTCGCAGAGGAACTGGAGCGGGAGCAGTCCAAGGCGCAGAGCTCTCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161762.4 |
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| CDS-3UTR CAA 90 bp | TCAAGGGTGGAGAGGGACAGCACTGTAACACCAGGAGCAGAGTTCCTTAGGCGCTCCTGGAGATTGCTATaGCTCAGGAGCACCTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: SRVERDSTVTPGAEFLRRSWRLL*LRSTCS Trigger: CGAGCAGGTGCTCCTGAGCAATAGCAATCTCCAGGA...GCGCCTAAGGAACTCTGCTCCTGGTGTTACAGTGCTGTCCCTCTCCACCCTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
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| CDS-3UTR CAA 90 bp | CGCATCCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTCAATCCTTGGTCTCCTCAGGAGATGACTaGTCCCAGAACACTGCCACA | + |
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Preference number: 5 (lower is better) Translates to: RIHPLPLTLRDRSPQSLVSSGDD*SQNTAT Trigger: TGTGGCAGTGTTCTGGGACAAGTCATCTCCTGAGGA...GACCAAGGATTGAGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGGATGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| CDS-3UTR CAA 90 bp | AAGCCTCTCCCTGTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGTCAAAGTTTGGCTTCTaGCCAGTGACACGGACTGAG | + |
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Preference number: 5 (lower is better) Translates to: KPLPVSVFRAPESRGGRRSKFGF*PVTRTE Trigger: CTCAGTCCGTGTCACTGGCAAGAAGCCAAACTTTGA...CCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCACAGGGAGAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| CDS-3UTR CAA 90 bp | GTGAGTGTTTTCAGAGCGCCTGAATCCAGAGGTGGGAGGAGGCCGTGGGAGGAGGAGGCCGTCTTCATTTaGTCATTGTTAACTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VSVFRAPESRGGRRPWEEEAVFI*SLLTSA Trigger: AGCTGAAGTTAACAATGACAAAATGAAGACGGCCTC...CTCCTCCCACGGCCTCCTCCCACCTCTGGATTCAGGCGCTCTGAAAACACTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034233.15 ENSMUST00000162538.9 |
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| CDS-3UTR CAA 90 bp | CGCATCCACCCTCTTCCCCTAACACTAAGAGACAGGTCCCCTCAATCCTTGGTCTCAAAGTTTGGCTTCTaGCCAGTGACACGGACTGAG | + |
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Preference number: 5 (lower is better) Translates to: RIHPLPLTLRDRSPQSLVSKFGF*PVTRTE Trigger: CTCAGTCCGTGTCACTGGCAAGAAGCCAAACTTTGA...GACCAAGGATTGAGGGGACCTGTCTCTTAGTGTTAGGGGAAGAGGGTGGATGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034233.15 ENSMUST00000161792.9 ENSMUST00000162538.9 |
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| CDS-3UTR CAA 90 bp | ATGCTTCAGCTCCAAGACCCCTTAAGGCCCAGCTGTCACCAAAGCCCAGGAAAGTCAAAGTTTGGCTTCTaGCCAGTGACACGGACTGAG | + |
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Preference number: 5 (lower is better) Translates to: MLQLQDPLRPSCHQSPGKSKFGF*PVTRTE Trigger: CTCAGTCCGTGTCACTGGCAAGAAGCCAAACTTTGA...CTTTCCTGGGCTTTGGTGACAGCTGGGCCTTAAGGGGTCTTGGAGCTGAAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162538.9 |
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| CDS-3UTR CAA 90 bp | GCTCGCTCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCAGAGCGCCTGAAGAGGCCGTCTTCATTTaGTCATTGTTAAACTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: ARSLGCKPLPVSVFRAPEEAVFI*SLLNCN Trigger: GTTGCAGTTTAACAATGACAAAATGAAGACGGCCTC...TTCAGGCGCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161792.9 |
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| CDS-3UTR CAA 90 bp | CAGCTTCGCTCGCTCGCTCGGCTGCAAGCCTCTCCCTGTGAGTGTTTTCAGAGCGTCTTCATTTTGTCATaGTTAAACTGCAACAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: QLRSLARLQASPCECFQSVFILS*LNCNSW Trigger: CCAGCTGTTGCAGTTTAACAATGACAAAATGAAGAC...GCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGAGCGAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161792.9 |
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| CDS GCA 72 bp | GCTCTGCGCCTTGGACTGCTCCCGCTCCAGTTCCTCTaGGAGGCCACAGGTGCACACTGTCATCCTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: ALRLGLLPLQFL*EATGAHCHPPC Trigger: ACATGGAGGATGACAGTGTGCACCTGTGGCCTCGCAGAGGAACTGGAGCGGGAGCAGTCCAAGGCGCAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162357.2 |
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| CDS CCA 72 bp | GCCGTCTTCATTTTGTCATTGTTAAACTGCAACAGCTaGGTGACGTTTTCCATGAATACCTGGCCCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: AVFILSLLNCNS*VTFSMNTWPSL Trigger: CAGCGAGGGCCAGGTATTCATGGAAAACGTCACCCAGCTGTTGCAGTTTAACAATGACAAAATGAAGACGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161792.9 |
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| CDS CAA 90 bp | AGAGTCAGGGCTGAACATAGCTTAGAGGCCGTCTTCATTTTGTCATaGTTAAACTGCAACAGCTGGGTGACGTTTTCCATGAATACCTGG | + |
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Preference number: 6 (lower is better) Translates to: RVRAEHSLEAVFILS*LNCNSWVTFSMNTW Trigger: CCAGGTATTCATGGAAAACGTCACCCAGCTGTTGCAGTTTAACAATGACAAAATGAAGACGGCCTCTAAGCTATGTTCAGCCCTGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161792.9 |
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| CDS CAA 72 bp | GTCAGGGCTGAACATAGCTTAGAGGCCGTCTTCATTTaGTCATTGTTAAACTGCAACAGCTGGGTGACGTTT | + |
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Preference number: 6 (lower is better) Translates to: VRAEHSLEAVFI*SLLNCNSWVTF Trigger: AAACGTCACCCAGCTGTTGCAGTTTAACAATGACAAAATGAAGACGGCCTCTAAGCTATGTTCAGCCCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161792.9 |
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| CDS CAA 72 bp | GCTGAACATAGCTTAGAGGCCGTCTTCATTTTGTCATaGTTAAACTGCAACAGCTGGGTGACGTTTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: AEHSLEAVFILS*LNCNSWVTFSM Trigger: CATGGAAAACGTCACCCAGCTGTTGCAGTTTAACAATGACAAAATGAAGACGGCCTCTAAGCTATGTTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161792.9 |
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